Phosphoinositides: Lipidic essential actors in the intracellular traffic;Les phosphoinositides, des lipides acteurs essentiels du trafic intracellulaire

Biologie Aujourd'hui

Volumn 209, Issue 1, 2015, Pages 97-109

  Bertazzi, Dimitri L ^a   De Craene, Johan Owen ^a   Bär, Séverine ^a   Sanjuan Vazquez, Myriam ^a   Raess, Matthieu A ^a   Friant, Sylvie ^a  

^a UNIVERSITÉ DE STRASBOURG   (France)

Author keywords

Intracellular trafficking; Kinase; Lipids; Phosphatase; Phosphoinositides

Indexed keywords

INOSITOL; PHOSPHATASE; PHOSPHATIDYLINOSITOL; PHOSPHATIDYLINOSITOL 3 PHOSPHATE; PHOSPHATIDYLINOSITOL 4-PHOSPHATE; PHOSPHOTRANSFERASE; POLYPHOSPHOINOSITIDE; VESICULAR TRANSPORT PROTEIN;

CELL MEMBRANE; CELL VACUOLE; CHEMISTRY; ENDOCYTOSIS; ENDOPLASMIC RETICULUM; ENDOSOME; ENZYMOLOGY; GOLGI COMPLEX; HUMAN; INTRACELLULAR SPACE; METABOLISM; MICROSOME; MITOCHONDRION; PHOSPHORYLATION; PHYSIOLOGY; SECOND MESSENGER; TRANSPORT AT THE CELLULAR LEVEL; TRANSPORT VESICLE;

BIOLOGICAL TRANSPORT; CELL MEMBRANE; ENDOCYTOSIS; ENDOPLASMIC RETICULUM; ENDOSOMES; GOLGI APPARATUS; HUMANS; INOSITOL; INTRACELLULAR SPACE; MICROSOMES; MITOCHONDRIA; PHOSPHATIDYLINOSITOL PHOSPHATES; PHOSPHATIDYLINOSITOLS; PHOSPHORIC MONOESTER HYDROLASES; PHOSPHORYLATION; PHOSPHOTRANSFERASES; SECOND MESSENGER SYSTEMS; TRANSPORT VESICLES; VACUOLES; VESICULAR TRANSPORT PROTEINS;

EID: 84933517298     PISSN: 21050678     EISSN: 21050686     Source Type: Journal    
DOI: 10.1051/jbio/2015006     Document Type: Article

References (57)

