Novel human rotavirus genotype G5P[7] from child with diarrhea, Cameroon

Emerging Infectious Diseases

Volumn 15, Issue 1, 2009, Pages 83-86

  Esona, Mathew D ^a   Geyer, Annelise ^b   Banyai, Krisztian ^c   Page, Nicola ^d   Aminu, Maryam ^e   Armah, George E ^f   Hull, Jennifer ^a   Steele, Duncan A ^g   Glass, Roger I ^h   Gentsch, Jon R ^a  

^a CENTERS FOR DISEASE CONTROL AND PREVENTION   (United States)

^b UNIVERSITY OF LIMPOPO   (South Africa)

^c Association of Public Health Laboratories   (United States)

^d NATIONAL INSTITUTE FOR COMMUNICABLE DISEASES   (South Africa)

^e AHMADU BELLO UNIVERSITY   (Nigeria)

^f University of Ghana   (Ghana)

^g Program for Appropriate Technology in Health   (United States)

^h NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CAMEROON; CHILD; DIARRHEA; DISEASE SURVEILLANCE; GENE SEQUENCE; GENETIC REASSORTMENT; GENETIC VARIABILITY; GENOTYPE; HETEROLOGOUS EXPRESSION; HUMAN; HUMAN ROTAVIRUS; MAJOR CLINICAL STUDY; NUCLEOTIDE SEQUENCE; SWINE; VIRUS CHARACTERIZATION; VIRUS STRAIN;

ANIMALS; CAMEROON; DIARRHEA; GENOTYPE; HUMANS; MOLECULAR SEQUENCE DATA; PHYLOGENY; REASSORTANT VIRUSES; ROTAVIRUS; ROTAVIRUS INFECTIONS; SEQUENCE ANALYSIS, DNA; SWINE; VIRAL NONSTRUCTURAL PROTEINS; VIRAL STRUCTURAL PROTEINS;

EID: 58849156537     PISSN: 10806040     EISSN: 10806059     Source Type: Journal    
DOI: 10.3201/eid1501.080899     Document Type: Article

References (14)

1. Estes M, Kapikian A. Rotaviruses. In: Knipe DM, Howley PM, Griffin DE, Martin MA, Lamb RA, Roizman B, et al., editors. In: Fields virology. 5th ed. Philadelphia: Lippincott, Williams & Wilkins; 2007. p. 1917-74.
2. Gentsch JR, Laird AR, Bielfelt B, Griffin DD, Banyai K, Ramachandran M, et al. Serotype diversity and reassortment between human and animal rotavirus strains: implications for rotavirus vaccine programs. J Infect Dis. 2005;192:S146-59. DOI: 10.1086/431499
3. Maunula L, von Bonsdorff CH. Short sequences define genetic lineages: phylogenetic analysis of group A rotaviruses based on partial sequences of genome segments 4 and 9. J Gen Virol. 1998;79:321-32.
4. Rahman M, Matthijnssens J, Yang XL, Delbeke T, Arijs I, Taniguchi K, et al. Evolutionary history and global spread of the emerging G12 human rotaviruses. J Virol. 2007;81:2382-90. DOI: 10.1128/JVI.01622-06
5. Gentsch JR, Glass RI, Woods P, Gouvea V, Gorziglia M, Flores J, et al. Identification of group-A rotavirus gene-4 types by polymerase chain reaction. J Clin Microbiol. 1992;30:1365-73.
6. Das BK, Gentsch JR, Cicirello HG, Woods PA, Gupta A, Ramachandran M, et al. Characterization of rotavirus strains from newborns in New Delhi, India. J Clin Microbiol. 1994;32:1820-2.
7. Iturriza-Gomara M, Isherwood B, Desselberger U, Gray J. Reassortment in vivo: driving force for diversity of human rotavirus strains isolated in the United Kingdom between 1995 and 1999. J Virol. 2001;75:3696-705. DOI: 10.1128/JVI.75.8.3696-3705.2001
8. Iturriza-Gómara M, Wong C, Blome S, Desselberger U, Gray J. Rotavirus subgroup characterisation by restriction endonuclease digestion of a cDNA fragment of the VP6 gene. J Virol Methods. 2002;105:99-103. DOI: 10.1016/S0166-0934(02)00087-3
9. Tamura K, Dudley J, Nei M, Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol. 2007;24:1596-9. DOI: 10.1093/molbev/msm092
10. Esona MD, Armah GE, Geyer A, Steele AD. Detection of an unusual human rotavirus strain with G5P[8] specificity in a Cameroonian child with diarrhea. J Clin Microbiol. 2004;42:441-4. DOI: 10.1128/JCM.42.1.441-444.2004
11. Matthijnssens J, Ciarlet M, Heiman E, Arijs I, Delbeke T, McDonald SM, et al. Full genome-based classification of rotaviruses reveals a common origin between human Wa-like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains. J Virol. 2008;82:3204-19. DOI: 10.1128/JVI.02257-07
12. Gouvea V, Decastro L, Timenetsky MD, Greenberg H, Santos N. Rotavirus serotype G5 associated with diarrhea in Brazilian children. J Clin Microbiol. 1994;32:1408-9.
13. Ahmed K, Anh DD, Nakagomi O. Rotavirus G5P[6] in child with diarrhea, Vietnam. Emerg Infect Dis. 2007;13:1232-5.
14. Duan ZJ, Li DD, Zhang Q, Liu N, Huang CP, Jiang X, et al. Novel human rotavirus of genotype G5P[6] identified in a stool specimen from a Chinese girl with diarrhea. J Clin Microbiol. 2007;45:1614-7. DOI: 10.1128/JCM.00032-07