-
1
-
-
0035887251
-
Dynamic expression and essential functions of Hes7 in somite segmentation
-
Bessho, Y., Sakata, R., Komatsu, S., Shiota, K., Yamada, S. and Kageyama, R. (2001). Dynamic expression and essential functions of Hes7 in somite segmentation. Genes Dev. 15, 2642-2647
-
(2001)
Genes Dev
, vol.15
, pp. 2642-2647
-
-
Bessho, Y.1
Sakata, R.2
Komatsu, S.3
Shiota, K.4
Yamada, S.5
Kageyama, R.6
-
2
-
-
0038046204
-
Periodic repression by the bHLH factor Hes7 is an essential mechanism for the somite segmentation clock
-
Bessho, Y., Hirata, H., Masamizu, Y. and Kageyama, R. (2003). Periodic repression by the bHLH factor Hes7 is an essential mechanism for the somite segmentation clock. Genes Dev. 17, 1451-1456
-
(2003)
Genes Dev
, vol.17
, pp. 1451-1456
-
-
Bessho, Y.1
Hirata, H.2
Masamizu, Y.3
Kageyama, R.4
-
3
-
-
70350743147
-
Expression of the oscillating gene her1 is directly regulated by Hairy/Enhancer of Split, T-box and Suppressor of Hairless proteins in the zebrafish segmentation clock
-
Brend, T. and Holley, S. A. (2009). Expression of the oscillating gene her1 is directly regulated by Hairy/Enhancer of Split, T-box and Suppressor of Hairless proteins in the zebrafish segmentation clock. Dev. Dyn. 238, 2745-2759
-
(2009)
Dev. Dyn
, vol.238
, pp. 2745-2759
-
-
Brend, T.1
Holley, S.A.2
-
4
-
-
33847316015
-
Repressor dimerization in the zebrafish somitogenesis clock
-
Cinquin, O. (2007). Repressor dimerization in the zebrafish somitogenesis clock. PLoS Comput. Biol. 3, e32.
-
(2007)
PLoS Comput. Biol
, vol.3
-
-
Cinquin, O.1
-
5
-
-
33847290930
-
Generalized, switch-like competitive heterodimerization networks
-
Cinquin, O. and Page, K. M. (2007). Generalized, switch-like competitive heterodimerization networks. Bull. Math. Biol. 69, 483-494
-
(2007)
Bull. Math. Biol
, vol.69
, pp. 483-494
-
-
Cinquin, O.1
Page, K.M.2
-
6
-
-
0036332950
-
Axial skeletal defects caused by mutation in the spondylocostal dysplasia/pudgy gene Dll3 are associated with disruption of the segmentation clock within the presomitic mesoderm
-
Dunwoodie, S. L., Clements, M., Sparrow, D. B., Sa, X., Conlon, R. A. and Beddington, R. S. (2002). Axial skeletal defects caused by mutation in the spondylocostal dysplasia/pudgy gene Dll3 are associated with disruption of the segmentation clock within the presomitic mesoderm. Development 129, 1795-1806
-
(2002)
Development
, vol.129
, pp. 1795-1806
-
-
Dunwoodie, S.L.1
Clements, M.2
Sparrow, D.B.3
Sa, X.4
Conlon, R.A.5
Beddington, R.S.6
-
7
-
-
34547922380
-
Delta-Notch-and then? Protein interactions and proposed modes of repression by Hes and Hey bHLH factors
-
Fischer, A. and Gessler, M. (2007). Delta-Notch-and then? Protein interactions and proposed modes of repression by Hes and Hey bHLH factors. Nucleic Acids Res. 35, 4583-4596
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 4583-4596
-
-
Fischer, A.1
Gessler, M.2
-
8
-
-
0030010697
-
The WRPW motif of the hairyrelated basic helix-loop-helix repressor proteins acts as a 4 amino acid transcription repression and protein-protein interaction domain