1. Antonsson, B.E. (1994). Purification and characterization of phosphatidylinositol synthase from human placenta. Biochem J, 297, 517-522.
2. Audhya, A., and Emr, S.D. (2002). Stt4 PI 4-kinase localizes to the plasma membrane and functions in the Pkc1-mediated MAP kinase cascade. Dev Cell, 2, 593-605.
3. Audhya, A., Foti, M., and Emr, S.D. (2000). Distinct roles for the yeast phosphatidylinositol 4-kinases, Stt4p and Pik1p, in secretion, cell growth, and organelle membrane dynamics. Mol Biol Cell, 11, 2673-2689.
4. Bonangelino, C.J., Nau, J.J., Duex, J.E., Brinkman, M., Wurmser, A.E., Gary, J.D., Emr, S.D., and Weisman, L.S. (2002). Osmotic stress-induced increase of phosphatidylinositol 3,5-bisphosphate requires Vac14p, an activator of the lipid kinase Fab1p. J Cell Biol, 156, 1015-1028.
5. Bunce, M.W., Boronenkov, I.V., and Anderson, R.A. (2008). Coordinated activation of the nuclear ubiquitin ligase Cul3-SPOP by the generation of phosphatidylinositol 5-phosphate. J Biol Chem, 283, 8678-8686.
6. Clarke, J.H., Emson, P.C., and Irvine, R.F. (2008). Localization of phosphatidylinositol phosphate kinase IIgamma in kidney to a membrane trafficking compartment within specialized cells of the nephron. Am J Physiol Renal Physiol, 295, F1422-1430.
7. De Craene, J.O., Ripp, R., Lecompte, O., Thompson, J.D., Poch, O., and Friant, S. (2012). Evolutionary analysis of the ENTH/ANTH/VHS protein superfamily reveals a coevolution between membrane trafficking and metabolism. BMC Genomics, 13, 297.
8. De Matteis, M., Godi, A., and Corda, D. (2002). Phosphoinositides and the Golgi complex. Curr Opin Cell Biol, 14, 434-447.
9. Desrivières, S., Cooke, F.T., Parker, P.J., and Hall, M.N. (1998). MSS4, a phosphatidylinositol-4-phosphate 5-kinase required for organization of the actin cytoskeleton in Saccharomyces cerevisiae. J Biol Chem, 273, 15787-15793.
10. Di Paolo, G., and De Camilli, P. (2006). Phosphoinositides in cell regulation and membrane dynamics. Nature, 443, 651-657.
11. Dove, S.K., Cooke, F.T., Douglas, M.R., Sayers, L.G., Parker, P.J., and Michell, R.H. (1997). Osmotic stress activates phosphatidylinositol-3,5-bisphosphate synthesis. Nature, 390, 187-192.
12. Duex, J.E., Nau, J.J., Kauffman, E.J., and Weisman, L.S. (2006a). Phosphoinositide 5-phosphatase Fig 4p is required for both acute rise and subsequent fall in stress-induced phosphatidylinositol 3,5-bisphosphate levels. Eukaryot Cell, 5, 723-731.
13. Duex, J.E., Tang, F., and Weisman, L.S. (2006b). The Vac14p-Fig4p complex acts independently of Vac7p and couples PI3,5P2 synthesis and turnover. J Cell Biol, 172, 693-704.
14. Efe, J.A., Botelho, R.J., and Emr, S.D. (2007). Atg18 regulates organelle morphology and Fab1 kinase activity independent of its membrane recruitment by phosphatidylinositol 3,5-bisphosphate. Mol Biol Cell, 18, 4232-4244.
15. Eugster, A., Pécheur, E.I., Michel, F., Winsor, B., Letourneur, F., and Friant, S. (2004). Ent5p is required with Ent3p and Vps27p for ubiquitin-dependent protein sorting into the multivesicular body. Mol Biol Cell, 15, 3031-3041.
16. Ford, M.G., Pearse, B.M., Higgins, M.K., Vallis, Y., Owen, D.J., Gibson, A., Hopkins, C.R., Evans, P.R., and McMahon, H.T. (2001). Simultaneous binding of PtdIns(4,5)P2 and clathrin by AP180 in the nucleation of clathrin lattices on membranes. Science, 291, 1051-1055.
17. Friant, S., Pécheur, E.I., Eugster, A., Michel, F., Lefkir, Y., Nourrisson, D., and Letourneur, F. (2003). Ent3p Is a PtdIns(3,5)P2 effector required for protein sorting to the multivesicular body. Dev Cell, 5, 499-511.
18. Gary, J.D., Sato, T.K., Stefan, C.J., Bonangelino, C.J., Weisman, L.S., and Emr, S.D. (2002). Regulation of Fab1 phosphatidylinositol 3-phosphate 5-kinase pathway by Vac7 protein and Fig4, a polyphosphoinositide phosphatase family member. Mol Biol Cell, 13, 1238-1251.
19. Gillooly, D.J., Morrow, I.C., Lindsay, M., Gould, R., Bryant, N.J., Gaullier, J.M., Parton, R.G., and Stenmark, H. (2000). Localization of phosphatidylinositol 3-phosphate in yeast and mammalian cells. EMBO J, 19, 4577-4588.
