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Volumn 137, Issue 11, 2015, Pages 2589-2606

Alterations of the spindle checkpoint pathway in clinicopathologically aggressive CpG island methylator phenotype clear cell renal cell carcinomas

Author keywords

aurora kinases; clear cell renal cell carcinoma (RCC); CpG island methylator phenotype (CIMP); multi layer omics analysis; spindle checkpoint

Indexed keywords

AURORA A KINASE; AURORA B KINASE; CELL CYCLE PROTEIN 20; TRANSCRIPTOME; AURORA KINASE; MICROTUBULE ASSOCIATED PROTEIN; PROTEOME;

EID: 84941739822     PISSN: 00207136     EISSN: 10970215     Source Type: Journal    
DOI: 10.1002/ijc.29630     Document Type: Article
Times cited : (34)

References (50)
  • 1
    • 84863770814 scopus 로고    scopus 로고
    • Cancer genetics and epigenetics: Two sides of the same coin?
    • You JS, Jones PA., Cancer genetics and epigenetics: two sides of the same coin? Cancer Cell 2012; 22: 9-20.
    • (2012) Cancer Cell , vol.22 , pp. 9-20
    • You, J.S.1    Jones, P.A.2
  • 2
    • 80053144962 scopus 로고    scopus 로고
    • A decade of exploring the cancer epigenome - Biological and translational implications
    • Baylin SB, Jones PA., A decade of exploring the cancer epigenome-biological and translational implications. Nat Rev Cancer 2011; 11: 726-34.
    • (2011) Nat Rev Cancer , vol.11 , pp. 726-734
    • Baylin, S.B.1    Jones, P.A.2
  • 3
    • 71849113808 scopus 로고    scopus 로고
    • Genome-wide DNA methylation profiles in precancerous conditions and cancers
    • Kanai Y., Genome-wide DNA methylation profiles in precancerous conditions and cancers. Cancer Sci 2010; 101: 36-45.
    • (2010) Cancer Sci , vol.101 , pp. 36-45
    • Kanai, Y.1
  • 4
    • 77954133525 scopus 로고    scopus 로고
    • DNA methylation profiles in precancerous tissue and cancers: Carcinogenetic risk estimation and prognostication based on DNA methylation status
    • Arai E, Kanai Y., DNA methylation profiles in precancerous tissue and cancers: carcinogenetic risk estimation and prognostication based on DNA methylation status. Epigenomics 2010; 2: 467-81.
    • (2010) Epigenomics , vol.2 , pp. 467-481
    • Arai, E.1    Kanai, Y.2
  • 5
    • 10344260184 scopus 로고    scopus 로고
    • CpG island methylator phenotype in cancer
    • Issa JP., CpG island methylator phenotype in cancer. Nat Rev Cancer 2004; 4: 988-93.
    • (2004) Nat Rev Cancer , vol.4 , pp. 988-993
    • Issa, J.P.1
  • 6
    • 36749025213 scopus 로고    scopus 로고
    • Integrated genetic and epigenetic analysis identifies three different subclasses of colon cancer
    • Shen L, Toyota M, Kondo Y, et al., Integrated genetic and epigenetic analysis identifies three different subclasses of colon cancer. Proc Natl Acad Sci USA 2007; 104: 18654-9.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 18654-18659
    • Shen, L.1    Toyota, M.2    Kondo, Y.3
  • 7
    • 0033229890 scopus 로고    scopus 로고
    • Aberrant methylation in gastric cancer associated with the CpG island methylator phenotype
    • Toyota M, Ahuja N, Suzuki H, et al., Aberrant methylation in gastric cancer associated with the CpG island methylator phenotype. Cancer Res 1999; 59: 5438-42.
    • (1999) Cancer Res , vol.59 , pp. 5438-5442
    • Toyota, M.1    Ahuja, N.2    Suzuki, H.3
  • 8
    • 80052270947 scopus 로고    scopus 로고
    • The epidemiology of renal cell carcinoma
    • Ljungberg B, Campbell SC, Choi HY, et al., The epidemiology of renal cell carcinoma. Eur Urol 2011; 60: 615-21.
