메뉴 건너뛰기




Volumn 15, Issue 1, 2014, Pages 38-46

Using the emerging Collaborative Cross to probe the immune system

Author keywords

Collaborative Cross; Fc R; QTL

Indexed keywords

CD23 ANTIGEN; GLYCOPROTEIN P 15095;

EID: 84895886695     PISSN: 14664879     EISSN: 14765470     Source Type: Journal    
DOI: 10.1038/gene.2013.59     Document Type: Article
Times cited : (69)

References (47)
  • 1
    • 0033776589 scopus 로고    scopus 로고
    • Genetics of primary immunodeficiency diseases
    • Conley ME. Genetics of primary immunodeficiency diseases. Rev Immunogenet 2000; 2: 231-242
    • (2000) Rev Immunogenet , vol.2 , pp. 231-242
    • Conley, M.E.1
  • 2
    • 79959354208 scopus 로고    scopus 로고
    • The genetics of asthma and allergic disease: A 21st century perspective
    • Ober C, Yao TC. The genetics of asthma and allergic disease: A 21st century perspective. Immunol Rev 2011; 242: 10-30
    • (2011) Immunol Rev , vol.242 , pp. 10-30
    • Ober, C.1    Yao, T.C.2
  • 3
    • 77951926420 scopus 로고    scopus 로고
    • Etiology of type 1 diabetes
    • Todd JA. Etiology of type 1 diabetes. Immunity 2010; 32: 457-467
    • (2010) Immunity , vol.32 , pp. 457-467
    • Todd, J.A.1
  • 4
    • 84867743261 scopus 로고    scopus 로고
    • Genome-wide association studies in mice
    • Flint J, Eskin E. Genome-wide association studies in mice. Nat Rev Genet 2012; 13: 807-817
    • (2012) Nat Rev Genet , vol.13 , pp. 807-817
    • Flint, J.1    Eskin, E.2
  • 5
    • 84863115856 scopus 로고    scopus 로고
    • The genome architecture of the Collaborative Cross mouse genetic reference population
    • Collaborative Cross Consortium
    • Collaborative Cross Consortium. The genome architecture of the Collaborative Cross mouse genetic reference population. Genetics 2012; 190: 389-401
    • (2012) Genetics , vol.190 , pp. 389-401
  • 6
    • 14644441018 scopus 로고    scopus 로고
    • The Collaborative Cross, a community resource for the genetic analysis of complex traits
    • Churchill GA, Airey DC, Allayee H, Angel JM, Attie AD, Beatty J et al. The Collaborative Cross, a community resource for the genetic analysis of complex traits. Nat Genet 2004; 36: 1133-1137
    • (2004) Nat Genet , vol.36 , pp. 1133-1137
    • Churchill, G.A.1    Airey, D.C.2    Allayee, H.3    Angel, J.M.4    Attie, A.D.5    Beatty, J.6
  • 7
    • 0036215090 scopus 로고    scopus 로고
    • Genetic dissection of complex and quantitative traits: From fantasy to reality via a community effort
    • Threadgill DW, Hunter KW, Williams RW. Genetic dissection of complex and quantitative traits: From fantasy to reality via a community effort. Mamm Genome 2002; 13: 175-178
    • (2002) Mamm Genome , vol.13 , pp. 175-178
    • Threadgill, D.W.1    Hunter, K.W.2    Williams, R.W.3
  • 8
    • 15544364093 scopus 로고    scopus 로고
    • The genomes of recombinant inbred lines
    • Broman KW. The genomes of recombinant inbred lines. Genetics 2005; 169: 1133-1146
    • (2005) Genetics , vol.169 , pp. 1133-1146
    • Broman, K.W.1
  • 9
    • 34548423292 scopus 로고    scopus 로고
    • The polymorphism architecture of mouse genetic resources elucidated using genome-wide resequencing data: Implications for QTL discovery and systems genetics
    • Roberts A, Pardo-Manuel de Villena F, Wang W, McMillan L, Threadgill DW. The polymorphism architecture of mouse genetic resources elucidated using genome-wide resequencing data: Implications for QTL discovery and systems genetics. Mamm Genome 2007; 18: 473-481
