-
1
-
-
84867310470
-
The revised classification of eukaryotes
-
Adl, S.M., Simpson, A.G.B., Lane, C.E., Lukeš, J., Bass, D., Bowser, S.S., etal. (2012) The revised classification of eukaryotes. J Eukaryot Microbiol 59: 429-514.
-
(2012)
J Eukaryot Microbiol
, vol.59
, pp. 429-514
-
-
Adl, S.M.1
Simpson, A.G.B.2
Lane, C.E.3
Lukeš, J.4
Bass, D.5
Bowser, S.S.6
-
2
-
-
84879047636
-
A bacterial sulfonolipid triggers multicellular development in the closest living relatives of animals
-
Alegado, R.A., Brown, L.W., Cao, S., Dermenjian, R.K., Zuzow, R., Fairclough, S.R., etal. (2012) A bacterial sulfonolipid triggers multicellular development in the closest living relatives of animals. Elife 1: e00013.
-
(2012)
Elife
, vol.1
, pp. e00013
-
-
Alegado, R.A.1
Brown, L.W.2
Cao, S.3
Dermenjian, R.K.4
Zuzow, R.5
Fairclough, S.R.6
-
3
-
-
71849092503
-
Molecular approach to determine contributions of the protist community to particle flux
-
Amacher, J., Neuer, S., Anderson, I.J., and Massana, R. (2009) Molecular approach to determine contributions of the protist community to particle flux. Deep Sea Res Part I Oceanogr Res Pap 56: 2206-2215.
-
(2009)
Deep Sea Res Part I Oceanogr Res Pap
, vol.56
, pp. 2206-2215
-
-
Amacher, J.1
Neuer, S.2
Anderson, I.J.3
Massana, R.4
-
4
-
-
0001633476
-
Functional diversity of heterotrophic flagellates in aquatic ecosystems
-
Leadbeater, B.S.C., and Green, J.C. (eds). London, UK: CRC Press
-
Arndt, H., Dietrich, D., Auer, B., Cleven, E.J., Gräfenhan, T., Weitere, M., and Mylnikov, A.P. (2000) Functional diversity of heterotrophic flagellates in aquatic ecosystems. In The Flagellates: Unity, Diversity and Evolution. Leadbeater, B.S.C., and Green, J.C. (eds). London, UK: CRC Press, pp. 240-268.
-
(2000)
The Flagellates: Unity, Diversity and Evolution
, pp. 240-268
-
-
Arndt, H.1
Dietrich, D.2
Auer, B.3
Cleven, E.J.4
Gräfenhan, T.5
Weitere, M.6
Mylnikov, A.P.7
-
5
-
-
0032790577
-
Prototheca richardsi, a pathogen of anuran larvae, is related to a clade of protistan parasites near the animal-fungal divergence
-
Baker, G.C., Beebee, T.J., and Ragan, M.A. (1999) Prototheca richardsi, a pathogen of anuran larvae, is related to a clade of protistan parasites near the animal-fungal divergence. Microbiology 145: 1777-1784.
-
(1999)
Microbiology
, vol.145
, pp. 1777-1784
-
-
Baker, G.C.1
Beebee, T.J.2
Ragan, M.A.3
-
6
-
-
0027138675
-
Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins
-
Baldauf, S.L., and Palmer, J.D. (1993) Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins. Proc Natl Acad Sci 90: 11558-11562.
-
(1993)
Proc Natl Acad Sci
, vol.90
, pp. 11558-11562
-
-
Baldauf, S.L.1
Palmer, J.D.2
-
7
-
-
3242711100
-
How many novel eukaryotic 'kingdoms'? Pitfalls and limitations of environmental DNA surveys
-
Berney, C., Fahrni, J.F., and Pawlowski, J. (2004) How many novel eukaryotic 'kingdoms'? Pitfalls and limitations of environmental DNA surveys. BMC Biol 2: 13.
-
(2004)
BMC Biol
, vol.2
, pp. 13
-
-
Berney, C.1
Fahrni, J.F.2
Pawlowski, J.3
-
8
-
-
84857508990
-
Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments
-
Bik, H.M., Sung, W., De Ley, P., Baldwin, J.G., Sharma, J., Rocha-Olivares, A., and Thomas, W.K. (2012) Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments. Mol Ecol 21: 1048-1059.