    • (2011) Eur Urol , vol.60 , pp. 615-621
    • Ljungberg, B.1    Campbell, S.C.2    Choi, H.Y.3
  • 9
    • 33745213611 scopus 로고    scopus 로고
    • Regional DNA hypermethylation and DNA methyltransferase (DNMT) 1 protein overexpression in both renal tumors and corresponding nontumorous renal tissues
    • Arai E, Kanai Y, Ushijima S, et al., Regional DNA hypermethylation and DNA methyltransferase (DNMT) 1 protein overexpression in both renal tumors and corresponding nontumorous renal tissues. Int J Cancer 2006; 119: 288-96.
    • (2006) Int J Cancer , vol.119 , pp. 288-296
    • Arai, E.1    Kanai, Y.2    Ushijima, S.3
  • 10
    • 60149106402 scopus 로고    scopus 로고
    • Genome-wide DNA methylation profiles in both precancerous conditions and clear cell renal cell carcinomas are correlated with malignant potential and patient outcome
    • Arai E, Ushijima S, Fujimoto H, et al., Genome-wide DNA methylation profiles in both precancerous conditions and clear cell renal cell carcinomas are correlated with malignant potential and patient outcome. Carcinogenesis 2009; 30: 214-21.
    • (2009) Carcinogenesis , vol.30 , pp. 214-221
    • Arai, E.1    Ushijima, S.2    Fujimoto, H.3
  • 11
    • 78751681420 scopus 로고    scopus 로고
    • Epigenetics of renal cell carcinoma: The path towards new diagnostics and therapeutics
    • Morris MR, Maher ER., Epigenetics of renal cell carcinoma: the path towards new diagnostics and therapeutics. Genome Med 2010; 2: 59.
    • (2010) Genome Med , vol.2 , pp. 59
    • Morris, M.R.1    Maher, E.R.2
  • 12
    • 84856306090 scopus 로고    scopus 로고
    • Genome-wide DNA methylation profiling using Infinium® assay
    • Bibikova M, Le J, Barnes B, et al., Genome-wide DNA methylation profiling using Infinium® assay. Epigenomics 2009; 1: 177-200.
    • (2009) Epigenomics , vol.1 , pp. 177-200
    • Bibikova, M.1    Le, J.2    Barnes, B.3
  • 13
    • 84865339838 scopus 로고    scopus 로고
    • Single-CpG-resolution methylome analysis identifies clinicopathologically aggressive CpG island methylator phenotype clear cell renal cell carcinomas
    • Arai E, Chiku S, Mori T, et al., Single-CpG-resolution methylome analysis identifies clinicopathologically aggressive CpG island methylator phenotype clear cell renal cell carcinomas. Carcinogenesis 2012; 33: 1487-93.
    • (2012) Carcinogenesis , vol.33 , pp. 1487-1493
    • Arai, E.1    Chiku, S.2    Mori, T.3
  • 14
    • 84880967722 scopus 로고    scopus 로고
    • Integrated molecular analysis of clear-cell renal cell carcinoma
    • Sato Y, Yoshizato T, Shiraishi Y, et al., Integrated molecular analysis of clear-cell renal cell carcinoma. Nat Genet 2013; 45: 860-7.
    • (2013) Nat Genet , vol.45 , pp. 860-867
    • Sato, Y.1    Yoshizato, T.2    Shiraishi, Y.3
  • 16
    • 0020376310 scopus 로고
    • Prognostic significance of morphologic parameters in renal cell carcinoma
    • Fuhrman SA, Lasky LC, Limas C., Prognostic significance of morphologic parameters in renal cell carcinoma. Am J Surg Pathol 1982; 6: 655-63.
    • (1982) Am J Surg Pathol , vol.6 , pp. 655-663
    • Fuhrman, S.A.1    Lasky, L.C.2    Limas, C.3
  • 17
    • 0003412931 scopus 로고    scopus 로고
    • International Union Against Cancer
    • Sobin L.H. Gospodarowicz M.K. Wittekind C. eds. 7th ed. New York: Wiley
    • Sobin LH, Gospodarowicz MK, Wittekind C, eds. International Union Against Cancer. TNM classification of malignant tumors, 7th ed. New York: Wiley, 2009.
