-
2
-
-
84882712084
-
Clinical epidemiology of the global expansion of Klebsiella pneumoniae carbapenemases
-
Munoz-Price LS, Poirel L, Bonomo RA, Schwaber MJ, Daikos GL, Cormican M, Cornaglia G, Garau J, Gniadkowski M, Hayden MK, Kumarasamy K, Livermore DM, Maya JJ, Nordmann P, Patel JB, Paterson DL, Pitout J, Villegas MV, Wang H, Woodford N, Quinn JP. 2013. Clinical epidemiology of the global expansion of Klebsiella pneumoniae carbapenemases. Lancet Infect. Dis. 13:785-796. http://dx.doi.org/10.1016/S1473-3099(13)70190-7.
-
(2013)
Lancet Infect. Dis
, vol.13
, pp. 785-796
-
-
Munoz-Price, L.S.1
Poirel, L.2
Bonomo, R.A.3
Schwaber, M.J.4
Daikos, G.L.5
Cormican, M.6
Cornaglia, G.7
Garau, J.8
Gniadkowski, M.9
Hayden, M.K.10
Kumarasamy, K.11
Livermore, D.M.12
Maya, J.J.13
Nordmann, P.14
Patel, J.B.15
Paterson, D.L.16
Pitout, J.17
Villegas, M.V.18
Wang, H.19
Woodford, N.20
Quinn, J.P.21
more..
-
3
-
-
84897487143
-
Molecular dissection of the evolution of carbapenem-resistant multilocus sequence type 258 Klebsiella pneumoniae
-
Deleo FR, Chen L, Porcella SF, Martens CA, Kobayashi SD, Porter AR, Chavda KD, Jacobs MR, Mathema B, Olsen RJ, Bonomo RA, Musser JM, Kreiswirth BN. 2014. Molecular dissection of the evolution of carbapenem-resistant multilocus sequence type 258 Klebsiella pneumoniae. Proc. Natl. Acad. Sci. U. S. A. 111:4988-4993. http://dx.doi.org/10.1073/pnas.1321364111.
-
(2014)
Proc. Natl. Acad. Sci. U. S. A
, vol.111
, pp. 4988-4993
-
-
Deleo, F.R.1
Chen, L.2
Porcella, S.F.3
Martens, C.A.4
Kobayashi, S.D.5
Porter, A.R.6
Chavda, K.D.7
Jacobs, M.R.8
Mathema, B.9
Olsen, R.J.10
Bonomo, R.A.11
Musser, J.M.12
Kreiswirth, B.N.13
-
4
-
-
84904015627
-
Epidemic Klebsiella pneumoniae ST258 is a hybrid strain
-
Chen L, Mathema B, Pitout JD, DeLeo FR, Kreiswirth BN. 2014. Epidemic Klebsiella pneumoniae ST258 is a hybrid strain. mBio 5(3): e01355-14.
-
(2014)
mBio
, vol.5
, Issue.3
-
-
Chen, L.1
Mathema, B.2
Pitout, J.D.3
Deleo, F.R.4
Kreiswirth, B.N.5
-
5
-
-
33645774644
-
Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes
-
Bentley SD, Aanensen DM, Mavroidi A, Saunders D, Rabbinowitsch E, Collins M, Donohoe K, Harris D, Murphy L, Quail MA, Samuel G, Skovsted IC, Kaltoft MS, Barrell B, Reeves PR, Parkhill J, Spratt BG. 2006. Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes. PLoS Genet. 2:e31. http://dx.doi.org/10.1371/journal.pgen.0020031.
-
(2006)
PLoS Genet
, vol.2
, pp. e31
-
-
Bentley, S.D.1
Aanensen, D.M.2
Mavroidi, A.3
Saunders, D.4
Rabbinowitsch, E.5
Collins, M.6
Donohoe, K.7
Harris, D.8
Murphy, L.9
Quail, M.A.10
Samuel, G.11
Skovsted, I.C.12
Kaltoft, M.S.13
Barrell, B.14
Reeves, P.R.15
Parkhill, J.16
Spratt, B.G.17
-
6
-
-
0025797688
-
Horizontal transfer of multiple penicillin-binding protein genes, and capsular biosynthetic genes, in natural populations of Streptococcus pneumoniae
-
Coffey TJ, Dowson CG, Daniels M, Zhou J, Martin C, Spratt BG, Musser JM. 1991. Horizontal transfer of multiple penicillin-binding protein genes, and capsular biosynthetic genes, in natural populations of Streptococcus pneumoniae. Mol. Microbiol. 5:2255-2260. http://dx.doi.org/10.1111/j.1365-2958.1991.tb02155.x.