-
(2012)
Mol Ecol
, vol.21
, pp. 1048-1059
-
-
Bik, H.M.1
Sung, W.2
De Ley, P.3
Baldwin, J.G.4
Sharma, J.5
Rocha-Olivares, A.6
Thomas, W.K.7
-
9
-
-
84872840566
-
Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay
-
Bittner, L., Gobet, A., Audic, S., Romac, S., Egge, E.S., Santini, S., etal. (2013) Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay. Mol Ecol 22: 87-101.
-
(2013)
Mol Ecol
, vol.22
, pp. 87-101
-
-
Bittner, L.1
Gobet, A.2
Audic, S.3
Romac, S.4
Egge, E.S.5
Santini, S.6
-
10
-
-
84901000558
-
Environmental DNA for wildlife biology and biodiversity monitoring
-
Bohmann, K., Evans, A., Gilbert, M.T., Carvalho, G.R., Creer, S., Knapp, M., etal. (2014) Environmental DNA for wildlife biology and biodiversity monitoring. Trends Ecol Evol 29: 358-367.
-
(2014)
Trends Ecol Evol
, vol.29
, pp. 358-367
-
-
Bohmann, K.1
Evans, A.2
Gilbert, M.T.3
Carvalho, G.R.4
Creer, S.5
Knapp, M.6
-
11
-
-
70450242802
-
Phylogeny of the 'forgotten' cellular slime mold, Fonticula alba, reveals a key evolutionary branch within Opisthokonta
-
Brown, M.W., Spiegel, F.W., and Silberman, J.D. (2009) Phylogeny of the 'forgotten' cellular slime mold, Fonticula alba, reveals a key evolutionary branch within Opisthokonta. Mol Biol Evol 26: 2699-2709.
-
(2009)
Mol Biol Evol
, vol.26
, pp. 2699-2709
-
-
Brown, M.W.1
Spiegel, F.W.2
Silberman, J.D.3
-
12
-
-
79958011072
-
Emerging diversity within chrysophytes, choanoflagellates and bicosoecids based on molecular surveys
-
del Campo, J., and Massana, R. (2011) Emerging diversity within chrysophytes, choanoflagellates and bicosoecids based on molecular surveys. Protist 162: 435-448.
-
(2011)
Protist
, vol.162
, pp. 435-448
-
-
del Campo, J.1
Massana, R.2
-
13
-
-
84875609542
-
Environmental survey meta-analysis reveals hidden diversity among unicellular opisthokonts
-
del Campo, J., and Ruiz-Trillo, I. (2013) Environmental survey meta-analysis reveals hidden diversity among unicellular opisthokonts. Mol Biol Evol 30: 802-805.
-
(2013)
Mol Biol Evol
, vol.30
, pp. 802-805
-
-
del Campo, J.1
Ruiz-Trillo, I.2
-
14
-
-
84884411804
-
Culturing bias in marine heterotrophic flagellates analyzed through seawater enrichment incubations
-
del Campo, J., Balagué, V., Forn, I., Lekunberri, I., and Massana, R. (2013) Culturing bias in marine heterotrophic flagellates analyzed through seawater enrichment incubations. Microb Ecol 66: 489-499.
-
(2013)
Microb Ecol
, vol.66
, pp. 489-499
-
-
del Campo, J.1
Balagué, V.2
Forn, I.3
Lekunberri, I.4
Massana, R.5
-
15
-
-
84872980144
-
Taming the smallest predators of the oceans
-
del Campo, J., Not, F., Forn, I., Sieracki, M.E., and Massana, R. (2013) Taming the smallest predators of the oceans. ISME J 7: 351-358.
-
(2013)
ISME J
, vol.7
, pp. 351-358
-
-
del Campo, J.1
Not, F.2
Forn, I.3
Sieracki, M.E.4
Massana, R.5
-
16
-
-
84899491694
-
The others: our biased perspective of eukaryotic genomes
-
del Campo, J., Sieracki, M.E., Molestina, R.E., Keeling, P.J., Massana, R., and Ruiz-Trillo, I. (2014) The others: our biased perspective of eukaryotic genomes. Trends Ecol Evol 29: 252-259.
-
(2014)
Trends Ecol Evol
, vol.29
, pp. 252-259
-
-
del Campo, J.1
Sieracki, M.E.2
Molestina, R.E.3
Keeling, P.J.4
Massana, R.5
Ruiz-Trillo, I.6
-
17
-
-
67650757433
-
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
-
Capella-Gutiérrez, S., Silla-Martínez, J.M., and Gabaldón, T. (2009) trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25: 1972-1973.
