-
1
-
-
80053927283
-
A CCD-based fluorescence imaging system for real-time loop-mediated isothermal amplification-based rapid and sensitive detection of waterborne pathogens on microchips
-
COI: 1:CAS:528:DC%2BC3MXhtFeksLzL, PID: 21720851
-
Ahmad F, Seyrig G, Tourlousse DM, Stedtfeld RD, Tiedje JM, Hashsham SA (2011) A CCD-based fluorescence imaging system for real-time loop-mediated isothermal amplification-based rapid and sensitive detection of waterborne pathogens on microchips. Biomed Microdevices 13:929–937. doi:10.1007/s10544-011-9562-2
-
(2011)
Biomed Microdevices
, vol.13
, pp. 929-937
-
-
Ahmad, F.1
Seyrig, G.2
Tourlousse, D.M.3
Stedtfeld, R.D.4
Tiedje, J.M.5
Hashsham, S.A.6
-
2
-
-
33846033424
-
DNA microarray for detection of antibiotic resistance determinants in Bacillus anthracis and closely related Bacillus cereus
-
COI: 1:CAS:528:DC%2BD2sXmtVCmug%3D%3D, PID: 17118627
-
Antwerpen MH, Schellhase M, Ehrentreich-Förster E, Bier F, Witte W, Nübel U (2007) DNA microarray for detection of antibiotic resistance determinants in Bacillus anthracis and closely related Bacillus cereus. Mol Cell Probes 21:152–160. doi:10.1016/j.mcp.2006.10.002
-
(2007)
Mol Cell Probes
, vol.21
, pp. 152-160
-
-
Antwerpen, M.H.1
Schellhase, M.2
Ehrentreich-Förster, E.3
Bier, F.4
Witte, W.5
Nübel, U.6
-
3
-
-
84859950119
-
RNA signatures allow rapid identification of pathogens and antibiotic susceptibilities
-
COI: 1:CAS:528:DC%2BC38Xmt12mu74%3D, PID: 22474362
-
Barczak AK, Gomez JE, Kaufmann BB, Hinson ER, Cosimi L, Borowsky ML, Onderdonk AB, Stanley SA, Kaur D, Bryant KF, Knipe DM, Sloutsky A, Hung DT (2012) RNA signatures allow rapid identification of pathogens and antibiotic susceptibilities. Proc Natl Acad Sci U S A 109:6217–6222. doi:10.1073/pnas.1119540109
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 6217-6222
-
-
Barczak, A.K.1
Gomez, J.E.2
Kaufmann, B.B.3
Hinson, E.R.4
Cosimi, L.5
Borowsky, M.L.6
Onderdonk, A.B.7
Stanley, S.A.8
Kaur, D.9
Bryant, K.F.10
Knipe, D.M.11
Sloutsky, A.12
Hung, D.T.13
-
4
-
-
41949114195
-
Development of a miniaturised microarray-based assay for the rapid identification of antimicrobial resistance genes in Gram-negative bacteria
-
COI: 1:CAS:528:DC%2BD1cXkvVOktr0%3D, PID: 18243668
-
Batchelor M, Hopkins KL, Liebana E, Slickers P, Ehricht R, Mafura M, Anjum MF (2008) Development of a miniaturised microarray-based assay for the rapid identification of antimicrobial resistance genes in Gram-negative bacteria. Int J Antimicrob Agents 31:440–451. doi:10.1016/j.ijantimicag.2007.11.017
-
(2008)
Int J Antimicrob Agents
, vol.31
, pp. 440-451
-
-
Batchelor, M.1
Hopkins, K.L.2
Liebana, E.3
Slickers, P.4
Ehricht, R.5
Mafura, M.6
Anjum, M.F.7
-
5
-
-
0026704612
-
Detection of Staphylococcus aureus by polymerase chain reaction amplification of the nuc gene
-
COI: 1:CAS:528:DyaK38Xlt1Gntbk%3D, PID: 1629319, Retrieved from http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=265359&tool=pmcentrez&rendertype=abstract
-
Brakstad O, Aasbakk K, Maeland J (1992) Detection of Staphylococcus aureus by polymerase chain reaction amplification of the nuc gene. J Clin Microbiol 30:1654–1660 Retrieved from http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=265359&tool=pmcentrez&rendertype=abstract
-
(1992)
J Clin Microbiol
, vol.30
, pp. 1654-1660
-
-
Brakstad, O.1
Aasbakk, K.2
Maeland, J.3
-
6
-
-
5444241059
-
A view on antimicrobial resistance in developing countries and responsible risk factors
-
COI: 1:CAS:528:DC%2BD2cXmt1WgsL8%3D, PID: 15288307
-
Byarugaba DK (2004) A view on antimicrobial resistance in developing countries and responsible risk factors. Int J Antimicrob Agents 24:105–110. doi:10.1016/j.ijantimicag.2004.02.015
-
(2004)
Int J Antimicrob Agents
, vol.24
, pp. 105-110
-
-
Byarugaba, D.K.1
-
7
-
-
0141924854
-
