-
1
-
-
0030801002
-
"Gapped blast and Psi-blast: A New Generation of Protein Database Search Programs"
-
Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller and D. J. Lipman. "Gapped blast and Psi-blast: A New Generation of Protein Database Search Programs". Nucleic Acids Res 25, no. 17 (1997): 3389-402.
-
(1997)
Nucleic Acids Res
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0034749812
-
Vibrio fischeri outer membrane protein OmpU plays a role in normal symbiotic colonization
-
Aekersberg, F., Lupp, C., Feliciano, B., EG Ruby 2001. Vibrio fischeri outer membrane protein OmpU plays a role in normal symbiotic colonization. J Bacteriol. 183(22):6590-7.
-
(2001)
J Bacteriol
, vol.183
, Issue.22
, pp. 6590-6597
-
-
Aekersberg, F.1
Lupp, C.2
Feliciano, B.3
Ruby, E.G.4
-
3
-
-
84886663525
-
Genome sequence analysis indicates that the model eukaryote Nematostella vectensis harbors bacterial consorts
-
Artamonova, II and Mushegian, A.R. (2013) Genome sequence analysis indicates that the model eukaryote Nematostella vectensis harbors bacterial consorts. Appl Environ Microbiol 79(22), 6868-6873.
-
(2013)
Appl Environ Microbiol
, vol.79
, Issue.22
, pp. 6868-6873
-
-
Artamonova, I.I.1
Mushegian, A.R.2
-
4
-
-
40549120596
-
"The Rast Server: Rapid Annotations Using Subsystems Technology"
-
Aziz, R. K., D. Bartels, A. A. Best, M. DeJongh, T. Disz, R. A. Edwards, K. Formsma, S. Gerdes, E. M. Glass, M. Kubal, F. Meyer, G. J. Olsen, R. Olson, A. L. Osterman, R. A. Overbeek, L. K. McNeil, D. Paarmann, T. Paczian, B. Parrello, G. D. Pusch, C. Reich, R. Stevens, O. Vassieva, V. Vonstein, A. Wilke and O. Zagnitko. "The Rast Server: Rapid Annotations Using Subsystems Technology". BMC Genomics 9, (2008): 75.
-
(2008)
BMC Genomics
, vol.9
, pp. 75
-
-
Aziz, R.K.1
Bartels, D.2
Best, A.A.3
DeJongh, M.4
Disz, T.5
Edwards, R.A.6
Formsma, K.7
Gerdes, S.8
Glass, E.M.9
Kubal, M.10
Meyer, F.11
Olsen, G.J.12
Olson, R.13
Osterman, A.L.14
Overbeek, R.A.15
McNeil, L.K.16
Paarmann, D.17
Paczian, T.18
Parrello, B.19
Pusch, G.D.20
Reich, C.21
Stevens, R.22
Vassieva, O.23
Vonstein, V.24
Wilke, A.25
Zagnitko, O.26
more..
-
5
-
-
84876006796
-
Bacteria of the genus Endozoicomonas dominate the microbiome of the Mediterranean gorgonian coral Eunicella cavolini
-
Bayer, T., C. Arif, C. Ferrier-Pages, D. Zoccola, M. Aranda, and C. R. Voolstra. 2013a. Bacteria of the genus Endozoicomonas dominate the microbiome of the Mediterranean gorgonian coral Eunicella cavolini. Marine Ecology Progress Series 479:75-+.
-
(2013)
Marine Ecology Progress Series
, vol.479
, pp. 75
-
-
Bayer, T.1
Arif, C.2
Ferrier-Pages, C.3
Zoccola, D.4
Aranda, M.5
Voolstra, C.R.6
-
6
-
-
84880658726
-
The microbiome of the Red Sea coral Stylophora pistillata is dominated by tissue-associated Endozoicomonas bacteria
-
Bayer, T., M. J. Neave, A. Alsheikh-Hussain, M. Aranda, L. K. Yum, T. Mincer, K. Hughen, A. Apprill, and C. R. Voolstra. 2013b. The microbiome of the Red Sea coral Stylophora pistillata is dominated by tissue-associated Endozoicomonas bacteria. Appl Environ Microbiol 79:4759-4762.
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 4759-4762
-
-
Bayer, T.1
Neave, M.J.2
Alsheikh-Hussain, A.3
Aranda, M.4
Yum, L.K.5
Mincer, T.6
Hughen, K.7
Apprill, A.8
Voolstra, C.R.9
-
7
-
-
0033827577
-
'Additional Evidence That Juvenile Oyster isease Is Caused by a Member of the Roseobacter Group and Colonization of Nonaffected Animals by Stappia Stellulata-Like Strains'
-
Boettcher, K. J., B. J. Barber and J. T. Singer. "Additional Evidence That Juvenile Oyster isease Is Caused by a Member of the Roseobacter Group and Colonization of Nonaffected Animals by Stappia Stellulata-Like Strains". Appl Environ Microbiol 66, no. 9 (2000): 3924-30.
-
(2000)
Appl Environ Microbiol
, vol.66
, Issue.9
, pp. 3924-3930
-
-
Boettcher, K.J.1
Barber, B.J.2
Singer, J.T.3
-
8
-
-
84884520631
-
"Cnidarian-Microbe Interactions and the Origin of Innate Immunity in Metazoans"
-
Bosch, T. C. "Cnidarian-Microbe Interactions and the Origin of Innate Immunity in Metazoans". Annu Rev Microbiol, (2013).
-
(2013)
Annu Rev Microbiol
-
-
Bosch, T.C.1
-
9
-
-
0035656112
-
Diversity of the ring-cleaving dioxygenase gene pcaH in a salt marsh bacterial community
-
Buchan, A., Neidle, E.L. and Moran, M.A. (2001) Diversity of the ring-cleaving dioxygenase gene pcaH in a salt marsh bacterial community. Appl Environ Microbiol 67(12), 5801-5809.
-
(2001)
Appl Environ Microbiol
, vol.67
, Issue.12
, pp. 5801-5809
-
-
Buchan, A.1
Neidle, E.L.2
Moran, M.A.3
-
10
-
-
14744289661
-
The genome of the Pseudomonas aeruginosa generalized transducing bacteriophage F116
-
Byrne, M. and Kropinski, A.M. (2005) The genome of the Pseudomonas aeruginosa generalized transducing bacteriophage F116. Gene 346, 187-194.
-
(2005)
Gene
, vol.346
, pp. 187-194
-
-
Byrne, M.1
Kropinski, A.M.2
-
11
-
-
33845309135
-
Identification of bacteria associated with a disease affecting the marine sponge Ianthella bastain NewBritain, Papua New Guinea
-
Cervino, J.M., Winiarski-Cervino, K.B., Polson, S.W., Goreau, T.J., and Smith, G.W. (2006) Identification of bacteria associated with a disease affecting the marine sponge Ianthella bastain NewBritain, Papua New Guinea. Mar Ecol Prog Ser 324: 139-150.