-
(2009)
Bioinformatics
, vol.25
, pp. 1972-1973
-
-
Capella-Gutiérrez, S.1
Silla-Martínez, J.M.2
Gabaldón, T.3
-
18
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso, J.G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F.D., Costello, E.K., etal. (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7: 335-336.
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
-
19
-
-
55949117660
-
Molecular phylogeny of choanoflagellates, the sister group to Metazoa
-
Carr, M., Leadbeater, B.S.C., Hassan, R., Nelson, M., and Baldauf, S.L. (2008) Molecular phylogeny of choanoflagellates, the sister group to Metazoa. Proc Natl Acad Sci 105: 16641-16646.
-
(2008)
Proc Natl Acad Sci
, vol.105
, pp. 16641-16646
-
-
Carr, M.1
Leadbeater, B.S.C.2
Hassan, R.3
Nelson, M.4
Baldauf, S.L.5
-
20
-
-
0001875826
-
The origin of fungi and pseudofungi
-
Rayner, A.D.M., Brasier, C.M., and Moore, D. (eds). Cambridge, UK: Cambridge University Press
-
Cavalier-Smith, T. (1987) The origin of fungi and pseudofungi. In Evolutionary Biology of the Fungi. Rayner, A.D.M., Brasier, C.M., and Moore, D. (eds). Cambridge, UK: Cambridge University Press, pp. 339-353.
-
(1987)
Evolutionary Biology of the Fungi
, pp. 339-353
-
-
Cavalier-Smith, T.1
-
21
-
-
0037403365
-
Phylogeny of choanozoa, apusozoa, and other protozoa and early eukaryote megaevolution
-
Cavalier-Smith, T., and Chao, E.E.-Y. (2003) Phylogeny of choanozoa, apusozoa, and other protozoa and early eukaryote megaevolution. J Mol Evol 56: 540-563.
-
(2003)
J Mol Evol
, vol.56
, pp. 540-563
-
-
Cavalier-Smith, T.1
Chao, E.-Y.2
-
22
-
-
84901983977
-
Diverse molecular signatures for ribosomally 'active' Perkinsea in marine sediments
-
Chambouvet, A., Berney, C., Romac, S., Audic, S., Maguire, F., De Vargas, C., and Richards, T.A. (2014) Diverse molecular signatures for ribosomally 'active' Perkinsea in marine sediments. BMC Microbiol 14: 110.
-
(2014)
BMC Microbiol
, vol.14
, pp. 110
-
-
Chambouvet, A.1
Berney, C.2
Romac, S.3
Audic, S.4
Maguire, F.5
De Vargas, C.6
Richards, T.A.7
-
23
-
-
59049093492
-
Genetic diversity of picoeukaryotes in a semi-enclosed harbour in the subtropical western Pacific Ocean
-
Cheung, M.K., Chu, K.H., Li, C.P., Kwan, H.S., and Wong, C.K. (2008) Genetic diversity of picoeukaryotes in a semi-enclosed harbour in the subtropical western Pacific Ocean. Aquat Microb Ecol 53: 295-305.
-
(2008)
Aquat Microb Ecol
, vol.53
, pp. 295-305
-
-
Cheung, M.K.1
Chu, K.H.2
Li, C.P.3
Kwan, H.S.4
Wong, C.K.5
-
24
-
-
0028581798
-
A comparison of the growth kinetics of six marine heterotrophic nanoflagellates fed with one bacterial species
-
Eccleston-Parry, J.D., and Leadbeater, B.S.C. (1994) A comparison of the growth kinetics of six marine heterotrophic nanoflagellates fed with one bacterial species. Mar Ecol Prog Ser 105: 167-177.
-
(1994)
Mar Ecol Prog Ser
, vol.105
, pp. 167-177
-
-
Eccleston-Parry, J.D.1
Leadbeater, B.S.C.2
-
25
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar, R.C. (2010) Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26: 2460-2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
26
-
-
79960560895
-
Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness
-
Edgcomb, V., Orsi, W., Bunge, J.A., Jeon, S., Christen, R., Leslin, C., etal. (2011) Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness. ISME J 5: 1344-1356.
-
(2011)
ISME J
, vol.5
, pp. 1344-1356
-
-
Edgcomb, V.1
Orsi, W.2
Bunge, J.A.3
Jeon, S.4
Christen, R.5
Leslin, C.6
-
27
-
-
78049248503
-
Multicellular development in a choanoflagellate
-
Fairclough, S.R., Dayel, M.J., and King, N. (2010) Multicellular development in a choanoflagellate. Curr Biol 20: R875-R876.
