메뉴 건너뛰기




Volumn 26, Issue 9-10, 2015, Pages 511-520

Collaborative Cross and Diversity Outbred data resources in the Mouse Phenome Database

Author keywords

[No Author keywords available]

Indexed keywords

DATA ANALYSIS; DATA ANALYSIS SOFTWARE; GENETIC CROSS; GENETIC DATABASE; GENETIC VARIABILITY; HYBRID; INBRED STRAIN; META ANALYSIS (TOPIC); MOUSE; NONHUMAN; OUTBRED MOUSE STRAIN; PHENOTYPE; REVIEW; ANIMAL; GENETIC VARIATION; GENETICS; GENOTYPE; INBRED MOUSE STRAIN;

EID: 84943816845     PISSN: 09388990     EISSN: 14321777     Source Type: Journal    
DOI: 10.1007/s00335-015-9595-6     Document Type: Review
Times cited : (68)

References (48)
  • 1
  • 3
    • 0037027761 scopus 로고    scopus 로고
    • Comparative genomics: the mouse that roared
    • COI: 1:CAS:528:DC%2BD38Xpt1Whsrc%3D, PID: 12466847
    • Boguski MS (2002) Comparative genomics: the mouse that roared. Nature 420:515–516
    • (2002) Nature , vol.420 , pp. 515-516
    • Boguski, M.S.1
  • 4
    • 84867337003 scopus 로고    scopus 로고
    • The international mouse phenotyping consortium: past and future perspectives on mouse phenotyping
    • COI: 1:CAS:528:DC%2BC38XhsVKrt77M, PID: 22940749
    • Brown SD, Moore MW (2012) The international mouse phenotyping consortium: past and future perspectives on mouse phenotyping. Mamm Genome 23:632–640
    • (2012) Mamm Genome , vol.23 , pp. 632-640
    • Brown, S.D.1    Moore, M.W.2
  • 5
    • 84905668351 scopus 로고    scopus 로고
    • Identification of a QTL in Mus musculus for alcohol preference, withdrawal, and Ap3m2 expression using integrative functional genomics and precision genetics
    • PID: 24923803
    • Bubier JA, Jay JJ, Baker CL, Bergeson SE, Ohno H, Metten P, Crabbe JC, Chesler EJ (2014) Identification of a QTL in Mus musculus for alcohol preference, withdrawal, and Ap3m2 expression using integrative functional genomics and precision genetics. Genetics 197:1377–1393
    • (2014) Genetics , vol.197 , pp. 1377-1393
    • Bubier, J.A.1    Jay, J.J.2    Baker, C.L.3    Bergeson, S.E.4    Ohno, H.5    Metten, P.6    Crabbe, J.C.7    Chesler, E.J.8
  • 6
    • 61849106435 scopus 로고    scopus 로고
    • Practical applications of the bioinformatics toolbox for narrowing quantitative trait loci
    • PID: 18845850
    • Burgess-Herbert SL, Cox A, Tsaih SW, Paigen B (2008) Practical applications of the bioinformatics toolbox for narrowing quantitative trait loci. Genetics 180:2227–2235
    • (2008) Genetics , vol.180 , pp. 2227-2235
    • Burgess-Herbert, S.L.1    Cox, A.2    Tsaih, S.W.3    Paigen, B.4
  • 7
    • 84863115856 scopus 로고    scopus 로고
    • The genome architecture of the collaborative cross mouse genetic reference population
    • CCC (2012) The genome architecture of the collaborative cross mouse genetic reference population. Genetics 190:389–401
    • (2012) Genetics , vol.190 , pp. 389-401
  • 8
    • 84895866508 scopus 로고    scopus 로고
    • Out of the bottleneck: the diversity outcross and collaborative cross mouse populations in behavioral genetics research
    • PID: 24272351
    • Chesler EJ (2013) Out of the bottleneck: the diversity outcross and collaborative cross mouse populations in behavioral genetics research. Mamm Genome 25:3–11
    • (2013) Mamm Genome , vol.25 , pp. 3-11
    • Chesler, E.J.1
  • 14
    • 84943813927 scopus 로고    scopus 로고
    • Hematological parameters in 8 inbred founder strains and 130 + emerging lines (pre-CC) of the Collaborative Cross. MPD: Collins1
    • Bar Harbor, Maine USA
    • Collins FS (2012) Hematological parameters in 8 inbred founder strains and 130 + emerging lines (pre-CC) of the Collaborative Cross. MPD: Collins1, Mouse Phenome Datbase (phenome.jax.org), Bar Harbor, Maine USA
    • (2012) Mouse Phenome Datbase (phenome.jax.org)
    • Collins, F.S.1
  • 15
