-
1
-
-
35348968286
-
The Human Microbiome Project
-
Turnbaugh, P.J.; Ley, R.E.; Hamady, M.; Fraser-Liggett, C.M.; Knight, R.; Gordon, J.I. The Human Microbiome Project. Nature 2007, 449, 804-810.
-
(2007)
Nature
, vol.449
, pp. 804-810
-
-
Turnbaugh, P.J.1
Ley, R.E.2
Hamady, M.3
Fraser-Liggett, C.M.4
Knight, R.5
Gordon, J.I.6
-
2
-
-
27444438599
-
The microbial pan-genome
-
Medini, D.; Donati, C.; Tettelin, H.; Masignani, V.; Rappuoli, R. The microbial pan-genome. Curr. Opin. Genet. Dev. 2005, 15, 589-594.
-
(2005)
Curr. Opin. Genet. Dev
, vol.15
, pp. 589-594
-
-
Medini, D.1
Donati, C.2
Tettelin, H.3
Masignani, V.4
Rappuoli, R.5
-
3
-
-
77957357555
-
The Human Oral Microbiome
-
Dewhirst, F.E.; Chen, T.; Izard, J.; Paster, B.J.; Tanner, A.C.R.; Yu, W.-H.; Lakshmanan, A.; Wade, W.G. The Human Oral Microbiome. J. Bacteriol. 2010, 192, 5002-5017.
-
(2010)
J. Bacteriol
, vol.192
, pp. 5002-5017
-
-
Dewhirst, F.E.1
Chen, T.2
Izard, J.3
Paster, B.J.4
Tanner, A.C.R.5
Yu, W.-H.6
Lakshmanan, A.7
Wade, W.G.8
-
4
-
-
84958901557
-
Geographical patterns of the standing and active human gut microbiome in health and IBD
-
Rehman, A.; Rausch, P.; Wang, J.; Skieceviciene, J.; Kiudelis, G.; Bhagalia, K.; Amarapurkar, D.; Kupcinskas, L.; Schreiber, S.; Rosenstiel, P.; et al. Geographical patterns of the standing and active human gut microbiome in health and IBD. Gut 2015, doi:10.1136/gutjnl-2014-308341.
-
(2015)
Gut
-
-
Rehman, A.1
Rausch, P.2
Wang, J.3
Skieceviciene, J.4
Kiudelis, G.5
Bhagalia, K.6
Amarapurkar, D.7
Kupcinskas, L.8
Schreiber, S.9
Rosenstiel, P.10
-
5
-
-
83755222630
-
Microbial Eukaryotes in the Human Microbiome: Ecology, Evolution, and Future Directions
-
Parfrey, L.W.; Walters, W.A.; Knight, R. Microbial Eukaryotes in the Human Microbiome: Ecology, Evolution, and Future Directions. Front. Microbiol. 2011, 2, doi:10.3389/ fmicb.2011.00153.
-
(2011)
Front. Microbiol
, vol.2
-
-
Parfrey, L.W.1
Walters, W.A.2
Knight, R.3
-
6
-
-
84859885188
-
Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome
-
Pride, D.T.; Salzman, J.; Haynes, M.; Rohwer, F.; Davis-Long, C.; White, R.A.; Loomer, P.; Armitage, G.C.; Relman, D.A. Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome. ISME J. 2012, 6, 915-926.
-
(2012)
ISME J
, vol.6
, pp. 915-926
-
-
Pride, D.T.1
Salzman, J.2
Haynes, M.3
Rohwer, F.4
Davis-Long, C.5
White, R.A.6
Loomer, P.7
Armitage, G.C.8
Relman, D.A.9
-
7
-
-
33747073504
-
Microbial diversity in the deep sea and the underexplored "rare biosphere
-
Sogin, M.L.; Morrison, H.G.; Huber, J.A.; Welch, D.M.; Huse, S.M.; Neal, P.R.; Arrieta, J.M.; Herndl, G.J. Microbial diversity in the deep sea and the underexplored "rare biosphere". Proc. Natl. Acad. Sci. USA 2006, 103, 12115-12120.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 12115-12120
-
-
Sogin, M.L.1
Morrison, H.G.2
Huber, J.A.3
Welch, D.M.4
Huse, S.M.5
Neal, P.R.6
Arrieta, J.M.7
Herndl, G.J."8
-
8
-
-
84930925914
-
Temporal patterns of rarity provide a more complete view of microbial diversity
-
Shade, A.; Gilbert, J.A. Temporal patterns of rarity provide a more complete view of microbial diversity. Trends Microbiol. 2015, doi:10.1016/j.tim.2015.01.007.
-
(2015)
Trends Microbiol
-
-
Shade, A.1
Gilbert, J.A.2
-
9
-
-
84861857263
-
Methanogenic Archaea and oral infections-ways to unravel the black box
-
Horz, H.-P.; Conrads, G. Methanogenic Archaea and oral infections-ways to unravel the black box. J. Oral Microbiol. 2011, 3, doi:10.3402/jom.v3i0.5940.