-
Fisher, A. L., Ohsako, S. and Caudy, M. (1996). The WRPW motif of the hairyrelated basic helix-loop-helix repressor proteins acts as a 4 amino acid transcription repression and protein-protein interaction domain. Mol. Cell. Biol. 16, 2670-2677
-
(1996)
Mol. Cell. Biol
, vol.16
, pp. 2670-2677
-
-
Fisher, A.L.1
Ohsako, S.2
Caudy, M.3
-
9
-
-
0042673755
-
Anterior and posterior waves of cyclic her1 gene expression are differentially regulated in the presomitic mesoderm of zebrafish
-
Gajewski, M., Sieger, D., Alt, B., Leve, C., Hans, S., Wolff, C., Rohr, K. B. and Tautz, D. (2003). Anterior and posterior waves of cyclic her1 gene expression are differentially regulated in the presomitic mesoderm of zebrafish. Development 130, 4269-4278
-
(2003)
Development
, vol.130
, pp. 4269-4278
-
-
Gajewski, M.1
Sieger, D.2
Alt, B.3
Leve, C.4
Hans, S.5
Wolff, C.6
Rohr, K.B.7
Tautz, D.8
-
10
-
-
33646695491
-
Comparative analysis of her genes during fish somitogenesis suggests a mouse/chick-like mode of oscillation in medaka
-
Gajewski, M., Elmasri, H., Girschick, M., Sieger, D. and Winkler, C. (2006). Comparative analysis of her genes during fish somitogenesis suggests a mouse/chick-like mode of oscillation in medaka. Dev. Genes Evol. 216, 315-332
-
(2006)
Dev. Genes Evol
, vol.216
, pp. 315-332
-
-
Gajewski, M.1
Elmasri, H.2
Girschick, M.3
Sieger, D.4
Winkler, C.5
-
11
-
-
67650594823
-
A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors
-
Grove, C. A., De Masi, F., Barrasa, M. I., Newburger, D. E., Alkema, M. J., Bulyk, M. L. and Walhout, A. J. (2009). A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factors. Cell 138, 314-327
-
(2009)
Cell
, vol.138
, pp. 314-327
-
-
Grove, C.A.1
de Masi, F.2
Barrasa, M.I.3
Newburger, D.E.4
Alkema, M.J.5
Bulyk, M.L.6
Walhout, A.J.7
-
12
-
-
0036679340
-
Two linked hairy/Enhancer of split-related zebrafish genes, her1 and her7, function together to refine alternating somite boundaries
-
Henry, C. A., Urban, M. K., Dill, K. K., Merlie, J. P., Page, M. F., Kimmel, C. B. and Amacher, S. L. (2002). Two linked hairy/Enhancer of split-related zebrafish genes, her1 and her7, function together to refine alternating somite boundaries. Development 129, 3693-3704
-
(2002)
Development
, vol.129
, pp. 3693-3704
-
-
Henry, C.A.1
Urban, M.K.2
Dill, K.K.3
Merlie, J.P.4
Page, M.F.5
Kimmel, C.B.6
Amacher, S.L.7
-
13
-
-
0037174669
-
Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop
-
Hirata, H., Yoshiura, S., Ohtsuka, T., Bessho, Y., Harada, T., Yoshikawa, K. and Kageyama, R. (2002). Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop. Science 298, 840-843
-
(2002)
Science
, vol.298
, pp. 840-843
-
-
Hirata, H.1
Yoshiura, S.2
Ohtsuka, T.3
Bessho, Y.4
Harada, T.5
Yoshikawa, K.6
Kageyama, R.7
-
14
-
-
3042842911
-
Instability of Hes7 protein is crucial for the somite segmentation clock
-
Hirata, H., Bessho, Y., Kokubu, H., Masamizu, Y., Yamada, S., Lewis, J. and Kageyama, R. (2004). Instability of Hes7 protein is crucial for the somite segmentation clock. Nat. Genet. 36, 750-754
