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Volumn 16, Issue 1, 2010, Pages 9-19

Development of a DNA microarray to detect antimicrobial resistance genes identified in the national center for biotechnology information database

Author keywords

[No Author keywords available]

Indexed keywords

AMINOGLYCOSIDE ANTIBIOTIC AGENT; AMOXICILLIN PLUS CLAVULANIC ACID; APRAMYCIN; BACITRACIN; BETA LACTAM ANTIBIOTIC; CEFALOTIN; CEFEPIME; CEFOXITIN; CEFTRIAXONE; CHLORAMPHENICOL; HEAVY METAL; IMIPENEM; KANAMYCIN; LINCOSAMIDE DERIVATIVE; MACROLIDE; METRONIDAZOLE; NITROFURANTOIN; OXACILLIN; OXAZOLIDINONE DERIVATIVE; POLYKETIDE; POLYPEPTIDE ANTIBIOTIC AGENT; QUATERNARY AMMONIUM DERIVATIVE; QUINOLINE DERIVED ANTIINFECTIVE AGENT; RIFAMYCIN; STREPTOGRAMIN; SULFANILAMIDE; SULFONAMIDE; TETRACYCLINE; TRIMETHOPRIM DERIVATIVE; UNINDEXED DRUG;

EID: 77949620454     PISSN: 10766294     EISSN: None     Source Type: Journal    
DOI: 10.1089/mdr.2009.0082     Document Type: Article
Times cited : (55)