-
(2006)
Mar Ecol Prog Ser
, vol.324
, pp. 139-150
-
-
Cervino, J.M.1
Winiarski-Cervino, K.B.2
Polson, S.W.3
Goreau, T.J.4
Smith, G.W.5
-
12
-
-
84861904854
-
VFDB 2012 update: toward the genetic diversity and molecular evolution of bacterial virulence factors
-
Chen, L., Xiong, Z., Sun, L., Yang, J. and Jin, Q. (2012) VFDB 2012 update: toward the genetic diversity and molecular evolution of bacterial virulence factors. Nucleic Acids Res 40(Database issue), D641-645.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.DATABASE ISSUE
, pp. D641-D645
-
-
Chen, L.1
Xiong, Z.2
Sun, L.3
Yang, J.4
Jin, Q.5
-
13
-
-
0037251969
-
The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
-
Cole, J.R., Chai, B., Marsh, T.L., Farris, R.J., Wang, Q., Kulam, S.A., Chandra, S., McGarrell, D.M., Schmidt, T.M., Garrity, G.M. and Tiedje, J.M. (2003) The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res. 31(1), 442-443.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.1
, pp. 442-443
-
-
Cole, J.R.1
Chai, B.2
Marsh, T.L.3
Farris, R.J.4
Wang, Q.5
Kulam, S.A.6
Chandra, S.7
McGarrell, D.M.8
Schmidt, T.M.9
Garrity, G.M.10
Tiedje, J.M.11
-
14
-
-
78649868522
-
'Ecosystem-Specific Selection Pressures Revealed through Comparative Population Genomics'
-
Coleman, M. L. and S. W. Chisholm. "Ecosystem-Specific Selection Pressures Revealed through Comparative Population Genomics". Proc Natl Acad Sci U S A 107, no. 43 (2010): 18634-9.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, Issue.43
, pp. 18634-18639
-
-
Coleman, M.L.1
Chisholm, S.W.2
-
15
-
-
84870578736
-
Public good dynamics drive evolution of iron acquisition strategies in natural bacterioplankton populations
-
Cordero, O.X., Ventouras, L.A., DeLong, E.F. and Polz, M.F. (2012) Public good dynamics drive evolution of iron acquisition strategies in natural bacterioplankton populations. Proc Natl Acad Sci U S A 109(49), 20059-20064.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, Issue.49
, pp. 20059-20064
-
-
Cordero, O.X.1
Ventouras, L.A.2
DeLong, E.F.3
Polz, M.F.4
-
17
-
-
0026456449
-
'The Involvement of the Intestinal Microflora in the Expansion of Cd4+ T Cells with a Naive Phenotype in the Periphery'
-
Dobber, R., A. Hertogh-Huijbregts, J. Rozing, K. Bottomly and L. Nagelkerken. "The Involvement of the Intestinal Microflora in the Expansion of Cd4+ T Cells with a Naive Phenotype in the Periphery". Dev Immunol 2, no. 2 (1992): 141-50.
-
(1992)
Dev Immunol
, vol.2
, Issue.2
, pp. 141-150
-
-
Dobber, R.1
Hertogh-Huijbregts, A.2
Rozing, J.3
Bottomly, K.4
Nagelkerken, L.5
-
18
-
-
77953316436
-
Isolation and diversity analysis of heterotrophic bacteria associated with sea anemones
-
Du, Z., Zhang, W., Xia, H., L, G., and Chen, G. (2010) Isolation and diversity analysis of heterotrophic bacteria associated with sea anemones. Acta Oceanologica Sinica 29: 62-69.
-
(2010)
Acta Oceanologica Sinica
, vol.29
, pp. 62-69
-
-
Du, Z.1
Zhang, W.2
Xia, H.L.G.3
Chen, G.4
-
19
-
-
0028052656
-
Concomitant Effects of Sulfide and Hypoxia on the Aerobic Metabolism of the Marine Oligochaete Tubificoides Benedii
-
Dubilier, N., Giere, O. and Grieshaber, M.K. (1994) Concomitant Effects of Sulfide and Hypoxia on the Aerobic Metabolism of the Marine Oligochaete Tubificoides Benedii. Journal of Experimental Zoology 269(4), 287-297.
-
(1994)
Journal of Experimental Zoology
, vol.269
, Issue.4
, pp. 287-297
-
-
Dubilier, N.1
Giere, O.2
Grieshaber, M.K.3
-
20
-
-
52049111640
-
Symbiotic diversity in marine animals: the art of harnessing chemosynthesis
-
Dubilier, N., Bergin, C., and Lott, C. (2008) Symbiotic diversity in marine animals: the art of harnessing chemosynthesis. Nat Rev Microbiol 6: 725-740.
-
(2008)
Nat Rev Microbiol
, vol.6
, pp. 725-740
-
-
Dubilier, N.1
Bergin, C.2
Lott, C.3
-
21
-
-
77951499509
-
The major outer membrane protein OmpU of Vibrio splendidus contributes to host antimicrobial peptide resistance and is required for virulence in the oyster Crassostrea gigas
-
Duperthuy M, et al. The major outer membrane protein OmpU of Vibrio splendidus contributes to host antimicrobial peptide resistance and is required for virulence in the oyster Crassostrea gigas. Environ Microbiol. 2010;12:951-963.
-
(2010)
Environ Microbiol
, vol.12
, pp. 951-963
-
-
Duperthuy, M.1
-
22
-
-
84871367784
-
Biogeography of Rhizobium radiobacter and distribution of associated temperate phages in deep subseafloor sediments
-
Engelhardt, T., Sahlberg, M., Cypionka, H. and B. Engelen. Biogeography of Rhizobium radiobacter and distribution of associated temperate phages in deep subseafloor sediments. The ISME Journal (2013) 7, 199-209.
-
(2013)
The ISME Journal
, vol.7
, pp. 199-209
-
-
Engelhardt, T.1
Sahlberg, M.2
Cypionka, H.3
Engelen, B.4
-
23
-
-
0343240064
-
Asexual Reproduction, Diet and Anomalies of the Anemone Nematostella vectensis in Nova Scotia
-
Frank, P.G. and J.S. Bleakney, Asexual Reproduction, Diet and Anomalies of the Anemone Nematostella vectensis in Nova Scotia. The Canadian Field-Naturalist, 1978. 92: p. 259-263.
-
(1978)
The Canadian Field-Naturalist
, vol.92
, pp. 259-263
-
-
Frank, P.G.1
Bleakney, J.S.2
-
24
-
-
84875371562
-
Bacterial Colonization of Hydra Hatchlings Follows a Robust Temporal Pattern
-
Franzenburg, S., S. Fraune, P. M. Altrock, S. Kunzel, J. F. Baines, A. Traulsen and T. C. Bosch. Bacterial Colonization of Hydra Hatchlings Follows a Robust Temporal Pattern. ISME J 7, no. 4 (2013): 781-90.
