메뉴 건너뛰기




Volumn 10, Issue 7, 2015, Pages

Genomic analysis of the emergence and rapid global dissemination of the clonal group 258 Klebsiella pneumoniae pandemic

Author keywords

[No Author keywords available]

Indexed keywords

OUTER MEMBRANE PROTEIN; BACTERIAL PROTEIN; OMPK37 PROTEIN, KLEBSIELLA PNEUMONIAE; PORIN;

EID: 84941243520     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0133727     Document Type: Article
Times cited : (174)

References (78)
  • 1
    • 84884597711 scopus 로고    scopus 로고
    • Centers for Disease Control and Prevention, Centers for Disease Control and Prevention
    • Centers for Disease Control and Prevention. Antibiotic Resistance Threats in the United States, 2013. Centers for Disease Control and Prevention, 2013.
    • (2013) Antibiotic Resistance Threats in the United States, 2013
  • 4
    • 0035084032 scopus 로고    scopus 로고
    • Novel carbapenem-hydrolyzing beta-lactamase, KPC-1, from a carbapenem-resistant strain of Klebsiella pneumoniae
    • Epub 2001/03/21, PMID: 11257029; PubMed Central PMCID: PMC90438
    • Yigit H, Queenan AM, Anderson GJ, Domenech-Sanchez A, Biddle JW, Steward CD, et al. Novel carbapenem-hydrolyzing beta-lactamase, KPC-1, from a carbapenem-resistant strain of Klebsiella pneumoniae. Antimicrob Agents Chemother. 2001; 45(4):1151-61. Epub 2001/03/21. doi: 10.1128/AAC.45. 4.1151-1161.2001 PMID: 11257029; PubMed Central PMCID: PMC90438.
    • (2001) Antimicrob Agents Chemother. , vol.45 , Issue.4 , pp. 1151-1161
    • Yigit, H.1    Queenan, A.M.2    Anderson, G.J.3    Domenech-Sanchez, A.4    Biddle, J.W.5    Steward, C.D.6
  • 5
    • 84856162360 scopus 로고    scopus 로고
    • Emergence of New Delhi metallobeta-lactamase (NDM-1) and Klebsiella pneumoniae carbapenemase (KPC-2) in South Africa
    • PMID: 22116157; PubMed Central PMCID: PMC3264190
    • Brink AJ, Coetzee J, Clay CG, Sithole S, Richards GA, Poirel L, et al. Emergence of New Delhi metallobeta-lactamase (NDM-1) and Klebsiella pneumoniae carbapenemase (KPC-2) in South Africa. J Clin Microbiol. 2012; 50(2):525-7. doi: 10.1128/JCM.05956-11 PMID: 22116157; PubMed Central PMCID: PMC3264190.
    • (2012) J Clin Microbiol. , vol.50 , Issue.2 , pp. 525-527
    • Brink, A.J.1    Coetzee, J.2    Clay, C.G.3    Sithole, S.4    Richards, G.A.5    Poirel, L.6
  • 7
    • 84872939837 scopus 로고    scopus 로고
    • Overview of the epidemiology and the threat of Klebsiella pneumoniae carbapenemases (KPC) resistance
    • PMID: 23055754; PubMed Central PMCID: PMC3460674
    • Chen LF, Anderson DJ, Paterson DL. Overview of the epidemiology and the threat of Klebsiella pneumoniae carbapenemases (KPC) resistance. Infection and drug resistance. 2012; 5:133-41. doi: 10.2147/IDR.S26613 PMID: 23055754; PubMed Central PMCID: PMC3460674.
    • (2012) Infection and Drug Resistance. , vol.5 , pp. 133-141
    • Chen, L.F.1    Anderson, D.J.2    Paterson, D.L.3
  • 8
    • 84908087779 scopus 로고    scopus 로고
    • Genomic definition of hypervirulent and multidrug-resistant Klebsiella pneumoniae clonal groups
    • PMID: 25341126; PubMed Central PMCID: PMC4214299
    • Bialek-Davenet S, Criscuolo A, Ailloud F, Passet V, Jones L, Delannoy-Vieillard AS, et al. Genomic definition of hypervirulent and multidrug-resistant Klebsiella pneumoniae clonal groups. Emerg Infect Dis. 2014; 20(11):1812-20. doi: 10.3201/eid2011.140206 PMID: 25341126; PubMed Central PMCID: PMC4214299.
    • (2014) Emerg Infect Dis. , vol.20 , Issue.11 , pp. 1812-1820
    • Bialek-Davenet, S.1    Criscuolo, A.2    Ailloud, F.3    Passet, V.4    Jones, L.5    Delannoy-Vieillard, A.S.6
  • 10
    • 84899545436 scopus 로고    scopus 로고
    • Carbapenemase-producing Enterobacteriaceae in a tertiary hospital in Madrid, Spain: High percentage of colistin resistance among VIM-1-producing Klebsiella pneumoniae ST11 isolates
    • PMID: 24657043
    • Pena I, Picazo JJ, Rodriguez-Avial C, Rodriguez-Avial I. Carbapenemase-producing Enterobacteriaceae in a tertiary hospital in Madrid, Spain: high percentage of colistin resistance among VIM-1-producing Klebsiella pneumoniae ST11 isolates. Int J Antimicrob Agents. 2014. doi: 10.1016/j.ijantimicag. 2014.01.021 PMID: 24657043.
    • (2014) Int J Antimicrob Agents.
    • Pena, I.1    Picazo, J.J.2    Rodriguez-Avial, C.3    Rodriguez-Avial, I.4
  • 11
    • 84872025829 scopus 로고    scopus 로고
    • Surveillance and molecular epidemiology of Klebsiella pneumoniae isolates that produce carbapenemases: First report of OXA-48-like enzymes in North America
    • PMID: 23070171; PubMed Central PMCID: PMC3535978
    • Lascols C, Peirano G, Hackel M, Laupland KB, Pitout JD. Surveillance and molecular epidemiology of Klebsiella pneumoniae isolates that produce carbapenemases: first report of OXA-48-like enzymes in North America. Antimicrob Agents Chemother. 2013; 57(1):130-6. doi: 10.1128/AAC.01686-12 PMID: 23070171; PubMed Central PMCID: PMC3535978.
    • (2013) Antimicrob Agents Chemother. , vol.57 , Issue.1 , pp. 130-136
    • Lascols, C.1    Peirano, G.2    Hackel, M.3    Laupland, K.B.4    Pitout, J.D.5
  • 12
    • 79960959584 scopus 로고    scopus 로고
    • Multiresistant Gram-negative bacteria: The role of high-risk clones in the dissemination of antibiotic resistance
    • PMID: 21303394
    • Woodford N, Turton JF, Livermore DM. Multiresistant Gram-negative bacteria: the role of high-risk clones in the dissemination of antibiotic resistance. FEMS microbiology reviews. 2011; 35(5):736-55. doi: 10.1111/j.1574-6976.2011.00268.x PMID: 21303394.