References (46)
  • 1
    • 26444491047 scopus 로고    scopus 로고
    • Resistance to antibiotics: Are we in the post-antibiotic era?
    • Alanis, A.J. 2005. Resistance to antibiotics: are we in the post-antibiotic era? Arch. Med. Res. 36:697-705.
    • (2005) Arch Med. Res. , vol.36 , pp. 697-705
    • Alanis, A.J.1
  • 3
    • 0033939062 scopus 로고    scopus 로고
    • Analysis of DNA microarrays by nondestructive fluorescent staining using SYBR green II
    • Battaglia, C., G. Salani, C. Consolandi, L.R. Bernardi, and G. De Bellis. 2000. Analysis of DNA microarrays by nondestructive fluorescent staining using SYBR green II. Biotechniques 29:78-81.
    • (2000) Biotechniques , vol.29 , pp. 78-81
    • Battaglia, C.1    Salani, G.2    Consolandi, C.3    Bernardi, L.R.4    De Bellis, G.5
  • 4
    • 0036792158 scopus 로고    scopus 로고
    • Toward rapid realtime molecular diagnostic to guide smart use of antimicrobials
    • Boissinot, M., and M.G. Bergeron. 2002. Toward rapid realtime molecular diagnostic to guide smart use of antimicrobials. Curr. Opin. Microbiol. 5:478-482.
    • (2002) Curr. Opin. Microbiol. , vol.5 , pp. 478-482
    • Boissinot, M.1    Bergeron, M.G.2
  • 5
    • 33646558541 scopus 로고    scopus 로고
    • Development and validation of an oligonucleotide microarray for detection of multiple virulence and antimicrobial resistance genes in Escherichia coli
    • Bruant, G., C. Maynard, S. Bekal, I. Gaucher, L. Masson, R. Brousseau, and J. Harel. 2006. Development and validation of an oligonucleotide microarray for detection of multiple virulence and antimicrobial resistance genes in Escherichia coli. Appl. Environ. Microbiol. 72:3780-3784.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 3780-3784
    • Bruant, G.1    Maynard, C.2    Bekal, S.3    Gaucher, I.4    Masson, L.5    Brousseau, R.6    Harel, J.7
  • 6
    • 55849146664 scopus 로고    scopus 로고
    • Development, stability, and molecular mechanisms of macrolide resistance in Campylobacter jejuni
    • Caldwell, D.B., Y. Wang, and J. Lin. 2008. Development, stability, and molecular mechanisms of macrolide resistance in Campylobacter jejuni. Antimicrob. Agents Chemother. 52:3947-3954.
    • (2008) Antimicrob. Agents Chemother. , vol.52 , pp. 3947-3954
    • Caldwell, D.B.1    Wang, Y.2    Lin, J.3
  • 9
    • 34547848789 scopus 로고    scopus 로고
    • Bacterial DNA microarrays for clinical microbiology: The early logarithmic phase
    • Cassone, M., A. Giordano, and G. Pozzi. 2007. Bacterial DNA microarrays for clinical microbiology: the early logarithmic phase. Front Biosci. 12:2658-2669.
    • (2007) Front Biosci. , vol.12 , pp. 2658-2669
    • Cassone, M.1    Giordano, A.2    Pozzi, G.3
  • 10
    • 15944394780 scopus 로고    scopus 로고
    • ADNAmicroarray for identification of virulence and antimicrobial resistance genes in Salmonella serovars and Escherichia coli
    • Chen, S., S. Zhao, P.F. McDermott, C.M. Schroeder, D.G. White,andJ.Meng. 2005.ADNAmicroarray for identification of virulence and antimicrobial resistance genes in Salmonella serovars and Escherichia coli. Mol. Cell. Probes 19:195-201.
    • (2005) Mol. Cell. Probes , vol.19 , pp. 195-201
    • Chen, S.1    Zhao, S.2    McDermott, P.F.3    Schroeder, C.M.4    White, D.G.5    Meng, J.6
  • 11
    • 55349108569 scopus 로고    scopus 로고
    • Experimental analysis of oligonucleotidemicroarray design criteria to detect deletions by comparative genomic hybridization
    • Flibotte, S., and D.G. Moerman. 2008. Experimental analysis of oligonucleotidemicroarray design criteria to detect deletions by comparative genomic hybridization. BMC Genomics 9:497-508.
    • (2008) BMC Genomics , vol.9 , pp. 497-508
    • Flibotte, S.1    Moerman, D.G.2
  • 12
    • 0034767750 scopus 로고    scopus 로고
    • Molecular detection of antimicrobial resistance
    • table
    • Fluit, A.C., M.R. Visser, and F.J. Schmitz. 2001. Molecular detection of antimicrobial resistance. Clin. Microbiol. Rev. 14:836-871, table.
    • (2001) Clin. Microbiol. Rev. , vol.14 , pp. 836-871
    • Fluit, A.C.1    Visser, M.R.2    Schmitz, F.J.3
  • 15
    • 25144494269 scopus 로고    scopus 로고
    • Point-of-care molecular diagnostic systems-past, present and future
    • Holland, C.A., and F.L. Kiechle. 2005. Point-of-care molecular diagnostic systems-past, present and future. Curr. Opin. Microbiol. 8:504-509.
    • (2005) Curr. Opin. Microbiol. , vol.8 , pp. 504-509
    • Holland, C.A.1    Kiechle, F.L.2
  • 16
    • 38049000353 scopus 로고    scopus 로고
    • Comparison of antimicrobial resistance genes in nontyphoidal salmonellae of serotypes enteritidis, hadar, and virchow from humans and food-producing animals in England and Wales
    • Hopkins, K.L., M.J. Batchelor, M. Anjum, R.H. Davies, and E.J. Threlfall. 2007. Comparison of antimicrobial resistance genes in nontyphoidal salmonellae of serotypes enteritidis, hadar, and virchow from humans and food-producing animals in England and Wales. Microb. Drug Resist. 13:281-288.