-
(2013)
ISME J
, vol.7
, Issue.4
, pp. 781-790
-
-
Franzenburg, S.1
Fraune, S.2
Altrock, P.M.3
Kunzel, S.4
Baines, J.F.5
Traulsen, A.6
Bosch, T.C.7
-
25
-
-
84884654455
-
Distinct antimicrobial peptide expression determines host species-specific bacterial associations
-
Franzenburg, S., Walter, J., Kunzel, S., Wang, J., Baines, J.F., Bosch, T.C. and Fraune, S. (2013) Distinct antimicrobial peptide expression determines host species-specific bacterial associations. Proc Natl Acad Sci U S A 110(39), E3730-3738.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, Issue.39
, pp. E3730-E3738
-
-
Franzenburg, S.1
Walter, J.2
Kunzel, S.3
Wang, J.4
Baines, J.F.5
Bosch, T.C.6
Fraune, S.7
-
26
-
-
78149248987
-
In an Early Branching Metazoan, Bacterial Colonization of the Embryo Is Controlled by Maternal Antimicrobial Peptides
-
Fraune, S., R. Augustin, F. Anton-Erxleben, J. Wittlieb, C. Gelhaus, V. B. Klimovich, M. P. Samoilovich and T. C. Bosch. In an Early Branching Metazoan, Bacterial Colonization of the Embryo Is Controlled by Maternal Antimicrobial Peptides. Proc Natl Acad Sci U S A 107, no. 42 (2010): 18067-72.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, Issue.42
, pp. 18067-18072
-
-
Fraune, S.1
Augustin, R.2
Anton-Erxleben, F.3
Wittlieb, J.4
Gelhaus, C.5
Klimovich, V.B.6
Samoilovich, M.P.7
Bosch, T.C.8
-
27
-
-
34548779029
-
Long-Term Maintenance of Species-Specific Bacterial Microbiota in the Basal Metazoan Hydra
-
Fraune, S. and T. C. Bosch. Long-Term Maintenance of Species-Specific Bacterial Microbiota in the Basal Metazoan Hydra. Proc Natl Acad Sci U S A 104, no. 32 (2007): 13146-51.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, Issue.32
, pp. 13146-13151
-
-
Fraune, S.1
Bosch, T.C.2
-
28
-
-
77954859068
-
Why Bacteria Matter in Animal Development and Evolution
-
Fraune, S. and T. C. Bosch. Why Bacteria Matter in Animal Development and Evolution. Bioessays 32, no. 7 (2010): 571-80.
-
(2010)
Bioessays
, vol.32
, Issue.7
, pp. 571-580
-
-
Fraune, S.1
Bosch, T.C.2
-
29
-
-
0035818523
-
A paradox resolved: sulfide acquisition by roots of seep tubeworms sustains net chemoautotrophy
-
Freytag, J., Girguis, P., Bergquist, D., Andras, J., Childress, J., and Fisher, C. (2001) A paradox resolved: sulfide acquisition by roots of seep tubeworms sustains net chemoautotrophy. Proc Natl Acad Sci USA 98: 13408-13413.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 13408-13413
-
-
Freytag, J.1
Girguis, P.2
Bergquist, D.3
Andras, J.4
Childress, J.5
Fisher, C.6
-
30
-
-
79959338644
-
Complete genome of Pseudomonas mendocina NK-01, which synthesizes medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides
-
Guo, W., Wang, Y., Song, C., Yang, C., Li, Q., Li, B., Su, W., Sun, X., Song, D., Yang, X. and Wang, S. (2011) Complete genome of Pseudomonas mendocina NK-01, which synthesizes medium-chain-length polyhydroxyalkanoates and alginate oligosaccharides. J Bacteriol 193(13), 3413-3414.
-
(2011)
J Bacteriol
, vol.193
, Issue.13
, pp. 3413-3414
-
-
Guo, W.1
Wang, Y.2
Song, C.3
Yang, C.4
Li, Q.5
Li, B.6
Su, W.7
Sun, X.8
Song, D.9
Yang, X.10
Wang, S.11
-
31
-
-
0028160936
-
The Unique, Widely Distributed, Estuarine Sea-Anemone, Nematostella-Vectensis Stephenson-a Review, New Facts, and Questions
-
Hand, C., and Uhlinger, K.R. (1994) The Unique, Widely Distributed, Estuarine Sea-Anemone, Nematostella-Vectensis Stephenson-a Review, New Facts, and Questions. Estuaries 17: 501-508.
-
(1994)
Estuaries
, vol.17
, pp. 501-508
-
-
Hand, C.1
Uhlinger, K.R.2
-
32
-
-
84938943452
-
"Introducing the starlet sea anemone Nematostella vectensis as a model for investigating microbial mediation of health and disease in hexacorals"
-
Cambridge, MA, Massachusetts Institute of Technology
-
Har, J. Y. "Introducing the starlet sea anemone Nematostella vectensis as a model for investigating microbial mediation of health and disease in hexacorals". Civil and Environmental Engineering. Cambridge, MA, Massachusetts Institute of Technology (2009): 115. http://hdl.handle.net/1721.1/51615.
-
(2009)
Civil and Environmental Engineering
, pp. 115
-
-
Har, J.Y.1
-
33
-
-
84880747816
-
Global transcriptional responses of the toxic cyanobacterium, Microcystis aeruginosa, to nitrogen stress, phosphorus stress, and growth on organic matter
-
Harke, M.J. and Gobler, C.J. (2013) Global transcriptional responses of the toxic cyanobacterium, Microcystis aeruginosa, to nitrogen stress, phosphorus stress, and growth on organic matter. PLoS ONE 8(7), e69834.
-
(2013)
PLoS ONE
, vol.8
, Issue.7
-
-
Harke, M.J.1
Gobler, C.J.2
-
34
-
-
77957689489
-
Validation of two ribosomal RNA removal methods for microbial metatranscriptomics
-
He, S., Wurtzel, O., Singh, K., Froula, J.L., Yilmaz, S., Tringe, S.G., Wang, Z., Chen, F., Lindquist, A., Sorek, R. and Hugenholtz, P. (2010) Validation of two ribosomal RNA removal methods for microbial metatranscriptomics. Nat Methods 7(10), 807-812.
-
(2010)
Nat Methods
, vol.7
, Issue.10
, pp. 807-812
-
-
He, S.1
Wurtzel, O.2
Singh, K.3
Froula, J.L.4
Yilmaz, S.5
Tringe, S.G.6
Wang, Z.7
Chen, F.8
Lindquist, A.9
Sorek, R.10
Hugenholtz, P.11
-
35
-
-
84858864044
-
'The Activity Level of a Microbial Community Function Can Be Predicted from Its Metatranscriptome'
-
Helbling, D. E., M. Ackermann, K. Fenner, H. P. Kohler and D. R. Johnson. "The Activity Level of a Microbial Community Function Can Be Predicted from Its Metatranscriptome". ISME J 6, no. 4 (2012): 902-4.
-
(2012)
ISME J
, vol.6
, Issue.4
, pp. 902-904
-
-
Helbling, D.E.1
Ackermann, M.2
Fenner, K.3
Kohler, H.P.4
Johnson, D.R.5
-
36
-
-
84988146086
-
Effects of sampling technique on measurements of porewater constituents in salt marsh sediments
-
Howes, B., JWH, D. and Wakeham, S. (1985) Effects of sampling technique on measurements of porewater constituents in salt marsh sediments. Limnology and ceanography 30(1), 221-227.
-
(1985)
Limnology and ceanography
, vol.30
, Issue.1
, pp. 221-227
-
-
Howes, B.1
Dacey, J.W.H.2
Wakeham, S.3
-
37
-
-
33847702910
-
Megan Analysis of Metagenomic Data
-
Huson, D. H., A. F. Auch, J. Qi and S. C. Schuster. Megan Analysis of Metagenomic Data. Genome Res 17, no. 3 (2007): 377-86.
-
(2007)
Genome Res
, vol.17
, Issue.3
, pp. 377-386
-
-
Huson, D.H.1
Auch, A.F.2
Qi, J.3
Schuster, S.C.4
-
38
-
-
5444247841
-
Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the {epsilon}-Proteobacteria isolated from Okinawa Trough hydrothermal sediments
-
Inagaki, F., Takai, K., Nealson, K., and Horikoshi, K. (2004) Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the {epsilon}-Proteobacteria isolated from Okinawa Trough hydrothermal sediments. International Journal of Systematic and Evolutionary Microbiology 54: 1477.