    • (2011) FEMS Microbiology Reviews. , vol.35 , Issue.5 , pp. 736-755
    • Woodford, N.1    Turton, J.F.2    Livermore, D.M.3
  • 14
    • 84882662582 scopus 로고    scopus 로고
    • Unique genes identified in the epidemic extremely drug-resistant KPC-producing Klebsiella pneumoniae sequence type 258
    • Epub 2012/10/09, PMID: 23042812
    • Chmelnitsky I, Shklyar M, Hermesh O, Navon-Venezia S, Edgar R, Carmeli Y. Unique genes identified in the epidemic extremely drug-resistant KPC-producing Klebsiella pneumoniae sequence type 258. J Antimicrob Chemother. 2013; 68(1):74-83. Epub 2012/10/09. doi: 10.1093/jac/dks370 PMID: 23042812.
    • (2013) J Antimicrob Chemother. , vol.68 , Issue.1 , pp. 74-83
    • Chmelnitsky, I.1    Shklyar, M.2    Hermesh, O.3    Navon-Venezia, S.4    Edgar, R.5    Carmeli, Y.6
  • 15
    • 84897487143 scopus 로고    scopus 로고
    • Molecular dissection of the evolution of carbapenem-resistant multilocus sequence type 258 Klebsiella pneumoniae
    • Epub 2014/03/19, PMID: 24639510
    • Deleo FR, Chen L, Porcella SF, Martens CA, Kobayashi SD, Porter AR, et al. Molecular dissection of the evolution of carbapenem-resistant multilocus sequence type 258 Klebsiella pneumoniae. Proc Natl Acad Sci U S A. 2014. Epub 2014/03/19. doi: 10.1073/pnas.1321364111 PMID: 24639510.
    • (2014) Proc Natl Acad Sci U S A.
    • DeLeo, F.R.1    Chen, L.2    Porcella, S.F.3    Martens, C.A.4    Kobayashi, S.D.5    Porter, A.R.6
  • 16
    • 84890116299 scopus 로고    scopus 로고
    • Development and validation of a multiplex PCR assay for identification of the epidemic ST-258/512 KPC-producing Klebsiella pneumoniae clone
    • PMID: 24231383
    • Adler A, Khabra E, Chmelnitsky I, Giakkoupi P, Vatopoulos A, Mathers AJ, et al. Development and validation of a multiplex PCR assay for identification of the epidemic ST-258/512 KPC-producing Klebsiella pneumoniae clone. Diagn Microbiol Infect Dis. 2014; 78(1):12-5. doi: 10.1016/j.diagmicrobio.2013.10.003 PMID: 24231383.
    • (2014) Diagn Microbiol Infect Dis. , vol.78 , Issue.1 , pp. 12-15
    • Adler, A.1    Khabra, E.2    Chmelnitsky, I.3    Giakkoupi, P.4    Vatopoulos, A.5    Mathers, A.J.6
  • 17
    • 84920154702 scopus 로고    scopus 로고
    • Genomic epidemiology of Klebsiella pneumoniae: The Italian scenario, and novel insights into the origin and global evolution of resistance to carbapenem antibiotics
    • PMID: 25367909
    • Gaiarsa S, Comandatore F, Gaibani P, Corbella M, Dalla Valle C, Epis S, et al. Genomic epidemiology of Klebsiella pneumoniae: the Italian scenario, and novel insights into the origin and global evolution of resistance to carbapenem antibiotics. Antimicrob Agents Chemother. 2014. doi: 10.1128/AAC.04224-14 PMID: 25367909.
    • (2014) Antimicrob Agents Chemother.
    • Gaiarsa, S.1    Comandatore, F.2    Gaibani, P.3    Corbella, M.4    Dalla Valle, C.5    Epis, S.6
  • 18
    • 84941245487 scopus 로고    scopus 로고
    • Extensive capsule locus variation and large-scale genomic recombination within the Klebsiella pneumoniae clonal group 258
    • PMID: 25861820
    • Wyres KL, Gorrie C, Edwards DJ, Wertheim HF, Hsu LY, Van Kinh N, et al. Extensive capsule locus variation and large-scale genomic recombination within the Klebsiella pneumoniae clonal group 258. Genome Biol Evol. 2015. doi: 10.1093/gbe/evv062 PMID: 25861820.
    • (2015) Genome Biol Evol.
    • Wyres, K.L.1    Gorrie, C.2    Edwards, D.J.3    Wertheim, H.F.4    Hsu, L.Y.5    Van Kinh, N.6
  • 20
    • 84904015627 scopus 로고    scopus 로고
    • Epidemic Klebsiella pneumoniae ST258 Is a Hybrid Strain
    • PMID: 24961694; PubMed Central PMCID: PMC4073492
    • Chen L, Mathema B, Pitout JD, DeLeo FR, Kreiswirth BN. Epidemic Klebsiella pneumoniae ST258 Is a Hybrid Strain. MBio. 2014; 5(3). doi: 10.1128/mBio.01355-14 PMID: 24961694; PubMed Central PMCID: PMC4073492.
    • (2014) MBio. , vol.5 , Issue.3
    • Chen, L.1    Mathema, B.2    Pitout, J.D.3    DeLeo, F.R.4    Kreiswirth, B.N.5
  • 21
    • 59749088655 scopus 로고    scopus 로고
    • First report on a hyperepidemic clone of KPC-3-producing Klebsiella pneumoniae in Israel genetically related to a strain causing outbreaks in the United States
    • Epub 2008/11/26, PMID: 19029323; PubMed Central PMCID: PMC2630632
    • Navon-Venezia S, Leavitt A, Schwaber MJ, Rasheed JK, Srinivasan A, Patel JB, et al. First report on a hyperepidemic clone of KPC-3-producing Klebsiella pneumoniae in Israel genetically related to a strain causing outbreaks in the United States. Antimicrob Agents Chemother. 2009; 53(2):818-20. Epub 2008/11/26. doi: 10.1128/AAC.00987-08 PMID: 19029323; PubMed Central PMCID: PMC2630632.
    • (2009) Antimicrob Agents Chemother. , vol.53 , Issue.2 , pp. 818-820
    • Navon-Venezia, S.1    Leavitt, A.2    Schwaber, M.J.3    Rasheed, J.K.4    Srinivasan, A.5    Patel, J.B.6
  • 22
    • 9644265318 scopus 로고    scopus 로고
    • Outbreak of Klebsiella pneumoniae producing a new carbapenem-hydrolyzing class A beta-lactamase, KPC-3, in a New York Medical Center
    • Epub 2004/11/25. doi: 48/12/4793 [pii] PMID: 15561858; PubMed Central PMCID: PMC529220
    • Woodford N, Tierno PM Jr., Young K, Tysall L, Palepou MF, Ward E, et al. Outbreak of Klebsiella pneumoniae producing a new carbapenem-hydrolyzing class A beta-lactamase, KPC-3, in a New York Medical Center. Antimicrob Agents Chemother. 2004; 48(12):4793-9. Epub 2004/11/25. doi: 48/12/4793 [pii] doi: 10.1128/AAC.48.12.4793-4799.2004 PMID: 15561858; PubMed Central PMCID: PMC529220.