-
(2011)
J. Oral Microbiol
, vol.3
-
-
Horz, H.-P.1
Conrads, G.2
-
10
-
-
0020045701
-
Isolation of Methanobrevibacter smithii from human feces
-
Miller, T.L.; Wolin, M.J.; de Macario, E.C.; Macario, A.J. Isolation of Methanobrevibacter smithii from human feces. Appl. Environ. Microbiol. 1982, 43, 227-232.
-
(1982)
Appl. Environ. Microbiol
, vol.43
, pp. 227-232
-
-
Miller, T.L.1
Wolin, M.J.2
de McArio, E.C.3
McArio, A.J.4
-
11
-
-
30744456055
-
The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis
-
Fricke, W.F.; Seedorf, H.; Henne, A.; Krüer, M.; Liesegang, H.; Hedderich, R.; Gottschalk, G.; Thauer, R.K. The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis. J. Bacteriol. 2006, 188, 642-658.
-
(2006)
J. Bacteriol
, vol.188
, pp. 642-658
-
-
Fricke, W.F.1
Seedorf, H.2
Henne, A.3
Krüer, M.4
Liesegang, H.5
Hedderich, R.6
Gottschalk, G.7
Thauer, R.K.8
-
12
-
-
0028242584
-
Isolation and characterization ofMethanobrevibacter oralis sp. nov
-
Ferrari, A.; Brusa, T.; Rutili, A.; Canzi, E.; Biavati, B. Isolation and characterization ofMethanobrevibacter oralis sp. nov. Curr. Microbiol. 1994, 29, 7-12.
-
(1994)
Curr. Microbiol
, vol.29
, pp. 7-12
-
-
Ferrari, A.1
Brusa, T.2
Rutili, A.3
Canzi, E.4
Biavati, B.5
-
13
-
-
0025300402
-
Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya
-
Woese, C.R.; Kandler, O.; Wheelis, M.L. Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya. Proc. Natl. Acad. Sci. USA 1990, 87, 4576-4579.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
14
-
-
0023930214
-
Methanogenic bacteria from human dental plaque
-
Belay, N.; Johnson, R.; Rajagopal, B.S.; de Macario, E.C.; Daniels, L. Methanogenic bacteria from human dental plaque. Appl. Environ. Microbiol. 1988, 54, 600-603.
-
(1988)
Appl. Environ. Microbiol
, vol.54
, pp. 600-603
-
-
Belay, N.1
Johnson, R.2
Rajagopal, B.S.3
de McArio, E.C.4
Daniels, L.5
-
15
-
-
0025331850
-
Methanogenic bacteria in human vaginal samples
-
Belay, N.; Mukhopadhyay, B.; de Macario, E.C.; Galask, R.; Daniels, L. Methanogenic bacteria in human vaginal samples. J. Clin. Microbiol. 1990, 28, 1666-1668.
-
(1990)
J. Clin. Microbiol
, vol.28
, pp. 1666-1668
-
-
Belay, N.1
Mukhopadhyay, B.2
de McArio, E.C.3
Galask, R.4
Daniels, L.5
-
16
-
-
84877024737
-
Breath methane positivity is more common and higher in patients with objectively proven delayed transit constipation
-
Lee, K.-M.; Paik, C.-N.; Chung, W.C.; Yang, J.-M.; Choi, M.-G. Breath methane positivity is more common and higher in patients with objectively proven delayed transit constipation. Eur. J. Gastroenterol. Hepatol. 2013, 25, 726-732.
-
(2013)
Eur. J. Gastroenterol. Hepatol
, vol.25
, pp. 726-732
-
-
Lee, K.-M.1
Paik, C.-N.2
Chung, W.C.3
Yang, J.-M.4
Choi, M.-G.5
-
17
-
-
0022530856
-
Incidence of methanogenic bacteria in a sigmoidoscopy population: An association of methanogenic bacteria and diverticulosis
-
Weaver, G.A.; Krause, J.A.; Miller, T.L.; Wolin, M.J. Incidence of methanogenic bacteria in a sigmoidoscopy population: An association of methanogenic bacteria and diverticulosis. Gut 1986, 27, 698-704.
-
(1986)
Gut
, vol.27
, pp. 698-704
-
-
Weaver, G.A.1
Krause, J.A.2
Miller, T.L.3
Wolin, M.J.4
-
18
-
-
0017701280
-
Breath-methane in patients with cancer of the large bowel
-
Haines, A.; Dilawari, J.; Metz, G.; Blendis, L.; Wiggins, H. Breath-methane in patients with cancer of the large bowel. The Lancet 1977, 310, 481-483.