    • (2007) Microb. Drug Resist. , vol.13 , pp. 281-288
    • Hopkins, K.L.1    Batchelor, M.J.2    Anjum, M.3    Davies, R.H.4    Threlfall, E.J.5
  • 17
    • 33644547013 scopus 로고    scopus 로고
    • Molecular understanding of aminoglycoside action and resistance
    • Jana, S., and J.K. Deb. 2006. Molecular understanding of aminoglycoside action and resistance. Appl. Microbiol. Biotechnol. 70:140-150.
    • (2006) Appl. Microbiol. Biotechnol. , vol.70 , pp. 140-150
    • Jana, S.1    Deb, J.K.2
  • 18
    • 0036226603 scopus 로고    scopus 로고
    • BLAT-the BLAST-like alignment tool
    • Kent, W.J. 2002. BLAT-the BLAST-like alignment tool. Genome Res. 12:656-664.
    • (2002) Genome Res. , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 20
    • 0034660261 scopus 로고    scopus 로고
    • Prevalence of the multiple antibiotic resistance operon (marRAB) in the genus Salmonella
    • Kunonga, N.I., R.J. Sobieski, and S.S. Crupper. 2000. Prevalence of the multiple antibiotic resistance operon (marRAB) in the genus Salmonella. FEMS Microbiol. Lett. 187:155-160.
    • (2000) FEMS Microbiol. Lett. , vol.187 , pp. 155-160
    • Kunonga, N.I.1    Sobieski, R.J.2    Crupper, S.S.3
  • 21
    • 0029176724 scopus 로고
    • High-lysine corn as a source of protein and energy for finishing calves
    • Ladely, S.R., R.A. Stock, T.J. Klopfenstein, and M.H. Sindt. 1995. High-lysine corn as a source of protein and energy for finishing calves. J. Anim. Sci. 73:228-235.
    • (1995) J. Anim. Sci. , vol.73 , pp. 228-235
    • Ladely, S.R.1    Stock, R.A.2    Klopfenstein, T.J.3    Sindt, M.H.4
  • 22
    • 24144479441 scopus 로고    scopus 로고
    • Development and evaluation of 16S rDNA microarray for detecting bacterial pathogens in cerebrospinal fluid
    • Liu, Y., J.X. Han, H.Y. Huang, and B. Zhu. 2005. Development and evaluation of 16S rDNA microarray for detecting bacterial pathogens in cerebrospinal fluid. Exp. Biol. Med. (Maywood.) 230:587-591.
    • (2005) Exp. Biol. Med. (Maywood.) , vol.230 , pp. 587-591
    • Liu, Y.1    Han, J.X.2    Huang, H.Y.3    Zhu, B.4
  • 23
    • 3242795952 scopus 로고    scopus 로고
    • Advances in spotted microarray resources for expression profiling
    • Lyons, P. 2003. Advances in spotted microarray resources for expression profiling. Brief. Funct.Genomic. Proteomic. 2:21-30.
    • (2003) Brief. Funct.Genomic. Proteomic. , vol.2 , pp. 21-30
    • Lyons, P.1
  • 24
    • 34447337296 scopus 로고    scopus 로고
    • Detection of antimicrobial resistance genes of pathogenic Salmonella from swine with DNA microarray
    • Ma, M., H. Wang, Y. Yu, D. Zhang, and S. Liu. 2007. Detection of antimicrobial resistance genes of pathogenic Salmonella from swine with DNA microarray. J. Vet. Diagn. Invest. 19:161-167.
    • (2007) J. Vet. Diagn. Invest. , vol.19 , pp. 161-167
    • Ma, M.1    Wang, H.2    Yu, Y.3    Zhang, D.4    Liu, S.5
  • 25
    • 35448953695 scopus 로고    scopus 로고
    • Oligonucleotide microarray for molecular characterization and genotyping of Salmonella spp. strains
    • Majtan, T., L. Majtanova, J. Timko, and V. Majtan. 2007. Oligonucleotide microarray for molecular characterization and genotyping of Salmonella spp. strains. J. Antimicrob. Chemother. 60:937-946.
    • (2007) J. Antimicrob. Chemother. , vol.60 , pp. 937-946
    • Majtan, T.1    Majtanova, L.2    Timko, J.3    Majtan, V.4
  • 26
    • 33845233656 scopus 로고    scopus 로고
    • Molecular characterisation of Salmonella strains by an oligonucleotide multiprobe microarray
    • Malorny, B., C. Bunge, B. Guerra, S. Prietz, and R. Helmuth. 2007. Molecular characterisation of Salmonella strains by an oligonucleotide multiprobe microarray. Mol. Cell. Probes 21:56-65.
    • (2007) Mol. Cell. Probes , vol.21 , pp. 56-65
    • Malorny, B.1    Bunge, C.2    Guerra, B.3    Prietz, S.4    Helmuth, R.5
  • 27
    • 24644447773 scopus 로고    scopus 로고
    • Molecular basis of macrolide resistance in Campylobacter: Role of efflux pumps and target mutations
    • Mamelli, L., V. Prouzet-Mauleon, J.M. Pages, F. Megraud, and J.M. Bolla. 2005. Molecular basis of macrolide resistance in Campylobacter: role of efflux pumps and target mutations. J. Antimicrob. Chemother. 56:491-497.
    • (2005) J. Antimicrob. Chemother. , vol.56 , pp. 491-497
    • Mamelli, L.1    Prouzet-Mauleon, V.2    Pages, J.M.3    Megraud, F.4    Bolla, J.M.5
  • 30
    • 1542723586 scopus 로고    scopus 로고
    • Microarray-based identification of bacteria in clinical samples by solid-phase PCR amplification of 23S ribosomal DNA sequences
    • Mitterer, G., M. Huber, E. Leidinger, C. Kirisits, W. Lubitz, M.W. Mueller, and W.M. Schmidt. 2004. Microarray-based identification of bacteria in clinical samples by solid-phase PCR amplification of 23S ribosomal DNA sequences. J. Clin. Microbiol. 42:1048-1057.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 1048-1057