    • (2009) TNM Classification of Malignant Tumors
  • 18
    • 84929939546 scopus 로고    scopus 로고
    • Prognostication of patients with clear cell renal cell carcinomas based on quantification of DNA methylation levels of CpG island methylator phenotype marker genes
    • Tian Y, Arai E, Gotoh M, et al., Prognostication of patients with clear cell renal cell carcinomas based on quantification of DNA methylation levels of CpG island methylator phenotype marker genes. BMC Cancer 2014; 14: 772.
    • (2014) BMC Cancer , vol.14 , pp. 772
    • Tian, Y.1    Arai, E.2    Gotoh, M.3
  • 19
    • 84904015632 scopus 로고    scopus 로고
    • Multilayer-omics analysis of renal cell carcinoma, including the whole exome, methylome and transcriptome
    • Arai E, Sakamoto H, Ichikawa H, et al., Multilayer-omics analysis of renal cell carcinoma, including the whole exome, methylome and transcriptome. Int J Cancer 2014; 135: 1330-42.
    • (2014) Int J Cancer , vol.135 , pp. 1330-1342
    • Arai, E.1    Sakamoto, H.2    Ichikawa, H.3
  • 20
    • 84863011464 scopus 로고    scopus 로고
    • Whole-exome sequencing of human pancreatic cancers and characterization of genomic instability caused by MLH1 haploinsufficiency and complete deficiency
    • Wang L, Tsutsumi S, Kawaguchi T, et al., Whole-exome sequencing of human pancreatic cancers and characterization of genomic instability caused by MLH1 haploinsufficiency and complete deficiency. Genome Res 2012; 22: 208-19.
    • (2012) Genome Res , vol.22 , pp. 208-219
    • Wang, L.1    Tsutsumi, S.2    Kawaguchi, T.3
  • 21
    • 0036119504 scopus 로고    scopus 로고
    • Accounting for human polymorphisms predicted to affect protein function
    • Ng PC, Henikoff S., Accounting for human polymorphisms predicted to affect protein function. Genome Res 2002; 12: 436-46.
    • (2002) Genome Res , vol.12 , pp. 436-446
    • Ng, P.C.1    Henikoff, S.2
  • 22
    • 79957621519 scopus 로고    scopus 로고
    • Prediction of missense mutation functionality depends on both the algorithm and sequence alignment employed
    • Hicks S, Wheeler DA, Plon SE, et al., Prediction of missense mutation functionality depends on both the algorithm and sequence alignment employed. Hum Mutat 2011; 32: 661-8.
    • (2011) Hum Mutat , vol.32 , pp. 661-668
    • Hicks, S.1    Wheeler, D.A.2    Plon, S.E.3
  • 23
    • 84864430562 scopus 로고    scopus 로고
    • SIFT web server: Predicting effects of amino acid substitutions on proteins
    • Sim NL, Kumar P, Hu J, et al., SIFT web server: predicting effects of amino acid substitutions on proteins. Nucleic Acids Res 2012; 40: W452-7.
    • (2012) Nucleic Acids Res , vol.40 , pp. W452-W457
    • Sim, N.L.1    Kumar, P.2    Hu, J.3
  • 25
    • 79960268207 scopus 로고    scopus 로고
    • GPHMM: An integrated hidden Markov model for identification of copy number alteration and loss of heterozygosity in complex tumor samples using whole genome SNP arrays
    • Li A, Liu Z, Lezon-Geyda K, et al., GPHMM: an integrated hidden Markov model for identification of copy number alteration and loss of heterozygosity in complex tumor samples using whole genome SNP arrays. Nucleic Acids Res 2011; 39: 4928-41.
    • (2011) Nucleic Acids Res , vol.39 , pp. 4928-4941
    • Li, A.1    Liu, Z.2    Lezon-Geyda, K.3
  • 26
    • 33746285299 scopus 로고    scopus 로고
    • Label-free quantitative proteomics using large peptide data sets generated by nanoflow liquid chromatography and mass spectrometry
    • Ono M, Shitashige M, Honda K, et al., Label-free quantitative proteomics using large peptide data sets generated by nanoflow liquid chromatography and mass spectrometry. Mol Cell Proteomics 2006; 5: 1338-47.