-
(1977)
The Lancet
, vol.310
, pp. 481-483
-
-
Haines, A.1
Dilawari, J.2
Metz, G.3
Blendis, L.4
Wiggins, H.5
-
19
-
-
60549086580
-
Human gut microbiota in obesity and after gastric bypass
-
Zhang, H.; DiBaise, J.K.; Zuccolo, A.; Kudrna, D.; Braidotti, M.; Yu, Y.; Parameswaran, P.; Crowell, M.D.; Wing, R.; Rittmann, B.E.; Krajmalnik-Brown, R. Human gut microbiota in obesity and after gastric bypass. Proc. Natl. Acad. Sci. USA 2009, 106, 2365-2370.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 2365-2370
-
-
Zhang, H.1
DiBaise, J.K.2
Zuccolo, A.3
Kudrna, D.4
Braidotti, M.5
Yu, Y.6
Parameswaran, P.7
Crowell, M.D.8
Wing, R.9
Rittmann, B.E.10
Krajmalnik-Brown, R.11
-
20
-
-
0021214305
-
Methane production and colon cancer
-
Piqué, J.M.; Pallarés, M.; Cusó, E.; Vilar-Bonet, J.; Gassull, M.A. Methane production and colon cancer. Gastroenterology 1984, 87, 601-605.
-
(1984)
Gastroenterology
, vol.87
, pp. 601-605
-
-
Piqué, J.M.1
Pallarés, M.2
Cusó, E.3
Vilar-Bonet, J.4
Gassull, M.A.5
-
21
-
-
58649098940
-
Methanogenic archaea in health and disease: A novel paradigm of microbial pathogenesis
-
Conwaydemacario, E.; Macario, A. Methanogenic archaea in health and disease: A novel paradigm of microbial pathogenesis. Int. J. Med. Microbiol. 2009, 299, 99-108.
-
(2009)
Int. J. Med. Microbiol
, vol.299
, pp. 99-108
-
-
Conwaydemacario, E.1
McArio, A.2
-
22
-
-
1942469363
-
Methanogenic Archaea and human periodontal disease
-
Lepp, P.W.; Brinig, M.M.; Ouverney, C.C.; Palm, K.; Armitage, G.C.; Relman, D.A. Methanogenic Archaea and human periodontal disease. Proc. Natl. Acad. Sci. USA 2004, 101, 6176-6181.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 6176-6181
-
-
Lepp, P.W.1
Brinig, M.M.2
Ouverney, C.C.3
Palm, K.4
Armitage, G.C.5
Relman, D.A.6
-
23
-
-
33645912595
-
Identification and Quantification of Archaea Involved in Primary Endodontic Infections
-
Vianna, M.E.; Conrads, G.; Gomes, B.P.F.A.; Horz, H.P. Identification and Quantification of Archaea Involved in Primary Endodontic Infections. J. Clin. Microbiol. 2006, 44, 1274-1282.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 1274-1282
-
-
Vianna, M.E.1
Conrads, G.2
Gomes, B.P.F.A.3
Horz, H.P.4
-
24
-
-
47049110230
-
Quantitative Analysis of Three Hydrogenotrophic Microbial Groups, Methanogenic Archaea, Sulfate-Reducing Bacteria, and Acetogenic Bacteria, within Plaque Biofilms Associated with Human Periodontal Disease
-
Vianna, M.E.; Holtgraewe, S.; Seyfarth, I.; Conrads, G.; Horz, H.P. Quantitative Analysis of Three Hydrogenotrophic Microbial Groups, Methanogenic Archaea, Sulfate-Reducing Bacteria, and Acetogenic Bacteria, within Plaque Biofilms Associated with Human Periodontal Disease. J. Bacteriol. 2008, 190, 3779-3785.
-
(2008)
J. Bacteriol
, vol.190
, pp. 3779-3785
-
-
Vianna, M.E.1
Holtgraewe, S.2
Seyfarth, I.3
Conrads, G.4
Horz, H.P.5
-
25
-
-
79952145194
-
The Discussion Goes on: What Is the Role of Euryarchaeota in Humans
-
Horz, H.-P.; Conrads, G. The Discussion Goes on: What Is the Role of Euryarchaeota in Humans? Archaea 2010, 2010, 1-8.
-
(2010)
Archaea
, vol.2010
, pp. 1-8
-
-
Horz, H.-P.1
Conrads, G.2
-
26
-
-
47549119041
-
Methanogenic archaea: Ecologically relevant differences in energy conservation
-
Thauer, R.K.; Kaster, A.-K.; Seedorf, H.; Buckel, W.; Hedderich, R. Methanogenic archaea: Ecologically relevant differences in energy conservation. Nat. Rev. Microbiol. 2008, 6, 579-591.
-
(2008)
Nat. Rev. Microbiol
, vol.6
, pp. 579-591
-
-
Thauer, R.K.1
Kaster, A.-K.2
Seedorf, H.3
Buckel, W.4
Hedderich, R.5
-
27
-
-
0030871461
-
Energetics of syntrophic cooperation in methanogenic degradation
-
Schink, B. Energetics of syntrophic cooperation in methanogenic degradation. Microbiol. Mol. Biol. Rev. 1997, 61, 262-280.
-
(1997)
Microbiol. Mol. Biol. Rev
, vol.61
, pp. 262-280
-
-
Schink, B.1
-
28
-
-
0037308245
-
Archaea and Their Potential Role in Human Disease
-
Eckburg, P.B.; Lepp, P.W.; Relman, D.A. Archaea and Their Potential Role in Human Disease. Infect. Immun. 2003, 71, 591-596.