-
(2010)
Curr Biol
, vol.20
, pp. R875-R876
-
-
Fairclough, S.R.1
Dayel, M.J.2
King, N.3
-
28
-
-
0000048745
-
Ecology of heterotrophic microflagellates. I. Some important forms and their functional morphology
-
Fenchel, T. (1982) Ecology of heterotrophic microflagellates. I. Some important forms and their functional morphology. Mar Ecol Prog Ser 9: 211-223.
-
(1982)
Mar Ecol Prog Ser
, vol.9
, pp. 211-223
-
-
Fenchel, T.1
-
29
-
-
84880321899
-
Second-generation environmental sequencing unmasks marine metazoan biodiversity
-
Fonseca, V.G., Carvalho, G.R., Sung, W., Johnson, H.F., Power, D.M., Neill, S.P., etal. (2010) Second-generation environmental sequencing unmasks marine metazoan biodiversity. Nat Commun 1: 98.
-
(2010)
Nat Commun
, vol.1
, pp. 98
-
-
Fonseca, V.G.1
Carvalho, G.R.2
Sung, W.3
Johnson, H.F.4
Power, D.M.5
Neill, S.P.6
-
30
-
-
84878801441
-
Phylogenetic interpretations and ecological potentials of the Mesomycetozoea (Ichthyosporea)
-
Glockling, S.L., Marshall, W.L., and Gleason, F.H. (2013) Phylogenetic interpretations and ecological potentials of the Mesomycetozoea (Ichthyosporea). Fungal Ecol. 6: 237-247.
-
(2013)
Fungal Ecol.
, vol.6
, pp. 237-247
-
-
Glockling, S.L.1
Marshall, W.L.2
Gleason, F.H.3
-
31
-
-
74549125386
-
SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building
-
Gouy, M., Guindon, S., and Gascuel, O. (2010) SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 27: 221-224.
-
(2010)
Mol Biol Evol
, vol.27
, pp. 221-224
-
-
Gouy, M.1
Guindon, S.2
Gascuel, O.3
-
32
-
-
84897645813
-
Current ecological understanding of fungal-like pathogens of fish: what lies beneath?
-
Gozlan, R.E., Marshall, W.L., Lilje, O., Jessop, C.N., Gleason, F.H., and Andreou, D. (2014) Current ecological understanding of fungal-like pathogens of fish: what lies beneath?. Front Microbiol 5: 1-16.
-
(2014)
Front Microbiol
, vol.5
, pp. 1-16
-
-
Gozlan, R.E.1
Marshall, W.L.2
Lilje, O.3
Jessop, C.N.4
Gleason, F.H.5
Andreou, D.6
-
33
-
-
84875623291
-
The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy
-
Guillou, L., Bachar, D., Audic, S., Bass, D., Berney, C., Bittner, L., etal. (2013) The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy. Nucleic Acids Res 41: D597-D604.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D597-D604
-
-
Guillou, L.1
Bachar, D.2
Audic, S.3
Bass, D.4
Berney, C.5
Bittner, L.6
-
34
-
-
84895735742
-
Characterization of the 18S rRNA gene for designing universal eukaryote specific primers
-
Hadziavdic, K., Lekang, K., Lanzen, A., Jonassen, I., Thompson, E.M., and Troedsson, C. (2014) Characterization of the 18S rRNA gene for designing universal eukaryote specific primers. PLoS ONE 9: e87624.
-
(2014)
PLoS ONE
, vol.9
, pp. e87624
-
-
Hadziavdic, K.1
Lekang, K.2
Lanzen, A.3
Jonassen, I.4
Thompson, E.M.5
Troedsson, C.6
-
35
-
-
84921692760
-
Extended phylogeny of the Craspedida (Choanomonada)
-
Jeuck, A., Arndt, H., and Nitsche, F. (2014) Extended phylogeny of the Craspedida (Choanomonada). Eur J Protistol 50: 430-443.
-
(2014)
Eur J Protistol
, vol.50
, pp. 430-443
-
-
Jeuck, A.1
Arndt, H.2
Nitsche, F.3
-
36
-
-
0037100671
-
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh, K., Misawa, K., Kuma, K., and Miyata, T. (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res 30: 3059-3066.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
37
-
-
18244378809
-
Choanoflagellates
-
King, N. (2005) Choanoflagellates. Curr Biol 15: 113-114.