    • (2006) Mol Cell Proteomics , vol.5 , pp. 1338-1347
    • Ono, M.1    Shitashige, M.2    Honda, K.3
  • 27
    • 39749125069 scopus 로고    scopus 로고
    • Phase transfer surfactant-aided trypsin digestion for membrane proteome analysis
    • Masuda T, Tomita M, Ishihama Y., Phase transfer surfactant-aided trypsin digestion for membrane proteome analysis. J Proteome Res 2008; 7: 731-40.
    • (2008) J Proteome Res , vol.7 , pp. 731-740
    • Masuda, T.1    Tomita, M.2    Ishihama, Y.3
  • 28
    • 2342639645 scopus 로고    scopus 로고
    • VX-680, a potent and selective small-molecule inhibitor of the Aurora kinases, suppresses tumor growth in vivo
    • Harrington EA, Bebbington D, Moore J, et al., VX-680, a potent and selective small-molecule inhibitor of the Aurora kinases, suppresses tumor growth in vivo. Nat Med 2004; 10: 262-7.
    • (2004) Nat Med , vol.10 , pp. 262-267
    • Harrington, E.A.1    Bebbington, D.2    Moore, J.3
  • 29
    • 84879890360 scopus 로고    scopus 로고
    • Cancer Genome Atlas Research Network. Comprehensive molecular characterization of clear cell renal cell carcinoma
    • Cancer Genome Atlas Research Network. Comprehensive molecular characterization of clear cell renal cell carcinoma. Nature 2013; 499: 43-9.
    • (2013) Nature , vol.499 , pp. 43-49
  • 30
    • 79251635938 scopus 로고    scopus 로고
    • Exome sequencing identifies frequent mutation of the SWI/SNF complex gene PBRM1 in renal carcinoma
    • Varela I, Tarpey P, Raine K, et al., Exome sequencing identifies frequent mutation of the SWI/SNF complex gene PBRM1 in renal carcinoma. Nature 2011; 469: 539-42.
    • (2011) Nature , vol.469 , pp. 539-542
    • Varela, I.1    Tarpey, P.2    Raine, K.3
  • 31
    • 0030860532 scopus 로고    scopus 로고
    • Isolation of several human axonemal dynein heavy chain genes: Genomic structure of the catalytic site, phylogenetic analysis and chromosomal assignment
    • Chapelin C, Duriez B, Magnino F, et al., Isolation of several human axonemal dynein heavy chain genes: genomic structure of the catalytic site, phylogenetic analysis and chromosomal assignment. FEBS Lett 1997; 412: 325-30.
    • (1997) FEBS Lett , vol.412 , pp. 325-330
    • Chapelin, C.1    Duriez, B.2    Magnino, F.3
  • 32
    • 0034978643 scopus 로고    scopus 로고
    • Regulation of microtubule assembly by human EB1 family proteins
    • Bu W, Su LK., Regulation of microtubule assembly by human EB1 family proteins. Oncogene 2001; 20: 3185-92.
    • (2001) Oncogene , vol.20 , pp. 3185-3192
    • Bu, W.1    Su, L.K.2
  • 33
    • 80051929486 scopus 로고    scopus 로고
    • Aurora-A phosphorylates Augmin complex component Hice1 protein at an N-terminal serine/threonine cluster to modulate its microtubule binding activity during spindle assembly
    • Tsai CY, Ngo B, Tapadia A, et al., Aurora-A phosphorylates Augmin complex component Hice1 protein at an N-terminal serine/threonine cluster to modulate its microtubule binding activity during spindle assembly. J Biol Chem 2011; 286: 30097-106.