-
(2004)
Nat. Genet
, vol.36
, pp. 750-754
-
-
Hirata, H.1
Bessho, Y.2
Kokubu, H.3
Masamizu, Y.4
Yamada, S.5
Lewis, J.6
Kageyama, R.7
-
15
-
-
0034234968
-
Control of her1 expression during zebrafish somitogenesis by a Delta-dependent oscillator and an independent wave-front activity
-
Holley, S. A., Geisler, R. and Nüsslein-Volhard, C. (2000). Control of her1 expression during zebrafish somitogenesis by a Delta-dependent oscillator and an independent wave-front activity. Genes Dev. 14, 1678-1690
-
(2000)
Genes Dev
, vol.14
, pp. 1678-1690
-
-
Holley, S.A.1
Geisler, R.2
Nüsslein-Volhard, C.3
-
16
-
-
0036332729
-
Her1 and the notch pathway function within the oscillator mechanism that regulates zebrafish somitogenesis
-
Holley, S. A., Jülich, D., Rauch, G. J., Geisler, R. and Nüsslein-Volhard, C. (2002). Her1 and the notch pathway function within the oscillator mechanism that regulates zebrafish somitogenesis. Development 129, 1175-1183
-
(2002)
Development
, vol.129
, pp. 1175-1183
-
-
Holley, S.A.1
Jülich, D.2
Rauch, G.J.3
Geisler, R.4
Nüsslein-Volhard, C.5
-
17
-
-
77952171393
-
Emergence of traveling waves in the zebrafish segmentation clock
-
Ishimatsu, K., Takamatsu, A. and Takeda, H. (2010). Emergence of traveling waves in the zebrafish segmentation clock. Development 137, 1595-1599
-
(2010)
Development
, vol.137
, pp. 1595-1599
-
-
Ishimatsu, K.1
Takamatsu, A.2
Takeda, H.3
-
18
-
-
0033063050
-
Target specificities of Drosophila enhancer of split basic helix-loop-helix proteins
-
Jennings, B. H., Tyler, D. M. and Bray, S. J. (1999). Target specificities of Drosophila enhancer of split basic helix-loop-helix proteins. Mol. Cell. Biol. 19, 4600-4610
-
(1999)
Mol. Cell. Biol
, vol.19
, pp. 4600-4610
-
-
Jennings, B.H.1
Tyler, D.M.2
Bray, S.J.3
-
19
-
-
0034098483
-
Notch signalling is required for cyclic expression of the hairy-like gene HES1 in the presomitic mesoderm
-
Jouve, C., Palmeirim, I., Henrique, D., Beckers, J., Gossler, A., Ish Horowicz, D. and Pourquié, O. (2000). Notch signalling is required for cyclic expression of the hairy-like gene HES1 in the presomitic mesoderm. Development 127, 1421-1429
-
(2000)
Development
, vol.127
, pp. 1421-1429
-
-
Jouve, C.1
Palmeirim, I.2
Henrique, D.3
Beckers, J.4
Gossler, A.5
Ish Horowicz, D.6
Pourquié, O.7
-
20
-
-
34248139757
-
The Hes gene family: Repressors and oscillators that orchestrate embryogenesis
-
Kageyama, R., Ohtsuka, T. and Kobayashi, T. (2007). The Hes gene family: repressors and oscillators that orchestrate embryogenesis. Development 134, 1243-1251
-
(2007)
Development
, vol.134
, pp. 1243-1251
-
-
Kageyama, R.1
Ohtsuka, T.2
Kobayashi, T.3
-
21
-
-
40949101777
-
Quantitative assessment of the knockdown efficiency of morpholino antisense oligonucleotides in zebrafish embryos using a luciferase assay
-
Kamachi, Y., Okuda, Y. and Kondoh, H. (2008). Quantitative assessment of the knockdown efficiency of morpholino antisense oligonucleotides in zebrafish embryos using a luciferase assay. Genesis 46, 1-7
-
(2008)
Genesis
, vol.46
, pp. 1-7
-