-
(2004)
International Journal of Systematic and Evolutionary Microbiology
, vol.54
, pp. 1477
-
-
Inagaki, F.1
Takai, K.2
Nealson, K.3
Horikoshi, K.4
-
39
-
-
64749102782
-
Culture-independent characterization of bacterial communities associated with the cold-water coral Lophelia pertusa in the northeastern Gulf of Mexico
-
Kellogg, C., Lisle, J., and Galkiewicz, J. (2009) Culture-independent characterization of bacterial communities associated with the cold-water coral Lophelia pertusa in the northeastern Gulf of Mexico. Applied and environmental microbiology 75: 2294.
-
(2009)
Applied and environmental microbiology
, vol.75
, pp. 2294
-
-
Kellogg, C.1
Lisle, J.2
Galkiewicz, J.3
-
40
-
-
84857108684
-
Black reefs: iron-induced phase shifts on coral reefs
-
Kelly, L.W., Barott, K.L., Dinsdale, E., Friedlander, A.M., Nosrat, B., Obura, D., Sala, E., Sandin, S.A., Smith, J.E., Vermeij, M.J.A., Williams, G.J., Willner, D. and Rohwer, F. (2012) Black reefs: iron-induced phase shifts on coral reefs. Isme Journal 6(3), 638-649.
-
(2012)
Isme Journal
, vol.6
, Issue.3
, pp. 638-649
-
-
Kelly, L.W.1
Barott, K.L.2
Dinsdale, E.3
Friedlander, A.M.4
Nosrat, B.5
Obura, D.6
Sala, E.7
Sandin, S.A.8
Smith, J.E.9
Vermeij, M.J.A.10
Williams, G.J.11
Willner, D.12
Rohwer, F.13
-
41
-
-
84879526050
-
Polyester synthesis genes associated with stress resistance are involved in an insect-bacterium symbiosis
-
Kim, J.K., Won, Y.J., Nikoh, N., Nakayama, H., Han, S.H., Kikuchi, Y., Rhee, Y.H., Park, H.Y., Kwon, J.Y., Kurokawa, K., Dohmae, N., Fukatsu, T. and Lee, B.L. (2013) Polyester synthesis genes associated with stress resistance are involved in an insect-bacterium symbiosis. Proceedings of the National Academy of Sciences of the United States of America 110(26), E2381-E2389.
-
(2013)
Proceedings of the National Academy of Sciences of the United States of America
, vol.110
, Issue.26
, pp. E2381-E2389
-
-
Kim, J.K.1
Won, Y.J.2
Nikoh, N.3
Nakayama, H.4
Han, S.H.5
Kikuchi, Y.6
Rhee, Y.H.7
Park, H.Y.8
Kwon, J.Y.9
Kurokawa, K.10
Dohmae, N.11
Fukatsu, T.12
Lee, B.L.13
-
42
-
-
0029857719
-
Chemoautotrophic symbiosis in the tropical clam Solemya occidentalis (Bivalvia: Protobranchia): Ultrastructural and phylogenetic analysis
-
Krueger, D.M., Dubilier, N. and Cavanaugh, C.M. (1996) Chemoautotrophic symbiosis in the tropical clam Solemya occidentalis (Bivalvia: Protobranchia): Ultrastructural and phylogenetic analysis. Marine Biology 126(1), 55-64.
-
(1996)
Marine Biology
, vol.126
, Issue.1
, pp. 55-64
-
-
Krueger, D.M.1
Dubilier, N.2
Cavanaugh, C.M.3
-
43
-
-
33947273040
-
Endozoicomonas elysicola gen. nov., sp. nov., a [gamma]-proteobacterium isolated from the sea slug Elysia ornata
-
Kurahashi, M., and Yokota, A. (2007) Endozoicomonas elysicola gen. nov., sp. nov., a [gamma]-proteobacterium isolated from the sea slug Elysia ornata. Systematic and applied microbiology 30: 202-206.
-
(2007)
Systematic and applied microbiology
, vol.30
, pp. 202-206
-
-
Kurahashi, M.1
Yokota, A.2
-
44
-
-
84861147744
-
Corals form characteristic associations with symbiotic nitrogen-fixing bacteria
-
Lema K. A., Willis B. L., Bourne D. G. (2012). Corals form characteristic associations with symbiotic nitrogen-fixing bacteria. Appl. Environ. Microbiol. 78, 3136-3144.
-
(2012)
Appl. Environ. Microbiol
, vol.78
, pp. 3136-3144
-
-
Lema, K.A.1
Willis B.L.Bourne, D.G.2
-
45
-
-
46249085739
-
'Evolution of Mammals and Their Gut Microbes'
-
Ley, R. E., M. Hamady, C. Lozupone, P. J. Turnbaugh, R. R. Ramey, J. S. Bircher, M. L. Schlegel, T. A. Tucker, M. D. Schrenzel, R. Knight and J. I. Gordon. "Evolution of Mammals and Their Gut Microbes". Science 320, no. 5883 (2008): 1647-51.
-
(2008)
Science
, vol.320
, Issue.5883
, pp. 1647-1651
-
-
Ley, R.E.1
Hamady, M.2
Lozupone, C.3
Turnbaugh, P.J.4
Ramey, R.R.5
Bircher, J.S.6
Schlegel, M.L.7
Tucker, T.A.8
Schrenzel, M.D.9
Knight, R.10
Gordon, J.I.11
-
46
-
-
79951590879
-
Limnobacter litoralis sp. nov., a thiosulfate-oxidizing, heterotrophic bacterium isolated from a volcanic deposit, and emended description of the genus Limnobacter
-
Lu, H., Sato, Y., Fujimura, R., Nishizawa, T., Kamijo, T. and Ohta, H. (2011) Limnobacter litoralis sp. nov., a thiosulfate-oxidizing, heterotrophic bacterium isolated from a volcanic deposit, and emended description of the genus Limnobacter. Int J Syst Evol Microbiol 61(Pt 2), 404-407.
-
(2011)
Int J Syst Evol Microbiol
, vol.61
, pp. 404-407
-
-
Lu, H.1
Sato, Y.2
Fujimura, R.3
Nishizawa, T.4
Kamijo, T.5
Ohta, H.6
-
47
-
-
0035318078
-
Phylogenetic diversity of bacterial and archaeal communities in the anoxic zone of the Cariaco Basin
-
Madrid, V., Taylor, G., Scranton, M., and Chistoserdov, A. (2001) Phylogenetic diversity of bacterial and archaeal communities in the anoxic zone of the Cariaco Basin. Applied and environmental microbiology 67: 1663.