20. Godi, A., Di Campli, A., Konstantakopoulos, A., Di Tullio, G., Alessi, D.R., Kular, G.S., Daniele, T., Marra, P., Lucocq, J.M., and De Matteis, M.A. (2004). FAPPs control Golgi-to-cell-surface membrane traffic by binding to ARF and PtdIns(4)P. Nat Cell Biol, 6, 393-404.
21. Gozani, O., Karuman, P., Jones, D.R., Ivanov, D., Cha, J., Lugovskoy, A.A., Baird, C.L., Zhu, H., Field, S.J., Lessnick, S.L., Villasenor J., Mehrotra B., Chen J., Rao V.R., Brugge J.S., Ferguson C.G., Payrastre B., Myszka D.G., Cantley L.C., Wagner G., Divecha N., Prestwich GD., and Yuan J. (2003). The PHD finger of the chromatin-associated protein ING2 functions as a nuclear phosphoinositide receptor. Cell, 114, 99-111.
22. Gruenberg, J., and Stenmark, H. (2004). The biogenesis of multivesicular endosomes. Nat Rev Mol Cell Biol, 5, 317-323.
23. Henne, W.M., Buchkovich, N.J., and Emr, S.D. (2011). The ESCRT pathway. Dev Cell, 21, 77-91.
24. Herman, P.K., and Emr, S.D. (1990). Characterization of VPS34, a gene required for vacuolar protein sorting and vacuole segregation in Saccharomyces cerevisiae. Mol Cell Biol, 10, 6742-6754.
25. Hers, I., Vincent, E.E., and Tavare, J.M. (2011). Akt signalling in health and disease. Cell Signal, 23, 1515-1527.
26. Ikonomov, O.C., Sbrissa, D., Delvecchio, K., Xie, Y., Jin, J.P., Rappolee, D., and Shisheva, A. (2011). The phosphoinositide kinase PIKfyve is vital in early embryonic development: preimplantation lethality of PIKfyve-/- embryos but normality of PIKfyve+/- mice. J Biol Chem, 286, 13404-13413.
27. Ikonomov, O.C., Sbrissa, D., Fligger, J., Delvecchio, K., and Shisheva, A. (2010). ArPIKfyve regulates Sac3 protein abundance and turnover: disruption of the mechanism by Sac3I41T mutation causing Charcot-Marie-Tooth 4J disorder. J Biol Chem, 285, 26760-26764.
28. Ishihara, H., Shibasaki, Y., Kizuki, N., Wada, T., Yazaki, Y., Asano, T., and Oka, Y. (1998). Type I phosphatidylinositol-4-phosphate 5-kinases. Cloning of the third isoform and deletion/substitution analysis of members of this novel lipid kinase family. J Biol Chem, 273, 8741-8748.
29. Itoh, T., and Takenawa, T. (2002). Phosphoinositidebinding domains: Functional units for temporal and spatial regulation of intracellular signalling. Cell Signal, 14, 733-743.
30. Jin, N., Chow, C.Y., Liu, L., Zolov, S.N., Bronson, R., Davisson, M., Petersen, J.L., Zhang, Y., Park, S., Duex, J.E., Goldowitz D., Meisler M.H., and Weisman L.S. (2008). VAC14 nucleates a protein complex essential for the acute interconversion of PI3P and PI(3,5)P(2) in yeast and mouse. EMBO J, 27, 3221-3234.
31. Kihara, A., Noda, T., Ishihara, N., and Ohsumi, Y. (2001). Two distinct Vps34 phosphatidylinositol 3-kinase complexes function in autophagy and carboxypeptidase Y sorting in Saccharomyces cerevisiae. J Cell Biol, 152, 519-530.
32. Kimber, W.A., Deak, M., Prescott, A.R., and Alessi, D.R. (2003). Interaction of the protein tyrosine phosphatase PTPL1 with the PtdIns(3,4)P2-binding adaptor protein TAPP1. Biochem J, 376, 525-535.
33. Laporte, J., Bedez, F., Bolino, A., and Mandel, J.L. (2003). Myotubularins, a large disease-associated family of cooperating catalytically active and inactive phospho-inositides phosphatases. Hum Mol Genet, 12 Spec No 2, R285-292.
34. Lecompte, O., Poch, O., and Laporte, J. (2008). PtdIns5P regulation through evolution: roles in membrane trafficking? Trends Biochem Sci, 33, 453-460.
35. Lemmon, M.A. (2003). Phosphoinositide recognition domains. Traffic, 4, 201-213.
36. Levine, T.P., and Munro, S. (2002). Targeting of Golgispecific pleckstrin homology domains involves both PtdIns 4-kinase-dependent and -independent components. Curr Biol, 12, 695-704.
37. Liu, Y., and Bankaitis, V.A. (2010). Phosphoinositide phosphatases in cell biology and disease. Prog Lipid Res, 49, 201-217.