    • Mitterer, G.1    Huber, M.2    Leidinger, E.3    Kirisits, C.4    Lubitz, W.5    Mueller, M.W.6    Schmidt, W.M.7
  • 31
    • 43149096697 scopus 로고    scopus 로고
    • DNA microarray-based genotyping of methicillin-resistant Staphylococcus aureus strains from Eastern Saxony
    • Monecke, S., L. Jatzwauk, S. Weber, P. Slickers, and R. Ehricht. 2008. DNA microarray-based genotyping of methicillin-resistant Staphylococcus aureus strains from Eastern Saxony. Clin. Microbiol. Infect 14:534-545.
    • (2008) Clin. Microbiol. Infect , vol.14 , pp. 534-545
    • Monecke, S.1    Jatzwauk, L.2    Weber, S.3    Slickers, P.4    Ehricht, R.5
  • 34
    • 0019450043 scopus 로고
    • Ability of Neisseria gonorrhoeae, Neisseria meningitidis, and commensal Neisseria species to obtain iron from transferrin and iron compounds
    • Nickelsen, P.A., and P.F. Sparling. 1981. Ability of Neisseria gonorrhoeae, Neisseria meningitidis, and commensal Neisseria species to obtain iron from transferrin and iron compounds. Infect Immun 33:555-564.
    • (1981) Infect Immun , vol.33 , pp. 555-564
    • Nickelsen, P.A.1    Sparling, P.F.2
  • 35
    • 0043123142 scopus 로고    scopus 로고
    • Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays
    • Nielsen, H.B., R. Wernersson, and S. Knudsen. 2003. Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays. Nucleic Acids Res. 31:3491-3496.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3491-3496
    • Nielsen, H.B.1    Wernersson, R.2    Knudsen, S.3
  • 40
    • 43149117708 scopus 로고    scopus 로고
    • Genotyping of Chlamydophila psittaci using a new DNA microarray assay based on sequence analysis of ompA genes
    • Sachse, K., K. Laroucau, H. Hotzel, E. Schubert, R. Ehricht, and P. Slickers. 2008. Genotyping of Chlamydophila psittaci using a new DNA microarray assay based on sequence analysis of ompA genes. BMC Microbiol. 8:63-74.
    • (2008) BMC Microbiol. , vol.8 , pp. 63-74
    • Sachse, K.1    Laroucau, K.2    Hotzel, H.3    Schubert, E.4    Ehricht, R.5    Slickers, P.6
  • 42
    • 30044448339 scopus 로고    scopus 로고
    • Microarray-based detection of genetic heterogeneity, antimicrobial resistance, and the viable but nonculturable state in human pathogenic Vibrio spp
    • Vora, G.J., C.E. Meador, M.M. Bird, C.A. Bopp, J.D. Andreadis, and D.A. Stenger. 2005. Microarray-based detection of genetic heterogeneity, antimicrobial resistance, and the viable but nonculturable state in human pathogenic Vibrio spp. Proc. Natl. Acad. Sci. U. S. A 102:19109-19114.
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 19109-19114
    • Vora, G.J.1    Meador, C.E.2    Bird, M.M.3    Bopp, C.A.4    Andreadis, J.D.5    Stenger, D.A.6
  • 43
    • 23144447636 scopus 로고    scopus 로고
    • OligoWiz 2.0- integrating sequence feature annotation into the design of microarray probes
    • Wernersson, R., and H.B. Nielsen. 2005. OligoWiz 2.0- integrating sequence feature annotation into the design of microarray probes. Nucleic Acids Res. 33:W611-W615.
    • (2005) Nucleic Acids Res. , vol.33
    • Wernersson, R.1    Nielsen, H.B.2
  • 44
    • 4644268878 scopus 로고    scopus 로고
    • Development and validation of a diagnostic DNA microarray to detect quinolone-resistant Escherichia coli among clinical isolates
    • Yu, X., M. Susa, C. Knabbe, R.D. Schmid, and T.T. Bachmann. 2004. Development and validation of a diagnostic DNA microarray to detect quinolone-resistant Escherichia coli among clinical isolates. J. Clin. Microbiol. 42:4083-4091.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 4083-4091
    • Yu, X.1    Susa, M.2    Knabbe, C.3    Schmid, R.D.4    Bachmann, T.T.5
  • 45
    • 34548472206 scopus 로고    scopus 로고
    • Rapid and sensitive detection of fluoroquinolone- resistant Escherichia coli from urine samples using a genotyping DNA microarray
    • Yu, X., M. Susa, J. Weile, C. Knabbe, R.D. Schmid, and T.T. Bachmann. 2007. Rapid and sensitive detection of fluoroquinolone- resistant Escherichia coli from urine samples using a genotyping DNA microarray. Int. J. Med. Microbiol. 297:417-429.
    • (2007) Int. J. Med. Microbiol. , vol.297 , pp. 417-429
    • Yu, X.1    Susa, M.2    Weile, J.3    Knabbe, C.4    Schmid, R.D.5    Bachmann, T.T.6
  • 46
    • 68849110417 scopus 로고    scopus 로고
    • Microarray analysis of antimicrobial resistance genes in Salmonella enterica from preharvest poultry environment
    • Zou, W., J.G. Frye, C.W. Chang, J. Liu, C.E. Cerniglia, and R. Nayak. 2009. Microarray analysis of antimicrobial resistance genes in Salmonella enterica from preharvest poultry environment. J. Appl. Microbiol. 107:906-914.
    • (2009) J. Appl. Microbiol. , vol.107 , pp. 906-914
    • Zou, W.1    Frye, J.G.2    Chang, C.W.3    Liu, J.4    Cerniglia, C.E.5    Nayak, R.6


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