-
(2001)
Applied and environmental microbiology
, vol.67
, pp. 1663
-
-
Madrid, V.1
Taylor, G.2
Scranton, M.3
Chistoserdov, A.4
-
48
-
-
65249149643
-
'Characterizing a Model Human Gut Microbiota Composed of Members of Its Two Dominant Bacterial Phyla'
-
Mahowald, M. A., F. E. Rey, H. Seedorf, P. J. Turnbaugh, R. S. Fulton, A. Wollam, N. Shah, C. Wang, V. Magrini, R. K. Wilson, B. L. Cantarel, P. M. Coutinho, B. Henrissat, L. W. Crock, A. Russell, N. C. Verberkmoes, R. L. Hettich and J. I. Gordon. "Characterizing a Model Human Gut Microbiota Composed of Members of Its Two Dominant Bacterial Phyla". Proc Natl Acad Sci U S A 106, no. 14 (2009): 5859-64.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, Issue.14
, pp. 5859-5864
-
-
Mahowald, M.A.1
Rey, F.E.2
Seedorf, H.3
Turnbaugh, P.J.4
Fulton, R.S.5
Wollam, A.6
Shah, N.7
Wang, C.8
Magrini, V.9
Wilson, R.K.10
Cantarel, B.L.11
Coutinho, P.M.12
Henrissat, B.13
Crock, L.W.14
Russell, A.15
Verberkmoes, N.C.16
Hettich, R.L.17
Gordon, J.I.18
-
49
-
-
85013713024
-
-
Meyer, F., D. Paarmann, M. D'Souza, R. Olson, E. M. Glass, M. Kubal, T. Paczian, A. Rodriguez, R. Stevens, A. Wilke, J. Wilkening and R. A. Edwards. "The Metagenomics Rast Server-a.
-
"The Metagenomics Rast Server-a
-
-
Meyer, F.1
Paarmann, D.2
D'Souza, M.3
Olson, R.4
Glass, E.M.5
Kubal, M.6
Paczian, T.7
Rodriguez, A.8
Stevens, R.9
Wilke, A.10
Wilkening, J.11
Edwards, R.A.12
-
50
-
-
24644453461
-
'Cnidarians and Ancestral Genetic Complexity in the Animal Kingdom'
-
Miller, D. J., E. E. Ball and U. Technau. "Cnidarians and Ancestral Genetic Complexity in the Animal Kingdom". Trends Genet 21, no. 10 (2005): 536-9.
-
(2005)
Trends Genet
, vol.21
, Issue.10
, pp. 536-539
-
-
Miller, D.J.1
Ball, E.E.2
Technau, U.3
-
51
-
-
84925089447
-
Natural volcanic CO2 seeps reveal future trajectories for host-microbial associations in corals and sponges
-
Morrow, K. M., D. G. Bourne, C. Humphrey, E. S. Botte, P. Laffy, J. Zaneveld, S. Uthicke, K. E. Fabricius, and N. S. Webster. 2014. Natural volcanic CO2 seeps reveal future trajectories for host-microbial associations in corals and sponges. ISME J advance online publication doi:10.1038/ismej.2014.188.
-
(2014)
ISME J advance online publication
-
-
Morrow, K.M.1
Bourne, D.G.2
Humphrey, C.3
Botte, E.S.4
Laffy, P.5
Zaneveld, J.6
Uthicke, S.7
Fabricius, K.E.8
Webster, N.S.9
-
52
-
-
85003758655
-
Whole-Genome Sequences of Three Symbiotic Endozoicomonas Bacteria
-
Neave, M., C. Michell, A. Apprill, and C. R. Voolstra. 2014. Whole-Genome Sequences of Three Symbiotic Endozoicomonas Bacteria. Genome Announc 2:e00802-00814.
-
(2014)
Genome Announc
, vol.2
-
-
Neave, M.1
Michell, C.2
Apprill, A.3
Voolstra, C.R.4
-
53
-
-
33745594044
-
'The Gut Flora as a Forgotten Organ'
-
O'Hara, A. M. and F. Shanahan. "The Gut Flora as a Forgotten Organ". EMBO Rep 7, no. 7 (2006): 688-93.
-
(2006)
EMBO Rep
, vol.7
, Issue.7
, pp. 688-693
-
-
O'Hara, A.M.1
Shanahan, F.2
-
54
-
-
78649978358
-
'Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities'
-
Ochman, H., M. Worobey, C. H. Kuo, J. B. Ndjango, M. Peeters, B. H. Hahn and P. Hugenholtz. "Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities". PLoS Biol 8, no. 11 (2010): e1000546.
-
(2010)
PLoS Biol
, vol.8
, Issue.11
-
-
Ochman, H.1
Worobey, M.2
Kuo, C.H.3
Ndjango, J.B.4
Peeters, M.5
Hahn, B.H.6
Hugenholtz, P.7
-
55
-
-
84906943195
-
Secondary metabolite gene expression and interplay of bacterial functions in a tropical freshwater cyanobacterial bloom
-
2014 Mar 20
-
Penn, K., Wang, J., Fernando, S.C. and Thompson, J.R. (2014) Secondary metabolite gene expression and interplay of bacterial functions in a tropical freshwater cyanobacterial bloom. ISME J. 2014 Mar 20. doi: 10.1038/ismej.2014.27.
-
(2014)
ISME J
-
-
Penn, K.1
Wang, J.2
Fernando, S.C.3
Thompson, J.R.4
-
56
-
-
84887104387
-
Description of Endozoicomonas euniceicola sp nov and Endozoicomonas gorgoniicola sp nov., bacteria isolated from the octocorals Eunicea fusca and Plexaura sp., and an emended description of the genus Endozoicomonas
-
Pike, R. E., B. Haltli, and R. G. Kerr. 2013. Description of Endozoicomonas euniceicola sp nov and Endozoicomonas gorgoniicola sp nov., bacteria isolated from the octocorals Eunicea fusca and Plexaura sp., and an emended description of the genus Endozoicomonas. Int J Syst Evol Microbiol 63:4294-4302.
-
(2013)
Int J Syst Evol Microbiol
, vol.63
, pp. 4294-4302
-
-
Pike, R.E.1
Haltli, B.2
Kerr, R.G.3
-
57
-
-
84861203603
-
'Eggnog V3.0: Orthologous Groups Covering 1133 Organisms at 41 Different Taxonomic Ranges'
-
Powell, S., D. Szklarczyk, K. Trachana, A. Roth, M. Kuhn, J. Muller, R. Arnold, T. Rattei, I. Letunic, T. Doerks, L. J. Jensen, C. von Mering and P. Bork. "Eggnog V3.0: Orthologous Groups Covering 1133 Organisms at 41 Different Taxonomic Ranges". Nucleic Acids Res 40, no. Database issue (2012): D284-9.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.DATABASE ISSUE
, pp. D284-D289
-
-
Powell, S.1
Szklarczyk, D.2
Trachana, K.3
Roth, A.4
Kuhn, M.5
Muller, J.6
Arnold, R.7
Rattei, T.8
Letunic, I.9
Doerks, T.10
Jensen C.von Mering, L.J.11
Bork, P.12
-
58
-
-
0034730163
-
Altered expression of the ToxR-regulated porins OmpU and OmpT diminishes Vibrio cholerae bile resistance, virulence factor expression, and intestinal colonization
-
USA, 10220-10224
-
Provenzano and Klose, 2000 Altered expression of the ToxR-regulated porins OmpU and OmpT diminishes Vibrio cholerae bile resistance, virulence factor expression, and intestinal colonization. Proc. Natl. Acad. Sci. USA, 10220-10224 vol. 97 u no. 18.
-
(2000)
Proc. Natl. Acad. Sci.
, vol.97
, Issue.18
-
-
Provenzano1
Klose2
-
59
-
-
84864134721
-
SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes
-
Pruesse, E, Peplies, J and Glöckner, FO (2012) SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes. Bioinformatics, 28, 1823-1829.