-
(2003)
Infect. Immun
, vol.71
, pp. 591-596
-
-
Eckburg, P.B.1
Lepp, P.W.2
Relman, D.A.3
-
29
-
-
0242720403
-
Pathogenic archaea: Do they exist
-
Cavicchioli, R.; Curmi, P.M.G.; Saunders, N.; Thomas, T. Pathogenic archaea: Do they exist? BioEssays 2003, 25, 1119-1128.
-
(2003)
BioEssays
, vol.25
, pp. 1119-1128
-
-
Cavicchioli, R.1
Curmi, P.M.G.2
Saunders, N.3
Thomas, T.4
-
30
-
-
85027927719
-
Enterotypes of the human gut microbiome
-
Arumugam, M.; Raes, J.; Pelletier, E.; Le Paslier, D.; Yamada, T.; Mende, D.R.; Fernandes, G.R.; Tap, J.; Bruls, T.; Batto, J.-M.; et al. Enterotypes of the human gut microbiome. Nature 2011, 473, 174-180.
-
(2011)
Nature
, vol.473
, pp. 174-180
-
-
Arumugam, M.1
Raes, J.2
Pelletier, E.3
Le Paslier, D.4
Yamada, T.5
Mende, D.R.6
Fernandes, G.R.7
Tap, J.8
Bruls, T.9
Batto, J.-M.10
-
31
-
-
84865180569
-
Categorization of the gut microbiota: Enterotypes or gradients
-
Jeffery, I.B.; Claesson, M.J.; O'Toole, P.W.; Shanahan, F. Categorization of the gut microbiota: enterotypes or gradients? Nat. Rev. Microbiol. 2012, 10, 591-592.
-
(2012)
Nat. Rev. Microbiol
, vol.10
, pp. 591-592
-
-
Jeffery, I.B.1
Claesson, M.J.2
O'Toole, P.W.3
Shanahan, F.4
-
32
-
-
82355180998
-
The archaeal "TACK" superphylum and the origin of eukaryotes
-
Guy, L.; Ettema, T.J.G. The archaeal "TACK" superphylum and the origin of eukaryotes. Trends Microbiol. 2011, 19, 580-587.
-
(2011)
Trends Microbiol
, vol.19
, pp. 580-587
-
-
Guy, L.1
Ettema, T.J.G.2
-
33
-
-
84924406832
-
Rooting the Domain Archaea by Phylogenomic Analysis Supports the Foundation of the New Kingdom Proteoarchaeota
-
Petitjean, C.; Deschamps, P.; Lopez-Garcia, P.; Moreira, D. Rooting the Domain Archaea by Phylogenomic Analysis Supports the Foundation of the New Kingdom Proteoarchaeota. Genome Biol. Evol. 2015, 7, 191-204.
-
(2015)
Genome Biol. Evol
, vol.7
, pp. 191-204
-
-
Petitjean, C.1
Deschamps, P.2
Lopez-Garcia, P.3
Moreira, D.4
-
34
-
-
84912557953
-
Archaea and the human gut: New beginning of an old story
-
Gaci, N.; Borrel, G.; Tottey, W.; O'Toole, P.W.; Brugère, J.-F. Archaea and the human gut: New beginning of an old story. World J. Gastroenterol. 2014, 20, 16062.
-
(2014)
World J. Gastroenterol
, vol.20
, pp. 16062
-
-
Gaci, N.1
Borrel, G.2
Tottey, W.3
O'Toole, P.W.4
Brugère, J.-F.5
-
35
-
-
44849095951
-
Human methanogen diversity and incidence in healthy and diseased colonic groups using mcrA gene analysis
-
Scanlan, P.D.; Shanahan, F.; Marchesi, J.R. Human methanogen diversity and incidence in healthy and diseased colonic groups using mcrA gene analysis. BMC Microbiol. 2008, 8, doi:10.1186/ 1471-2180-8-79.
-
(2008)
BMC Microbiol
, vol.8
-
-
Scanlan, P.D.1
Shanahan, F.2
Marchesi, J.R.3
-
36
-
-
52349091138
-
A putative new order of methanogenic Archaea inhabiting the human gut, as revealed by molecular analyses of the mcrA gene
-
Mihajlovski, A.; Alric, M.; Brugère, J.-F. A putative new order of methanogenic Archaea inhabiting the human gut, as revealed by molecular analyses of the mcrA gene. Res. Microbiol. 2008, 159, 516-521.
-
(2008)
Res. Microbiol
, vol.159
, pp. 516-521
-
-
Mihajlovski, A.1
Alric, M.2
Brugère, J.-F.3
-
37
-
-
78649715888
-
Molecular evaluation of the human gut methanogenic archaeal microbiota reveals an age-associated increase of the diversity
-
Mihajlovski, A.; Doré, J.; Levenez, F.; Alric, M.; Brugère, J.-F. Molecular evaluation of the human gut methanogenic archaeal microbiota reveals an age-associated increase of the diversity. Environ. Microbiol. Rep. 2010, 2, 272-280.