-
(2005)
Curr Biol
, vol.15
, pp. 113-114
-
-
King, N.1
-
38
-
-
58149242617
-
Three-dimensional images of choanoflagellate loricae
-
Leadbeater, B.S.C., Yu, Q., Kent, J., and Stekel, D.J. (2009) Three-dimensional images of choanoflagellate loricae. Proc R Soc B Biol Sci 276: 3-11.
-
(2009)
Proc R Soc B Biol Sci
, vol.276
, pp. 3-11
-
-
Leadbeater, B.S.C.1
Yu, Q.2
Kent, J.3
Stekel, D.J.4
-
39
-
-
0036954513
-
Abundance and biomass of choanoflagellates and other nanoflagellates in waters of contrasting temperature to the north-west of South Georgia in the Southern Ocean
-
Leakey, R.J.G., Leadbeater, B.S.C., Mitchell, E., McCready, S.M.M., and Murray, A.W.A. (2002) Abundance and biomass of choanoflagellates and other nanoflagellates in waters of contrasting temperature to the north-west of South Georgia in the Southern Ocean. Eur J Protistol 38: 333-350.
-
(2002)
Eur J Protistol
, vol.38
, pp. 333-350
-
-
Leakey, R.J.G.1
Leadbeater, B.S.C.2
Mitchell, E.3
McCready, S.M.M.4
Murray, A.W.A.5
-
40
-
-
79960004119
-
Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy
-
Letunic, I., and Bork, P. (2011) Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy. Nucleic Acids Res 39: W475-W478.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. W475-W478
-
-
Letunic, I.1
Bork, P.2
-
41
-
-
85027927620
-
Evidence for sex and recombination in the choanoflagellate Salpingoeca rosetta
-
Levin, T.C., and King, N. (2013) Evidence for sex and recombination in the choanoflagellate Salpingoeca rosetta. Curr Biol 23: 2176-2180.
-
(2013)
Curr Biol
, vol.23
, pp. 2176-2180
-
-
Levin, T.C.1
King, N.2
-
42
-
-
72249109366
-
Phylogenomic analyses predict sister group relationship of nucleariids and fungi and paraphyly of zygomycetes with significant support
-
Liu, Y., Steenkamp, E.T., Brinkmann, H., Forget, L., Philippe, H., and Lang, B.F. (2009) Phylogenomic analyses predict sister group relationship of nucleariids and fungi and paraphyly of zygomycetes with significant support. BMC Evol Biol 9: 272.
-
(2009)
BMC Evol Biol
, vol.9
, pp. 272
-
-
Liu, Y.1
Steenkamp, E.T.2
Brinkmann, H.3
Forget, L.4
Philippe, H.5
Lang, B.F.6
-
43
-
-
84867740787
-
Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing
-
Logares, R., Audic, S., Santini, S., Pernice, M.C., de Vargas, C., and Massana, R. (2012) Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing. ISME J 6: 1823-1833.
-
(2012)
ISME J
, vol.6
, pp. 1823-1833
-
-
Logares, R.1
Audic, S.2
Santini, S.3
Pernice, M.C.4
de Vargas, C.5
Massana, R.6
-
44
-
-
84868270724
-
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome
-
McDonald, D., Clemente, J.C., Kuczynski, J., Rideout, J.R., Stombaugh, J., Wendel, D., etal. (2012) The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome. Gigascience 1: 7.
-
(2012)
Gigascience
, vol.1
, pp. 7
-
-
McDonald, D.1
Clemente, J.C.2
Kuczynski, J.3
Rideout, J.R.4
Stombaugh, J.5
Wendel, D.6
-
45
-
-
84874479799
-
Animals in a bacterial world, a new imperative for the life sciences
-
McFall-Ngai, M., Hadfield, M.G., Bosch, T.C.G., Carey, H.V., Domazet-Lošo, T., Douglas, A.E., etal. (2013) Animals in a bacterial world, a new imperative for the life sciences. Proc Natl Acad Sci 110: 3229-3936.
