메뉴 건너뛰기




Volumn 43, Issue 3, 2015, Pages e17-

Targeting non-coding RNAs with the CRISPR/Cas9 system in human cell lines

Author keywords

[No Author keywords available]

Indexed keywords

CELL PROTEIN; LONG UNTRANSLATED RNA; LONG UNTRANSLATED RNA 21A; MICRORNA 21; MICRORNA 29A; PROTEIN AK023948; PROTEIN UCA1; UNCLASSIFIED DRUG; UNTRANSLATED RNA; MICRORNA;

EID: 84936077333     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gku1198     Document Type: Article
Times cited : (214)

References (41)
  • 3
    • 0034737298 scopus 로고    scopus 로고
    • RNAi: Double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals
    • Zamore,P.D., Tuschl,T., Sharp,P.A. and Bartel,D.P. (2000) RNAi: double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21 to 23 nucleotide intervals. Cell, 101, 25-33.
    • (2000) Cell , vol.101 , pp. 25-33
    • Zamore, P.D.1    Tuschl, T.2    Sharp, P.A.3    Bartel, D.P.4
  • 4
    • 84890559595 scopus 로고    scopus 로고
    • Long non-coding RNAs: New players in cell differentiation and development
    • Fatica,A. and Bozzoni,I. (2014) Long non-coding RNAs: new players in cell differentiation and development. Nat. Rev. Genet., 15, 7-21.
    • (2014) Nat. Rev. Genet. , vol.15 , pp. 7-21
    • Fatica, A.1    Bozzoni, I.2
  • 6
    • 84873655874 scopus 로고    scopus 로고
    • Molecular biology. New tool for genome surgery
    • van der Oost,J. (2013) Molecular biology. New tool for genome surgery. Science, 339, 768-770.
    • (2013) Science , vol.339 , pp. 768-770
    • Van Der Oost, J.1
  • 7
    • 0030032063 scopus 로고    scopus 로고
    • Hybrid restriction enzymes: Zinc finger fusions to Fok I cleavage domain
    • Kim,Y.G., Cha,J. and Chandrasegaran,S. (1996) Hybrid restriction enzymes: zinc finger fusions to Fok I cleavage domain. Proc. Natl Acad. Sci. U.S.A., 93, 1156-1160.
    • (1996) Proc. Natl Acad. Sci. U.S.A. , vol.93 , pp. 1156-1160
    • Kim, Y.G.1    Cha, J.2    Chandrasegaran, S.3
  • 8
    • 84904615174 scopus 로고    scopus 로고
    • TALEN-mediated genome editing: Prospects and perspectives
    • Wright,D.A., Li,T., Yang,B. and Spalding,M.H. (2014) TALEN-mediated genome editing: prospects and perspectives. Biochem. J., 462, 15-24.
    • (2014) Biochem. J. , vol.462 , pp. 15-24
    • Wright, D.A.1    Li, T.2    Yang, B.3    Spalding, M.H.4
  • 9
    • 84875963894 scopus 로고    scopus 로고
    • Enhanced efficiency of human pluripotent stem cell genome editing through replacing TALENs with CRISPRs
    • Ding,Q., Regan,S.N., Xia,Y., Oostrom,L.A., Cowan,C.A. and Musunuru,K. (2013) Enhanced efficiency of human pluripotent stem cell genome editing through replacing TALENs with CRISPRs. Cell Stem Cell, 12, 393-394.
    • (2013) Cell Stem Cell , vol.12 , pp. 393-394
    • Ding, Q.1    Regan, S.N.2    Xia, Y.3    Oostrom, L.A.4    Cowan, C.A.5    Musunuru, K.6
  • 11
    • 84876409836 scopus 로고    scopus 로고
    • Genome editing with RNA-guided Cas9 nuclease in zebrafish embryos
    • Chang,N., Sun,C., Gao,L., Zhu,D., Xu,X., Zhu,X., Xiong,J.W. and Xi,J.J. (2013) Genome editing with RNA-guided Cas9 nuclease in zebrafish embryos. Cell Res., 23, 465-472.
    • (2013) Cell Res. , vol.23 , pp. 465-472
    • Chang, N.1    Sun, C.2    Gao, L.3    Zhu, D.4    Xu, X.5    Zhu, X.6    Xiong, J.W.7    Xi, J.J.8
  • 12
    • 84877707375 scopus 로고    scopus 로고