    • 0032714352 scopus 로고    scopus 로고
    • Genomic control for association studies
    • COI: 1:STN:280:DC%2BD3M3itFSqtA%3D%3D, PID: 11315092
    • Devlin B, Roeder K (1999) Genomic control for association studies. Biometrics 55:997–1004
    • (1999) Biometrics , vol.55 , pp. 997-1004
    • Devlin, B.1    Roeder, K.2
  • 16
    • 84930088305 scopus 로고    scopus 로고
    • Melanoma susceptibility as a complex trait: genetic variation controls all stages of tumor progression
    • COI: 1:CAS:528:DC%2BC2cXht1Gqt7bJ, PID: 25088201
    • Ferguson B, Ram R, Handoko HY, Mukhopadhyay P, Muller HK, Soyer HP, Morahan G, Walker GJ (2015) Melanoma susceptibility as a complex trait: genetic variation controls all stages of tumor progression. Oncogene 34:2879–2886
    • (2015) Oncogene , vol.34 , pp. 2879-2886
    • Ferguson, B.1    Ram, R.2    Handoko, H.Y.3    Mukhopadhyay, P.4    Muller, H.K.5    Soyer, H.P.6    Morahan, G.7    Walker, G.J.8
  • 22
    • 84891797984 scopus 로고    scopus 로고
    • Mouse phenome database
    • COI: 1:CAS:528:DC%2BC2cXoslWj, PID: 24243846
    • Grubb SC, Bult CJ, Bogue MA (2014) Mouse phenome database. Nucleic Acids Res 42:D825–D834
    • (2014) Nucleic Acids Res , vol.42 , pp. 825-834
    • Grubb, S.C.1    Bult, C.J.2    Bogue, M.A.3
  • 23
    • 52549130734 scopus 로고    scopus 로고
    • The collaborative cross, developing a resource for mammalian systems genetics: a status report of the Wellcome Trust cohort
    • PID: 18521666
    • Iraqi FA, Churchill G, Mott R (2008) The collaborative cross, developing a resource for mammalian systems genetics: a status report of the Wellcome Trust cohort. Mamm Genome 19:379–381
    • (2008) Mamm Genome , vol.19 , pp. 379-381
    • Iraqi, F.A.1    Churchill, G.2    Mott, R.3
  • 24
    • 84896739351 scopus 로고    scopus 로고
    • Meta-analysis identifies gene-by-environment interactions as demonstrated in a study of 4965 mice
    • PID: 24415945
    • Kang EY, Han B, Furlotte N, Joo JW, Shih D, Davis RC, Lusis AJ, Eskin E (2014) Meta-analysis identifies gene-by-environment interactions as demonstrated in a study of 4965 mice. PLoS Genet 10:e1004022
    • (2014) PLoS Genet , vol.10 , pp. 1004022
    • Kang, E.Y.1    Han, B.2    Furlotte, N.3    Joo, J.W.4    Shih, D.5    Davis, R.C.6    Lusis, A.J.7    Eskin, E.8
  • 28
    • 84943819363 scopus 로고    scopus 로고
    • Behavioral and nociception traits in a diversity outbred (DO) mouse population and 8 founder inbred strains. MPD:Chesler4
    • Bar Harbor, Maine USA
    • Logan RW, Robledo RF, Recla JM, Chesler EJ (2013a) Behavioral and nociception traits in a diversity outbred (DO) mouse population and 8 founder inbred strains. MPD:Chesler4, Mouse Phenome Database (phenome.jax.org), Bar Harbor, Maine USA
    • (2013) Mouse Phenome Database (phenome.jax.org)
    • Logan, R.W.1    Robledo, R.F.2    Recla, J.M.3    Chesler, E.J.4
  • 30
    • 84943820952 scopus 로고    scopus 로고
    • Informatics resources for the collaborative cross and related mouse populations
    • Morgan AP, Welsh CE (2015) Informatics resources for the collaborative cross and related mouse populations. Mamm Genome
    • (2015) Mamm Genome
    • Morgan, A.P.1    Welsh, C.E.2
  • 31
    • 52549101134 scopus 로고    scopus 로고
    • Establishment of "The Gene Mine": a resource for rapid identification of complex trait genes
    • PID: 18716834
    • Morahan G, Balmer L, Monley D (2008) Establishment of "The Gene Mine": a resource for rapid identification of complex trait genes. Mamm Genome 19:390–393
    • (2008) Mamm Genome , vol.19 , pp. 390-393
    • Morahan, G.1    Balmer, L.2    Monley, D.3
  • 32
    • 0033852468 scopus 로고    scopus 로고
    • A mouse phenome project
    • COI: 1:STN:280:DC%2BD3cvlsV2ltg%3D%3D, PID: 10967127