    • (2011) J Biol Chem , vol.286 , pp. 30097-30106
    • Tsai, C.Y.1    Ngo, B.2    Tapadia, A.3
  • 34
    • 44349083131 scopus 로고    scopus 로고
    • Hice1, a novel microtubule-associated protein required for maintenance of spindle integrity and chromosomal stability in human cells
    • Wu G, Lin YT, Wei R, et al., Hice1, a novel microtubule-associated protein required for maintenance of spindle integrity and chromosomal stability in human cells. Mol Cell Biol 2008; 28: 3652-62.
    • (2008) Mol Cell Biol , vol.28 , pp. 3652-3662
    • Wu, G.1    Lin, Y.T.2    Wei, R.3
  • 35
    • 75149188170 scopus 로고    scopus 로고
    • Systematic sequencing of renal carcinoma reveals inactivation of histone modifying genes
    • Dalgliesh GL, Furge K, Greenman C, et al., Systematic sequencing of renal carcinoma reveals inactivation of histone modifying genes. Nature 2010; 463: 360-3.
    • (2010) Nature , vol.463 , pp. 360-363
    • Dalgliesh, G.L.1    Furge, K.2    Greenman, C.3
  • 36
    • 20444436222 scopus 로고    scopus 로고
    • Hybrid GPCR/cadherin (Celsr) proteins in rat testis are expressed with cell type specificity and exhibit differential Sertoli cell-germ cell adhesion activity
    • Beall SA, Boekelheide K, Johnson KJ., Hybrid GPCR/cadherin (Celsr) proteins in rat testis are expressed with cell type specificity and exhibit differential Sertoli cell-germ cell adhesion activity. J Androl 2005; 26: 529-38.
    • (2005) J Androl , vol.26 , pp. 529-538
    • Beall, S.A.1    Boekelheide, K.2    Johnson, K.J.3
  • 37
    • 84862174437 scopus 로고    scopus 로고
    • Regulation of adherens junctions by Rho GTPases and p120-catenin
    • Menke A, Giehl K., Regulation of adherens junctions by Rho GTPases and p120-catenin. Arch Biochem Biophys 2012; 524: 48-55.
    • (2012) Arch Biochem Biophys , vol.524 , pp. 48-55
    • Menke, A.1    Giehl, K.2
  • 38
    • 79953028234 scopus 로고    scopus 로고
    • Aberrant up-regulation of LAMB3 and LAMC2 by promoter demethylation in gastric cancer
    • Kwon OH, Park JL, Kim M, et al., Aberrant up-regulation of LAMB3 and LAMC2 by promoter demethylation in gastric cancer. Biochem Biophys Res Commun 2011; 406: 539-45.
    • (2011) Biochem Biophys Res Commun , vol.406 , pp. 539-545
    • Kwon, O.H.1    Park, J.L.2    Kim, M.3
  • 39
    • 56749184887 scopus 로고    scopus 로고
    • Tight junction-based epithelial microenvironment and cell proliferation
    • Tsukita S, Yamazaki Y, Katsuno T, et al., Tight junction-based epithelial microenvironment and cell proliferation. Oncogene 2008; 27: 6930-8.
    • (2008) Oncogene , vol.27 , pp. 6930-6938
    • Tsukita, S.1    Yamazaki, Y.2    Katsuno, T.3
  • 40
    • 84655176646 scopus 로고    scopus 로고
    • Frequent mutations of genes encoding ubiquitin-mediated proteolysis pathway components in clear cell renal cell carcinoma
    • 1 9
    • Guo G, Gui Y, Gao S, et al., Frequent mutations of genes encoding ubiquitin-mediated proteolysis pathway components in clear cell renal cell carcinoma. Nat Genet 2012; 44: 17 -1 9.
    • (2012) Nat Genet , vol.44 , pp. 17
    • Guo, G.1    Gui, Y.2    Gao, S.3
  • 41
    • 84903629564 scopus 로고    scopus 로고
    • ATM signalling and cancer
    • Cremona CA, Behrens A., ATM signalling and cancer. Oncogene 2014; 33: 3351-60.