-
(2012)
Bioinformatics
, vol.28
, pp. 1823-1829
-
-
Pruesse, E.1
Peplies, J.2
Glöckner, F.O.3
-
60
-
-
53549118607
-
Public Resource for the Automatic Phylogenetic and Functional Analysis of Metagenomes
-
Public Resource for the Automatic Phylogenetic and Functional Analysis of Metagenomes". BMC Bioinformatics 9, (2008): 386.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 386
-
-
-
61
-
-
34447300950
-
'Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization'
-
Putnam, N. H., M. Srivastava, U. Hellsten, B. Dirks, J. Chapman, A. Salamov, A. Terry, H. Shapiro, E. Lindquist, V. V. Kapitonov, J. Jurka, G. Genikhovich, I. V. Grigoriev, S. M. Lucas, R. E. Steele, J. R. Finnerty, U. Technau, M. Q. Martindale and D. S. Rokhsar. "Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization". Science 317, no. 5834 (2007): 86-94.
-
(2007)
Science
, vol.317
, Issue.5834
, pp. 86-94
-
-
Putnam, N.H.1
Srivastava, M.2
Hellsten, U.3
Dirks, B.4
Chapman, J.5
Salamov, A.6
Terry, A.7
Shapiro, H.8
Lindquist, E.9
Kapitonov, V.V.10
Jurka, J.11
Genikhovich, G.12
Grigoriev, I.V.13
Lucas, S.M.14
Steele, R.E.15
Finnerty, J.R.16
Technau, U.17
Martindale, M.Q.18
Rokhsar, D.S.19
-
62
-
-
84873739311
-
'The Silva Ribosomal Rna Gene Database Project: Improved Data Processing and Web-Based Tools'
-
Quast, C., E. Pruesse, P. Yilmaz, J. Gerken, T. Schweer, P. Yarza, J. Peplies and F. O. Glockner. "The Silva Ribosomal Rna Gene Database Project: Improved Data Processing and Web-Based Tools". Nucleic Acids Res 41, no. Database issue (2013): D590-6.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.DATABASE ISSUE
, pp. D590-D596
-
-
Quast, C.1
Pruesse, E.2
Yilmaz, P.3
Gerken, J.4
Schweer, T.5
Yarza, P.6
Peplies, J.7
Glockner, F.O.8
-
63
-
-
84859945291
-
'Metatranscriptomics of the Marine Sponge Geodia Barretti: Tackling Phylogeny and Function of Its Microbial Community'
-
Radax, R., T. Rattei, A. Lanzen, C. Bayer, H. T. Rapp, T. Urich and C. Schleper. "Metatranscriptomics of the Marine Sponge Geodia Barretti: Tackling Phylogeny and Function of Its Microbial Community". Environ Microbiol 14, no. 5 (2012): 1308-24.
-
(2012)
Environ Microbiol
, vol.14
, Issue.5
, pp. 1308-1324
-
-
Radax, R.1
Rattei, T.2
Lanzen, A.3
Bayer, C.4
Rapp, H.T.5
Urich, T.6
Schleper, C.7
-
64
-
-
84866402357
-
'Host/Microbe Interactions Revealed through "Omics" in the Symbiosis between the Hawaiian Bobtail Squid Euprymna Scolopes and the Bioluminescent Bacterium Vibrio Fischeri'
-
Rader, B. A. and S. V. Nyholm. "Host/Microbe Interactions Revealed through "Omics" in the Symbiosis between the Hawaiian Bobtail Squid Euprymna Scolopes and the Bioluminescent Bacterium Vibrio Fischeri". Biol Bull 223, no. 1 (2012): 103-11.
-
(2012)
Biol Bull
, vol.223
, Issue.1
, pp. 103-111
-
-
Rader, B.A.1
Nyholm, S.V.2
-
65
-
-
66249145391
-
Coral-associated bacteria and their role in the biogeochemical cycling of sulfur
-
Raina J. B., Tapiolas D., Willis B. L., Bourne D. G. (2009). Coral-associated bacteria and their role in the biogeochemical cycling of sulfur. Appl. Environ. Microbiol. 75, 3492-3501. 10.1128/AEM.02567-08.
-
(2009)
Appl. Environ. Microbiol
, vol.75
, pp. 3492-3501
-
-
Raina, J.B.1
Tapiolas, D.2
Willis, B.L.3
Bourne, D.G.4
-
66
-
-
33749997498
-
'Reciprocal Gut Microbiota Transplants from Zebrafish and Mice to Germ-Free Recipients Reveal Host Habitat Selection'
-
Rawls, J. F., M. A. Mahowald, R. E. Ley and J. I. Gordon. "Reciprocal Gut Microbiota Transplants from Zebrafish and Mice to Germ-Free Recipients Reveal Host Habitat Selection". Cell 127, no. 2 (2006): 423-33.
-
(2006)
Cell
, vol.127
, Issue.2
, pp. 423-433
-
-
Rawls, J.F.1
Mahowald, M.A.2
Ley, R.E.3
Gordon, J.I.4
-
67
-
-
1842532897
-
'Gnotobiotic Zebrafish Reveal Evolutionarily Conserved Responses to the Gut Microbiota'
-
Rawls, J. F., B. S. Samuel and J. I. Gordon. "Gnotobiotic Zebrafish Reveal Evolutionarily Conserved Responses to the Gut Microbiota". Proc Natl Acad Sci U S A 101, no. 13 (2004): 4596-601.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, Issue.13
, pp. 4596-4601
-
-
Rawls, J.F.1
Samuel, B.S.2
Gordon, J.I.3
-
68
-
-
84879378969
-
Physiological and developmental responses to temperature by the sea anemone Nematostella vectensis
-
Reitzel AM, Chu T, Edquist S, Genovese C, Church C, Tarrant AM, Finnerty JR (2013) Physiological and developmental responses to temperature by the sea anemone Nematostella vectensis. Mar Ecol Prog Ser 484:115-130.
-
(2013)
Mar Ecol Prog Ser
, vol.484
, pp. 115-130
-
-
Reitzel, A.M.1
Chu, T.2
Edquist, S.3
Genovese, C.4
Church, C.5
Tarrant, A.M.6
Finnerty, J.R.7
-
69
-
-
84855790551
-
'Establishing a Model Organism: A Report from the First Annual Nematostella Meeting'
-
Reitzel, A. M., J. F. Ryan and A. M. Tarrant. "Establishing a Model Organism: A Report from the First Annual Nematostella Meeting". Bioessays 34, no. 2 (2012): 158-61.
-
(2012)
Bioessays
, vol.34
, Issue.2
, pp. 158-161
-
-
Reitzel, A.M.1
Ryan, J.F.2
Tarrant, A.M.3
-
70
-
-
76249113998
-
'A Muscle-Specific Transgenic Reporter Line of the Sea Anemone, Nematostella Vectensis'
-
Renfer, E., A. Amon-Hassenzahl, P. R. Steinmetz and U. Technau. "A Muscle-Specific Transgenic Reporter Line of the Sea Anemone, Nematostella Vectensis". Proc Natl Acad Sci USA 107, no. 1 (2010): 104-8.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.1
, pp. 104-108
-
-
Renfer, E.1
Amon-Hassenzahl, A.2
Steinmetz, P.R.3
Technau, U.4
-
71
-
-
33750914850
-
'The Coral Probiotic Hypothesis'
-
Reshef, L., O. Koren, Y. Loya, I. Zilber-Rosenberg and E. Rosenberg. "The Coral Probiotic Hypothesis". Environ Microbiol 8, no. 12 (2006): 2068-73.