    • (2007) Mamm Genome , vol.18 , pp. 473-481
    • Roberts, A.1    Pardo-Manuel De Villena, F.2    Wang, W.3    McMillan, L.4    Threadgill, D.W.5
  • 10
    • 52549103273 scopus 로고    scopus 로고
    • The Collaborative Cross at Oak Ridge National Laboratory: Developing a powerful resource for systems genetics
    • Chesler EJ, Miller DR, Branstetter LR, Galloway LD, Jackson BL, Philip VM et al. The Collaborative Cross at Oak Ridge National Laboratory: Developing a powerful resource for systems genetics. Mamm Genome 2008; 19: 382-389
    • (2008) Mamm Genome , vol.19 , pp. 382-389
    • Chesler, E.J.1    Miller, D.R.2    Branstetter, L.R.3    Galloway, L.D.4    Jackson, B.L.5    Philip, V.M.6
  • 11
    • 52549130734 scopus 로고    scopus 로고
    • The Collaborative Cross, developing a resource for mammalian systems genetics: A status report of the Wellcome Trust cohort
    • Iraqi FA, Churchill G, Mott R. The Collaborative Cross, developing a resource for mammalian systems genetics: A status report of the Wellcome Trust cohort. Mamm Genome 2008; 19: 379-381
    • (2008) Mamm Genome , vol.19 , pp. 379-381
    • Iraqi, F.A.1    Churchill, G.2    Mott, R.3
  • 12
    • 52549101134 scopus 로고    scopus 로고
    • Establishment of 'the gene mine' a resource for rapid identification of complex trait genes
    • Morahan G, Balmer L, Monley D. Establishment of 'The Gene Mine': A resource for rapid identification of complex trait genes. Mamm Genome 2008; 19: 390-393
    • (2008) Mamm Genome , vol.19 , pp. 390-393
    • Morahan, G.1    Balmer, L.2    Monley, D.3
  • 15
    • 84857383489 scopus 로고    scopus 로고
    • Genetic analysis of hematological parameters in incipient lines of the collaborative cross
    • Kelada SN, Aylor DL, Peck BC, Ryan JF, Tavarez U, Buus RJ et al. Genetic analysis of hematological parameters in incipient lines of the collaborative cross. G3 (Bethesda) 2012; 2: 157-165
    • (2012) G3 (Bethesda , vol.2 , pp. 157-165
    • Kelada, S.N.1    Aylor, D.L.2    Peck, B.C.3    Ryan, J.F.4    Tavarez, U.5    Buus, R.J.6
  • 17
    • 57249094296 scopus 로고    scopus 로고
    • 129/SvJ mice have mutated CD23 and hyper IgE
    • Ford JW, Sturgill JL, Conrad DH. 129/SvJ mice have mutated CD23 and hyper IgE. Cell Immunol 2009; 254: 124-134
    • (2009) Cell Immunol , vol.254 , pp. 124-134
    • Ford, J.W.1    Sturgill, J.L.2    Conrad, D.H.3
  • 19
    • 68449092963 scopus 로고    scopus 로고
    • Wiskott-Aldrich syndrome immunodeficiency resulting from defective cell migration and impaired immunostimulatory activation
    • Bouma G, Burns SO, Thrasher AJ. Wiskott-Aldrich Syndrome: Immunodeficiency resulting from defective cell migration and impaired immunostimulatory activation. Immunobiology 2009; 214: 778-790
    • (2009) Immunobiology , vol.214 , pp. 778-790
    • Bouma, G.1    Burns, S.O.2    Thrasher, A.J.3
  • 20
    • 84862909201 scopus 로고    scopus 로고
    • CCR7-mediated LFA-1 functions in T cells are regulated by 2 independent ADAP/SKAP55 modules
    • Kliche S, Worbs T, Wang X, Degen J, Patzak I, Meineke B et al. CCR7-mediated LFA-1 functions in T cells are regulated by 2 independent ADAP/SKAP55 modules. Blood 2012; 119: 777-785
    • (2012) Blood , vol.119 , pp. 777-785
    • Kliche, S.1    Worbs, T.2    Wang, X.3    Degen, J.4    Patzak, I.5    Meineke, B.6
  • 21
    • 84857405495 scopus 로고    scopus 로고
    • A general Bayesian approach to analyzing diallel crosses of inbred strains