    • (2004) Antimicrob Agents Chemother. , vol.48 , Issue.12 , pp. 4793-4799
    • Woodford, N.1    Tierno, P.M.2    Young, K.3    Tysall, L.4    Palepou, M.F.5    Ward, E.6
  • 23
    • 84865323065 scopus 로고    scopus 로고
    • Tracking a hospital outbreak of carbapenem-resistant Klebsiella pneumoniae with whole-genome sequencing
    • PMID: 22914622; PubMed Central PMCID: PMC3521604
    • Snitkin ES, Zelazny AM, Thomas PJ, Stock F, Group NCSP, Henderson DK, et al. Tracking a hospital outbreak of carbapenem-resistant Klebsiella pneumoniae with whole-genome sequencing. Science translational medicine. 2012; 4(148):148ra16. doi: 10.1126/scitranslmed.3004129 PMID: 22914622; PubMed Central PMCID: PMC3521604.
    • (2012) Science Translational Medicine. , vol.4 , Issue.148 , pp. 148ra16
    • Snitkin, E.S.1    Zelazny, A.M.2    Thomas, P.J.3    Stock, F.4    Group, N.C.S.P.5    Henderson, D.K.6
  • 24
    • 84941245488 scopus 로고    scopus 로고
    • Klebsiella pneumoniae carbapenemase in Australia: Detection of a KPC-producing clinical isolate at a Sydney hospital
    • Hobart, Tasmania, Australia: The Australian Society for Microbiology 2011 Annual Conference
    • Huntington P, Coatsworth N, Hardiman R, Hudson B, Kotsiou G, Fernandes C, editors. Klebsiella pneumoniae carbapenemase in Australia: detection of a KPC-producing clinical isolate at a Sydney hospital. The Australian Society for Microbiology 2011 Annual Conference; 2011; Hobart, Tasmania, Australia: The Australian Society for Microbiology 2011 Annual Conference.
    • (2011) The Australian Society for Microbiology 2011 Annual Conference
    • Huntington, P.1    Coatsworth, N.2    Hardiman, R.3    Hudson, B.4    Kotsiou, G.5    Fernandes, C.6
  • 26
    • 77951766490 scopus 로고    scopus 로고
    • Detection of the first two Klebsiella pneumoniae isolates with sequence type 258 producing KPC-2 carbapenemase in Denmark
    • PMID: 20206479
    • Hammerum AM, Hansen F, Lester CH, Jensen KT, Hansen DS, Dessau RB. Detection of the first two Klebsiella pneumoniae isolates with sequence type 258 producing KPC-2 carbapenemase in Denmark. Int J Antimicrob Agents. 2010; 35(6):610-2. doi: 10.1016/j.ijantimicag.2010.01.024 PMID: 20206479.
    • (2010) Int J Antimicrob Agents. , vol.35 , Issue.6 , pp. 610-612
    • Hammerum, A.M.1    Hansen, F.2    Lester, C.H.3    Jensen, K.T.4    Hansen, D.S.5    Dessau, R.B.6
  • 27
    • 70449637624 scopus 로고    scopus 로고
    • Emergence in Italy of Klebsiella pneumoniae sequence type 258 producing KPC-3 Carbapenemase
    • PMID: 19759220; PubMed Central PMCID: PMC2772625
    • Giani T, D'Andrea MM, Pecile P, Borgianni L, Nicoletti P, Tonelli F, et al. Emergence in Italy of Klebsiella pneumoniae sequence type 258 producing KPC-3 Carbapenemase. J Clin Microbiol. 2009; 47 (11):3793-4. doi: 10.1128/JCM.01773-09 PMID: 19759220; PubMed Central PMCID: PMC2772625.
    • (2009) J Clin Microbiol. , vol.47 , Issue.11 , pp. 3793-3794
    • Giani, T.1    D'Andrea, M.M.2    Pecile, P.3    Borgianni, L.4    Nicoletti, P.5    Tonelli, F.6
  • 28
    • 80054713167 scopus 로고    scopus 로고
    • Functional characterization of Tn4401, a Tn3-based transposon involved in blaKPC gene mobilization
    • Epub 2011/08/17. doi: AAC.05202-11 [pii] PMID: 21844325; PubMed Central PMCID: PMC3195030
    • Cuzon G, Naas T, Nordmann P. Functional characterization of Tn4401, a Tn3-based transposon involved in blaKPC gene mobilization. Antimicrob Agents Chemother. 2011; 55(11):5370-3. Epub 2011/08/17. doi: AAC.05202-11 [pii] doi: 10.1128/AAC.05202-11 PMID: 21844325; PubMed Central PMCID: PMC3195030.
    • (2011) Antimicrob Agents Chemother. , vol.55 , Issue.11 , pp. 5370-5373
    • Cuzon, G.1    Naas, T.2    Nordmann, P.3
  • 29
    • 84865421487 scopus 로고    scopus 로고
    • Role of ISKpn7 and deletions in blaKPC gene expression
    • Epub 2012/06/27. doi: AAC.00334-12 [pii] PMID: 22733068
    • Naas T, Cuzon G, Truong HV, Nordmann P. Role of ISKpn7 and deletions in blaKPC gene expression. Antimicrob Agents Chemother. 2012. Epub 2012/06/27. doi: AAC.00334-12 [pii] doi: 10.1128/AAC. 00334-12 PMID: 22733068.
    • Antimicrob Agents Chemother. , vol.2012
    • Naas, T.1    Cuzon, G.2    Truong, H.V.3    Nordmann, P.4
  • 30
    • 60649091495 scopus 로고    scopus 로고
    • Characterization of blaKPCcontaining Klebsiella pneumoniae isolates detected in different institutions in the Eastern USA
    • Epub 2009/01/22, PMID: 19155227; PubMed Central PMCID: PMC2640158
    • Endimiani A, Hujer AM, Perez F, Bethel CR, Hujer KM, Kroeger J, et al. Characterization of blaKPCcontaining Klebsiella pneumoniae isolates detected in different institutions in the Eastern USA. J Antimicrob Chemother. 2009; 63(3):427-37. Epub 2009/01/22. doi: 10.1093/jac/dkn547 PMID: 19155227; PubMed Central PMCID: PMC2640158.
    • (2009) J Antimicrob Chemother. , vol.63 , Issue.3 , pp. 427-437
    • Endimiani, A.1    Hujer, A.M.2    Perez, F.3    Bethel, C.R.4    Hujer, K.M.5    Kroeger, J.6
  • 31
    • 80053063330 scopus 로고    scopus 로고
    • Clonal dissemination of Klebsiella pneumoniae ST258 harbouring KPC-2 in Argentina
    • PMID: 21851480
    • Gomez SA, Pasteran FG, Faccone D, Tijet N, Rapoport M, Lucero C, et al. Clonal dissemination of Klebsiella pneumoniae ST258 harbouring KPC-2 in Argentina. Clin Microbiol Infect. 2011; 17 (10):1520-4. doi: 10.1111/j.1469-0691.2011.03600.x PMID: 21851480.