    • Paigen K, Eppig JT (2000) A mouse phenome project. Mamm Genome 11:715–717
    • (2000) Mamm Genome , vol.11 , pp. 715-717
    • Paigen, K.1    Eppig, J.T.2
  • 36
    • 84902126970 scopus 로고    scopus 로고
    • Precise genetic mapping and integrative bioinformatics in diversity outbred mice reveals Hydin as a novel pain gene
    • COI: 1:CAS:528:DC%2BC2cXptVehtro%3D, PID: 24700285
    • Recla JM, Robledo RF, Gatti DM, Bult CJ, Churchill GA, Chesler EJ (2014) Precise genetic mapping and integrative bioinformatics in diversity outbred mice reveals Hydin as a novel pain gene. Mamm Genome 25:211–222
    • (2014) Mamm Genome , vol.25 , pp. 211-222
    • Recla, J.M.1    Robledo, R.F.2    Gatti, D.M.3    Bult, C.J.4    Churchill, G.A.5    Chesler, E.J.6
  • 38
    • 84964315530 scopus 로고    scopus 로고
    • High-resolution genetic mapping in the diversity outbred mouse population identifies Apobec1 as a candidate gene for atherosclerosis
    • Smallwood TL, Gatti DM, Quizon P, Weinstock GM, Jung KC, Zhao L, Hua K, Pomp D, Bennett BJ (2014) High-resolution genetic mapping in the diversity outbred mouse population identifies Apobec1 as a candidate gene for atherosclerosis. J Bethesda 4:2353–2363
    • (2014) J Bethesda , vol.4 , pp. 2353-2363
    • Smallwood, T.L.1    Gatti, D.M.2    Quizon, P.3    Weinstock, G.M.4    Jung, K.C.5    Zhao, L.6    Hua, K.7    Pomp, D.8    Bennett, B.J.9
  • 40
    • 84943815874 scopus 로고    scopus 로고
    • Multi-system survey of mouse physiology in 8 inbred founder strains and 54 F1 hybrids of the Collaborative Cross
    • Mouse Phenome Database (phenome.jax.org) Bar Harbor, Maine USA
    • Svenson KL, Lenarcic AB, Churchill GA, Valdar W (2012b) Multi-system survey of mouse physiology in 8 inbred founder strains and 54 F1 hybrids of the Collaborative Cross. MPD:CGDpheno3, Mouse Phenome Database (phenome.jax.org) Bar Harbor, Maine USA
    • (2012) MPD:CGDpheno3
    • Svenson, K.L.1    Lenarcic, A.B.2    Churchill, G.A.3    Valdar, W.4
  • 41
    • 84857433366 scopus 로고    scopus 로고
    • Ten years of the collaborative cross
    • PID: 22345604
    • Threadgill DW, Churchill GA (2012) Ten years of the collaborative cross. Genetics 190:291–294
    • (2012) Genetics , vol.190 , pp. 291-294
    • Threadgill, D.W.1    Churchill, G.A.2
  • 42
    • 0036215090 scopus 로고    scopus 로고
    • Genetic dissection of complex and quantitative traits: from fantasy to reality via a community effort
    • COI: 1:CAS:528:DC%2BD38XjtFymtrY%3D, PID: 11956758
    • Threadgill DW, Hunter KW, Williams RW (2002) Genetic dissection of complex and quantitative traits: from fantasy to reality via a community effort. Mamm Genome 13:175–178
    • (2002) Mamm Genome , vol.13 , pp. 175-178
    • Threadgill, D.W.1    Hunter, K.W.2    Williams, R.W.3
  • 43
    • 84964315839 scopus 로고    scopus 로고
    • Susceptibility to klebsiella pneumonaie infection in collaborative cross mice is a complex trait controlled by at least three loci acting at different time points
    • PID: 25283706
    • Vered K, Durrant C, Mott R, Iraqi FA (2014) Susceptibility to klebsiella pneumonaie infection in collaborative cross mice is a complex trait controlled by at least three loci acting at different time points. BMC Genomics 15:865
    • (2014) BMC Genomics , vol.15 , pp. 865
    • Vered, K.1    Durrant, C.2    Mott, R.3    Iraqi, F.A.4
  • 46
    • 84867337106 scopus 로고    scopus 로고
    • Next-generation sequencing of experimental mouse strains
    • COI: 1:CAS:528:DC%2BC38XhsVKrtrfO, PID: 22772437
    • Yalcin B, Adams DJ, Flint J, Keane TM (2012) Next-generation sequencing of experimental mouse strains. Mamm Genome 23:490–498
    • (2012) Mamm Genome , vol.23 , pp. 490-498
    • Yalcin, B.1    Adams, D.J.2    Flint, J.3    Keane, T.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.