    • Lenarcic AB, Svenson KL, Churchill GA, Valdar W. A general Bayesian approach to analyzing diallel crosses of inbred strains. Genetics 2012; 190: 413-435
    • (2012) Genetics , vol.190 , pp. 413-435
    • Lenarcic, A.B.1    Svenson, K.L.2    Churchill, G.A.3    Valdar, W.4
  • 23
    • 80052851950 scopus 로고    scopus 로고
    • Mouse genomic variation and its effect on phenotypes and gene regulation
    • Keane TM, Goodstadt L, Danecek P, White MA, Wong K, Yalcin B et al. Mouse genomic variation and its effect on phenotypes and gene regulation. Nature 2011; 477: 289-294
    • (2011) Nature , vol.477 , pp. 289-294
    • Keane, T.M.1    Goodstadt, L.2    Danecek, P.3    White, M.A.4    Wong, K.5    Yalcin, B.6
  • 24
    • 31544436869 scopus 로고    scopus 로고
    • Using progenitor strain information to identify quantitative trait nucleotides in outbred mice
    • Yalcin B, Flint J, Mott R. Using progenitor strain information to identify quantitative trait nucleotides in outbred mice. Genetics 2005; 171: 673-681
    • (2005) Genetics , vol.171 , pp. 673-681
    • Yalcin, B.1    Flint, J.2    Mott, R.3
  • 25
    • 0036681416 scopus 로고    scopus 로고
    • Scoring residue conservation
    • Valdar WSJ. Scoring residue conservation. Proteins 2002; 48: 227-241
    • (2002) Proteins , vol.48 , pp. 227-241
    • Valdar, W.S.J.1
  • 26
    • 74949129174 scopus 로고    scopus 로고
    • ProPhylER: A curated online resource for protein function and structure based on evolutionary constraint analyses
    • Binkley J, Karra K, Kirby A, Hosobuchi M, Stone EA, Sidow A. ProPhylER: A curated online resource for protein function and structure based on evolutionary constraint analyses. Genome Res 2010; 20: 142-154
    • (2010) Genome Res , vol.20 , pp. 142-154
    • Binkley, J.1    Karra, K.2    Kirby, A.3    Hosobuchi, M.4    Stone, E.A.5    Sidow, A.6
  • 27
  • 29
    • 0031914691 scopus 로고    scopus 로고
    • Effect of within-strain sample size on QTL detection and mapping using recombinant inbred mouse strains
    • Belknap JK. Effect of within-strain sample size on QTL detection and mapping using recombinant inbred mouse strains. Behav Genet 1998; 28: 29-38
    • (1998) Behav Genet , vol.28 , pp. 29-38
    • Belknap, J.K.1
  • 30
    • 80051556204 scopus 로고    scopus 로고
    • Collaborative Cross mice and their power to map host susceptibility to Aspergillus fumigatus infection
    • Durrant C, Tayem H, Yalcin B, Cleak J, Goodstadt L, de Villena FP et al. Collaborative Cross mice and their power to map host susceptibility to Aspergillus fumigatus infection. Genome Res 2011; 21: 1239-1248
    • (2011) Genome Res , vol.21 , pp. 1239-1248
    • Durrant, C.1    Tayem, H.2    Yalcin, B.3    Cleak, J.4    Goodstadt, L.5    De Villena, F.P.6
  • 32
    • 4544291834 scopus 로고    scopus 로고
    • Nonobese diabetic CD4 lymphocytosis maps outside the MHC locus on chromosome 17
    • Koarada S, Wu Y, Yim YS, Wakeland EW, Ridgway WM. Nonobese diabetic CD4 lymphocytosis maps outside the MHC locus on chromosome 17. Immunogenetics 2004; 56: 333-337
    • (2004) Immunogenetics , vol.56 , pp. 333-337
    • Koarada, S.1    Wu, Y.2    Yim, Y.S.3    Wakeland, E.W.4    Ridgway, W.M.5
  • 34
    • 84863304598 scopus 로고    scopus 로고
    • Team RDA. In R Foundation of Statistical Computing: Vienna, Austria
    • Team RDA. Language and Environment for Statistical Computing. In R Foundation of Statistical Computing: Vienna, Austria, 2012
