Deep sequencing and de novo assembly of the mouse oocyte transcriptome define the contribution of transcription to the DNA methylation landscape

Genome Biology

Volumn 16, Issue 1, 2015, Pages

  Veselovska, Lenka ^a   Smallwood, Sebastien A ^a   Saadeh, Heba ^a   Stewart, Kathleen R ^a   Krueger, Felix ^a   Maupetit Méhouas, Stéphanie ^b   Arnaud, Philippe ^b   Tomizawa, Shin ichi ^c   Andrews, Simon ^a   Kelsey, Gavin ^a,d  

^a BABRAHAM INSTITUTE   (United Kingdom)

^b UNIVERSITÉ CLERMONT AUVERGNE   (France)

^c YOKOHAMA CITY UNIVERSITY   (Japan)

^d UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE DEMETHYLASE; HISTONE H3; TRANSCRIPTOME; CELL CYCLE PROTEIN; PLAGL1 PROTEIN, MOUSE; TRANSCRIPTION FACTOR; TRANSPOSON;

ANIMAL CELL; ARTICLE; CHROMATIN ASSEMBLY AND DISASSEMBLY; CONTROLLED STUDY; CPG ISLAND; DNA METHYLATION; DNA TRANSCRIPTION; FEMALE; GENE; GENE EXPRESSION; GENE LOCUS; GENETIC TRANSCRIPTION; GERM CELL; MOUSE; NONHUMAN; OOCYTE; OOCYTE DEVELOPMENT; PLAGL1 GENE; PROMOTER REGION; RNA SEQUENCE; SEQUENCE ANALYSIS; TRANSCRIPTION INITIATION SITE; TRANSCRIPTOMICS; TRANSPOSON; ZAC1 GENE; ANIMAL; GENE EXPRESSION PROFILING; GENETICS; GENOME IMPRINTING; HIGH THROUGHPUT SEQUENCING; METABOLISM; TRANSGENIC MOUSE; TUMOR SUPPRESSOR GENE;

ANIMALS; CELL CYCLE PROTEINS; CHROMATIN ASSEMBLY AND DISASSEMBLY; CPG ISLANDS; DNA METHYLATION; DNA TRANSPOSABLE ELEMENTS; FEMALE; GENE EXPRESSION PROFILING; GENES, TUMOR SUPPRESSOR; GENOMIC IMPRINTING; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MICE; MICE, TRANSGENIC; OOCYTES; SEQUENCE ANALYSIS, RNA; TRANSCRIPTION FACTORS; TRANSCRIPTION INITIATION SITE; TRANSCRIPTOME;

EID: 84942313259     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/s13059-015-0769-z     Document Type: Article

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