Identifying antimicrobial resistance genes with DNA microarrays
-
COI: 1:CAS:528:DC%2BD3sXnvVWmt7Y%3D, PID: 14506043
-
Call DR, Bakko MK, Krug MJ, Roberts MC (2003) Identifying antimicrobial resistance genes with DNA microarrays. Antimicrob Agents Chemother 47:3290–3295. doi:10.1128/AAC.47.10.3290-3295.2003
-
(2003)
Antimicrob Agents Chemother
, vol.47
, pp. 3290-3295
-
-
Call, D.R.1
Bakko, M.K.2
Krug, M.J.3
Roberts, M.C.4
-
8
-
-
9644287940
-
Evolution of ciprofloxacin-resistant Staphylococcus aureus in in vitro pharmacokinetic environments
-
COI: 1:CAS:528:DC%2BD2cXhtVKmt7%2FF, PID: 15561851
-
Campion JJ, Mcnamara PJ, Evans ME (2004) Evolution of ciprofloxacin-resistant Staphylococcus aureus in in vitro pharmacokinetic environments. Antimicrob Agents Chemother 48:4733–4744. doi:10.1128/AAC.48.12.4733
-
(2004)
Antimicrob Agents Chemother
, vol.48
, pp. 4733-4744
-
-
Campion, J.J.1
Mcnamara, P.J.2
Evans, M.E.3
-
9
-
-
84872035208
-
Evaluation of an expanded microarray for detecting antibiotic resistance genes in a broad range of gram-negative bacterial pathogens
-
COI: 1:CAS:528:DC%2BC3sXlt1Srt7c%3D, PID: 23129055
-
Card R, Zhang J, Das P, Cook C, Woodford N, Anjum MF (2013) Evaluation of an expanded microarray for detecting antibiotic resistance genes in a broad range of gram-negative bacterial pathogens. Antimicrob Agents Chemother 57:458–465. doi:10.1128/AAC.01223-12
-
(2013)
Antimicrob Agents Chemother
, vol.57
, pp. 458-465
-
-
Card, R.1
Zhang, J.2
Das, P.3
Cook, C.4
Woodford, N.5
Anjum, M.F.6
-
10
-
-
84887453580
-
Antibiotic resistance threats in the United States, 2013
-
CDC (2013) Antibiotic resistance threats in the United States, 2013. CDC http://www.cdc.gov/drugresistance/threat-report-2013/pdf/ar-threats-2013-508.pdf. Accessed 2 Jan 2015
-
(2013)
CDC
-
-
-
11
-
-
84874510270
-
Antimicrobial resistance in the European Union and the world
-
Chan M (2012) Antimicrobial resistance in the European Union and the world. WHO http://www.who.int/dg/speeches/2012/amr_20120314/en/index.html. Accessed 1 Jan 2015
-
(2012)
WHO
-
-
Chan, M.1
-
12
-
-
84939573998
-
-
Clinical and Laboratory Standards Institute (2007) Performance standards for antimicrobial susceptibility testing—informational supplement M100. Clinical and Laboratory Standards Institute. 12 Dec 2014
-
Clinical and Laboratory Standards Institute (2007) Performance standards for antimicrobial susceptibility testing—informational supplement M100. Clinical and Laboratory Standards Institute. http://www.microbiolab-bg.com/CLSI.pdf. 12 Dec 2014
-
-
-
-
13
-
-
84891787231
-
Ribosomal Database Project: data and tools for high throughput rRNA analysis
-
COI: 1:CAS:528:DC%2BC2cXoslGk, PID: 24288368
-
Cole JR, Wang Q, Fish JA, Chai B, McGarrell DM, Sun Y, Brown CT, Porras-Alfaro A, Kuske CR, Tiedje JM (2014) Ribosomal Database Project: data and tools for high throughput rRNA analysis. Nucleic Acids Res 42:D633–D642. doi:10.1093/nar/gkt1244
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D633-D642
-
-
Cole, J.R.1
Wang, Q.2
Fish, J.A.3
Chai, B.4
McGarrell, D.M.5
Sun, Y.6
Brown, C.T.7
Porras-Alfaro, A.8
Kuske, C.R.9
Tiedje, J.M.10
-
14
-
-
84884234854
-
DNA microarray for genotyping antibiotic resistance determinants in Acinetobacter baumannii clinical isolates
-
COI: 1:CAS:528:DC%2BC3sXhsVygtLvO, PID: 23856783
-
Dally S, Lemuth K, Kaase M, Rupp S, Knabbe C, Weile J (2013) DNA microarray for genotyping antibiotic resistance determinants in Acinetobacter baumannii clinical isolates. Antimicrob Agents Chemother 57:4761–4768. doi:10.1128/AAC.00863-13
-
(2013)
Antimicrob Agents Chemother
, vol.57
, pp. 4761-4768
-
-
Dally, S.1
Lemuth, K.2
Kaase, M.3
Rupp, S.4
Knabbe, C.5
Weile, J.6
-
15
-
-
80053185902
-
The clinical predictive value (or lack thereof) of the results of in vitro antimicrobial susceptibility tests
-