-
Kamachi, Y.1
Okuda, Y.2
Kondoh, H.3
-
22
-
-
18844427286
-
Zebrafish hairy/enhancer of split protein links FGF signaling to cyclic gene expression in the periodic segmentation of somites
-
Kawamura, A., Koshida, S., Hijikata, H., Sakaguchi, T., Kondoh, H. and Takada, S. (2005). Zebrafish hairy/enhancer of split protein links FGF signaling to cyclic gene expression in the periodic segmentation of somites. Genes Dev. 19, 1156-1161
-
(2005)
Genes Dev
, vol.19
, pp. 1156-1161
-
-
Kawamura, A.1
Koshida, S.2
Hijikata, H.3
Sakaguchi, T.4
Kondoh, H.5
Takada, S.6
-
23
-
-
79958080327
-
Evolutionary plasticity of segmentation clock networks
-
Krol, A. J., Roellig, D., Dequeant, M. L., Tassy, O., Glynn, E., Hattem, G., Mushegian, A., Oates, A. C. and Pourquie, O. (2011). Evolutionary plasticity of segmentation clock networks. Development 138, 2783-2792
-
(2011)
Development
, vol.138
, pp. 2783-2792
-
-
Krol, A.J.1
Roellig, D.2
Dequeant, M.L.3
Tassy, O.4
Glynn, E.5
Hattem, G.6
Mushegian, A.7
Oates, A.C.8
Pourquie, O.9
-
24
-
-
0041677612
-
Autoinhibition with transcriptional delay: A simple mechanism for the zebrafish somitogenesis oscillator
-
Lewis, J. (2003). Autoinhibition with transcriptional delay: a simple mechanism for the zebrafish somitogenesis oscillator. Curr. Biol. 13, 1398-1408
-
(2003)
Curr. Biol
, vol.13
, pp. 1398-1408
-
-
Lewis, J.1
-
25
-
-
0043180477
-
Oscillatory expression of Hes1, p53, and NF-kappaB driven by transcriptional time delays
-
Monk, N. A. (2003). Oscillatory expression of Hes1, p53, and NF-kappaB driven by transcriptional time delays. Curr. Biol. 13, 1409-1413
-
(2003)
Curr. Biol
, vol.13
, pp. 1409-1413
-
-
Monk, N.A.1
-
26
-
-
84856730414
-
-
Nüsslein-Volhard, C. and Dahm, R, Zebrafish. Oxford, UK: Oxford University Press
-
Nüsslein-Volhard, C. and Dahm, R. (eds) (2002). Zebrafish. Oxford, UK: Oxford University Press
-
(2002)
-
-
-
27
-
-
0035984002
-
Hairy/E(spl)-related (Her) genes are central components of the segmentation oscillator and display redundancy with the Delta/Notch signaling pathway in the formatoin of anterior segmental boundaries in the zebrafish
-
Oates, A. C. and Ho, R. K. (2002). Hairy/E(spl)-related (Her) genes are central components of the segmentation oscillator and display redundancy with the Delta/Notch signaling pathway in the formatoin of anterior segmental boundaries in the zebrafish. Development 129, 2929-2946
-
(2002)
Development
, vol.129
, pp. 2929-2946
-
-
Oates, A.C.1
Ho, R.K.2
-
28
-
-
0030840351
-
Avian hairy gene expression identifies a molecular clock linked to vertebrate segmentation and somitogenesis
-
Palmeirim, I., Henrique, D., Ish-Horowicz, D. and Pourquié, O. (1997). Avian hairy gene expression identifies a molecular clock linked to vertebrate segmentation and somitogenesis. Cell 91, 639-648
-
(1997)
Cell
, vol.91
, pp. 639-648
-
-
Palmeirim, I.1
Henrique, D.2
Ish-Horowicz, D.3
Pourquié, O.4
-
29
-
-
0028170530
-
Groucho is required for Drosophila neurogenesis, segmentation, and sex determination and interacts directly with Hairy-related bHLH proteins