    • (2011) Clin Microbiol Infect. , vol.17 , Issue.10 , pp. 1520-1524
    • Gomez, S.A.1    Pasteran, F.G.2    Faccone, D.3    Tijet, N.4    Rapoport, M.5    Lucero, C.6
  • 32
    • 84858682206 scopus 로고    scopus 로고
    • Klebsiella pneumoniae ST258 producing KPC-3 identified in Italy carries novel plasmids and OmpK36/OmpK35 porin variants
    • Epub 2012/01/19. doi: AAC.05308-11 [pii], PMID: 22252815
    • Garcia-Fernandez A, Villa L, Carta C, Venditti C, Giordano A, Venditti M, et al. Klebsiella pneumoniae ST258 producing KPC-3 identified in Italy carries novel plasmids and OmpK36/OmpK35 porin variants. Antimicrob Agents Chemother. 2012. Epub 2012/01/19. doi: AAC.05308-11 [pii] doi: 10.1128/AAC. 05308-11 PMID: 22252815.
    • (2012) Antimicrob Agents Chemother.
    • Garcia-Fernandez, A.1    Villa, L.2    Carta, C.3    Venditti, C.4    Giordano, A.5    Venditti, M.6
  • 33
    • 77957350912 scopus 로고    scopus 로고
    • Complete nucleotide sequence of KPC-3-encoding plasmid pKpQIL in the epidemic Klebsiella pneumoniae sequence type 258
    • Epub 2010/08/11. doi: AAC.00175-10 [pii] doi: 10.1128/AAC.00175-10 PMID: 20696875; PubMed Central PMCID: PMC2944570
    • Leavitt A, Chmelnitsky I, Carmeli Y, Navon-Venezia S. Complete nucleotide sequence of KPC-3-encoding plasmid pKpQIL in the epidemic Klebsiella pneumoniae sequence type 258. Antimicrob Agents Chemother. 2010; 54(10):4493-6. Epub 2010/08/11. doi: AAC.00175-10 [pii] doi: 10.1128/AAC.00175-10 PMID: 20696875; PubMed Central PMCID: PMC2944570.
    • (2010) Antimicrob Agents Chemother. , vol.54 , Issue.10 , pp. 4493-4496
    • Leavitt, A.1    Chmelnitsky, I.2    Carmeli, Y.3    Navon-Venezia, S.4
  • 34
    • 84898636778 scopus 로고    scopus 로고
    • Comparative Genomic Analysis of KPC-Encoding pKpQIL-Like Plasmids and Their Distribution in New Jersey and New York Hospitals
    • PMID: 24614371
    • Chen L, Chavda KD, Melano RG, Jacobs MR, Koll B, Hong T, et al. Comparative Genomic Analysis of KPC-Encoding pKpQIL-Like Plasmids and Their Distribution in New Jersey and New York Hospitals. Antimicrob Agents Chemother. 2014; 58(5):2871-7. doi: 10.1128/AAC.00120-14 PMID: 24614371.
    • (2014) Antimicrob Agents Chemother. , vol.58 , Issue.5 , pp. 2871-2877
    • Chen, L.1    Chavda, K.D.2    Melano, R.G.3    Jacobs, M.R.4    Koll, B.5    Hong, T.6
  • 35
    • 84866437208 scopus 로고    scopus 로고
    • A Swordless Knight: The epidemiology and molecular characteristics of the blaKPC-negative sequence-type 258 Klebsiella pneumoniae clone
    • Epub 2012/07/21. doi: JCM.00987-12 [pii] PMID: 22814467
    • Adler A, Paikin S, Sterlin Y, Glick J, Edgar R, Aronov R, et al. A Swordless Knight: the epidemiology and molecular characteristics of the blaKPC-negative sequence-type 258 Klebsiella pneumoniae clone. J Clin Microbiol. 2012. Epub 2012/07/21. doi: JCM.00987-12 [pii] doi: 10.1128/JCM.00987-12 PMID: 22814467.
    • (2012) J Clin Microbiol.
    • Adler, A.1    Paikin, S.2    Sterlin, Y.3    Glick, J.4    Edgar, R.5    Aronov, R.6
  • 36
    • 84867519652 scopus 로고    scopus 로고
    • Antimicrobial treatment and containment measures for an extremely drug-resistant Klebsiella pneumoniae ST101 isolate carrying pKPN101-IT, a novel fully sequenced bla(KPC-2) plasmid
    • Epub 2012/09/14, 01892-12 [pii] PMID: 22972824; PubMed Central PMCID: PMC3486238
    • Frasson I, Lavezzo E, Franchin E, Toppo S, Barzon L, Cavallaro A, et al. Antimicrobial treatment and containment measures for an extremely drug-resistant Klebsiella pneumoniae ST101 isolate carrying pKPN101-IT, a novel fully sequenced bla(KPC-2) plasmid. J Clin Microbiol. 2012; 50(11):3768-72. Epub 2012/09/14. doi: 10.1128/JCM.01892-12 JCM.01892-12 [pii]. PMID: 22972824; PubMed Central PMCID: PMC3486238.
    • (2012) J Clin Microbiol. , vol.50 , Issue.11 , pp. 3768-3772
    • Frasson, I.1    Lavezzo, E.2    Franchin, E.3    Toppo, S.4    Barzon, L.5    Cavallaro, A.6
  • 37
    • 79956018427 scopus 로고    scopus 로고
    • Plasmid comparison and molecular analysis of Klebsiella pneumoniae harbouring bla(KPC) from New York City and Toronto
    • Epub 2011/03/17. doi: dkr092 [pii], PMID: 21406433
    • Mataseje LF, Boyd DA, Willey BM, Prayitno N, Kreiswirth N, Gelosia A, et al. Plasmid comparison and molecular analysis of Klebsiella pneumoniae harbouring bla(KPC) from New York City and Toronto. J Antimicrob Chemother. 2011; 66(6):1273-7. Epub 2011/03/17. doi: dkr092 [pii] doi: 10.1093/jac/dkr092 PMID: 21406433.
    • (2011) J Antimicrob Chemother. , vol.66 , Issue.6 , pp. 1273-1277
    • Mataseje, L.F.1    Boyd, D.A.2    Willey, B.M.3    Prayitno, N.4    Kreiswirth, N.5    Gelosia, A.6
  • 38
    • 77956126698 scopus 로고    scopus 로고
    • Complete nucleotide sequence of Klebsiella pneumoniae multidrug resistance plasmid pKP048, carrying blaKPC-2, blaDHA-1, qnrB4, and armA
    • Epub 2010/06/16. doi: AAC.00137-10 [pii], PMID: 20547789; PubMed Central PMCID: PMC2934982
    • Jiang Y, Yu D, Wei Z, Shen P, Zhou Z, Yu Y. Complete nucleotide sequence of Klebsiella pneumoniae multidrug resistance plasmid pKP048, carrying blaKPC-2, blaDHA-1, qnrB4, and armA. Antimicrob Agents Chemother. 2010; 54(9):3967-9. Epub 2010/06/16. doi: AAC.00137-10 [pii] doi: 10.1128/AAC. 00137-10 PMID: 20547789; PubMed Central PMCID: PMC2934982.