Doern GV, Brecher SM (2011) The clinical predictive value (or lack thereof) of the results of in vitro antimicrobial susceptibility tests. J Clin Microbiol 49:S11–S14. doi:10.1128/JCM.00580-11
-
(2011)
J Clin Microbiol
, vol.49
, pp. S11-S14
-
-
Doern, G.V.1
Brecher, S.M.2
-
16
-
-
84864110038
-
Detection of Bacillus anthracis from spores and cells by loop-mediated isothermal amplification without sample preparation
-
COI: 1:CAS:528:DC%2BC38XovVaitbw%3D, PID: 22677603
-
Dugan L, Bearinger J, Hinckley A, Strout C, Souza B (2012) Detection of Bacillus anthracis from spores and cells by loop-mediated isothermal amplification without sample preparation. J Microbiol Methods 90:280–284. doi:10.1016/j.mimet.2012.05.022
-
(2012)
J Microbiol Methods
, vol.90
, pp. 280-284
-
-
Dugan, L.1
Bearinger, J.2
Hinckley, A.3
Strout, C.4
Souza, B.5
-
17
-
-
77951132271
-
The bacterial challenge: time to react
-
ECDC and EMEA Joint Technical Report (2009) The bacterial challenge: time to react. European Centre for Disease Prevention and Control http://www.ecdc.europa.eu/en/publications/_layouts/forms/Publication_DispForm.aspx?ID=199&List=4f55ad51-4aed-4d32-b960-af70113dbb90. Accessed 11 Dec 2014
-
(2009)
European Centre for Disease Prevention and Control
-
-
-
18
-
-
79955759821
-
Critical shortage of new antibiotics in development against multidrug-resistant bacteria-time to react is now
-
PID: 21435939
-
Freire-Moran L, Aronsson B, Manz C, Gyssens IC, So AD, Monnet DL, Cars O (2011) Critical shortage of new antibiotics in development against multidrug-resistant bacteria-time to react is now. Drug Resist Updat 14:118–124. doi:10.1016/j.drup.2011.02.003
-
(2011)
Drug Resist Updat
, vol.14
, pp. 118-124
-
-
Freire-Moran, L.1
Aronsson, B.2
Manz, C.3
Gyssens, I.C.4
So, A.D.5
Monnet, D.L.6
Cars, O.7
-
19
-
-
78649712445
-
The continuing crisis in antibiotic resistance
-
COI: 1:CAS:528:DC%2BC3cXhsFant7%2FK, PID: 21129629
-
French GL (2010) The continuing crisis in antibiotic resistance. Int J Antimicrob Agents 36:S3–S7. doi:10.1016/S0924-8579(10)70003-0
-
(2010)
Int J Antimicrob Agents
, vol.36
, pp. S3-S7
-
-
French, G.L.1
-
20
-
-
31344438735
-
DNA microarray detection of antimicrobial resistance genes in diverse bacteria
-
COI: 1:CAS:528:DC%2BD28XotVeqtw%3D%3D, PID: 16427254
-
Frye JG, Jesse T, Long F, Rondeau G, Porwollik S, McClelland M, Fedorka-Cray PJ (2006) DNA microarray detection of antimicrobial resistance genes in diverse bacteria. Int J Antimicrob Agents 27:138–151. doi:10.1016/j.ijantimicag.2005.09.021
-
(2006)
Int J Antimicrob Agents
, vol.27
, pp. 138-151
-
-
Frye, J.G.1
Jesse, T.2
Long, F.3
Rondeau, G.4
Porwollik, S.5
McClelland, M.6
Fedorka-Cray, P.J.7
-
21
-
-
77949620454
-
Development of a DNA microarray to detect antimicrobial resistance genes identified in the National Center for Biotechnology Information database
-
COI: 1:CAS:528:DC%2BC3cXksl2msL0%3D, PID: 19916789
-
Frye JG, Lindsey RL, Rondeau G, Porwollik S, Long F, McClelland M, Fedorka-Cray PJ (2010) Development of a DNA microarray to detect antimicrobial resistance genes identified in the National Center for Biotechnology Information database. Microb Drug Resist 16:9–19. doi:10.1089/mdr.2009.0082
-
(2010)
Microb Drug Resist
, vol.16
, pp. 9-19
-
-
Frye, J.G.1
Lindsey, R.L.2
Rondeau, G.3
Porwollik, S.4
Long, F.5
McClelland, M.6
Fedorka-Cray, P.J.7
-
22
-
-
84862827057
-
Development of a high-throughput DNA microarray for drug-resistant gene detection and its preliminary application
-
COI: 1:CAS:528:DC%2BC38XlslSns7Y%3D, PID: 22619747
-
Fu Y, Pan Y, Pan M, Wang Y, Liu W, Li Y (2012) Development of a high-throughput DNA microarray for drug-resistant gene detection and its preliminary application. J Microbiol Methods 89:110–118. doi:10.1016/j.mimet.2012.02.010
-
(2012)
J Microbiol Methods
, vol.89
, pp. 110-118
-
-
Fu, Y.1
Pan, Y.2
Pan, M.3
Wang, Y.4