-
Paroush, Z., Finley, R. L., Kidd, T., Wainwright, S. M., Ingham, P. L., Brent, R. and Ish-Horowicz, D. (1994). Groucho is required for Drosophila neurogenesis, segmentation, and sex determination and interacts directly with Hairy-related bHLH proteins. Cell 79, 805-815
-
(1994)
Cell
, vol.79
, pp. 805-815
-
-
Paroush, Z.1
Finley, R.L.2
Kidd, T.3
Wainwright, S.M.4
Ingham, P.L.5
Brent, R.6
Ish-Horowicz, D.7
-
30
-
-
4644278601
-
Transcriptional repression by the bHLH-Orange factor XHRT1 does not involve the C-terminal YRPW motif
-
Pichon, B., Taelman, V., Bellefroid, E. J. and Christophe, D. (2004). Transcriptional repression by the bHLH-Orange factor XHRT1 does not involve the C-terminal YRPW motif. Biochim. Biophys. Acta 1680, 46-52
-
(2004)
Biochim. Biophys. Acta
, vol.1680
, pp. 46-52
-
-
Pichon, B.1
Taelman, V.2
Bellefroid, E.J.3
Christophe, D.4
-
31
-
-
79957580977
-
Vertebrate segmentation: From cyclic gene networks to scoliosis
-
Pourquié, O. (2011). Vertebrate segmentation: from cyclic gene networks to scoliosis. Cell 145, 650-663
-
(2011)
Cell
, vol.145
, pp. 650-663
-
-
Pourquié, O.1
-
32
-
-
0000994551
-
Sensitivity analysis in chemical kinetics
-
Rabitz, H., Kramer, M. and Dacol, D. (1983). Sensitivity analysis in chemical kinetics. Annu. Rev. Phys. Chem. 34, 419-461
-
(1983)
Annu. Rev. Phys. Chem
, vol.34
, pp. 419-461
-
-
Rabitz, H.1
Kramer, M.2
Dacol, D.3
-
33
-
-
48049097290
-
Visualizing protein interactions by bimolecular fluorescence complementation in Xenopus
-
Saka, Y., Hagemann, A. I. and Smith, J. C. (2008). Visualizing protein interactions by bimolecular fluorescence complementation in Xenopus. Methods 45, 192-195
-
(2008)
Methods
, vol.45
, pp. 192-195
-
-
Saka, Y.1
Hagemann, A.I.2
Smith, J.C.3
-
34
-
-
0034090969
-
Zebrafish Mesp family genes, mesp a and mesp b are segmentally expressed in the presomitic mesoderm, Mesp b confers the anterior identity to the developing somites
-
Sawada, A., Fritz, A., Jiang, Y.-J., Yamamoto, A., Yamasu, K., Kuroiwa, A., Saga, Y. and Takeda, H. (2000). Zebrafish Mesp family genes, mesp a and mesp b are segmentally expressed in the presomitic mesoderm, Mesp b confers the anterior identity to the developing somites. Development 127, 1691-1702
-
(2000)
Development
, vol.127
, pp. 1691-1702
-
-
Sawada, A.1
Fritz, A.2
Jiang, Y.-J.3
Yamamoto, A.4
Yamasu, K.5
Kuroiwa, A.6
Saga, Y.7
Takeda, H.8
-
35
-
-
79957538412
-
Segment number and axial identity in a segmentation clock period mutant
-
Schroter, C. and Oates, A. C. (2010). Segment number and axial identity in a segmentation clock period mutant. Curr. Biol. 20, 1254-1258
-
(2010)
Curr. Biol
, vol.20
, pp. 1254-1258
-
-
Schroter, C.1
Oates, A.C.2
-
36
-
-
34047139349
-
Completing the set of h/E(spl) cyclic genes in zebrafish: Her12 and her15 reveal novel modes of expression and contribute to the segmentation clock
-
Shankaran, S. S., Sieger, D., Schroter, C., Czepe, C., Pauly, M. C., Laplante, M. A., Becker, T. S., Oates, A. C. and Gajewski, M. (2007). Completing the set of h/E(spl) cyclic genes in zebrafish: her12 and her15 reveal novel modes of expression and contribute to the segmentation clock. Dev. Biol. 304, 615-632