-
(2013)
Proc Natl Acad Sci
, vol.110
, pp. 3229-3936
-
-
McFall-Ngai, M.1
Hadfield, M.G.2
Bosch, T.C.G.3
Carey, H.V.4
Domazet-Lošo, T.5
Douglas, A.E.6
-
46
-
-
78650417950
-
Facing unknowns: living cultures (Pirum gemmata gen. nov., sp. nov., and Abeoforma whisleri, gen. nov., sp. nov.) from Invertebrate Digestive Tracts Represent an Undescribed Clade within the Unicellular Opisthokont Lineage Ichthyosporea (Mesomycetozoea)
-
Marshall, W.L., and Berbee, M.L. (2010) Facing unknowns: living cultures (Pirum gemmata gen. nov., sp. nov., and Abeoforma whisleri, gen. nov., sp. nov.) from Invertebrate Digestive Tracts Represent an Undescribed Clade within the Unicellular Opisthokont Lineage Ichthyosporea (Mesomycetozoea). Protist 162: 33-57.
-
(2010)
Protist
, vol.162
, pp. 33-57
-
-
Marshall, W.L.1
Berbee, M.L.2
-
47
-
-
45549109136
-
Multiple isolations of a culturable, motile Ichthyosporean (Mesomycetozoa, Opisthokonta), Creolimax fragrantissima n. gen., n. sp., from marine invertebrate digestive tracts
-
Marshall, W.L., Celio, G., McLaughlin, D.J., and Berbee, M.L. (2008) Multiple isolations of a culturable, motile Ichthyosporean (Mesomycetozoa, Opisthokonta), Creolimax fragrantissima n. gen., n. sp., from marine invertebrate digestive tracts. Protist 159: 415-433.
-
(2008)
Protist
, vol.159
, pp. 415-433
-
-
Marshall, W.L.1
Celio, G.2
McLaughlin, D.J.3
Berbee, M.L.4
-
48
-
-
80053289210
-
Eukaryotic picoplankton in surface oceans
-
Massana, R. (2011) Eukaryotic picoplankton in surface oceans. Annu Rev Microbiol 65: 91-110.
-
(2011)
Annu Rev Microbiol
, vol.65
, pp. 91-110
-
-
Massana, R.1
-
49
-
-
33845899987
-
Growth of uncultured heterotrophic flagellates in unamended seawater incubations
-
Massana, R., Guillou, L., Terrado, R., Forn, I., and Pedrós-Alió, C. (2006) Growth of uncultured heterotrophic flagellates in unamended seawater incubations. Aquat Microb Ecol 45: 171-180.
-
(2006)
Aquat Microb Ecol
, vol.45
, pp. 171-180
-
-
Massana, R.1
Guillou, L.2
Terrado, R.3
Forn, I.4
Pedrós-Alió, C.5
-
50
-
-
84899407728
-
Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles
-
Massana, R., del Campo, J., Sieracki, M.E., Audic, S., and Logares, R. (2014) Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles. ISME J 8: 854-866.
-
(2014)
ISME J
, vol.8
, pp. 854-866
-
-
Massana, R.1
del Campo, J.2
Sieracki, M.E.3
Audic, S.4
Logares, R.5
-
51
-
-
0036407336
-
The class mesomycetozoea: a heterogeneous group of microorganisms at the animal-fungal boundary
-
Mendoza, L., Taylor, J.W., and Ajello, L. (2002) The class mesomycetozoea: a heterogeneous group of microorganisms at the animal-fungal boundary. Annu Rev Microbiol 56: 315-344.
-
(2002)
Annu Rev Microbiol
, vol.56
, pp. 315-344
-
-
Mendoza, L.1
Taylor, J.W.2
Ajello, L.3
-
52
-
-
53349168564
-
Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes
-
Not, F., Latasa, M., Sucharek, R., Viprey, M., Karleskind, P., Balagué, V., etal. (2008) Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes. Deep Sea Res Part I Oceanogr Res Pap 55: 1456-1473.
-
(2008)
Deep Sea Res Part I Oceanogr Res Pap
, vol.55
, pp. 1456-1473
-
-
Not, F.1
Latasa, M.2
Sucharek, R.3
Viprey, M.4
Karleskind, P.5
Balagué, V.6
-
53
-
-
70349638531
-
New insights into the diversity of marine picoeukaryotes
-
Not, F., del Campo, J., Balagué, V., De Vargas, C., and Massana, R. (2009) New insights into the diversity of marine picoeukaryotes. PLoS ONE 4: 7.
-
(2009)
PLoS ONE
, vol.4
, pp. 7
-
-
Not, F.1
del Campo, J.2
Balagué, V.3
De Vargas, C.4
Massana, R.5
-
55
-
-
84872267078
-
Molecular phylogeny of unikonts: new insights into the position of apusomonads and ancyromonads and the internal relationships of opisthokonts
-
Paps, J., Medina-Chacón, L.A., Marshall, W.L., Suga, H., and Ruiz-Trillo, I. (2013) Molecular phylogeny of unikonts: new insights into the position of apusomonads and ancyromonads and the internal relationships of opisthokonts. Protist 164: 2-12.