Liu, W.5
Li, Y.6
-
23
-
-
78649600190
-
Use of a bacterial antimicrobial resistance gene microarray for the identification of resistant Staphylococcus aureus
-
COI: 1:CAS:528:DC%2BC3MXjslKksA%3D%3D, PID: 21083822
-
Garneau P, Labrecque O, Maynard C, Messier S, Masson L, Archambault M, Harel J (2010) Use of a bacterial antimicrobial resistance gene microarray for the identification of resistant Staphylococcus aureus. Zoonoses Public Health 57:94–99. doi:10.1111/j.1863-2378.2010.01358.x
-
(2010)
Zoonoses Public Health
, vol.57
, pp. 94-99
-
-
Garneau, P.1
Labrecque, O.2
Maynard, C.3
Messier, S.4
Masson, L.5
Archambault, M.6
Harel, J.7
-
24
-
-
0029945614
-
Bleomycin resistance in Staphylococcus aureus clinical isolates
-
COI: 1:CAS:528:DyaK28XhtVaisbY%3D, PID: 8647775
-
Gennimata D, Davies J, Tsiftsoglou A (1996) Bleomycin resistance in Staphylococcus aureus clinical isolates. J Antimicrob Chemother 37:65–75. doi:10.1093/jac/37.1.65
-
(1996)
J Antimicrob Chemother
, vol.37
, pp. 65-75
-
-
Gennimata, D.1
Davies, J.2
Tsiftsoglou, A.3
-
25
-
-
80053327426
-
Antibiotic resistance mechanisms of clinically important bacteria
-
Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/21822035
-
Giedraitienė A, Vitkauskienė A, Naginienė R, Pavilonis A (2011) Antibiotic resistance mechanisms of clinically important bacteria. Medicina (Kaunas) 47:137–146 Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/21822035
-
(2011)
Medicina (Kaunas)
, vol.47
, pp. 137-146
-
-
Giedraitienė, A.1
Vitkauskienė, A.2
Naginienė, R.3
Pavilonis, A.4
-
26
-
-
77951006116
-
The global problem of antibiotic resistance
-
COI: 1:CAS:528:DC%2BC3cXmvFKqsrg%3D, PID: 20370622
-
Gootz TD (2010) The global problem of antibiotic resistance. Crit Rev Immunol 30:79–93. doi:10.1615/CritRevImmunol.v30.i1.60
-
(2010)
Crit Rev Immunol
, vol.30
, pp. 79-93
-
-
Gootz, T.D.1
-
27
-
-
84861984339
-
Prevalence and antimicrobial resistance of Enterococcus spp and Staphylococcus spp isolated from surfaces in a veterinary teaching hospital
-
COI: 1:CAS:528:DC%2BC38XhtFWht7fN, PID: 22657930
-
Hamilton E, Kaneene JB, May KJ, Kruger JM, Schall W, Beal MW, DeCamp CE (2012) Prevalence and antimicrobial resistance of Enterococcus spp and Staphylococcus spp isolated from surfaces in a veterinary teaching hospital. J Am Vet Med Assoc 240:1463–1473. doi:10.2460/javma.240.12.1463
-
(2012)
J Am Vet Med Assoc
, vol.240
, pp. 1463-1473
-
-
Hamilton, E.1
Kaneene, J.B.2
May, K.J.3
Kruger, J.M.4
Schall, W.5
Beal, M.W.6
DeCamp, C.E.7
-
28
-
-
0035283754
-
How to optimize the drop plate method for enumerating bacteria
-
COI: 1:STN:280:DC%2BD3MzltlOmtQ%3D%3D, PID: 11165341
-
Herigstad B, Hamilton M, Heersink J (2001) How to optimize the drop plate method for enumerating bacteria. J Microbiol Methods 44:121–129. doi:10.1016/S0167-7012(00)00241-4
-
(2001)
J Microbiol Methods
, vol.44
, pp. 121-129
-
-
Herigstad, B.1
Hamilton, M.2
Heersink, J.3
-
29
-
-
0037304131
-
Insights on antibiotic resistance of Staphylococcus aureus from its whole genome: genomic island SCC
-
COI: 1:CAS:528:DC%2BD3sXitlWgsrY%3D, PID: 12654286
-
Ito T, Okuma K, Ma XX, Yuzawa H, Hiramatsu K (2003) Insights on antibiotic resistance of Staphylococcus aureus from its whole genome: genomic island SCC. Drug Resist Updat 6:41–52. doi:10.1016/S1368-7646(03)00003-7
-
(2003)
Drug Resist Updat
, vol.6
, pp. 41-52
-
-
Ito, T.1
Okuma, K.2
Ma, X.X.3
Yuzawa, H.4
Hiramatsu, K.5
-
30
-
-
72849135301
-
Antimicrobial susceptibility testing: a review of general principles and contemporary practices
-
COI: 1:CAS:528:DC%2BD1MXhs1Sjt7fI, PID: 19857164
-
Jorgensen JH, Ferraro MJ (2009) Antimicrobial susceptibility testing: a review of general principles and contemporary practices. Clin Infect Dis 49:1749–1755. doi:10.1086/647952
-
(2009)
Clin Infect Dis
, vol.49
, pp. 1749-1755
-
-
Jorgensen, J.H.1
