메뉴 건너뛰기




Volumn 162, Issue 1, 2013, Pages 94-102

Full-length genome analysis of G2, G9 and G11 porcine group A rotaviruses

Author keywords

Ecology; Evolution; Phylogeny; Rotavirus; Swine; Zoonoses

Indexed keywords

NONSTRUCTURAL PROTEIN 3; NONSTRUCTURAL PROTEIN 4; PROTEIN VP6;

EID: 84872194745     PISSN: 03781135     EISSN: 18732542     Source Type: Journal    
DOI: 10.1016/j.vetmic.2012.08.028     Document Type: Article
Times cited : (26)

References (42)
  • 2
    • 0021164593 scopus 로고
    • Antigenic and pathogenic relationships of three bovine rotaviruses and a porcine rotavirus
    • Bridger J.C., Brown J.F. Antigenic and pathogenic relationships of three bovine rotaviruses and a porcine rotavirus. J. Gen. Virol. 1984, 65(Pt 7):1151-1158.
    • (1984) J. Gen. Virol. , vol.65 , Issue.PART 7 , pp. 1151-1158
    • Bridger, J.C.1    Brown, J.F.2
  • 3
    • 0022618988 scopus 로고
    • Variation in virulence of bovine rotaviruses
    • Bridger J.C., Pocock D.H. Variation in virulence of bovine rotaviruses. J. Hyg. (Lond.) 1986, 96:257-264.
    • (1986) J. Hyg. (Lond.) , vol.96 , pp. 257-264
    • Bridger, J.C.1    Pocock, D.H.2
  • 4
    • 0016716539 scopus 로고
    • Neonatal calf diarrhoea: identification of a reovirus-like (rotavirus) agent in faeces by immunofluorescence and immune electron microscopy
    • Bridger J.C., Woode G.N. Neonatal calf diarrhoea: identification of a reovirus-like (rotavirus) agent in faeces by immunofluorescence and immune electron microscopy. Br. Vet. J. 1975, 528-535.
    • (1975) Br. Vet. J. , pp. 528-535
    • Bridger, J.C.1    Woode, G.N.2
  • 6
    • 77957847866 scopus 로고    scopus 로고
    • Identification of a G2-like porcine rotavirus bearing a novel VP4 type P[32]
    • Collins P.J., Martella V., Buonavoglia C., O'Shea H. Identification of a G2-like porcine rotavirus bearing a novel VP4 type P[32]. Vet. Res. 2010, 41:73.
    • (2010) Vet. Res. , vol.41 , pp. 73
    • Collins, P.J.1    Martella, V.2    Buonavoglia, C.3    O'Shea, H.4
  • 7
    • 34548407520 scopus 로고    scopus 로고
    • Rotaviruses
    • Lippincott Williams & Wilkins, Philadelphia, PA, D.M. Knipe, D.E. Griffin, R.A. Lamb, S.E. Strauss, P.M. Howley, M.A. Martin, B. Roizman (Eds.)
    • Estes M.K., Kapikian A.Z. Rotaviruses. Fields Virology 2007, 1917-1974. Lippincott Williams & Wilkins, Philadelphia, PA. 5th ed. D.M. Knipe, D.E. Griffin, R.A. Lamb, S.E. Strauss, P.M. Howley, M.A. Martin, B. Roizman (Eds.).
    • (2007) Fields Virology , pp. 1917-1974
    • Estes, M.K.1    Kapikian, A.Z.2
  • 10
    • 84862512488 scopus 로고    scopus 로고
    • Evidence for the porcine origin of equine rotavirus strain H-1
    • Ghosh S., Shintani T., Kobayashi N. Evidence for the porcine origin of equine rotavirus strain H-1. Vet. Microbiol. 2012, 158:410-414.
    • (2012) Vet. Microbiol. , vol.158 , pp. 410-414
    • Ghosh, S.1    Shintani, T.2    Kobayashi, N.3
  • 11
    • 84857658234 scopus 로고    scopus 로고
    • Whole genomic analysis reveals the porcine origin of human G9P[19] rotavirus strains Mc323 and Mc345
    • Ghosh S., Urushibara N., Taniguchi K., Kobayashi N. Whole genomic analysis reveals the porcine origin of human G9P[19] rotavirus strains Mc323 and Mc345. Infect. Genet. Evol. 2012, 12:471-477.
    • (2012) Infect. Genet. Evol. , vol.12 , pp. 471-477
    • Ghosh, S.1    Urushibara, N.2    Taniguchi, K.3    Kobayashi, N.4
  • 12
    • 0028929581 scopus 로고
    • Is rotavirus a population of reassortants?
    • Gouvea V., Brantly M. Is rotavirus a population of reassortants?. Trends Microbiol. 1995, 3:159-162.
    • (1995) Trends Microbiol. , vol.3 , pp. 159-162
    • Gouvea, V.1    Brantly, M.2
  • 14
    • 79956010684 scopus 로고    scopus 로고
    • Rotavirus genotypes co-circulating in Europe between 2006 and 2009 as determined by EuroRotaNet, a pan-European collaborative strain surveillance network