-
(2010)
Environ. Microbiol. Rep
, vol.2
, pp. 272-280
-
-
Mihajlovski, A.1
Doré, J.2
Levenez, F.3
Alric, M.4
Brugère, J.-F.5
-
38
-
-
67649205482
-
Prevalence and molecular diversity of Archaea in subgingival pockets of periodontitis patients
-
Li, C.L.; Liu, D.L.; Jiang, Y.T.; Zhou, Y.B.; Zhang, M.Z.; Jiang, W.; Liu, B.; Liang, J.P. Prevalence and molecular diversity of Archaea in subgingival pockets of periodontitis patients. Oral Microbiol. Immunol. 2009, 24, 343-346.
-
(2009)
Oral Microbiol. Immunol
, vol.24
, pp. 343-346
-
-
Li, C.L.1
Liu, D.L.2
Jiang, Y.T.3
Zhou, Y.B.4
Zhang, M.Z.5
Jiang, W.6
Liu, B.7
Liang, J.P.8
-
39
-
-
84861909621
-
McrA and 16S rRNA gene analysis suggests a novel lineage of Archaea phylogenetically affiliated with Thermoplasmatales in human subgingival plaque
-
Horz, H.-P.; Seyfarth, I.; Conrads, G. McrA and 16S rRNA gene analysis suggests a novel lineage of Archaea phylogenetically affiliated with Thermoplasmatales in human subgingival plaque. Anaerobe 2012, 18, 373-377.
-
(2012)
Anaerobe
, vol.18
, pp. 373-377
-
-
Horz, H.-P.1
Seyfarth, I.2
Conrads, G.3
-
40
-
-
57749205957
-
Intra-individual diversity and similarity of salivary and faecal microbiota
-
Maukonen, J.; Mättö, J.; Suihko, M.-L.; Saarela, M. Intra-individual diversity and similarity of salivary and faecal microbiota. J. Med. Microbiol. 2008, 57, 1560-1568.
-
(2008)
J. Med. Microbiol
, vol.57
, pp. 1560-1568
-
-
Maukonen, J.1
Mättö, J.2
Suihko, M.-L.3
Saarela, M.4
-
41
-
-
34547683600
-
Diversity of the human gastrointestinal tract microbiota revisited
-
Rajilic-Stojanovic, M.; Smidt, H.; de Vos, W.M. Diversity of the human gastrointestinal tract microbiota revisited. Environ. Microbiol. 2007, 9, 2125-2136.
-
(2007)
Environ. Microbiol
, vol.9
, pp. 2125-2136
-
-
Rajilic-Stojanovic, M.1
Smidt, H.2
de Vos, W.M.3
-
42
-
-
84864677092
-
Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces
-
Dridi, B.; Fardeau, M.-L.; Ollivier, B.; Raoult, D.; Drancourt, M. Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces. Int. J. Syst. Evol. Microbiol. 2012, 62, 1902-1907.
-
(2012)
Int. J. Syst. Evol. Microbiol
, vol.62
, pp. 1902-1907
-
-
Dridi, B.1
Fardeau, M.-L.2
Ollivier, B.3
Raoult, D.4
Drancourt, M.5
-
43
-
-
84997703582
-
Genome Sequence of "Candidatus Methanomassiliicoccus intestinalis" Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon from Human Feces
-
Borrel, G.; Harris, H.M.B.; Parisot, N.; Gaci, N.; Tottey, W.; Mihajlovski, A.; Deane, J.; Gribaldo, S.; Bardot, O.; Peyretaillade, E.; et al. Genome Sequence of "Candidatus Methanomassiliicoccus intestinalis" Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon from Human Feces. Genome Announc. 2013, 1, doi:10.1128/genomeA.00453-13.
-
(2013)
Genome Announc
, vol.1
-
-
Borrel, G.1
Harris, H.M.B.2
Parisot, N.3
Gaci, N.4
Tottey, W.5
Mihajlovski, A.6
Deane, J.7
Gribaldo, S.8
Bardot, O.9
Peyretaillade, E.10
-
44
-
-
84870675165
-
Genome sequence of "Candidatus Methanomethylophilus alvus" Mx1201, a methanogenic archaeon from the human gut belonging to a seventh order of methanogens
-
Borrel, G.; Harris, H.M.B.; Tottey, W.; Mihajlovski, A.; Parisot, N.; Peyretaillade, E.; Peyret, P.; Gribaldo, S.; O'Toole, P.W.; Brugère, J.-F. Genome sequence of "Candidatus Methanomethylophilus alvus" Mx1201, a methanogenic archaeon from the human gut belonging to a seventh order of methanogens. J. Bacteriol. 2012, 194, 6944-6945.