Ferraro, M.J.2
-
31
-
-
35048897547
-
Cloning, sequence analysis and three-dimensional structure prediction of DNA Pol I from thermophilic Geobacillus sp. MKK Isolated from an Iranian Hot Spring
-
COI: 1:CAS:528:DC%2BD2sXht1WksL7E, PID: 18025581
-
Khalaj-Kondori M, Sadeghizadeh M, Khajeh K, Naderi-Manesh H, Ahadi AM, Emamzadeh A (2007) Cloning, sequence analysis and three-dimensional structure prediction of DNA Pol I from thermophilic Geobacillus sp. MKK Isolated from an Iranian Hot Spring. Appl Biochem Biotechnol 142:200–208. doi:10.1007/s12010-007-0010-y
-
(2007)
Appl Biochem Biotechnol
, vol.142
, pp. 200-208
-
-
Khalaj-Kondori, M.1
Sadeghizadeh, M.2
Khajeh, K.3
Naderi-Manesh, H.4
Ahadi, A.M.5
Emamzadeh, A.6
-
32
-
-
80053217117
-
Molecular detection of resistance determinants
-
Ledeboer NA, Hodinka RL (2011) Molecular detection of resistance determinants. J Clin Microbiol 49:S20–S24. doi:10.1128/JCM.00771-11
-
(2011)
J Clin Microbiol
, vol.49
, pp. S20-S24
-
-
Ledeboer, N.A.1
Hodinka, R.L.2
-
33
-
-
10944272743
-
Antibacterial resistance worldwide: causes, challenges and responses
-
COI: 1:CAS:528:DC%2BD2cXhtVeht7fF, PID: 15577930
-
Levy SB, Marshall B (2004) Antibacterial resistance worldwide: causes, challenges and responses. Nat Med 10:S122–S129. doi:10.1038/nm1145
-
(2004)
Nat Med
, vol.10
, pp. S122-S129
-
-
Levy, S.B.1
Marshall, B.2
-
34
-
-
58149183697
-
ARDB—Antibiotic Resistance Genes Database
-
COI: 1:CAS:528:DC%2BD1cXhsFejtL7F, PID: 18832362
-
Liu B, Pop M (2009) ARDB—Antibiotic Resistance Genes Database. Nucleic Acids Res 37:D443–D447. doi:10.1093/nar/gkn656
-
(2009)
Nucleic Acids Res
, vol.37
, pp. D443-D447
-
-
Liu, B.1
Pop, M.2
-
35
-
-
84857135712
-
In-feed antibiotic effects on the swine intestinal microbiome
-
COI: 1:CAS:528:DC%2BC38XitlKltrk%3D, PID: 22307632
-
Looft T, Johnson TA, Allen HK, Bayles DO, Alt DP, Stedtfeld RD, Sul WJ, Stedtfeld TM, Chai B, Cole JR, Hashsham SA, Tiedje JM, Stanton TB (2012) In-feed antibiotic effects on the swine intestinal microbiome. Proc Natl Acad Sci U S A 109:1691–1696. doi:10.1073/pnas.1120238109
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 1691-1696
-
-
Looft, T.1
Johnson, T.A.2
Allen, H.K.3
Bayles, D.O.4
Alt, D.P.5
Stedtfeld, R.D.6
Sul, W.J.7
Stedtfeld, T.M.8
Chai, B.9
Cole, J.R.10
Hashsham, S.A.11
Tiedje, J.M.12
Stanton, T.B.13
-
36
-
-
0035217997
-
Susceptibility testing. Phenotypic and genotypic tests for bacteria and mycobacteria
-
COI: 1:STN:280:DC%2BD38%2FlsFWqtQ%3D%3D
-
Louie M, Cockerill 3rd FR (2001) Susceptibility testing. Phenotypic and genotypic tests for bacteria and mycobacteria. Infect Dis Clin N Am 15:1205–1226. doi:10.1016/S0891-5520(05)70191-4
-
(2001)
Infect Dis Clin N Am
, vol.15
, pp. 1205-1226
-
-
Louie, M.1
Cockerill, F.R.2
-
37
-
-
82455220469
-
DNA microarray genotyping and virulence and antimicrobial resistance gene profiling of methicillin-resistant Staphylococcus aureus bloodstream isolates from renal patients
-
COI: 1:CAS:528:DC%2BC38Xhslynu7k%3D, PID: 21940465
-
McNicholas S, Shore AC, Coleman DC, Humphreys H, Hughes DF (2011) DNA microarray genotyping and virulence and antimicrobial resistance gene profiling of methicillin-resistant Staphylococcus aureus bloodstream isolates from renal patients. J Clin Microbiol 49:4349–4351. doi:10.1128/JCM.05017-11
-
(2011)
J Clin Microbiol
, vol.49
, pp. 4349-4351
-
-
McNicholas, S.1
Shore, A.C.2
Coleman, D.C.3
Humphreys, H.4
Hughes, D.F.5
-
38
-
-
25144505220
-
Rapid genotyping of methicillin-resistant Staphylococcus aureus (MRSA) isolates using miniaturised oligonucleotide arrays
-
COI: 1:CAS:528:DC%2BD2MXhtFeqtrfL, PID: 16153257
-
Monecke S, Ehricht R (2005) Rapid genotyping of methicillin-resistant Staphylococcus aureus (MRSA) isolates using miniaturised oligonucleotide arrays. Clin Microbiol Infect 11:825–833. doi:10.1111/j.1469-0691.2005.01243.x