    • (2010) Antimicrob Agents Chemother. , vol.54 , Issue.9 , pp. 3967-3969
    • Jiang, Y.1    Yu, D.2    Wei, Z.3    Shen, P.4    Zhou, Z.5    Yu, Y.6
  • 39
    • 84866014803 scopus 로고    scopus 로고
    • Escherichia coli ST502 and Klebsiella pneumoniae ST11 sharing an IncW plasmid harbouring the bla (KPC-2) gene in an Intensive Care Unit patient
    • Epub 2012/07/24, PMID: 22817916
    • Almeida AC, de Sa Cavalcanti FL, Vilela MA, Gales AC, de Morais MA Jr., Camargo de Morais MM. Escherichia coli ST502 and Klebsiella pneumoniae ST11 sharing an IncW plasmid harbouring the bla (KPC-2) gene in an Intensive Care Unit patient. Int J Antimicrob Agents. 2012; 40(4):374-6. Epub 2012/07/24. doi: 10.1016/j.ijantimicag.2012.05.022 PMID: 22817916.
    • (2012) Int J Antimicrob Agents. , vol.40 , Issue.4 , pp. 374-376
    • Almeida, A.C.1    De Sa Cavalcanti, F.L.2    Vilela, M.A.3    Gales, A.C.4    De Morais, M.A.5    Camargo De Morais, M.M.6
  • 40
    • 84903121012 scopus 로고    scopus 로고
    • Comparative analysis of Klebsiella pneumoniae genomes identifies a phospholipase D family protein as a novel virulence factor
    • PMID: 24885329; PubMed Central PMCID: PMC4068068
    • Lery LM, Frangeul L, Tomas A, Passet V, Almeida AS, Bialek-Davenet S, et al. Comparative analysis of Klebsiella pneumoniae genomes identifies a phospholipase D family protein as a novel virulence factor. BMC Biol. 2014; 12:41. doi: 10.1186/1741-7007-12-41 PMID: 24885329; PubMed Central PMCID: PMC4068068.
    • (2014) BMC Biol. , vol.12 , pp. 41
    • Lery, L.M.1    Frangeul, L.2    Tomas, A.3    Passet, V.4    Almeida, A.S.5    Bialek-Davenet, S.6
  • 41
    • 79951505770 scopus 로고    scopus 로고
    • Molecular mechanisms of ligand-mediated attenuation of DNA binding by MarR family transcriptional regulators
    • PMID: 20716550
    • Perera IC, Grove A. Molecular mechanisms of ligand-mediated attenuation of DNA binding by MarR family transcriptional regulators. Journal of molecular cell biology. 2010; 2(5):243-54. doi: 10.1093/jmcb/mjq021 PMID: 20716550.
    • (2010) Journal of Molecular Cell Biology. , vol.2 , Issue.5 , pp. 243-254
    • Perera, I.C.1    Grove, A.2
  • 42
    • 0036897619 scopus 로고    scopus 로고
    • Regulation of bacterial drug export systems
    • table of contents, PMID: 12456787; PubMed Central PMCID: PMC134658
    • Grkovic S, Brown MH, Skurray RA. Regulation of bacterial drug export systems. Microbiology and molecular biology reviews: MMBR. 2002; 66(4):671-701, table of contents. PMID: 12456787; PubMed Central PMCID: PMC134658.
    • (2002) Microbiology and Molecular Biology Reviews: MMBR. , vol.66 , Issue.4 , pp. 671-701
    • Grkovic, S.1    Brown, M.H.2    Skurray, R.A.3
  • 43
    • 84926035587 scopus 로고    scopus 로고
    • The challenge of efflux-mediated antibiotic resistance in Gram-negative bacteria
    • PMID: 25788514
    • Li XZ, Plesiat P, Nikaido H. The challenge of efflux-mediated antibiotic resistance in Gram-negative bacteria. Clin Microbiol Rev. 2015; 28(2):337-418. doi: 10.1128/CMR.00117-14 PMID: 25788514.
    • (2015) Clin Microbiol Rev. , vol.28 , Issue.2 , pp. 337-418
    • Li, X.Z.1    Plesiat, P.2    Nikaido, H.3
  • 44
    • 84891013485 scopus 로고    scopus 로고
    • The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli
    • PMID: 24185215
    • Hao Z, Lou H, Zhu R, Zhu J, Zhang D, Zhao BS, et al. The multiple antibiotic resistance regulator MarR is a copper sensor in Escherichia coli. Nature chemical biology. 2014; 10(1):21-8. doi: 10.1038/nchembio.1380 PMID: 24185215.
    • (2014) Nature Chemical Biology. , vol.10 , Issue.1 , pp. 21-28
    • Hao, Z.1    Lou, H.2    Zhu, R.3    Zhu, J.4    Zhang, D.5    Zhao, B.S.6
  • 45
    • 84939984183 scopus 로고    scopus 로고
    • Genetic characterisation of clinical Klebsiella pneumoniae isolates with reduced susceptibility to tigecycline: Role of the global regulator RamA and its local repressor RamR
    • PMID: 25681067
    • Wang X, Chen H, Zhang Y, Wang Q, Zhao C, Li H, et al. Genetic characterisation of clinical Klebsiella pneumoniae isolates with reduced susceptibility to tigecycline: Role of the global regulator RamA and its local repressor RamR. Int J Antimicrob Agents. 2015. doi: 10.1016/j.ijantimicag.2014.12.022 PMID: 25681067.
    • (2015) Int J Antimicrob Agents.
    • Wang, X.1    Chen, H.2    Zhang, Y.3    Wang, Q.4    Zhao, C.5    Li, H.6
  • 46
    • 84923841890 scopus 로고    scopus 로고
    • Elucidation of the RamA Regulon in Klebsiella pneumoniae Reveals a Role in LPS Regulation
    • PMID: 25633080; PubMed Central PMCID: PMC4310594
    • De Majumdar S, Yu J, Fookes M, McAteer SP, Llobet E, Finn S, et al. Elucidation of the RamA Regulon in Klebsiella pneumoniae Reveals a Role in LPS Regulation. PLoS pathogens. 2015; 11(1):e1004627. doi: 10.1371/journal.ppat.1004627 PMID: 25633080; PubMed Central PMCID: PMC4310594.