-
(2012)
J. Bacteriol
, vol.194
, pp. 6944-6945
-
-
Borrel, G.1
Harris, H.M.B.2
Tottey, W.3
Mihajlovski, A.4
Parisot, N.5
Peyretaillade, E.6
Peyret, P.7
Gribaldo, S.8
O'Toole, P.W.9
Brugère, J.-F.10
-
45
-
-
84906924522
-
Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine
-
Borrel, G.; Parisot, N.; Harris, H.M.B.; Peyretaillade, E.; Gaci, N.; Tottey, W.; Bardot, O.; Raymann, K.; Gribaldo, S.; Peyret, P.; O'Toole, P.W.; Brugère, J.-F. Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine. BMC Genomics 2014, 15, 679.
-
(2014)
BMC Genomics
, vol.15
, pp. 679
-
-
Borrel, G.1
Parisot, N.2
Harris, H.M.B.3
Peyretaillade, E.4
Gaci, N.5
Tottey, W.6
Bardot, O.7
Raymann, K.8
Gribaldo, S.9
Peyret, P.10
O'Toole, P.W.11
Brugère, J.-F.12
-
46
-
-
84890110026
-
Phylogenomic data support a seventh order of Methylotrophic methanogens and provide insights into the evolution of Methanogenesis
-
Borrel, G.; O'Toole, P.W.; Harris, H.M.B.; Peyret, P.; Brugère, J.-F.; Gribaldo, S. Phylogenomic data support a seventh order of Methylotrophic methanogens and provide insights into the evolution of Methanogenesis. Genome Biol. Evol. 2013, 5, 1769-1780.
-
(2013)
Genome Biol. Evol
, vol.5
, pp. 1769-1780
-
-
Borrel, G.1
O'Toole, P.W.2
Harris, H.M.B.3
Peyret, P.4
Brugère, J.-F.5
Gribaldo, S.6
-
47
-
-
84896859974
-
Unique Characteristics of the Pyrrolysine System in the 7th Order of Methanogens: Implications for the Evolution of a Genetic Code Expansion Cassette
-
Borrel, G.; Gaci, N.; Peyret, P.; O'Toole, P.W.; Gribaldo, S.; Brugère, J.-F. Unique Characteristics of the Pyrrolysine System in the 7th Order of Methanogens: Implications for the Evolution of a Genetic Code Expansion Cassette. Archaea 2014, 2014, 1-11.
-
(2014)
Archaea
, vol.2014
, pp. 1-11
-
-
Borrel, G.1
Gaci, N.2
Peyret, P.3
O'Toole, P.W.4
Gribaldo, S.5
Brugère, J.-F.6
-
48
-
-
85052274144
-
Archaebiotics: Proposed therapeutic use of archaea to prevent trimethylaminuria and cardiovascular disease
-
Brugère, J.-F.; Borrel, G.; Gaci, N.; Tottey, W.; O'Toole, P.W.; Malpuech-Brugère, C. Archaebiotics: Proposed therapeutic use of archaea to prevent trimethylaminuria and cardiovascular disease. Gut Microbes 2014, 5, 5-10.
-
(2014)
Gut Microbes
, vol.5
, pp. 5-10
-
-
Brugère, J.-F.1
Borrel, G.2
Gaci, N.3
Tottey, W.4
O'Toole, P.W.5
Malpuech-Brugère, C.6
-
49
-
-
0033029263
-
Dietary precursors of trimethylamine in man: A pilot study
-
Zhang, A.Q.; Mitchell, S.C.; Smith, R.L. Dietary precursors of trimethylamine in man: A pilot study. Food Chem. Toxicol. 1999, 37, 515-520.
-
(1999)
Food Chem. Toxicol
, vol.37
, pp. 515-520
-
-
Zhang, A.Q.1
Mitchell, S.C.2
Smith, R.L.3
-
50
-
-
84877331372
-
Intestinal microbiota metabolism of L-carnitine, a nutrient in red meat, promotes atherosclerosis
-
Koeth, R.A.; Wang, Z.; Levison, B.S.; Buffa, J.A.; Org, E.; Sheehy, B.T.; Britt, E.B.; Fu, X.; Wu, Y.; Li, L.; et al. Intestinal microbiota metabolism of L-carnitine, a nutrient in red meat, promotes atherosclerosis. Nat. Med. 2013, 19, 576-585.
-
(2013)
Nat. Med
, vol.19
, pp. 576-585
-
-
Koeth, R.A.1
Wang, Z.2
Levison, B.S.3
Buffa, J.A.4
Org, E.5
Sheehy, B.T.6
Britt, E.B.7
Fu, X.8
Wu, Y.9
Li, L.10
-
51
-
-
84898859680
-
Prognostic value of choline and betaine depends on intestinal microbiota-generated metabolite trimethylamine-N-oxide
-
Wang, Z.; Tang, W.H.W.; Buffa, J.A.; Fu, X.; Britt, E.B.; Koeth, R.A.; Levison, B.S.; Fan, Y.; Wu, Y.; Hazen, S.L. Prognostic value of choline and betaine depends on intestinal microbiota-generated metabolite trimethylamine-N-oxide. Eur. Heart J. 2014, 35, 904-910.