-
(2007)
Dev. Biol
, vol.304
, pp. 615-632
-
-
Shankaran, S.S.1
Sieger, D.2
Schroter, C.3
Czepe, C.4
Pauly, M.C.5
Laplante, M.A.6
Becker, T.S.7
Oates, A.C.8
Gajewski, M.9
-
37
-
-
4544286523
-
Her11 is involved in the somitogenesis clock in zebrafish
-
Sieger, D., Tautz, D. and Gajewski, M. (2004). Her11 is involved in the somitogenesis clock in zebrafish. Dev. Genes Evol. 214, 393-406
-
(2004)
Dev. Genes Evol
, vol.214
, pp. 393-406
-
-
Sieger, D.1
Tautz, D.2
Gajewski, M.3
-
38
-
-
33646035816
-
Her1 and her13.2 are jointly required for somitic border specification along the entire axis of the fish embryo
-
Sieger, D., Ackermann, B., Winkler, C., Tautz, D. and Gajewski, M. (2006). Her1 and her13.2 are jointly required for somitic border specification along the entire axis of the fish embryo. Dev. Biol. 293, 242-251
-
(2006)
Dev. Biol
, vol.293
, pp. 242-251
-
-
Sieger, D.1
Ackermann, B.2
Winkler, C.3
Tautz, D.4
Gajewski, M.5
-
39
-
-
56049123626
-
Mutation of HAIRY-AND-ENHANCER-OF-SPLIT-7 in humans causes spondylocostal dysostosis
-
Sparrow, D. B., Guillen-Navarro, E., Fatkin, D. and Dunwoodie, S. L. (2008). Mutation of HAIRY-AND-ENHANCER-OF-SPLIT-7 in humans causes spondylocostal dysostosis. Hum. Mol. Genet. 17, 3761-3766
-
(2008)
Hum. Mol. Genet
, vol.17
, pp. 3761-3766
-
-
Sparrow, D.B.1
Guillen-Navarro, E.2
Fatkin, D.3
Dunwoodie, S.L.4
-
40
-
-
77952674210
-
Two novel missense mutations in HAIRY-ANDENHANCER-OF-SPLIT-7 in a family with spondylocostal dysostosis
-
Sparrow, D. B., Sillence, D., Wouters, M. A., Turnpenny, P. D. and Dunwoodie, S. L. (2010). Two novel missense mutations in HAIRY-ANDENHANCER-OF-SPLIT-7 in a family with spondylocostal dysostosis. Eur. J. Hum. Genet. 18, 674-679
-
(2010)
Eur. J. Hum. Genet
, vol.18
, pp. 674-679
-
-
Sparrow, D.B.1
Sillence, D.2
Wouters, M.A.3
Turnpenny, P.D.4
Dunwoodie, S.L.5
-
41
-
-
79952766407
-
Intronic delay is essential for oscillatory expression in the segmentation clock
-
Takashima, Y., Ohtsuka, T., Gonzalez, A., Miyachi, H. and Kageyama, R. (2011). Intronic delay is essential for oscillatory expression in the segmentation clock. Proc. Natl. Acad. Sci. USA 108, 3300-3305
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 3300-3305
-
-
Takashima, Y.1
Ohtsuka, T.2
Gonzalez, A.3
Miyachi, H.4
Kageyama, R.5
-
42
-
-
34247125714
-
Identification of oscillatory genes in somitogenesis from functional genomic analysis of a human mesenchymal stem cell model
-
William, D. A., Saitta, B., Gibson, J. D., Traas, J., Markov, V., Gonzalez, D. M., Sewell, W., Anderson, D. M., Pratt, S. C., Rappaport, E. F. et al. (2007). Identification of oscillatory genes in somitogenesis from functional genomic analysis of a human mesenchymal stem cell model. Dev. Biol. 305, 172-186.
-
(2007)
Dev. Biol
, vol.305
, pp. 172-186
-
-
William, D.A.1
Saitta, B.2
Gibson, J.D.3
Traas, J.4
Markov, V.5
Gonzalez, D.M.6
Sewell, W.7
Anderson, D.M.8
Pratt, S.C.9
Rappaport, E.F.10
|