    • (2014) Oncogene , vol.33 , pp. 3351-3360
    • Cremona, C.A.1    Behrens, A.2
  • 42
    • 84873721726 scopus 로고    scopus 로고
    • Aurora A kinase (AURKA) in normal and pathological cell division
    • Nikonova AS, Astsaturov I, Serebriiskii IG, et al., Aurora A kinase (AURKA) in normal and pathological cell division. Cell Mol Life Sci 2013; 70: 661-87.
    • (2013) Cell Mol Life Sci , vol.70 , pp. 661-687
    • Nikonova, A.S.1    Astsaturov, I.2    Serebriiskii, I.G.3
  • 43
    • 84875884817 scopus 로고    scopus 로고
    • Aurora B: Hooking up with cyclin-dependent kinases
    • Poon RY., Aurora B: hooking up with cyclin-dependent kinases. Cell Cycle 2013; 12: 1019-20.
    • (2013) Cell Cycle , vol.12 , pp. 1019-1020
    • Poon, R.Y.1
  • 44
    • 80055040429 scopus 로고    scopus 로고
    • Overexpression of active Aurora-C kinase results in cell transformation and tumour formation
    • Khan J, Ezan F, Crémet JY, et al., Overexpression of active Aurora-C kinase results in cell transformation and tumour formation. PLoS One 2011; 6: e26512.
    • (2011) PLoS One , vol.6 , pp. e26512
    • Khan, J.1    Ezan, F.2    Crémet, J.Y.3
  • 45
    • 0032506524 scopus 로고    scopus 로고
    • Control of apoptosis and mitotic spindle checkpoint by survivin
    • Li F, Ambrosini G, Chu EY, et al., Control of apoptosis and mitotic spindle checkpoint by survivin. Nature 1998; 396: 580-4.
    • (1998) Nature , vol.396 , pp. 580-584
    • Li, F.1    Ambrosini, G.2    Chu, E.Y.3
  • 46
    • 80655123645 scopus 로고    scopus 로고
    • Aurora B hyperactivation by Bub1 overexpression promotes chromosome missegregation
    • Ricke RM, van Deursen JM., Aurora B hyperactivation by Bub1 overexpression promotes chromosome missegregation. Cell Cycle 2011; 10: 3645-51.
    • (2011) Cell Cycle , vol.10 , pp. 3645-3651
    • Ricke, R.M.1    Van Deursen, J.M.2
  • 47
    • 76449118938 scopus 로고    scopus 로고
    • Cyclin A and Nek2A: APC/C-Cdc20 substrates invisible to the mitotic spindle checkpoint
    • van Zon W, Wolthuis RM., Cyclin A and Nek2A: APC/C-Cdc20 substrates invisible to the mitotic spindle checkpoint. Biochem Soc Trans 2010; 38: 72-7.
    • (2010) Biochem Soc Trans , vol.38 , pp. 72-77
    • Van Zon, W.1    Wolthuis, R.M.2
  • 48
    • 17244363408 scopus 로고    scopus 로고
    • Molecular organization of the Ndc80 complex, an essential kinetochore component
    • Wei RR, Sorger PK, Harrison SC., Molecular organization of the Ndc80 complex, an essential kinetochore component. Proc Natl Acad Sci USA 2005; 102: 5363-7.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 5363-5367
    • Wei, R.R.1    Sorger, P.K.2    Harrison, S.C.3
  • 49
    • 33846691148 scopus 로고    scopus 로고
    • Left-right dynein motor implicated in selective chromatid segregation in mouse cells
    • Armakolas A, Klar AJ., Left-right dynein motor implicated in selective chromatid segregation in mouse cells. Science 2007; 315: 100-1.
    • (2007) Science , vol.315 , pp. 100-101
    • Armakolas, A.1    Klar, A.J.2
  • 50
    • 79956223049 scopus 로고    scopus 로고
    • Aurora kinase inhibitor patents and agents in clinical testing: An update (2009-10)
    • Cheung CH, Coumar MS, Chang JY, et al., Aurora kinase inhibitor patents and agents in clinical testing: an update (2009-10). Expert Opin Ther Pat 2011; 21: 857-84.
    • (2011) Expert Opin Ther Pat , vol.21 , pp. 857-884
    • Cheung, C.H.1    Coumar, M.S.2    Chang, J.Y.3


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