-
(2014)
Eur. Heart J
, vol.35
, pp. 904-910
-
-
Wang, Z.1
Tang, W.H.W.2
Buffa, J.A.3
Fu, X.4
Britt, E.B.5
Koeth, R.A.6
Levison, B.S.7
Fan, Y.8
Wu, Y.9
Hazen, S.L.10
-
53
-
-
39149118031
-
Mesophilic Crenarchaeota: Proposal for a third archaeal phylum, the
-
Brochier-Armanet, C.; Boussau, B.; Gribaldo, S.; Forterre, P. Mesophilic Crenarchaeota: Proposal for a third archaeal phylum, the Thaumarchaeota. Nat. Rev. Microbiol. 2008, 6, 245-252.
-
(2008)
Thaumarchaeota. Nat. Rev. Microbiol
, vol.6
, pp. 245-252
-
-
Brochier-Armanet, C.1
Boussau, B.2
Gribaldo, S.3
Forterre, P.4
-
55
-
-
79957574938
-
Moving pictures of the human microbiome
-
Caporaso, J.G.; Lauber, C.L.; Costello, E.K.; Berg-Lyons, D.; Gonzalez, A.; Stombaugh, J.; Knights, D.; Gajer, P.; Ravel, J.; Fierer, N.; et al. Moving pictures of the human microbiome. Genome Biol. 2011, 12, doi:10.1186/gb-2011-12-5-r50.
-
(2011)
Genome Biol
, vol.12
-
-
Caporaso, J.G.1
Lauber, C.L.2
Costello, E.K.3
Berg-Lyons, D.4
Gonzalez, A.5
Stombaugh, J.6
Knights, D.7
Gajer, P.8
Ravel, J.9
Fierer, N.10
-
56
-
-
84879148662
-
Archaea and fungi of the human gut microbiome: Correlations with diet and bacterial residents
-
Hoffmann, C.; Dollive, S.; Grunberg, S.; Chen, J.; Li, H.; Wu, G.D.; Lewis, J.D.; Bushman, F.D. Archaea and fungi of the human gut microbiome: Correlations with diet and bacterial residents. PLoS ONE 2013, 8, e66019.
-
(2013)
PLoS ONE
, vol.8
-
-
Hoffmann, C.1
Dollive, S.2
Grunberg, S.3
Chen, J.4
Li, H.5
Wu, G.D.6
Lewis, J.D.7
Bushman, F.D.8
-
57
-
-
25644435673
-
Isolation of an autotrophic ammonia-oxidizing marine archaeon
-
Könneke, M.; Bernhard, A.E.; de la Torre, J.R.; Walker, C.B.; Waterbury, J.B.; Stahl, D.A. Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature 2005, 437, 543-546.
-
(2005)
Nature
, vol.437
, pp. 543-546
-
-
Könneke, M.1
Bernhard, A.E.2
de la Torre, J.R.3
Walker, C.B.4
Waterbury, J.B.5
Stahl, D.A.6
-
58
-
-
26844541457
-
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
-
Francis, C.A.; Roberts, K.J.; Beman, J.M.; Santoro, A.E.; Oakley, B.B. Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc. Natl. Acad. Sci. USA 2005, 102, 14683-14688.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 14683-14688
-
-
Francis, C.A.1
Roberts, K.J.2
Beman, J.M.3
Santoro, A.E.4
Oakley, B.B.5
-
59
-
-
0031945225
-
Cell wall polymers in Archaea (Archaebacteria
-
Kandler, O.; König, H. Cell wall polymers in Archaea (Archaebacteria). Cell. Mol. Life Sci. 1998, 54, 305-308.
-
(1998)
Cell. Mol. Life Sci
, vol.54
, pp. 305-308
-
-
Kandler, O.1
König, H.2
-
60
-
-
0017806024
-
Chemical composition of the peptidoglycan-free cell walls of methanogenic bacteria
-
Kandler, O.; König, H. Chemical composition of the peptidoglycan-free cell walls of methanogenic bacteria. Arch. Microbiol. 1978, 118, 141-152.
-
(1978)
Arch. Microbiol
, vol.118
, pp. 141-152
-
-
Kandler, O.1
König, H.2
-
61
-
-
70349408423
-
High prevalence of Methanobrevibacter smithii and Methanosphaera stadtmanae detected in the human gut using an improved DNA detection protocol
-
Dridi, B.; Henry, M.; El Khéchine, A.; Raoult, D.; Drancourt, M. High prevalence of Methanobrevibacter smithii and Methanosphaera stadtmanae detected in the human gut using an improved DNA detection protocol. PLoS ONE 2009, 4, e7063.
-
(2009)
PLoS ONE
, vol.4
-
-
Dridi, B.1
Henry, M.2
El Khéchine, A.3
Raoult, D.4
Drancourt, M.5
-
62
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
Human Microbiome Project Consortium. Structure, function and diversity of the healthy human microbiome. Nature 2012, 486, 207-214.
-
(2012)
Nature
, vol.486
, pp. 207-214
-
-
Consortium, H.M.P.1
-
63
-
-
84862141704
-
Human gut microbiome viewed across age and geography
-
Yatsunenko, T.; Rey, F.E.; Manary, M.J.; Trehan, I.; Dominguez-Bello, M.G.; Contreras, M.; Magris, M.; Hidalgo, G.; Baldassano, R.N.; Anokhin, A.P.; et al. Human gut microbiome viewed across age and geography. Nature 2012, 486, 222-227.