-
(1991)
Mol. Microbiol
, vol.5
, pp. 2255-2260
-
-
Coffey, T.J.1
Dowson, C.G.2
Daniels, M.3
Zhou, J.4
Martin, C.5
Spratt, B.G.6
Musser, J.M.7
-
7
-
-
79251544864
-
Rapid pneumococcal evolution in response to clinical interventions
-
Croucher NJ, Harris SR, Fraser C, Quail MA, Burton J, van der Linden M, McGee L, von Gottberg A, Song JH, Ko KS, Pichon B, Baker S, Parry CM, Lambertsen LM, Shahinas D, Pillai DR, Mitchell TJ, Dougan G, Tomasz A, Klugman KP, Parkhill J, Hanage WP, Bentley SD. 2011. Rapid pneumococcal evolution in response to clinical interventions. Science 331:430-434. http://dx.doi.org/10.1126/science.1198545.
-
(2011)
Science
, vol.331
, pp. 430-434
-
-
Croucher, N.J.1
Harris, S.R.2
Fraser, C.3
Quail, M.A.4
Burton, J.5
Van Der Linden, M.6
McGee, L.7
Von Gottberg, A.8
Song, J.H.9
Ko, K.S.10
Pichon, B.11
Baker, S.12
Parry, C.M.13
Lambertsen, L.M.14
Shahinas, D.15
Pillai, D.R.16
Mitchell, T.J.17
Dougan, G.18
Tomasz, A.19
Klugman, K.P.20
Parkhill, J.21
Hanage, W.P.22
Bentley, S.D.23
more..
-
8
-
-
84878735463
-
Population genomics of post-vaccine changes in pneumococcal epidemiology
-
Croucher NJ, Finkelstein JA, Pelton SI, Mitchell PK, Lee GM, Parkhill J, Bentley SD, Hanage WP, Lipsitch M. 2013. Population genomics of post-vaccine changes in pneumococcal epidemiology. Nat. Genet. 45: 656-663. http://dx.doi.org/10.1038/ng.2625.
-
(2013)
Nat. Genet
, vol.45
, pp. 656-663
-
-
Croucher, N.J.1
Finkelstein, J.A.2
Pelton, S.I.3
Mitchell, P.K.4
Lee, G.M.5
Parkhill, J.6
Bentley, S.D.7
Hanage, W.P.8
Lipsitch, M.9
-
9
-
-
11144327172
-
Meningococcal polysaccharide-protein conjugate vaccines
-
Snape MD, Pollard AJ. 2005. Meningococcal polysaccharide-protein conjugate vaccines. Lancet Infect. Dis. 5:21-30. http://dx.doi.org/10.1016/S1473-3099(04)01251-4.
-
(2005)
Lancet Infect. Dis
, vol.5
, pp. 21-30
-
-
Snape, M.D.1
Pollard, A.J.2
-
10
-
-
84869013160
-
Capsular switching in group B streptococcus CC17 hypervirulent clone: A future challenge for polysaccharide vaccine development
-
Bellais S, Six A, Fouet A, Longo M, Dmytruk N, Glaser P, Trieu-Cuot P, Poyart C. 2012. Capsular switching in group B streptococcus CC17 hypervirulent clone: a future challenge for polysaccharide vaccine development. J. Infect. Dis. 206:1745-1752. http://dx.doi.org/10.1093/infdis/jis605.
-
(2012)
J. Infect. Dis
, vol.206
, pp. 1745-1752
-
-
Bellais, S.1
Six, A.2
Fouet, A.3
Longo, M.4
Dmytruk, N.5
Glaser, P.6
Trieu-Cuot, P.7
Poyart, C.8
-
11
-
-
70349304423
-
Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae
-
Chun J, Grim CJ, Hasan NA, Lee JH, Choi SY, Haley BJ, Taviani E, Jeon YS, Kim DW, Lee JH, Brettin TS, Bruce DC, Challacombe JF, Detter JC, Han CS, Munk AC, Chertkov O, Meincke L, Saunders E, Walters RA, Huq A, Nair GB, Colwell RR. 2009. Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae. Proc. Natl. Acad. Sci. U. S. A. 106:15442-15447. http://dx.doi.org/10.1073/pnas.0907787106.
