Genomic characterization of G3P[6], G4P[6] and G4P[8] human rotaviruses from Wuhan, China: Evidence for interspecies transmission and reassortment events

Infection, Genetics and Evolution

Volumn 33, Issue , 2015, Pages 55-71

  Zhou, Xuan ^a   Wang, Yuan Hong ^a   Ghosh, Souvik ^b,c   Tang, Wei Feng ^a   Pang, Bei Bei ^a   Liu, Man Qing ^a   Peng, Jin Song ^a   Zhou, Dun Jin ^a   Kobayashi, Nobumichi ^c  

^a Wuhan Centers for Disease Prevention and Control   (China)

^b ROSS UNIVERSITY SCHOOL OF VETERINARY MEDICINE   (Saint Kitts and Nevis)

^c SAPPORO MEDICAL UNIVERSITY SCHOOL OF MEDICINE   (Japan)

Author keywords

Human rotavirus; Interspecies transmission; Porcine like rotavirus; Reassortment; Whole genome analysis

Indexed keywords

ARTICLE; CHINA; FEMALE; GENE CLUSTER; GENETIC ANALYSIS; GENETIC REASSORTMENT; GENETIC VARIABILITY; GENOTYPE; HUMAN; INFANT; MALE; NONHUMAN; NSP1 GENE; NSP2 GENE; NSP3 GENE; NSP5 GENE; NUCLEOTIDE SEQUENCE; PHYLOGENY; PIG; PRIORITY JOURNAL; ROTAVIRUS A; ROTAVIRUS A/HUMAN-TC/CHN/R479/2004/G4P[6]; ROTAVIRUS A/HUMAN-TC/ECU/EC2184/2005-2006/G11P[6]; ROTAVIRUS A/HUMAN-TC/GBR/ST3/1975/G4P[6]; ROTAVIRUS A/HUMAN-TC/JPN/AU19/XXXX/G1P[6]; ROTAVIRUS A/HUMAN-TC/USA/WA/1974/G1P[8]; ROTAVIRUS A/HUMAN-WT/ARG/ARG4605/2006/G4P[6]; ROTAVIRUS A/HUMAN-WT/BEL/BE2001/2009/G9P[6]; ROTAVIRUS A/HUMAN-WT/BRA/HSP180/1999/G4P[6]; ROTAVIRUS A/HUMAN-WT/CHN/E2484/2011/G4P[8]; ROTAVIRUS A/HUMAN-WT/CHN/E931/2008/G4P[6]; ROTAVIRUS A/HUMAN-WT/CHN/GX77/2010/G4P[6]; ROTAVIRUS A/HUMAN-WT/CHN/LL3354/2000/G5P[6]; ROTAVIRUS A/HUMAN-WT/CHN/LL36755/2003/G5P[6]; ROTAVIRUS A/HUMAN-WT/CHN/LL4260/2001/G5P[6]; ROTAVIRUS A/HUMAN-WT/CHN/R1954/2013/G4P[6]; ROTAVIRUS A/HUMAN-WT/CHN/R946/2006/G3P[6]; ROTAVIRUS A/HUMAN-WT/HUN/BP1125/2004/G4P[6]; ROTAVIRUS A/HUMAN-WT/HUN/BP1227/2002/G4P[6]; ROTAVIRUS A/HUMAN-WT/HUN/BP1231/2002/G4P[6]; ROTAVIRUS A/HUMAN-WT/HUN/BP1490/1994/G4P[6]; ROTAVIRUS A/HUMAN-WT/HUN/BP1547/2005/G4P[6]; ROTAVIRUS A/HUMAN-WT/HUN/BP1792/2004/G4P[6]; ROTAVIRUS A/HUMAN-WT/HUN/BP1901/1991/G4P[6]; ROTAVIRUS A/HUMAN-WT/HUN/BP271/2000/G4P[6]; ROTAVIRUS A/HUMAN-WT/IND/MANI-362/2007/G4P[6]; ROTAVIRUS A/HUMAN-WT/JPN/RYUKYU-1120/2011/G5P[6]; ROTAVIRUS A/HUMAN-WT/NCA/OL/2010/G4P[6]; ROTAVIRUS A/HUMAN-WT/PRY/1809SR/2009/G4P[6]; ROTAVIRUS A/HUMAN-XX/IND/MCS/1307/2007/G9P[6]; ROTAVIRUS A/PANDA-WT/CHN/CH-1/2009/G1P[7]; ROTAVIRUS A/PIG-TC/CHN/TMTL/2008/G9P[23]; ROTAVIRUS A/PIG-TC/USA/GOTTFRIED/1975/G4P[6]; ROTAVIRUS A/PIG-WT/CAN/F8P4-A/2006/G2P[6]; ROTAVIRUS A/PIG-WT/CHN/TM-A/2009/G9P[23]; ROTAVIRUS A/PIG-WT/ZAF/MRC-DPRU1567-A/2008/G5P[6]; ROTAVIRUS A/PIG-WT/ZAF/MRC-DPRU1567-B/2008/G5P[6]; SEQUENCE ANALYSIS; VIRUS GENE; VIRUS IDENTIFICATION; VIRUS STRAIN; VIRUS TRANSMISSION; VP1 GENE; VP2 GENE; VP3 GENE; VP4 GENE; VP6 GENE; VP7 GENE; ALLELE; AMINO ACID SUBSTITUTION; ANIMAL; CLASSIFICATION; GENETICS; GENOMICS; MICROBIOLOGY; MUTATION; ROTAVIRUS; ROTAVIRUS INFECTIONS; TRANSMISSION; VIRUS GENOME;

HUMAN ROTAVIRUS A; ROTAVIRUS; ROTAVIRUS A; SUS;

VIRAL PROTEIN;

ALLELES; AMINO ACID SUBSTITUTION; ANIMALS; GENOME, VIRAL; GENOMICS; GENOTYPE; HUMANS; MUTATION; PHYLOGENY; REASSORTANT VIRUSES; ROTAVIRUS; ROTAVIRUS INFECTIONS; VIRAL PROTEINS;

EID: 84937968186     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2015.04.010     Document Type: Article

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