    • (2015) PLoS Pathogens. , vol.11 , Issue.1 , pp. e1004627
    • De Majumdar, S.1    Yu, J.2    Fookes, M.3    McAteer, S.P.4    Llobet, E.5    Finn, S.6
  • 47
    • 84918782249 scopus 로고    scopus 로고
    • First emergence of acrAB and oqxAB mediated tigecycline resistance in clinical isolates of Klebsiella pneumoniae pre-dating the use of tigecycline in a Chinese hospital
    • PMID: 25503276; PubMed Central PMCID: PMC4264890
    • Zhong X, Xu H, Chen D, Zhou H, Hu X, Cheng G. First emergence of acrAB and oqxAB mediated tigecycline resistance in clinical isolates of Klebsiella pneumoniae pre-dating the use of tigecycline in a Chinese hospital. PLoS One. 2014; 9(12):e115185. doi: 10.1371/journal.pone.0115185 PMID: 25503276; PubMed Central PMCID: PMC4264890.
    • (2014) PLoS One. , vol.9 , Issue.12 , pp. e115185
    • Zhong, X.1    Xu, H.2    Chen, D.3    Zhou, H.4    Hu, X.5    Cheng, G.6
  • 48
    • 4344614478 scopus 로고    scopus 로고
    • Plasmid-encoded multidrug efflux pump conferring resistance to olaquindox in Escherichia coli
    • PMID: 15328093; PubMed Central PMCID: PMC514751
    • Hansen LH, Johannesen E, Burmolle M, Sorensen AH, Sorensen SJ. Plasmid-encoded multidrug efflux pump conferring resistance to olaquindox in Escherichia coli. Antimicrob Agents Chemother. 2004; 48(9):3332-7. doi: 10.1128/AAC.48.9.3332-3337.2004 PMID: 15328093; PubMed Central PMCID: PMC514751.
    • (2004) Antimicrob Agents Chemother. , vol.48 , Issue.9 , pp. 3332-3337
    • Hansen, L.H.1    Johannesen, E.2    Burmolle, M.3    Sorensen, A.H.4    Sorensen, S.J.5
  • 49
    • 84882302963 scopus 로고    scopus 로고
    • OqxAB, a quinolone and olaquindox efflux pump, is widely distributed among multidrug-resistant Klebsiella pneumoniae isolates of human origin
    • PMID: 23817374; PubMed Central PMCID: PMC3754307
    • Perez F, Rudin SD, Marshall SH, Coakley P, Chen L, Kreiswirth BN, et al. OqxAB, a quinolone and olaquindox efflux pump, is widely distributed among multidrug-resistant Klebsiella pneumoniae isolates of human origin. Antimicrob Agents Chemother. 2013; 57(9):4602-3. doi: 10.1128/AAC.00725-13 PMID: 23817374; PubMed Central PMCID: PMC3754307.
    • (2013) Antimicrob Agents Chemother. , vol.57 , Issue.9 , pp. 4602-4603
    • Perez, F.1    Rudin, S.D.2    Marshall, S.H.3    Coakley, P.4    Chen, L.5    Kreiswirth, B.N.6
  • 50
    • 84964301249 scopus 로고    scopus 로고
    • Differential contribution of AcrAB and OqxAB efflux pumps to multidrug resistance and virulence in Klebsiella pneumoniae
    • PMID: 25193085
    • Bialek-Davenet S, Lavigne JP, Guyot K, Mayer N, Tournebize R, Brisse S, et al. Differential contribution of AcrAB and OqxAB efflux pumps to multidrug resistance and virulence in Klebsiella pneumoniae. J Antimicrob Chemother. 2015; 70(1):81-8. doi: 10.1093/jac/dku340 PMID: 25193085.
    • (2015) J Antimicrob Chemother. , vol.70 , Issue.1 , pp. 81-88
    • Bialek-Davenet, S.1    Lavigne, J.P.2    Guyot, K.3    Mayer, N.4    Tournebize, R.5    Brisse, S.6
  • 51
    • 84864388734 scopus 로고    scopus 로고
    • Characterization of RarA, a novel AraC family multidrug resistance regulator in Klebsiella pneumoniae
    • PMID: 22644028; PubMed Central PMCID: PMC3421627
    • Veleba M, Higgins PG, Gonzalez G, Seifert H, Schneiders T. Characterization of RarA, a novel AraC family multidrug resistance regulator in Klebsiella pneumoniae. Antimicrob Agents Chemother. 2012; 56(8):4450-8. doi: 10.1128/AAC.00456-12 PMID: 22644028; PubMed Central PMCID: PMC3421627.
    • (2012) Antimicrob Agents Chemother. , vol.56 , Issue.8 , pp. 4450-4458
    • Veleba, M.1    Higgins, P.G.2    Gonzalez, G.3    Seifert, H.4    Schneiders, T.5
  • 52
    • 84879226505 scopus 로고    scopus 로고
    • Klebsiella pneumoniae targets an EGF receptor-dependent pathway to subvert inflammation
    • PMID: 23347154
    • Frank CG, Reguerio V, Rother M, Moranta D, Maeurer AP, Garmendia J, et al. Klebsiella pneumoniae targets an EGF receptor-dependent pathway to subvert inflammation. Cellular microbiology. 2013; 15 (7):1212-33. doi: 10.1111/cmi.12110 PMID: 23347154.
    • (2013) Cellular Microbiology. , vol.15 , Issue.7 , pp. 1212-1233
    • Frank, C.G.1    Reguerio, V.2    Rother, M.3    Moranta, D.4    Maeurer, A.P.5    Garmendia, J.6
  • 53
    • 84857848875 scopus 로고    scopus 로고
    • Fisher scientific award lecture-The capsular polysaccharides of Group B Streptococcus and Streptococcus suis differently modulate bacterial interactions with dendritic cells
    • PMID: 22356626
    • Segura M. Fisher scientific award lecture-the capsular polysaccharides of Group B Streptococcus and Streptococcus suis differently modulate bacterial interactions with dendritic cells. Canadian journal of microbiology. 2012; 58(3):249-60. doi: 10.1139/w2012-003 PMID: 22356626.
    • (2012) Canadian Journal of Microbiology. , vol.58 , Issue.3 , pp. 249-260
    • Segura, M.1
  • 54
    • 0036221733 scopus 로고    scopus 로고
    • Outer membrane proteins: Key players for bacterial adaptation in host niches
    • PMID: 11909743
    • Lin J, Huang S, Zhang Q. Outer membrane proteins: key players for bacterial adaptation in host niches. Microbes and infection /Institut Pasteur. 2002; 4(3):325-31. PMID: 11909743.
    • (2002) Microbes and Infection /Institut Pasteur. , vol.4 , Issue.3 , pp. 325-331
    • Lin, J.1    Huang, S.2    Zhang, Q.3
  • 55
    • 84874066976 scopus 로고    scopus 로고
    • Role of bacterial surface structures on the interaction of Klebsiella pneumoniae with phagocytes
    • PMID: 23457627; PubMed Central PMCID: PMC3574025
    • March C, Cano V, Moranta D, Llobet E, Perez-Gutierrez C, Tomas JM, et al. Role of bacterial surface structures on the interaction of Klebsiella pneumoniae with phagocytes. PLoS One. 2013; 8(2):e56847. doi: 10.1371/journal.pone.0056847 PMID: 23457627; PubMed Central PMCID: PMC3574025.