-
(2005)
Clin Microbiol Infect
, vol.11
, pp. 825-833
-
-
Monecke, S.1
Ehricht, R.2
-
39
-
-
84868031097
-
Rapid microarray-based identification of different mecA alleles in Staphylococci
-
COI: 1:CAS:528:DC%2BC38XhsF2iur7K, PID: 22890767
-
Monecke S, Müller E, Schwarz S, Hotzel H, Ehricht R (2012) Rapid microarray-based identification of different mecA alleles in Staphylococci. Antimicrob Agents Chemother 56:5547–5554. doi:10.1128/AAC.00574-12
-
(2012)
Antimicrob Agents Chemother
, vol.56
, pp. 5547-5554
-
-
Monecke, S.1
Müller, E.2
Schwarz, S.3
Hotzel, H.4
Ehricht, R.5
-
40
-
-
65349100762
-
Loop-mediated isothermal amplification (LAMP): a rapid, accurate, and cost-effective diagnostic method for infectious diseases
-
COI: 1:CAS:528:DC%2BD1MXltVagtr0%3D, PID: 19396514
-
Mori Y, Notomi T (2009) Loop-mediated isothermal amplification (LAMP): a rapid, accurate, and cost-effective diagnostic method for infectious diseases. J Infect Chemother 15:62–69. doi:10.1007/s10156-009-0669-9
-
(2009)
J Infect Chemother
, vol.15
, pp. 62-69
-
-
Mori, Y.1
Notomi, T.2
-
41
-
-
0036599262
-
Accelerated reaction by loop mediated isothermal amplification using loop primers
-
COI: 1:CAS:528:DC%2BD38XlsFWqsr4%3D, PID: 12144774
-
Nagamine K, Hase T, Notomi T (2002) Accelerated reaction by loop mediated isothermal amplification using loop primers. Mol Cell Probes 16:223–229. doi:10.1006/mcpr.2002.0415
-
(2002)
Mol Cell Probes
, vol.16
, pp. 223-229
-
-
Nagamine, K.1
Hase, T.2
Notomi, T.3
-
42
-
-
22544447420
-
Antimicrobial resistance in developing countries. Part I: recent trends and current status
-
COI: 1:CAS:528:DC%2BD2MXps1Cnsrc%3D, PID: 16048717
-
Okeke IN, Laxminarayan R, Bhutta ZA, Duse AG, Jenkins P, O’Brien T, Klugman KP (2005) Antimicrobial resistance in developing countries. Part I: recent trends and current status. Lancet Infect Dis 5:481–493. doi:10.1016/S1473-3099(05)70189-4
-
(2005)
Lancet Infect Dis
, vol.5
, pp. 481-493
-
-
Okeke, I.N.1
Laxminarayan, R.2
Bhutta, Z.A.3
Duse, A.G.4
Jenkins, P.5
O’Brien, T.6
Klugman, K.P.7
-
43
-
-
18544376565
-
Microarray-based detection of 90 antibiotic resistance genes of gram-positive bacteria
-
COI: 1:CAS:528:DC%2BD2MXkvFOqtr4%3D, PID: 15872258
-
Perreten V, Vorlet-Fawer L, Slickers P, Ehricht R, Kuhnert P, Frey J (2005) Microarray-based detection of 90 antibiotic resistance genes of gram-positive bacteria. J Clin Microbiol 43:2291–2302. doi:10.1128/JCM.43.5.2291-2302.2005
-
(2005)
J Clin Microbiol
, vol.43
, pp. 2291-2302
-
-
Perreten, V.1
Vorlet-Fawer, L.2
Slickers, P.3
Ehricht, R.4
Kuhnert, P.5
Frey, J.6
-
44
-
-
84930646352
-
Detection of Acute HIV-1 Infection by RT-LAMP
-
PID: 25993381
-
Rudolph DL, Sullivan V, Owen SM, Curtis KA (2015) Detection of Acute HIV-1 Infection by RT-LAMP. PLoS One 10:e0126609. doi:10.1371/journal.pone.0126609
-
(2015)
PLoS One
, vol.10
, pp. e0126609
-
-
Rudolph, D.L.1
Sullivan, V.2
Owen, S.M.3
Curtis, K.A.4
-
45
-
-
77953934856
-
Tackling antibiotic resistance
-
So A, Gupta N, Cars O (2010) Tackling antibiotic resistance. BMJ 340:1091–1092. doi:10.1136/bmj.c2071
-
(2010)
BMJ
, vol.340
, pp. 1091-1092
-
-
So, A.1
Gupta, N.2
Cars, O.3
-
46
-
-
84887607526
-
Evaluation of colorimetric detection methods for Shigella, Salmonella, and Vibrio cholerae by loop mediated isothermal amplification
-
COI: 1:CAS:528:DC%2BC3sXhslSlsrvI, PID: 24157057
-
Soli KW, Kas M, Maure T, Umezaki M, Morita A, Siba PM, Greenhill AR, Horwood PF (2013) Evaluation of colorimetric detection methods for Shigella, Salmonella, and Vibrio cholerae by loop mediated isothermal amplification. Diagn Microbiol Infect Dis 77:321–323. doi:10.1016/j.diagmicrobio.2013.09.009
-
(2013)
Diagn Microbiol Infect Dis
, vol.77
, pp. 321-323
-
-
Soli, K.W.1
Kas, M.2
Maure, T.3
Umezaki, M.4
Morita, A.5
Siba, P.M.6
Greenhill, A.R.7