-
(2009)
Proc. Natl. Acad. Sci. U. S. A
, vol.106
, pp. 15442-15447
-
-
Chun, J.1
Grim, C.J.2
Hasan, N.A.3
Lee, J.H.4
Choi, S.Y.5
Haley, B.J.6
Taviani, E.7
Jeon, Y.S.8
Kim, D.W.9
Lee, J.H.10
Brettin, T.S.11
Bruce, D.C.12
Challacombe, J.F.13
Detter, J.C.14
Han, C.S.15
Munk, A.C.16
Chertkov, O.17
Meincke, L.18
Saunders, E.19
Walters, R.A.20
Huq, A.21
Nair, G.B.22
Colwell, R.R.23
more..
-
12
-
-
84876072545
-
Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing
-
Dingle KE, Didelot X, Ansari MA, Eyre DW, Vaughan A, Griffiths D, Ip CLC, Batty EM, Golubchik T, Bowden R, Jolley KA, Hood DW, Fawley WN, Walker AS, Peto TE, Wilcox MH, Crook DW. 2013. Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing. J. Infect. Dis. 207:675-686. http://dx.doi.org/10.1093/infdis/jis734.
-
(2013)
J. Infect. Dis
, vol.207
, pp. 675-686
-
-
Dingle, K.E.1
Didelot, X.2
Ansari, M.A.3
Eyre, D.W.4
Vaughan, A.5
Griffiths, D.6
Ip, C.L.C.7
Batty, E.M.8
Golubchik, T.9
Bowden, R.10
Jolley, K.A.11
Hood, D.W.12
Fawley, W.N.13
Walker, A.S.14
Peto, T.E.15
Wilcox, M.H.16
Crook, D.W.17
-
13
-
-
75149126472
-
Genome sequence of a recently emerged, highly transmissible, multi-antibiotic-and antiseptic-resistant variant of methicillin-resistant Staphylococcus aureus, sequence type 239 (TW)
-
Holden MT, Lindsay JA, Corton C, Quail MA, Cockfield JD, Pathak S, Batra R, Parkhill J, Bentley SD, Edgeworth JD. 2010. Genome sequence of a recently emerged, highly transmissible, multi-antibiotic-and antiseptic-resistant variant of methicillin-resistant Staphylococcus aureus, sequence type 239 (TW). J. Bacteriol. 192:888-892. http://dx.doi.org/10.1128/JB.01255-09.
-
(2010)
J. Bacteriol
, vol.192
, pp. 888-892
-
-
Holden, M.T.1
Lindsay, J.A.2
Corton, C.3
Quail, M.A.4
Cockfield, J.D.5
Pathak, S.6
Batra, R.7
Parkhill, J.8
Bentley, S.D.9
Edgeworth, J.D.10
-
14
-
-
33846032295
-
A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: Convergence or divergence by homologous recombination?
-
Didelot X, Achtman M, Parkhill J, Thomson NR, Falush D. 2007. A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: convergence or divergence by homologous recombination? Genome Res. 17:61-68. http://dx.doi.org/10.1101/gr.5512906.
-
(2007)
Genome Res
, vol.17
, pp. 61-68
-
-
Didelot, X.1
Achtman, M.2
Parkhill, J.3
Thomson, N.R.4
Falush, D.5
-
15
-
-
57349116172
-
Shaping a bacterial genome by large chromosomal replacements, the evolutionary history of Streptococcus agalactiae
-
Brochet M, Rusniok C, Couvé E, Dramsi S, Poyart C, Trieu-Cuot P, Kunst F, Glaser P. 2008. Shaping a bacterial genome by large chromosomal replacements, the evolutionary history of Streptococcus agalactiae. Proc. Natl. Acad. Sci. U. S. A. 105:15961-15966. http://dx.doi.org/10.1073/pnas.0803654105.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A
, vol.105
, pp. 15961-15966
-
-
Brochet, M.1
Rusniok, C.2
Couvé, E.3
Dramsi, S.4
Poyart, C.5
Trieu-Cuot, P.6
Kunst, F.7
Glaser, P.8
-
16
-
-
77952168929
-
Evolutionary dynamics of Clostridium difficile over short and long time scales
-
He M, Sebaihia M, Lawley TD, Stabler RA, Dawson LF, Martin MJ, Holt KE, Seth-Smith HM, Quail MA, Rance R, Brooks K, Churcher C, Harris D, Bentley SD, Burrows C, Clark L, Corton C, Murray V, Rose G, Thurston S, van Tonder A, Walker D, Wren BW, Dougan G, Parkhill J. 2010. Evolutionary dynamics of Clostridium difficile over short and long time scales. Proc. Natl. Acad. Sci. U. S. A. 107:7527-7532. http://dx.doi.org/10.1073/pnas.0914322107.