    • Iturriza-Gomara M., et al. Rotavirus genotypes co-circulating in Europe between 2006 and 2009 as determined by EuroRotaNet, a pan-European collaborative strain surveillance network. Epidemiol. Infect. 2011, 139:895-909.
    • (2011) Epidemiol. Infect. , vol.139 , pp. 895-909
    • Iturriza-Gomara, M.1
  • 16
    • 34147100742 scopus 로고    scopus 로고
    • Novel porcine rotavirus of genotype P[27] shares new phylogenetic lineage with G2 porcine rotavirus strain
    • Khamrin P., Maneekarn N., Peerakome S., Chan-it W., Yagyu F., Okitsu S., Ushijima H. Novel porcine rotavirus of genotype P[27] shares new phylogenetic lineage with G2 porcine rotavirus strain. Virology 2007, 361:243-252.
    • (2007) Virology , vol.361 , pp. 243-252
    • Khamrin, P.1    Maneekarn, N.2    Peerakome, S.3    Chan-it, W.4    Yagyu, F.5    Okitsu, S.6    Ushijima, H.7
  • 18
    • 38849137278 scopus 로고    scopus 로고
    • Changing profile of rotavirus in Ireland: predominance of P[8] and emergence of P[6] and P[9] in mixed infections
    • Lennon G., Reidy N., Cryan B., Fanning S., O'Shea H. Changing profile of rotavirus in Ireland: predominance of P[8] and emergence of P[6] and P[9] in mixed infections. J. Med. Virol. 2008, 80:524-530.
    • (2008) J. Med. Virol. , vol.80 , pp. 524-530
    • Lennon, G.1    Reidy, N.2    Cryan, B.3    Fanning, S.4    O'Shea, H.5
  • 19
    • 72449136215 scopus 로고    scopus 로고
    • RotaC: a web-based tool for the complete genome classification of group A rotaviruses
    • Maes P., Matthijnssens J., Rahman M., Van R.M. RotaC: a web-based tool for the complete genome classification of group A rotaviruses. BMC Microbiol. 2009, 9:238.
    • (2009) BMC Microbiol. , vol.9 , pp. 238
    • Maes, P.1    Matthijnssens, J.2    Rahman, M.3    Van, R.M.4
  • 24
    • 79960890613 scopus 로고    scopus 로고
    • Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG)
    • Matthijnssens J., et al. Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG). Arch. Virol. 2011, 156:1397-1413.
    • (2011) Arch. Virol. , vol.156 , pp. 1397-1413
    • Matthijnssens, J.1
  • 26
    • 77957234590 scopus 로고    scopus 로고
    • Phylodynamic analyses of rotavirus genotypes G9 and G12 underscore their potential for swift global spread
    • Matthijnssens J., Heylen E., Zeller M., Rahman M., Lemey P., Van R.M. Phylodynamic analyses of rotavirus genotypes G9 and G12 underscore their potential for swift global spread. Mol. Biol. Evol. 2010, 27:2431-2436.
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 2431-2436
    • Matthijnssens, J.1    Heylen, E.2    Zeller, M.3    Rahman, M.4    Lemey, P.5    Van, R.M.6
  • 29
    • 79951952059 scopus 로고    scopus 로고
    • Genome sequence based molecular epidemiology of unusual US Rotavirus A G9 strains isolated from Omaha USA between 1997 and 2000
    • Mijatovic-Rustempasic S., Banyai K., Esona M.D., Foytich K., Bowen M.D., Gentsch J.R. Genome sequence based molecular epidemiology of unusual US Rotavirus A G9 strains isolated from Omaha USA between 1997 and 2000. Infect. Genet. Evol. 2011, 11:522-527.
    • (2011) Infect. Genet. Evol. , vol.11 , pp. 522-527
    • Mijatovic-Rustempasic, S.1    Banyai, K.2    Esona, M.D.3    Foytich, K.4    Bowen, M.D.5    Gentsch, J.R.6
  • 30
    • 79960890403 scopus 로고    scopus 로고
    • Full genomic analyses of human rotavirus G4P[4], G4P[6] G9P[19] and G10P[6] strains from North-eastern India: evidence for interspecies transmission and complex reassortment events
    • Mukherjee A., Ghosh S., Bagchi P., Dutta D., Chattopadhyay S., Kobayashi N., Chawla-Sarkar M. Full genomic analyses of human rotavirus G4P[4], G4P[6] G9P[19] and G10P[6] strains from North-eastern India: evidence for interspecies transmission and complex reassortment events. Clin. Microbiol. Infect. 2011, 17:1343-1346.