Horwood, P.F.8
-
47
-
-
84872806450
-
The future of antibiotics and resistance
-
COI: 1:CAS:528:DC%2BC3sXhsFSnsL0%3D, PID: 23343059
-
Spellberg B, Bartlett J, Gilbert D (2013) The future of antibiotics and resistance. N Engl J Med 368:299–302. doi:10.1056/NEJMp1215093
-
(2013)
N Engl J Med
, vol.368
, pp. 299-302
-
-
Spellberg, B.1
Bartlett, J.2
Gilbert, D.3
-
48
-
-
84858988492
-
Gene-Z: a device for point of care genetic testing using a smartphone
-
COI: 1:CAS:528:DC%2BC38XktlegtL8%3D, PID: 22374412
-
Stedtfeld RD, Tourlousse DM, Seyrig G, Stedtfeld TM, Kronlein M, Price S, Hashsham SA (2012) Gene-Z: a device for point of care genetic testing using a smartphone. Lab Chip 12:1454–1462. doi:10.1039/c2lc21226a
-
(2012)
Lab Chip
, vol.12
, pp. 1454-1462
-
-
Stedtfeld, R.D.1
Tourlousse, D.M.2
Seyrig, G.3
Stedtfeld, T.M.4
Kronlein, M.5
Price, S.6
Hashsham, S.A.7
-
49
-
-
84858282256
-
Meticillin-resistant Staphylococcus aureus (MRSA): global epidemiology and harmonisation of typing methods
-
COI: 1:CAS:528:DC%2BC38XjsFKqtb8%3D, PID: 22230333
-
Stefani S, Chung DR, Lindsay JA, Friedrich AW, Kearns AM, Westh H, Mackenzie FM (2012) Meticillin-resistant Staphylococcus aureus (MRSA): global epidemiology and harmonisation of typing methods. Int J Antimicrob Agents 39:273–282. doi:10.1016/j.ijantimicag.2011.09.030
-
(2012)
Int J Antimicrob Agents
, vol.39
, pp. 273-282
-
-
Stefani, S.1
Chung, D.R.2
Lindsay, J.A.3
Friedrich, A.W.4
Kearns, A.M.5
Westh, H.6
Mackenzie, F.M.7
-
50
-
-
33947173255
-
DNA microarray for the detection of therapeutically relevant antibiotic resistance determinants in clinical isolates of Staphylococcus aureus
-
COI: 1:CAS:528:DC%2BD2sXjtVagsb0%3D, PID: 17123780
-
Strommenger B, Schmidt C, Werner G, Roessle-Lorch B, Bachmann TT, Witte W (2007) DNA microarray for the detection of therapeutically relevant antibiotic resistance determinants in clinical isolates of Staphylococcus aureus. Mol Cell Probes 21:161–170. doi:10.1016/j.mcp.2006.10.003
-
(2007)
Mol Cell Probes
, vol.21
, pp. 161-170
-
-
Strommenger, B.1
Schmidt, C.2
Werner, G.3
Roessle-Lorch, B.4
Bachmann, T.T.5
Witte, W.6
-
51
-
-
84863417589
-
Comparative genomic analysis of the genus Staphylococcus including Staphylococcus aureus and its newly described sister species Staphylococcus simiae
-
COI: 1:CAS:528:DC%2BC38Xmt1eiur8%3D, PID: 22272658
-
Suzuki H, Lefébure T, Bitar PP, Stanhope MJ (2012) Comparative genomic analysis of the genus Staphylococcus including Staphylococcus aureus and its newly described sister species Staphylococcus simiae. BMC Genomics 13:38. doi:10.1186/1471-2164-13-38
-
(2012)
BMC Genomics
, vol.13
, pp. 38
-
-
Suzuki, H.1
Lefébure, T.2
Bitar, P.P.3
Stanhope, M.J.4
-
52
-
-
0033791727
-
Mechanism of quinolone resistance in Staphylococcus aureus
-
COI: 1:CAS:528:DC%2BD3cXns1Ggurw%3D, PID: 11810552
-
Tanaka M, Wang T, Onodera Y, Uchida Y, Sato K (2000) Mechanism of quinolone resistance in Staphylococcus aureus. J Infect Chemother 6:131–139
-
(2000)
J Infect Chemother
, vol.6
, pp. 131-139
-
-
Tanaka, M.1
Wang, T.2
Onodera, Y.3
Uchida, Y.4
Sato, K.5
-
53
-
-
85018177864
-
Recommendations for future collaboration between the U.S
-
TATFAR (2011) Recommendations for future collaboration between the U.S. and EU. http://ecdc.europa.eu/en/activities/diseaseprogrammes/tatfar/documents/210911_tatfar_report.pdf
-
(2011)
and EU
-
-
-
54
-
-
43149084823
-
Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products
-
COI: 1:CAS:528:DC%2BD1cXltlSgsb8%3D, PID: 18451795
-
Tomita N, Mori Y, Kanda H, Notomi T (2008) Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products. Nat Protoc 3:877–882. doi:10.1038/nprot.2008.57
-
(2008)
Nat Protoc
, vol.3
, pp. 877-882
-
-
Tomita, N.1
Mori, Y.2
Kanda, H.3
Notomi, T.4
-
55
-
-
84865431703
-