-
(2006)
Environ Microbiol
, vol.8
, Issue.12
, pp. 2068-2073
-
-
Reshef, L.1
Koren, O.2
Loya, Y.3
Zilber-Rosenberg, I.4
Rosenberg, E.5
-
72
-
-
54449088402
-
Response of the symbiotic cnidarian Anthopleura elegantissima transcriptome to temperature and UV increase
-
Richier, S., Rodriguez-Lanetty, M., Schnitzler, C. E., and Weis, V. M. 2008. Response of the symbiotic cnidarian Anthopleura elegantissima transcriptome to temperature and UV increase. Comparative Biochemistry and Physiology Part D: Genomics and Proteomics 3 (4):283-289.
-
(2008)
Comparative Biochemistry and Physiology Part D: Genomics and Proteomics
, vol.3
, Issue.4
, pp. 283-289
-
-
Richier, S.1
Rodriguez-Lanetty, M.2
Schnitzler, C.E.3
Weis, V.M.4
-
73
-
-
77955603295
-
'Unlocking Short Read Sequencing for Metagenomics'
-
Rodrigue, S., A. C. Materna, S. C. Timberlake, M. C. Blackburn, R. R. Malmstrom, E. J. Alm and S. W. Chisholm. "Unlocking Short Read Sequencing for Metagenomics". PLoS One 5, no. 7 (2010): e11840.
-
(2010)
PLoS One
, vol.5
, Issue.7
-
-
Rodrigue, S.1
Materna, A.C.2
Timberlake, S.C.3
Blackburn, M.C.4
Malmstrom, R.R.5
Alm, E.J.6
Chisholm, S.W.7
-
74
-
-
38949153861
-
'Innate Immune Homeostasis by the Homeobox Gene Caudal and Commensal-Gut Mutualism in Drosophila'
-
Ryu, J. H., S. H. Kim, H. Y. Lee, J. Y. Bai, Y. D. Nam, J. W. Bae, D. G. Lee, S. C. Shin, E. M. Ha and W. J. Lee. "Innate Immune Homeostasis by the Homeobox Gene Caudal and Commensal-Gut Mutualism in Drosophila". Science 319, no. 5864 (2008): 777-82.
-
(2008)
Science
, vol.319
, Issue.5864
, pp. 777-782
-
-
Ryu, J.H.1
Kim, S.H.2
Lee, H.Y.3
Bai, J.Y.4
Nam, Y.D.5
Bae, J.W.6
Lee, D.G.7
Shin, S.C.8
Ha, E.M.9
Lee, W.J.10
-
75
-
-
77952973291
-
Pseudomonas oleovorans subs. lubricantis subsp. nov., and reclassification of Pseudomonas pseudoalcaligenes ATCC 17440T as later synonym of Pseudomonas oleovorans ATCC 8062 T
-
Apr
-
Saha R, Spröer C, Beck B, Bagley S. Pseudomonas oleovorans subsp. lubricantis subsp. nov., and reclassification of Pseudomonas pseudoalcaligenes ATCC 17440T as later synonym of Pseudomonas oleovorans ATCC 8062 T. Curr Microbiol. 2010 Apr;60(4):294-300. doi: 10.1007/s00284-009-9540-6.
-
(2010)
Curr Microbiol
, vol.60
, Issue.4
, pp. 294-300
-
-
Saha, R.1
Spröer, C.2
Beck, B.3
Bagley, S.4
-
76
-
-
42049108725
-
Bacterial aggregates in the tentacles of the sea anemone Metridium senile
-
Schuett, C., Doepke, H., Grathoff, A., and Gedde, M. (2007) Bacterial aggregates in the tentacles of the sea anemone Metridium senile. Helgoland Marine Research 61: 211-216.
-
(2007)
Helgoland Marine Research
, vol.61
, pp. 211-216
-
-
Schuett, C.1
Doepke, H.2
Grathoff, A.3
Gedde, M.4
-
77
-
-
33748785148
-
Microbial communities in the surface mucopolysaccharide layer and the black band microbial mat of black band-diseased Siderastrea siderea
-
Sep
-
Sekar R, Mills DK, Remily ER, Voss JD, Richardson LL. Microbial communities in the surface mucopolysaccharide layer and the black band microbial mat of black band-diseased Siderastrea siderea. Appl Environ Microbiol. 2006 Sep;72(9):5963-73.
-
(2006)
Appl Environ Microbiol
, vol.72
, Issue.9
, pp. 5963-5973
-
-
Sekar, R.1
Mills, D.K.2
Remily, E.R.3
Voss, J.D.4
Richardson, L.L.5
-
78
-
-
0034928451
-
Limnobacter thiooxidans gen. nov., sp. nov., a novel thiosulfate-oxidizing bacterium isolated from freshwater lake sediment
-
Spring, S., Kampfer, P. and Schleifer, K.H. (2001) Limnobacter thiooxidans gen. nov., sp. nov., a novel thiosulfate-oxidizing bacterium isolated from freshwater lake sediment. Int J SystEvol Microbiol 51(Pt4), 1463-1470.
-
(2001)
Int J SystEvol Microbiol
, vol.51
, Issue.PART4
, pp. 1463-1470
-
-
Spring, S.1
Kampfer, P.2
Schleifer, K.H.3
-
79
-
-
33745482592
-
Reverse transcription using random pentadecamer primers increases yield and quality of resulting cDNA
-
Stangegaard, M., Dufva, I., and Dufva, M. (2006) Reverse transcription using random pentadecamer primers increases yield and quality of resulting cDNA. BioTechniques 40: 649.
-
(2006)
BioTechniques
, vol.40
, pp. 649
-
-
Stangegaard, M.1
Dufva, I.2
Dufva, M.3
-
80
-
-
40649111872
-
'Enzymes of the Shikimic Acid Pathway Encoded in the Genome of a Basal Metazoan, Nematostella Vectensis, Have Microbial Origins'
-
Starcevic, A., S. Akthar, W. C. Dunlap, J. M. Shick, D. Hranueli, J. Cullum and P. F. Long. "Enzymes of the Shikimic Acid Pathway Encoded in the Genome of a Basal Metazoan, Nematostella Vectensis, Have Microbial Origins". Proc Natl Acad Sci U S A 105, no. 7 (2008): 2533-7.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, Issue.7
, pp. 2533-2537
-
-
Starcevic, A.1
Akthar, S.2
Dunlap, W.C.3
Shick, J.M.4
Hranueli, D.5
Cullum, J.6
Long, P.F.7
-
81
-
-
84877055610
-
'Collecting, Rearing, Spawning and Inducing Regeneration of the Starlet Sea Anemone, Nematostella Vectensis'
-
Stefanik, D. J., L. E. Friedman and J. R. Finnerty. "Collecting, Rearing, Spawning and Inducing Regeneration of the Starlet Sea Anemone, Nematostella Vectensis". Nat Protoc 8, no. 5 (2013): 916-23.
-
(2013)
Nat Protoc
, vol.8
, Issue.5
, pp. 916-923
-
-
Stefanik, D.J.1
Friedman, L.E.2
Finnerty, J.R.3
-
82
-
-
77954086440
-
'Development and Quantitative Analyses of a Universal Rrna-Subtraction Protocol for Microbial Metatranscriptomics'
-
Stewart, F. J., E. A. Ottesen and E. F. DeLong. "Development and Quantitative Analyses of a Universal Rrna-Subtraction Protocol for Microbial Metatranscriptomics". ISME J 4, no. 7 (2010): 896-907.