    • One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering
    • Wang,H., Yang,H., Shivalila,C.S., Dawlaty,M.M., Cheng,A.W., Zhang,F. and Jaenisch,R. (2013) One-step generation of mice carrying mutations in multiple genes by CRISPR/Cas-mediated genome engineering. Cell, 153, 910-918.
    • (2013) Cell , vol.153 , pp. 910-918
    • Wang, H.1    Yang, H.2    Shivalila, C.S.3    Dawlaty, M.M.4    Cheng, A.W.5    Zhang, F.6    Jaenisch, R.7
  • 14
    • 80755187812 scopus 로고    scopus 로고
    • CRISPR-Cas systems in bacteria and archaea: Versatile small RNAs for adaptive defense and regulation
    • Bhaya,D., Davison,M. and Barrangou,R. (2011) CRISPR-Cas systems in bacteria and archaea: versatile small RNAs for adaptive defense and regulation. Annu. Rev. Genet., 45, 273-297.
    • (2011) Annu. Rev. Genet. , vol.45 , pp. 273-297
    • Bhaya, D.1    Davison, M.2    Barrangou, R.3
  • 15
    • 84862657238 scopus 로고    scopus 로고
    • CRISPR: New horizons in phage resistance and strain identification
    • Barrangou,R. and Horvath,P. (2012) CRISPR: new horizons in phage resistance and strain identification. Annu. Rev. Food Sci. Technol., 3, 143-162.
    • (2012) Annu. Rev. Food Sci. Technol. , vol.3 , pp. 143-162
    • Barrangou, R.1    Horvath, P.2
  • 16
    • 84865070369 scopus 로고    scopus 로고
    • A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity
    • Jinek,M., Chylinski,K., Fonfara,I., Hauer,M., Doudna,J.A. and Charpentier,E. (2012) A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity. Science, 337, 816-821.
    • (2012) Science , vol.337 , pp. 816-821
    • Jinek, M.1    Chylinski, K.2    Fonfara, I.3    Hauer, M.4    Doudna, J.A.5    Charpentier, E.6
  • 18
    • 84874624936 scopus 로고    scopus 로고
    • Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease
    • Cho,S.W., Kim,S., Kim,J.M. and Kim,J.S. (2013) Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease. Nat. Biotechnol., 31, 230-232.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 230-232
    • Cho, S.W.1    Kim, S.2    Kim, J.M.3    Kim, J.S.4
  • 20
    • 84874608929 scopus 로고    scopus 로고
    • RNA-guided editing of bacterial genomes using CRISPR-Cas systems
    • Jiang,W., Bikard,D., Cox,D., Zhang,F. and Marraffini,L.A. (2013) RNA-guided editing of bacterial genomes using CRISPR-Cas systems. Nat. Biotechnol., 31, 233-239.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 233-239
    • Jiang, W.1    Bikard, D.2    Cox, D.3    Zhang, F.4    Marraffini, L.A.5
  • 26
    • 18044396221 scopus 로고    scopus 로고
    • Ku protein targeting by Ku70 small interfering RNA enhances human cancer cell response to topoisomerase II inhibitor and gamma radiation
    • Ayene,I.S., Ford,L.P. and Koch,C.J. (2005) Ku protein targeting by Ku70 small interfering RNA enhances human cancer cell response to topoisomerase II inhibitor and gamma radiation. Mol. Cancer Ther., 4, 529-536.
    • (2005) Mol. Cancer Ther. , vol.4 , pp. 529-536
    • Ayene, I.S.1    Ford, L.P.2    Koch, C.J.3
  • 27
    • 34249666089 scopus 로고    scopus 로고
    • Knockdown of DNA ligase IV/XRCC4 by RNA interference inhibits herpes simplex virus type I DNA replication
    • Muylaert,I. and Elias,P. (2007) Knockdown of DNA ligase IV/XRCC4 by RNA interference inhibits herpes simplex virus type I DNA replication. J. Biol. Chem., 282, 10865-10872.