    • (2013) PLoS One. , vol.8 , Issue.2 , pp. e56847
    • March, C.1    Cano, V.2    Moranta, D.3    Llobet, E.4    Perez-Gutierrez, C.5    Tomas, J.M.6
  • 56
    • 34347406730 scopus 로고    scopus 로고
    • A molecular Swiss army knife: OmpA structure, function and expression
    • PMID: 17559395
    • Smith SG, Mahon V, Lambert MA, Fagan RP. A molecular Swiss army knife: OmpA structure, function and expression. FEMS microbiology letters. 2007; 273(1):1-11. doi: 10.1111/j.1574-6968.2007.00778. x PMID: 17559395.
    • (2007) FEMS Microbiology Letters. , vol.273 , Issue.1 , pp. 1-11
    • Smith, S.G.1    Mahon, V.2    Lambert, M.A.3    Fagan, R.P.4
  • 57
    • 80052867045 scopus 로고    scopus 로고
    • OmpK26, a novel porin associated with carbapenem resistance in Klebsiella pneumoniae
    • PMID: 21807980; PubMed Central PMCID: PMC3186958
    • Garcia-Sureda L, Domenech-Sanchez A, Barbier M, Juan C, Gasco J, Alberti S. OmpK26, a novel porin associated with carbapenem resistance in Klebsiella pneumoniae. Antimicrob Agents Chemother. 2011; 55(10):4742-7. doi: 10.1128/AAC.00309-11 PMID: 21807980; PubMed Central PMCID: PMC3186958.
    • (2011) Antimicrob Agents Chemother. , vol.55 , Issue.10 , pp. 4742-4747
    • Garcia-Sureda, L.1    Domenech-Sanchez, A.2    Barbier, M.3    Juan, C.4    Gasco, J.5    Alberti, S.6
  • 58
    • 77957338681 scopus 로고    scopus 로고
    • Genetic factors associated with elevated carbapenem resistance in KPC-producing Klebsiella pneumoniae
    • Epub 2010/07/28. doi: AAC.00008-10 [pii] doi: 10.1128/AAC.00008-10 PMID: 20660684; PubMed Central PMCID: PMC2944623
    • Kitchel B, Rasheed JK, Endimiani A, Hujer AM, Anderson KF, Bonomo RA, et al. Genetic factors associated with elevated carbapenem resistance in KPC-producing Klebsiella pneumoniae. Antimicrob Agents Chemother. 2010; 54(10):4201-7. Epub 2010/07/28. doi: AAC.00008-10 [pii] doi: 10.1128/AAC.00008-10 PMID: 20660684; PubMed Central PMCID: PMC2944623.
    • (2010) Antimicrob Agents Chemother. , vol.54 , Issue.10 , pp. 4201-4207
    • Kitchel, B.1    Rasheed, J.K.2    Endimiani, A.3    Hujer, A.M.4    Anderson, K.F.5    Bonomo, R.A.6
  • 60
    • 33749530046 scopus 로고    scopus 로고
    • High-level carbapenem resistance in a Klebsiella pneumoniae clinical isolate is due to the combination of bla(ACT-1) beta-lactamase production, porin OmpK35/36 insertional inactivation, and down-regulation of the phosphate transport porin phoe
    • PMID: 17005822; PubMed Central PMCID: PMC1610099
    • Kaczmarek FM, Dib-Hajj F, Shang W, Gootz TD. High-level carbapenem resistance in a Klebsiella pneumoniae clinical isolate is due to the combination of bla(ACT-1) beta-lactamase production, porin OmpK35/36 insertional inactivation, and down-regulation of the phosphate transport porin phoe. Antimicrob Agents Chemother. 2006; 50(10):3396-406. doi: 10.1128/AAC.00285-06 PMID: 17005822; PubMed Central PMCID: PMC1610099.
    • (2006) Antimicrob Agents Chemother. , vol.50 , Issue.10 , pp. 3396-3406
    • Kaczmarek, F.M.1    Dib-Hajj, F.2    Shang, W.3    Gootz, T.D.4
  • 61
    • 84908255395 scopus 로고    scopus 로고
    • The emergence of bacterial "hopeful monsters"
    • PMID: 25073645; PubMed Central PMCID: PMC4128365
    • Croucher NJ, Klugman KP. The emergence of bacterial "hopeful monsters". MBio. 2014; 5(4):e01550-14 doi: 10.1128/mBio.01550-14 PMID: 25073645; PubMed Central PMCID: PMC4128365.
    • (2014) MBio. , vol.5 , Issue.4 , pp. e01550-e01614
    • Croucher, N.J.1    Klugman, K.P.2
  • 62
    • 75749083649 scopus 로고    scopus 로고
    • An outbreak of infection due to beta-Lactamase Klebsiella pneumoniae Carbapenemase 2-producing K. Pneumoniae in a Greek University Hospital: Molecular characterization, epidemiology, and outcomes
    • PMID: 20041768
    • Souli M, Galani I, Antoniadou A, Papadomichelakis E, Poulakou G, Panagea T, et al. An outbreak of infection due to beta-Lactamase Klebsiella pneumoniae Carbapenemase 2-producing K. pneumoniae in a Greek University Hospital: molecular characterization, epidemiology, and outcomes. Clin Infect Dis. 2010; 50(3):364-73. doi: 10.1086/649865 PMID: 20041768.
    • (2010) Clin Infect Dis. , vol.50 , Issue.3 , pp. 364-373
    • Souli, M.1    Galani, I.2    Antoniadou, A.3    Papadomichelakis, E.4    Poulakou, G.5    Panagea, T.6
  • 63
    • 84941245490 scopus 로고    scopus 로고
    • America TSfHEo. Large Veteran Health Administration Study Shows 'Last Resort', TX2011 [cited 2014 Aug 12]
    • America TSfHEo. Large Veteran Health Administration Study Shows 'Last Resort' Antibiotics Use on the Rise Dallas, TX2011 [cited 2014 Aug 12]. Available: http://www.shea-online.org/View/smid/428/ArticleID/72.aspx.
    • Antibiotics Use on the Rise Dallas
  • 64
    • 79953222226 scopus 로고    scopus 로고
    • Klebsiella pneumoniae outer membrane porins OmpK35 and OmpK36 play roles in both antimicrobial resistance and virulence
    • PMID: 21282452; PubMed Central PMCID: PMC3067157
    • Tsai YK, Fung CP, Lin JC, Chen JH, Chang FY, Chen TL, et al. Klebsiella pneumoniae outer membrane porins OmpK35 and OmpK36 play roles in both antimicrobial resistance and virulence. Antimicrob Agents Chemother. 2011; 55(4):1485-93. doi: 10.1128/AAC.01275-10 PMID: 21282452; PubMed Central PMCID: PMC3067157.