-
(2013)
Protist
, vol.164
, pp. 2-12
-
-
Paps, J.1
Medina-Chacón, L.A.2
Marshall, W.L.3
Suga, H.4
Ruiz-Trillo, I.5
-
56
-
-
33744745905
-
Marine microbial diversity: can it be determined?
-
Pedrós-Alió, C. (2006) Marine microbial diversity: can it be determined? Trends Microbiol 14: 257-263.
-
(2006)
Trends Microbiol
, vol.14
, pp. 257-263
-
-
Pedrós-Alió, C.1
-
57
-
-
84874311437
-
General patterns of diversity in major marine microeukaryote lineages
-
Pernice, M.C., Logares, R., Guillou, L., and Massana, R. (2013) General patterns of diversity in major marine microeukaryote lineages. PLoS ONE 8: e57170.
-
(2013)
PLoS ONE
, vol.8
, pp. e57170
-
-
Pernice, M.C.1
Logares, R.2
Guillou, L.3
Massana, R.4
-
58
-
-
0029954973
-
A novel clade of protistan parasites near the animal-fungal divergence
-
Ragan, M.A., Goggin, C.L., Cawthorn, R.J., Cerenius, L., Jamieson, A., V, Plourde, S.M., etal. (1996) A novel clade of protistan parasites near the animal-fungal divergence. Proc Natl Acad Sci 93: 11907-11912.
-
(1996)
Proc Natl Acad Sci
, vol.93
, pp. 11907-11912
-
-
Ragan, M.A.1
Goggin, C.L.2
Cawthorn, R.J.3
Cerenius, L.4
Jamieson, V.A.5
Plourde, S.M.6
-
59
-
-
84942492993
-
Occurrence of the traustochytrid Corallochytrium limacisporum gen. et sp. nov. in the coral reef lagoons of the Lakshadweep Islands in the Arabian Sea
-
Raghukumar, S. (1987) Occurrence of the traustochytrid Corallochytrium limacisporum gen. et sp. nov. in the coral reef lagoons of the Lakshadweep Islands in the Arabian Sea. Bot Mar 30: 83-89.
-
(1987)
Bot Mar
, vol.30
, pp. 83-89
-
-
Raghukumar, S.1
-
60
-
-
82455209220
-
Marine fungi: their ecology and molecular diversity
-
Richards, T.A., Jones, M.D.M., Leonard, G., and Bass, D. (2012) Marine fungi: their ecology and molecular diversity. Ann Rev Mar Sci 4: 495-522.
-
(2012)
Ann Rev Mar Sci
, vol.4
, pp. 495-522
-
-
Richards, T.A.1
Jones, M.D.M.2
Leonard, G.3
Bass, D.4
-
61
-
-
2942562373
-
Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences
-
Romari, K., and Vaulot, D. (2004) Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences. Limnol Oceanogr 49: 784-798.
-
(2004)
Limnol Oceanogr
, vol.49
, pp. 784-798
-
-
Romari, K.1
Vaulot, D.2
-
62
-
-
9244242090
-
Capsaspora owczarzaki is an independent opisthokont lineage
-
Ruiz-Trillo, I., Inagaki, Y., Davis, L.L.A., Landfald, B., Roger, A.J., and Sperstad, S. (2004) Capsaspora owczarzaki is an independent opisthokont lineage. Curr Biol 14: R946-R947.
-
(2004)
Curr Biol
, vol.14
, pp. R946-R947
-
-
Ruiz-Trillo, I.1
Inagaki, Y.2
Davis, L.L.A.3
Landfald, B.4
Roger, A.J.5
Sperstad, S.6
-
63
-
-
40849104855
-
A phylogenomic investigation into the origin of metazoa
-
Ruiz-Trillo, I., Roger, A.J., Burger, G., Gray, M.W., and Lang, B.F. (2008) A phylogenomic investigation into the origin of metazoa. Mol Biol Evol 25: 664-672.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 664-672
-
-
Ruiz-Trillo, I.1
Roger, A.J.2
Burger, G.3
Gray, M.W.4
Lang, B.F.5
-
64
-
-
84891553972
-
Regulated aggregative multicellularity in a close unicellular relative of metazoa
-
Sebé-Pedrós, A., Irimia, M., del Campo, J., Parra-Acero, H., Russ, C., Nusbaum, C., etal. (2013) Regulated aggregative multicellularity in a close unicellular relative of metazoa. Elife 2: e01287.