A polymer microfluidic chip for quantitative detection of multiple water- and foodborne pathogens using real-time fluorogenic loop-mediated isothermal amplification
-
COI: 1:CAS:528:DC%2BC38XpvV2jsL8%3D, PID: 22566273
-
Tourlousse DM, Ahmad F, Stedtfeld RD, Seyrig G, Tiedje JM, Hashsham SA (2012) A polymer microfluidic chip for quantitative detection of multiple water- and foodborne pathogens using real-time fluorogenic loop-mediated isothermal amplification. Biomed Microdevices 14:769–778. doi:10.1007/s10544-012-9658-3
-
(2012)
Biomed Microdevices
, vol.14
, pp. 769-778
-
-
Tourlousse, D.M.1
Ahmad, F.2
Stedtfeld, R.D.3
Seyrig, G.4
Tiedje, J.M.5
Hashsham, S.A.6
-
56
-
-
17044363144
-
Detection of antibiotic resistance genes in different Salmonella serovars by oligonucleotide microarray analysis
-
PID: 15823391
-
van Hoek AH, Scholtens IM, Cloeckaert A, Aarts HJ (2005) Detection of antibiotic resistance genes in different Salmonella serovars by oligonucleotide microarray analysis. J Microbiol Methods 62:13–23. doi:10.1016/j.mimet.2005.01.004
-
(2005)
J Microbiol Methods
, vol.62
, pp. 13-23
-
-
van Hoek, A.H.1
Scholtens, I.M.2
Cloeckaert, A.3
Aarts, H.J.4
-
57
-
-
0028892317
-
Specific detection of methicillin-resistant Staphylococcus species by multiplex PCR
-
COI: 1:CAS:528:DyaK2MXpt1Kqs7k%3D, PID: 8576335, Retrieved from http://jcm.asm.org/content/33/11/2864
-
Vannuffel P, Gigi J, Ezzedine H, Vandercam B, Delmee M, Wauters G, Gala J (1995) Specific detection of methicillin-resistant Staphylococcus species by multiplex PCR. J Clin Microbiol 33:2864–2867 Retrieved from http://jcm.asm.org/content/33/11/2864
-
(1995)
J Clin Microbiol
, vol.33
, pp. 2864-2867
-
-
Vannuffel, P.1
Gigi, J.2
Ezzedine, H.3
Vandercam, B.4
Delmee, M.5
Wauters, G.6
Gala, J.7
-
58
-
-
35548995922
-
DNA microarray for genotyping multidrug-resistant Pseudomonas aeruginosa clinical isolates
-
COI: 1:CAS:528:DC%2BD2sXht1KhsbzI, PID: 17888613
-
Weile J, Schmid RD, Bachmann TT, Susa M, Knabbe C (2007) DNA microarray for genotyping multidrug-resistant Pseudomonas aeruginosa clinical isolates. Diagn Microbiol Infect Dis 59:325–338. doi:10.1016/j.diagmicrobio.2007.06.005
-
(2007)
Diagn Microbiol Infect Dis
, vol.59
, pp. 325-338
-
-
Weile, J.1
Schmid, R.D.2
Bachmann, T.T.3
Susa, M.4
Knabbe, C.5
-
59
-
-
0036839985
-
mecA gene is widely disseminated in Staphylococcus aureus population
-
COI: 1:CAS:528:DC%2BD38XptVOjur8%3D, PID: 12409360
-
Wielders CL, Fluit AC, Brisse S, Verhoef J, Schmitz FJ (2002) mecA gene is widely disseminated in Staphylococcus aureus population. J Clin Microbiol 40:3970–3975. doi:10.1128/JCM.40.11.3970-3975.2002
-
(2002)
J Clin Microbiol
, vol.40
, pp. 3970-3975
-
-
Wielders, C.L.1
Fluit, A.C.2
Brisse, S.3
Verhoef, J.4
Schmitz, F.J.5
-
60
-
-
36348997668
-
Use of a DNA microarray for simultaneous detection of antibiotic resistance genes among staphylococcal clinical isolates
-
COI: 1:CAS:528:DC%2BD2sXhsVWrtL3F, PID: 17728472
-
Zhu LX, Zhang ZW, Wang C, Yan HW, Jiang D, Zhang Q, Cheng J (2007) Use of a DNA microarray for simultaneous detection of antibiotic resistance genes among staphylococcal clinical isolates. J Clin Microbiol 45:3514–3521. doi:10.1128/JCM.02340-06
-
(2007)
J Clin Microbiol
, vol.45
, pp. 3514-3521
-
-
Zhu, L.X.1
Zhang, Z.W.2
Wang, C.3
Yan, H.W.4
Jiang, D.5
Zhang, Q.6
Cheng, J.7
-
61
-
-
84874494333
-
Diverse and abundant antibiotic resistance genes in Chinese swine farms
-
COI: 1:CAS:528:DC%2BC3sXkvVKnsrw%3D, PID: 23401528
-
Zhu YG, Johnson TA, Su JQ, Qiao M, Guo GX, Stedtfeld RD, Hashsham SA, Tiedje JM (2013) Diverse and abundant antibiotic resistance genes in Chinese swine farms. Proc Natl Acad Sci U S A 110:3435–3440. doi:10.1073/pnas.1222743110
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 3435-3440
-
-
Zhu, Y.G.1
Johnson, T.A.2
Su, J.Q.3
Qiao, M.4
Guo, G.X.5
Stedtfeld, R.D.6
Hashsham, S.A.7
Tiedje, J.M.8
|