38. Marcus, A.J., Ullman, H.L., and Safier, L.B. (1969). Lipid composition of subcellular particles of human blood platelets. J Lipid Res, 10, 108-114.
39. Milne, S.B., Ivanova, P.T., DeCamp, D., Hsueh, R.C., and Brown, H.A. (2005). A targeted mass spectrometric analysis of phosphatidylinositol phosphate species. J Lipid Res, 46, 1796-1802.
40. Mizuno-Yamasaki, E., Medkova, M., Coleman, J., and Novick, P. (2010). Phosphatidylinositol 4-phosphate controls both membrane recruitment and a regulatory switch of the Rab GEF Sec2p. Dev Cell, 18, 828-840.
41. Nikawa, J., and Yamashita, S. (1984). Molecular cloning of the gene encoding CDPdiacylglycerol-inositol 3-phosphatidyl transferase in Saccharomyces cerevisiae. Eur J Biochem, 143, 251-256.
42. Odorizzi, G., Babst, M., and Emr, S.D. (1998). Fab1p PtdIns(3)P 5-kinase function essential for protein sorting in the multivesicular body. Cell, 95, 847-858.
43. Panaretou, C., Domin, J., Cockcroft, S., and Waterfield, M.D. (1997). Characterization of p150, an adaptor protein for the human phosphatidylinositol (PtdIns) 3-kinase. Substrate presentation by phosphatidylinositol transfer protein to the p150.Ptdins 3-kinase complex. J Biol Chem, 272, 2477-2485.
44. Parrish, W.R., Stefan, C.J., and Emr, S.D. (2004). Essential role for the myotubularin-related phosphatase Ymr1p and the synaptojanin-like phosphatases Sjl2p and Sjl3p in regulation of phosphatidylinositol 3-phosphate in yeast. Mol Biol Cell, 15, 3567-3579.
45. Payrastre, B., Missy, K., Giuriato, S., Bodin, S., Plantavid, M., and Gratacap, M. (2001). Phosphoinositides: key players in cell signalling, in time and space. Cell Signal, 13, 377-387.
46. Rameh, L.E., Tolias, K.F., Duckworth, B.C., and Cantley, L.C. (1997). A new pathway for synthesis of phosphatidylinositol-4,5-bisphosphate. Nature, 390, 192-196.
47. Sbrissa, D., Ikonomov, O.C., Deeb, R., and Shisheva, A. (2002). Phosphatidylinositol 5-phosphate biosynthesis is linked to PIKfyve and is involved in osmotic response pathway in mammalian cells. J Biol Chem, 277, 47276-47284.
48. Schu, P.V., Takegawa, K., Fry, M.J., Stack, J.H., Waterfield, M.D., and Emr, S.D. (1993). Phosphatidylinositol 3-kinase encoded by yeast VPS34 gene essential for protein sorting. Science, 260, 88-91.
49. Shisheva, A. (2008). PIKfyve: Partners, significance, debates and paradoxes. Cell Biol Int, 32, 591-604.
50. Slessareva, J.E., Routt, S.M., Temple, B., Bankaitis, V.A., and Dohlman, H.G. (2006). Activation of the phosphatidylinositol 3-kinase Vps34 by a G protein alpha subunit at the endosome. Cell, 126, 191-203.
51. Spector, A.A., and Yorek, M.A. (1985). Membrane lipid composition and cellular function. J Lipid Res, 26, 1015-1035.
52. Sun, Y., Carroll, S., Kaksonen, M., Toshima, J.Y., and Drubin, D.G. (2007). PtdIns(4,5)P2 turnover is required for multiple stages during clathrin- and actin-dependent endocytic internalization. J Cell Biol, 177, 355-367.
53. Taylor, G.S., Maehama, T., and Dixon, J.E. (2000). Inaugural article: myotubularin, a protein tyrosine phosphatase mutated in myotubular myopathy, dephosphorylates the lipid second messenger, phosphatidylinositol 3-phosphate. Proc Natl Acad Sci USA, 97, 8910-8915.
54. Trevelyan, W.E. (1966). Preparation of phosphatidyl inositol from baker's yeast. J Lipid Res, 7, 445-447.
55. Vanhaesebroeck, B., Leevers, S.J., Ahmadi, K., Timms, J., Katso, R., Driscoll, P.C., Woscholski, R., Parker, P.J., and Waterfield, M.D. (2001). Synthesis and function of 3-phosphorylated inositol lipids. Annu Rev Biochem, 70, 535-602.
56. Yamamoto, A., DeWald, D.B., Boronenkov, I.V., Anderson, R.A., Emr, S.D., and Koshland, D. (1995). Novel PI(4)P 5-kinase homologue, Fab1p, essential for normal vacuole function and morphology in yeast. Mol Biol Cell, 6, 525-539.
57. Zinser, E., Sperka-Gottlieb, C.D., Fasch, E.V., Kohlwein, S.D., Paltauf, F., and Daum, G. (1991). Phospholipid synthesis and lipid composition of subcellular membranes in the unicellular eukaryote Saccharomyces cerevisiae. J Bacteriol, 173, 2026-2034.