-
(2013)
Elife
, vol.2
, pp. e01287
-
-
Sebé-Pedrós, A.1
Irimia, M.2
del Campo, J.3
Parra-Acero, H.4
Russ, C.5
Nusbaum, C.6
-
65
-
-
47749123501
-
Multigene phylogeny of choanozoa and the origin of animals
-
Shalchian-Tabrizi, K., Minge, M.A., Espelund, M., Orr, R.J.S., Ruden, T., Jakobsen, K.S., and Cavalier-Smith, T. (2008) Multigene phylogeny of choanozoa and the origin of animals. PLoS ONE 3: 2098.
-
(2008)
PLoS ONE
, vol.3
, pp. 2098
-
-
Shalchian-Tabrizi, K.1
Minge, M.A.2
Espelund, M.3
Orr, R.J.S.4
Ruden, T.5
Jakobsen, K.S.6
Cavalier-Smith, T.7
-
66
-
-
33750403801
-
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
67
-
-
28944452833
-
The protistan origins of animals and fungi
-
Steenkamp, E.T., Wright, J., and Baldauf, S.L. (2006) The protistan origins of animals and fungi. Mol Biol Evol 23: 93-106.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 93-106
-
-
Steenkamp, E.T.1
Wright, J.2
Baldauf, S.L.3
-
68
-
-
77951908579
-
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
-
Stoeck, T., Bass, D., Nebel, M., Christen, R., Jones, M.D.M., Breiner, H.-W., and Richards, T.A. (2010) Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water. Mol Ecol 19: 21-31.
-
(2010)
Mol Ecol
, vol.19
, pp. 21-31
-
-
Stoeck, T.1
Bass, D.2
Nebel, M.3
Christen, R.4
Jones, M.D.M.5
Breiner, H.-W.6
Richards, T.A.7
-
69
-
-
84876321359
-
Development of ichthyosporeans sheds light on the origin of metazoan multicellularity
-
Suga, H., and Ruiz-Trillo, I. (2013) Development of ichthyosporeans sheds light on the origin of metazoan multicellularity. Dev Biol 377: 284-292.
-
(2013)
Dev Biol
, vol.377
, pp. 284-292
-
-
Suga, H.1
Ruiz-Trillo, I.2
-
70
-
-
0031445038
-
Heterotrophic flagellates and other protists from Southampton Water, U.K
-
Tong, S.M. (1997a) Heterotrophic flagellates and other protists from Southampton Water, U.K. Ophelia 47: 71-131.
-
(1997)
Ophelia
, vol.47
, pp. 71-131
-
-
Tong, S.M.1
-
71
-
-
0030609586
-
Heterotrophic flagellates from the water column in Shark Bay, Western Australia
-
Tong, S.M. (1997b) Heterotrophic flagellates from the water column in Shark Bay, Western Australia. Mar Biol 128: 517-536.
-
(1997)
Mar Biol
, vol.128
, pp. 517-536
-
-
Tong, S.M.1
-
72
-
-
84855881484
-
Phylogenetic relationships within the Opisthokonta based on phylogenomic analyses of conserved single copy protein domains
-
Torruella, G., Derelle, R., Paps, J., Lang, B.F., Roger, A.J., Shalchian-Tabrizi, K., and Ruiz-Trillo, I. (2012) Phylogenetic relationships within the Opisthokonta based on phylogenomic analyses of conserved single copy protein domains. Mol Biol Evol 29: 531-544.
-
(2012)
Mol Biol Evol
, vol.29
, pp. 531-544
-
-
Torruella, G.1
Derelle, R.2
Paps, J.3
Lang, B.F.4
Roger, A.J.5
Shalchian-Tabrizi, K.6
Ruiz-Trillo, I.7
-
74
-
-
84891813947
-
The SILVA and 'All-species Living Tree Project (LTP)' taxonomic frameworks
-
Yilmaz, P., Parfrey, L.W., Yarza, P., Gerken, J., Pruesse, E., Quast, C., etal. (2014) The SILVA and 'All-species Living Tree Project (LTP)' taxonomic frameworks. Nucleic Acids Res 42: D643-D648.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D643-D648
-
-
Yilmaz, P.1
Parfrey, L.W.2
Yarza, P.3
Gerken, J.4
Pruesse, E.5
Quast, C.6
|