    • (2007) J. Biol. Chem. , vol.282 , pp. 10865-10872
    • Muylaert, I.1    Elias, P.2
  • 29
    • 77949518018 scopus 로고    scopus 로고
    • microRNA-29a induces aberrant self-renewal capacity in hematopoietic progenitors, biased myeloid development, and acute myeloid leukemia
    • Han,Y.C., Park,C.Y., Bhagat,G., Zhang,J., Wang,Y., Fan,J.B., Liu,M., Zou,Y., Weissman,I.L. and Gu,H. (2010) microRNA-29a induces aberrant self-renewal capacity in hematopoietic progenitors, biased myeloid development, and acute myeloid leukemia. J. Exp. Med., 207, 475-489.
    • (2010) J. Exp. Med. , vol.207 , pp. 475-489
    • Han, Y.C.1    Park, C.Y.2    Bhagat, G.3    Zhang, J.4    Wang, Y.5    Fan, J.B.6    Liu, M.7    Zou, Y.8    Weissman, I.L.9    Gu, H.10
  • 30
    • 84917697969 scopus 로고    scopus 로고
    • Long non-coding RNA UCA1 promotes breast tumor growth by suppression of p27 (Kip1)
    • Huang,J., Zhou,N., Watabe,K., Lu,Z., Wu,F., Xu,M. and Mo,Y.Y. (2014) Long non-coding RNA UCA1 promotes breast tumor growth by suppression of p27 (Kip1). Cell Death Dis., 5, e1008.
    • (2014) Cell Death Dis. , vol.5
    • Huang, J.1    Zhou, N.2    Watabe, K.3    Lu, Z.4    Wu, F.5    Xu, M.6    Mo, Y.Y.7
  • 31
    • 33847251953 scopus 로고    scopus 로고
    • New small nuclear RNA gene-like transcriptional units as sources of regulatory transcripts
    • Pagano,A., Castelnuovo,M., Tortelli,F., Ferrari,R., Dieci,G. and Cancedda,R. (2007) New small nuclear RNA gene-like transcriptional units as sources of regulatory transcripts. PLoS Genet., 3,e1.
    • (2007) PLoS Genet. , vol.3 , pp. e1
    • Pagano, A.1    Castelnuovo, M.2    Tortelli, F.3    Ferrari, R.4    Dieci, G.5    Cancedda, R.6
  • 34
    • 41749113108 scopus 로고    scopus 로고
    • MicroRNA-21 (miR-21) post-transcriptionally downregulates tumor suppressor Pdcd4 and stimulates invasion, intravasation and metastasis in colorectal cancer
    • Asangani,I.A., Rasheed,S.A., Nikolova,D.A., Leupold,J.H., Colburn,N.H., Post,S. and Allgayer,H. (2008) MicroRNA-21 (miR-21) post-transcriptionally downregulates tumor suppressor Pdcd4 and stimulates invasion, intravasation and metastasis in colorectal cancer. Oncogene, 27, 2128-2136.
    • (2008) Oncogene , vol.27 , pp. 2128-2136
    • Asangani, I.A.1    Rasheed, S.A.2    Nikolova, D.A.3    Leupold, J.H.4    Colburn, N.H.5    Post, S.6    Allgayer, H.7
  • 35
    • 84900463508 scopus 로고    scopus 로고
    • One ring to bring them all - The role of Ku in mammalian non-homologous end joining
    • Grundy,G.J., Moulding,H.A., Caldecott,K.W. and Rulten,S.L. (2014) One ring to bring them all - the role of Ku in mammalian non-homologous end joining. DNA Repair, 17, 30-38.
    • (2014) DNA Repair , vol.17 , pp. 30-38
    • Grundy, G.J.1    Moulding, H.A.2    Caldecott, K.W.3    Rulten, S.L.4
  • 41
    • 67749147467 scopus 로고    scopus 로고
    • Increased gene targeting in Ku70 and Xrcc4 transiently deficient human somatic cells
    • Bertolini,L.R., Bertolini,M., Maga,E.A., Madden,K.R. and Murray,J.D. (2009) Increased gene targeting in Ku70 and Xrcc4 transiently deficient human somatic cells. Mol. Biotechnol., 41, 106-114.
    • (2009) Mol. Biotechnol. , vol.41 , pp. 106-114
    • Bertolini, L.R.1    Bertolini, M.2    Maga, E.A.3    Madden, K.R.4    Murray, J.D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.