-
(2010)
Proc. Natl. Acad. Sci. U. S. A
, vol.107
, pp. 7527-7532
-
-
He, M.1
Sebaihia, M.2
Lawley, T.D.3
Stabler, R.A.4
Dawson, L.F.5
Martin, M.J.6
Holt, K.E.7
Seth-Smith, H.M.8
Quail, M.A.9
Rance, R.10
Brooks, K.11
Churcher, C.12
Harris, D.13
Bentley, S.D.14
Burrows, C.15
Clark, L.16
Corton, C.17
Murray, V.18
Rose, G.19
Thurston, S.20
Van Tonder, A.21
Walker, D.22
Wren, B.W.23
Dougan, G.24
Parkhill, J.25
more..
-
17
-
-
84857655371
-
Pneumococcal genome sequencing tracks a vaccine escape variant formed through a multi-fragment recombination event
-
Golubchik T, Brueggemann AB, Street T, Gertz RE, Jr, Spencer CC, Ho T, Giannoulatou E, Link-Gelles R, Harding RM, Beall B, Peto TE, Moore MR, Donnelly P, Crook DW, Bowden R. 2012. Pneumococcal genome sequencing tracks a vaccine escape variant formed through a multi-fragment recombination event. Nat. Genet. 44:352-355. http://dx.doi.org/10.1038/ng.1072.
-
(2012)
Nat. Genet
, vol.44
, pp. 352-355
-
-
Golubchik, T.1
Brueggemann, A.B.2
Street, T.3
Gertz, R.E.4
Spencer, C.C.5
Ho, T.6
Giannoulatou, E.7
Link-Gelles, R.8
Harding, R.M.9
Beall, B.10
Peto, T.E.11
Moore, M.R.12
Donnelly, P.13
Crook, D.W.14
Bowden, R.15
-
18
-
-
84901627197
-
Heterogeneity in the frequency and characteristics of homologous recombination in pneumococcal evolution
-
Mostowy R, Croucher NJ, Hanage WP, Harris SR, Bentley S, Fraser C. 2014. Heterogeneity in the frequency and characteristics of homologous recombination in pneumococcal evolution. PLoS Genet. 10:e1004300. http://dx.doi.org/10.1371/journal.pgen.1004300.
-
(2014)
PLoS Genet
, vol.10
, pp. e1004300
-
-
Mostowy, R.1
Croucher, N.J.2
Hanage, W.P.3
Harris, S.R.4
Bentley, S.5
Fraser, C.6
-
19
-
-
84869027021
-
The multidrugresistant PMEN1 pneumococcus is a paradigm for genetic success
-
Wyres KL, Lambertsen LM, Croucher NJ, McGee L, von Gottberg A, Liñares J, Jacobs MR, Kristinsson KG, Beall BW, Klugman KP, Parkhill J, Hakenbeck R, Bentley SD, Brueggemann AB. 2012. The multidrugresistant PMEN1 pneumococcus is a paradigm for genetic success. Genome Biol. 13:R103. http://dx.doi.org/10.1186/gb-2012-13-11-r103.
-
(2012)
Genome Biol
, vol.13
, pp. R103
-
-
Wyres, K.L.1
Lambertsen, L.M.2
Croucher, N.J.3
McGee, L.4
Von Gottberg, A.5
Liñares, J.6
Jacobs, M.R.7
Kristinsson, K.G.8
Beall, B.W.9
Klugman, K.P.10
Parkhill, J.11
Hakenbeck, R.12
Bentley, S.D.13
Brueggemann, A.B.14
-
20
-
-
0001735834
-
Some aspects of evolution
-
Goldschmidt R. 1933. Some aspects of evolution. Science 78:539-547. http://dx.doi.org/10.1126/science.78.2033.539.
-
(1933)
Science
, vol.78
, pp. 539-547
-
-
Goldschmidt, R.1
|