-
(2010)
ISME J
, vol.4
, Issue.7
, pp. 896-907
-
-
Stewart, F.J.1
Ottesen, E.A.2
DeLong, E.F.3
-
83
-
-
77949674527
-
Threatened corals provide underexplored microbial habitats
-
Sunagawa, S., Woodley, C., and Medina, M. (2010) Threatened corals provide underexplored microbial habitats. PLoS ONE 5: E9554.
-
(2010)
PLoS ONE
, vol.5
, pp. E9554
-
-
Sunagawa, S.1
Woodley, C.2
Medina, M.3
-
84
-
-
67349105701
-
Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata
-
Sunagawa, S., DeSantis, T., Piceno, Y., Brodie, E., DeSalvo, M., Voolstra, C. et al. (2009) Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata. The ISME Journal 3: 512-521.
-
(2009)
The ISME Journal
, vol.3
, pp. 512-521
-
-
Sunagawa, S.1
DeSantis, T.2
Piceno, Y.3
Brodie, E.4
DeSalvo, M.5
Voolstra, C.6
-
85
-
-
36549000721
-
'Metagenomic and Functional Analysis of Hindgut Microbiota of a Wood-Feeding Higher Termite'
-
Warnecke, F., P. Luginbuhl, N. Ivanova, M. Ghassemian, T. H. Richardson, J. T. Stege, M. Cayouette, A. C. McHardy, G. Djordjevic, N. Aboushadi, R. Sorek, S. G. Tringe, M. Podar, H. G. Martin, V. Kunin, D. Dalevi, J. Madejska, E. Kirton, D. Platt, E. Szeto, A. Salamov, K. Barry, N. Mikhailova, N. C. Kyrpides, E. G. Matson, E. A. Ottesen, X. Zhang, M. Hernandez, C. Murillo, L. G. Acosta, I. Rigoutsos, G. Tamayo, B. D. Green, C. Chang, E. M. Rubin, E. J. Mathur, D. E. Robertson, P. Hugenholtz and J. R. Leadbetter. "Metagenomic and Functional Analysis of Hindgut Microbiota of a Wood-Feeding Higher Termite". Nature 450, no. 7169 (2007): 560-5.
-
(2007)
Nature
, vol.450
, Issue.7169
, pp. 560-565
-
-
Warnecke, F.1
Luginbuhl, P.2
Ivanova, N.3
Ghassemian, M.4
Richardson, T.H.5
Stege, J.T.6
Cayouette, M.7
McHardy, A.C.8
Djordjevic, G.9
Aboushadi, N.10
Sorek, R.11
Tringe, S.G.12
Podar, M.13
Martin, H.G.14
Kunin, V.15
Dalevi, D.16
Madejska, J.17
Kirton, E.18
Platt, D.19
Szeto, E.20
Salamov, A.21
Barry, K.22
Mikhailova, N.23
Kyrpides, N.C.24
Matson, E.G.25
Ottesen, E.A.26
Zhang, X.27
Hernandez, M.28
Murillo, C.29
Acosta, L.G.30
Rigoutsos, I.31
Tamayo, G.32
Green, B.D.33
Chang, C.34
Rubin, E.M.35
Mathur, E.J.36
Robertson, D.E.37
Hugenholtz, P.38
Leadbetter, J.R.39
more..
-
86
-
-
33847192507
-
Physiological, ecological, and phylogenetic characterization of Stappia, a marine CO-oxidizing bacterial genus
-
Weber, C.F. and King, G.M. (2007) Physiological, ecological, and phylogenetic characterization of Stappia, a marine CO-oxidizing bacterial genus. Appl Environ Microbiol 73(4), 1266-1276.
-
(2007)
Appl Environ Microbiol
, vol.73
, Issue.4
, pp. 1266-1276
-
-
Weber, C.F.1
King, G.M.2
-
87
-
-
33745208719
-
-
Wu D, Daugherty SC, Van Aken SE, Pai GH, Watkins KL, Khouri H, Tallon LJ, Zaborsky JM, Dunbar HE, Tran PL, etal. (2006) PloS Biol 4:1079-1092.
-
(2006)
PloS Biol
, vol.4
, pp. 1079-1092
-
-
Wu, D.1
Daugherty, S.C.2
Van Aken, S.E.3
Pai, G.H.4
Watkins, K.L.5
Khouri, H.6
Tallon, L.J.7
Zaborsky, J.M.8
Dunbar, H.E.9
Tran, P.L.10
-
88
-
-
0037470975
-
'A Genomic View of the Human-Bacteroides Thetaiotaomicron Symbiosis'
-
Xu, J., M. K. Bjursell, J. Himrod, S. Deng, L. K. Carmichael, H. C. Chiang, L. V. Hooper and J. I. Gordon. "A Genomic View of the Human-Bacteroides Thetaiotaomicron Symbiosis". Science 299, no. 5615 (2003): 2074-6.
-
(2003)
Science
, vol.299
, Issue.5615
, pp. 2074-2076
-
-
Xu, J.1
Bjursell, M.K.2
Himrod, J.3
Deng, S.4
Carmichael, L.K.5
Chiang, H.C.6
Hooper, L.V.7
Gordon, J.I.8
-
89
-
-
77952732138
-
Endozoicomonas montiporae sp. nov., isolated from the encrusting pore coral Montipora aequituberculata
-
Yang, C. S., M. H. Chen, A. B. Arun, C. A. Chen, J. T. Wang, and W. M. Chen. 2010. Endozoicomonas montiporae sp. nov., isolated from the encrusting pore coral Montipora aequituberculata. Int J Syst Evol Microbiol 60:1158-1162.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 1158-1162
-
-
Yang, C.S.1
Chen, M.H.2
Arun, A.B.3
Chen, C.A.4
Wang, J.T.5
Chen, W.M.6
-
90
-
-
0037371597
-
Mechanisms of antimicrobial peptide action and resistance
-
Yeaman, M.R. and Yount, N.Y. (2003) Mechanisms of antimicrobial peptide action and resistance. Pharmacol Rev 55(1), 27-55.
-
(2003)
Pharmacol Rev
, vol.55
, Issue.1
, pp. 27-55
-
-
Yeaman, M.R.1
Yount, N.Y.2
-
91
-
-
0035151030
-
A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al
-
1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis
-
Young JM, Kuykendall LD, Martínez-Romero E, Kerr A, Sawada H. A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis. Int J Syst Evol Microbiol. 2001. 51(Pt 1):89-103.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 89-103
-
-
Young, J.M.1
Kuykendall, L.D.2
Martínez-Romero, E.3
Kerr, A.4
Sawada, H.5
-
92
-
-
79959979274
-
PHAST: a fast phage search tool
-
Zhou, Y., Liang, Y., Lynch, K.H., Dennis, J.J. and Wishart, D.S. (2011) PHAST: a fast phage search tool. Nucleic Acids Res 39(Web Server issue), W347-352.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.WEB SERVER ISSUE
, pp. W347-W352
-
-
Zhou, Y.1
Liang, Y.2
Lynch, K.H.3
Dennis, J.J.4
Wishart, D.S.5
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