    • (2011) Clin. Microbiol. Infect. , vol.17 , pp. 1343-1346
    • Mukherjee, A.1    Ghosh, S.2    Bagchi, P.3    Dutta, D.4    Chattopadhyay, S.5    Kobayashi, N.6    Chawla-Sarkar, M.7
  • 31
    • 0347695009 scopus 로고    scopus 로고
    • Antigenic and genetic characterization of serotype G2 human rotavirus strains from South Africa from 1984 to 1998
    • Page N.A., Steele A.D. Antigenic and genetic characterization of serotype G2 human rotavirus strains from South Africa from 1984 to 1998. J. Med. Virol. 2004, 72:320-327.
    • (2004) J. Med. Virol. , vol.72 , pp. 320-327
    • Page, N.A.1    Steele, A.D.2
  • 34
    • 27744561624 scopus 로고    scopus 로고
    • Emergence of G3 and G9 rotavirus and increased incidence of mixed infections in the southern region of Ireland 2001-2004
    • Reidy N., O'Halloran F., Fanning S., Cryan B., O'Shea H. Emergence of G3 and G9 rotavirus and increased incidence of mixed infections in the southern region of Ireland 2001-2004. J. Med. Virol. 2005, 77:571-578.
    • (2005) J. Med. Virol. , vol.77 , pp. 571-578
    • Reidy, N.1    O'Halloran, F.2    Fanning, S.3    Cryan, B.4    O'Shea, H.5
  • 35
    • 11244302672 scopus 로고    scopus 로고
    • Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine
    • Santos N., Hoshino Y. Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine. Rev. Med. Virol. 2005, 15:29-56.
    • (2005) Rev. Med. Virol. , vol.15 , pp. 29-56
    • Santos, N.1    Hoshino, Y.2
  • 37
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 38
    • 84856217709 scopus 로고    scopus 로고
    • 2008 estimate of worldwide rotavirus-associated mortality in children younger than 5 years before the introduction of universal rotavirus vaccination programmes: a systematic review and meta-analysis
    • Tate J.E., Burton A.H., Boschi-Pinto C., Steele A.D., Duque J., Parashar U.D. 2008 estimate of worldwide rotavirus-associated mortality in children younger than 5 years before the introduction of universal rotavirus vaccination programmes: a systematic review and meta-analysis. Lancet Infect. Dis. 2012, 12:136-141.
    • (2012) Lancet Infect. Dis. , vol.12 , pp. 136-141
    • Tate, J.E.1    Burton, A.H.2    Boschi-Pinto, C.3    Steele, A.D.4    Duque, J.5    Parashar, U.D.6
  • 40
    • 77953527094 scopus 로고    scopus 로고
    • Full genomic analysis of a porcine-bovine reassortant G4P[6] rotavirus strain R479 isolated from an infant in China
    • Wang Y.H., Kobayashi N., Nagashima S., Zhou X., Ghosh S., Peng J.S., Hu Q., Zhou D.J., Yang Z.Q. Full genomic analysis of a porcine-bovine reassortant G4P[6] rotavirus strain R479 isolated from an infant in China. J. Med. Virol. 2010, 82:1094-1102.
    • (2010) J. Med. Virol. , vol.82 , pp. 1094-1102
    • Wang, Y.H.1    Kobayashi, N.2    Nagashima, S.3    Zhou, X.4    Ghosh, S.5    Peng, J.S.6    Hu, Q.7    Zhou, D.J.8    Yang, Z.Q.9
  • 41
    • 0027754163 scopus 로고
    • Genomic relatedness of five equine rotavirus strains with different G serotype and P type specificities
    • Wu H., Taniguchi K., Urasawa T., Urasawa S. Genomic relatedness of five equine rotavirus strains with different G serotype and P type specificities. Res. Virol. 1993, 144:455-464.
    • (1993) Res. Virol. , vol.144 , pp. 455-464
    • Wu, H.1    Taniguchi, K.2    Urasawa, T.3    Urasawa, S.4
  • 42
    • 84865389252 scopus 로고    scopus 로고
    • Full genome characterization of a porcine-like human G9P[6] rotavirus strain isolated from an infant in Belgium
    • Zeller M., Heylen E., De C.S., Van R.M., Matthijnssens J. Full genome characterization of a porcine-like human G9P[6] rotavirus strain isolated from an infant in Belgium. Infect. Genet. Evol. 2012, 12:1492-1500.
    • (2012) Infect. Genet. Evol. , vol.12 , pp. 1492-1500
    • Zeller, M.1    Heylen, E.2    De, C.S.3    Van, R.M.4    Matthijnssens, J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.