Extracting representative structures from protein conformational ensembles

Proteins: Structure, Function and Bioinformatics

Volumn 82, Issue 10, 2014, Pages 2671-2680

  Perez, Alberto ^a   Roy, Arijit ^a   Kasavajhala, Koushik ^a   Wagaman, Amy ^b   Dill, Ken A ^a   Maccallum, Justin L ^a,c  

^a STONY BROOK UNIVERSITY   (United States)

^b AMHERST COLLEGE   (United States)

^c UNIVERSITY OF CALGARY   (Canada)

Author keywords

Averaging; CASP; Clustering; Ensembles; Molecular dynamics; Protein; Root mean square deviation

Indexed keywords

PROTEIN; MULTIPROTEIN COMPLEX;

ARTICLE; CONFORMATIONAL TRANSITION; CRYSTAL STRUCTURE; ENTROPY; MOLECULAR DYNAMICS; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN SECONDARY STRUCTURE; PROTEIN STRUCTURE; SOLID STATE; SYSTEMATIC ERROR; X RAY CRYSTALLOGRAPHY; ANIMAL; CHEMICAL STRUCTURE; CHEMISTRY; CLUSTER ANALYSIS; COMPARATIVE STUDY; COMPUTER PROGRAM; ENERGY TRANSFER; HUMAN; INTERNET; METABOLISM; NONLINEAR SYSTEM; NORMAL DISTRIBUTION; PROTEIN DATABASE; PROTEIN DOMAIN; PROTEIN MULTIMERIZATION; REPRODUCIBILITY; STATISTICS;

ANIMALS; CLUSTER ANALYSIS; CRYSTALLOGRAPHY, X-RAY; DATABASES, PROTEIN; ENERGY TRANSFER; ENTROPY; HUMANS; INTERNET; MODELS, MOLECULAR; MOLECULAR DYNAMICS SIMULATION; MULTIPROTEIN COMPLEXES; NONLINEAR DYNAMICS; NORMAL DISTRIBUTION; PROTEIN CONFORMATION; PROTEIN INTERACTION DOMAINS AND MOTIFS; PROTEIN MULTIMERIZATION; PROTEINS; REPRODUCIBILITY OF RESULTS; SOFTWARE; STATISTICS AS TOPIC;

EID: 84940214914     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.24633     Document Type: Article

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