    • (2012) Language and Environment for Statistical Computing
  • 36
    • 49849092907 scopus 로고    scopus 로고
    • Simultaneous inference in general parametric models
    • Hothorn T, Bretz F, Westfall P. Simultaneous inference in general parametric models. Biom J 2008; 50: 346-363
    • (2008) Biom J , vol.50 , pp. 346-363
    • Hothorn, T.1    Bretz, F.2    Westfall, P.3
  • 40
    • 68249130288 scopus 로고    scopus 로고
    • Mapping in structured populations by resample model averaging
    • Valdar W, Holmes CC, Mott R, Flint J. Mapping in structured populations by resample model averaging. Genetics 2009; 182: 1263-1277
    • (2009) Genetics , vol.182 , pp. 1263-1277
    • Valdar, W.1    Holmes, C.C.2    Mott, R.3    Flint, J.4
  • 41
    • 80052321622 scopus 로고    scopus 로고
    • Genome-wide and species-wide dissection of the genetics of arthritis severity in heterogeneous stock mice
    • Johnsen AK, Valdar W, Golden L, Ortiz-Lopez A, Hitzemann R, Flint J et al. Genome-wide and species-wide dissection of the genetics of arthritis severity in heterogeneous stock mice. Arthritis Rheum 2011; 63: 2630-2640
    • (2011) Arthritis Rheum , vol.63 , pp. 2630-2640
    • Johnsen, A.K.1    Valdar, W.2    Golden, L.3    Ortiz-Lopez, A.4    Hitzemann, R.5    Flint, J.6
  • 42
    • 84972496336 scopus 로고
    • That blup is a good thing: The estimation of random effects
    • Robinson G. That BLUP is a good thing: The estimation of random effects. Statistical Science 1991; 6: 15-51
    • (1991) Statistical Science , vol.6 , pp. 15-51
    • Robinson, G.1
  • 43
    • 84868566945 scopus 로고    scopus 로고
    • Fine-mapping diabetes-related traits, including insulin resistance, in heterogeneous stock rats
    • Solberg Woods LC, Holl KL, Oreper D, Xie Y, Tsaih SW, Valdar W. Fine-mapping diabetes-related traits, including insulin resistance, in heterogeneous stock rats. Physiol Genomics 2012; 44: 1013-1026
    • (2012) Physiol Genomics , vol.44 , pp. 1013-1026
    • Solberg Woods, L.C.1    Holl, K.L.2    Oreper, D.3    Xie, Y.4    Tsaih, S.W.5    Valdar, W.6
  • 44
    • 0032944437 scopus 로고    scopus 로고
    • Statistical methods for mapping quantitative trait loci from a dense set of markers
    • Dupuis J, Siegmund D. Statistical methods for mapping quantitative trait loci from a dense set of markers. Genetics 1999; 151: 373-386
    • (1999) Genetics , vol.151 , pp. 373-386
    • Dupuis, J.1    Siegmund, D.2
  • 45
    • 77949706465 scopus 로고    scopus 로고
    • Fine-mapping a locus for glucose tolerance using heterogeneous stock rats
    • Solberg Woods LC, Holl K, Tschannen M, Valdar W. Fine-mapping a locus for glucose tolerance using heterogeneous stock rats. Physiol Genomics 2010; 41: 102-108
    • (2010) Physiol Genomics , vol.41 , pp. 102-108
    • Solberg Woods, L.C.1    Holl, K.2    Tschannen, M.3    Valdar, W.4
  • 46
    • 0030068965 scopus 로고    scopus 로고
    • Confidence intervals in QTL mapping by bootstrapping
    • Visscher PM, Thompson R, Haley CS. Confidence intervals in QTL mapping by bootstrapping. Genetics 1996; 143: 1013-1020
    • (1996) Genetics , vol.143 , pp. 1013-1020
    • Visscher, P.M.1    Thompson, R.2    Haley, C.S.3
  • 47
    • 0000120766 scopus 로고
    • Estimating dimension of a model
    • Schwarz G. Estimating Dimension of a Model. Annals of Statistics 1978; 6: 461-464.
    • (1978) Annals of Statistics , vol.6 , pp. 461-464
    • Schwarz, G.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.