    • (2011) Antimicrob Agents Chemother. , vol.55 , Issue.4 , pp. 1485-1493
    • Tsai, Y.K.1    Fung, C.P.2    Lin, J.C.3    Chen, J.H.4    Chang, F.Y.5    Chen, T.L.6
  • 66
    • 77956295988 scopus 로고    scopus 로고
    • The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
    • PMID: 20644199; PubMed Central PMCID: PMC2928508
    • McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, et al. The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res. 2010; 20(9):1297-303. doi: 10.1101/gr.107524.110 PMID: 20644199; PubMed Central PMCID: PMC2928508.
    • (2010) Genome Res. , vol.20 , Issue.9 , pp. 1297-1303
    • McKenna, A.1    Hanna, M.2    Banks, E.3    Sivachenko, A.4    Cibulskis, K.5    Kernytsky, A.6
  • 67
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Epub 2011/05/07. doi: msr121 [pii] doi: 10.1093/molbev/msr121 PMID: 21546353; PubMed Central PMCID: PMC3203626
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011; 28(10):2731-9. Epub 2011/05/07. doi: msr121 [pii] doi: 10.1093/molbev/msr121 PMID: 21546353; PubMed Central PMCID: PMC3203626.
    • (2011) Mol Biol Evol. , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 68
    • 1042304216 scopus 로고    scopus 로고
    • APE: Analyses of Phylogenetics and Evolution in R language
    • PMID: 14734327
    • Paradis E, Claude J, Strimmer K. APE: Analyses of Phylogenetics and Evolution in R language. Bioinformatics. 2004; 20(2):289-90. PMID: 14734327.
    • (2004) Bioinformatics. , vol.20 , Issue.2 , pp. 289-290
    • Paradis, E.1    Claude, J.2    Strimmer, K.3
  • 69
    • 79960004119 scopus 로고    scopus 로고
    • Interactive Tree of Life v2: Online annotation and display of phylogenetic trees made easy
    • PMID: 21470960; PubMed Central PMCID: PMC3125724
    • Letunic I, Bork P. Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy. Nucleic acids research. 2011; 39(Web Server issue):W475-8. doi: 10.1093/nar/gkr201 PMID: 21470960; PubMed Central PMCID: PMC3125724.
    • (2011) Nucleic Acids Research. , vol.39 , pp. W475-W478
    • Letunic, I.1    Bork, P.2
  • 70
    • 84864530626 scopus 로고    scopus 로고
    • Bayesian phylogenetics with BEAUti and the BEAST 1.7
    • Epub 2012/03/01, PMID: 22367748; PubMed Central PMCID: PMC3408070
    • Drummond AJ, Suchard MA, Xie D, Rambaut A. Bayesian phylogenetics with BEAUti and the BEAST 1.7. Mol Biol Evol. 2012; 29(8):1969-73. Epub 2012/03/01. doi: 10.1093/molbev/mss075 PMID: 22367748; PubMed Central PMCID: PMC3408070.
    • (2012) Mol Biol Evol. , vol.29 , Issue.8 , pp. 1969-1973
    • Drummond, A.J.1    Suchard, M.A.2    Xie, D.3    Rambaut, A.4
  • 72
    • 84867587461 scopus 로고    scopus 로고
    • Identification of acquired antimicrobial resistance genes
    • PMID: 22782487; PubMed Central PMCID: PMC3468078
    • Zankari E, Hasman H, Cosentino S, Vestergaard M, Rasmussen S, Lund O, et al. Identification of acquired antimicrobial resistance genes. J Antimicrob Chemother. 2012; 67(11):2640-4. doi: 10.1093/jac/dks261 PMID: 22782487; PubMed Central PMCID: PMC3468078.
    • (2012) J Antimicrob Chemother. , vol.67 , Issue.11 , pp. 2640-2644
    • Zankari, E.1    Hasman, H.2    Cosentino, S.3    Vestergaard, M.4    Rasmussen, S.5    Lund, O.6
  • 74
    • 84905049901 scopus 로고    scopus 로고
    • Trimmomatic: A flexible trimmer for Illumina Sequence Data
    • PMID: 24695404
    • Bolger AM, Lohse M, Usadel B. Trimmomatic: A flexible trimmer for Illumina Sequence Data. Bioinformatics. 2014. doi: 10.1093/bioinformatics/btu170 PMID: 24695404.
    • (2014) Bioinformatics.
    • Bolger, A.M.1    Lohse, M.2    Usadel, B.3
  • 75
    • 85043341975 scopus 로고    scopus 로고
    • Available from Biomatters Ltd
    • Geneious. Available from Biomatters Ltd. Available: http://www.geneious.com. 2013.
    • (2013) Geneious
  • 76
    • 84921896304 scopus 로고    scopus 로고
    • Identification of Capsular Types in Carbapenem-Resistant Klebsiella pneumoniae Strains by wzc Sequencing and Implications for Capsule Depolymerase Treatment
    • PMID: 25451047
    • Pan YJ, Lin TL, Lin YT, Su PA, Chen CT, Hsieh PF, et al. Identification of Capsular Types in Carbapenem-Resistant Klebsiella pneumoniae Strains by wzc Sequencing and Implications for Capsule Depolymerase Treatment. Antimicrob Agents Chemother. 2015; 59(2):1038-47. doi: 10.1128/AAC.03560-14 PMID: 25451047.
    • (2015) Antimicrob Agents Chemother. , vol.59 , Issue.2 , pp. 1038-1047
    • Pan, Y.J.1    Lin, T.L.2    Lin, Y.T.3    Su, P.A.4    Chen, C.T.5    Hsieh, P.F.6
  • 77
    • 84889784380 scopus 로고    scopus 로고
    • Wzi Gene sequencing, a rapid method for determination of capsular type for Klebsiella strains
    • PMID: 24088853; PubMed Central PMCID: PMC3838100
    • Brisse S, Passet V, Haugaard AB, Babosan A, Kassis-Chikhani N, Struve C, et al. wzi Gene sequencing, a rapid method for determination of capsular type for Klebsiella strains. J Clin Microbiol. 2013; 51 (12):4073-8. doi: 10.1128/JCM.01924-13 PMID: 24088853; PubMed Central PMCID: PMC3838100.
    • (2013) J Clin Microbiol. , vol.51 , Issue.12 , pp. 4073-4078
    • Brisse, S.1    Passet, V.2    Haugaard, A.B.3    Babosan, A.4    Kassis-Chikhani, N.5    Struve, C.6
  • 78
    • 31344443334 scopus 로고    scopus 로고
    • Ligand-responsive transcriptional regulation by members of the MarR family of winged helix proteins
    • PMID: 16450885
    • Wilkinson SP, Grove A. Ligand-responsive transcriptional regulation by members of the MarR family of winged helix proteins. Current issues in molecular biology. 2006; 8(1):51-62. PMID: 16450885.
    • (2006) Current Issues in Molecular Biology. , vol.8 , Issue.1 , pp. 51-62
    • Wilkinson, S.P.1    Grove, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.