-
(2012)
Nature
, vol.486
, pp. 222-227
-
-
Yatsunenko, T.1
Rey, F.E.2
Manary, M.J.3
Trehan, I.4
Dominguez-Bello, M.G.5
Contreras, M.6
Magris, M.7
Hidalgo, G.8
Baldassano, R.N.9
Anokhin, A.P.10
-
64
-
-
84860159988
-
Anthropology of microbes
-
Benezra, A.; DeStefano, J.; Gordon, J.I. Anthropology of microbes. Proc. Natl. Acad. Sci. USA 2012, 109, 6378-6381.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 6378-6381
-
-
Benezra, A.1
DeStefano, J.2
Gordon, J.I.3
-
65
-
-
84924137629
-
Comparative analysis of the human saliva microbiome from different climate zones: Alaska, Germany, and Africa
-
Li, J.; Quinque, D.; Horz, H.-P.; Li, M.; Rzhetskaya, M.; Raff, J.A.; Hayes, M.G.; Stoneking, M. Comparative analysis of the human saliva microbiome from different climate zones: Alaska, Germany, and Africa. BMC Microbiol. 2014, 14, doi:10.1186/s12866-014-0316-1.
-
(2014)
BMC Microbiol
, vol.14
-
-
Li, J.1
Quinque, D.2
Horz, H.-P.3
Li, M.4
Rzhetskaya, M.5
Raff, J.A.6
Hayes, M.G.7
Stoneking, M.8
-
66
-
-
84908507442
-
Global analysis of saliva as a source of bacterial genes for insights into human population structure and migration studies
-
Henne, K.; Li, J.; Stoneking, M.; Kessler, O.; Schilling, H.; Sonanini, A.; Conrads, G.; Horz, H.-P. Global analysis of saliva as a source of bacterial genes for insights into human population structure and migration studies. BMC Evol. Biol. 2014, 14, doi:10.1186/s12862-014-0190-3.
-
(2014)
BMC Evol. Biol
, vol.14
-
-
Henne, K.1
Li, J.2
Stoneking, M.3
Kessler, O.4
Schilling, H.5
Sonanini, A.6
Conrads, G.7
Horz, H.-P.8
-
67
-
-
80051695033
-
High diversity of the saliva microbiome in Batwa Pygmies
-
Nasidze, I.; Li, J.; Schroeder, R.; Creasey, J.L.; Li, M.; Stoneking, M. High diversity of the saliva microbiome in Batwa Pygmies. PLoS ONE 2011, 6, e23352.
-
(2011)
PLoS ONE
, vol.6
-
-
Nasidze, I.1
Li, J.2
Schroeder, R.3
Creasey, J.L.4
Li, M.5
Stoneking, M.6
-
68
-
-
55949102931
-
Bacterial, archaeal, and eukaryal diversity in the intestines of Korean people
-
Nam, Y.-D.; Chang, H.-W.; Kim, K.-H.; Roh, S.W.; Kim, M.-S.; Jung, M.-J.; Lee, S.-W.; Kim, J.-Y.; Yoon, J.-H.; Bae, J.-W. Bacterial, archaeal, and eukaryal diversity in the intestines of Korean people. J. Microbiol. Seoul Korea 2008, 46, 491-501.
-
(2008)
J. Microbiol. Seoul Korea
, vol.46
, pp. 491-501
-
-
Nam, Y.-D.1
Chang, H.-W.2
Kim, K.-H.3
Roh, S.W.4
Kim, M.-S.5
Jung, M.-J.6
Lee, S.-W.7
Kim, J.-Y.8
Yoon, J.-H.9
Bae, J.-W.10
-
69
-
-
84884238541
-
Human gut microbiota community structures in urban and rural populations in Russia
-
Tyakht, A.V.; Kostryukova, E.S.; Popenko, A.S.; Belenikin, M.S.; Pavlenko, A.V.; Larin, A.K.; Karpova, I.Y.; Selezneva, O.V.; Semashko, T.A.; Ospanova, E.A.; et al. Human gut microbiota community structures in urban and rural populations in Russia. Nat. Commun. 2013, 4, doi:10.1038/ncomms3469.
-
(2013)
Nat. Commun
, vol.4
-
-
Tyakht, A.V.1
Kostryukova, E.S.2
Popenko, A.S.3
Belenikin, M.S.4
Pavlenko, A.V.5
Larin, A.K.6
Karpova, I.Y.7
Selezneva, O.V.8
Semashko, T.A.9
Ospanova, E.A.10
-
70
-
-
0019140894
-
Studies on breath methane: The effect of ethnic origins and lactulose
-
Pitt, P.; de Bruijn, K.M.; Beeching, M.F.; Goldberg, E.; Blendis, L.M. Studies on breath methane: The effect of ethnic origins and lactulose. Gut 1980, 21, 951-954.
-
(1980)
Gut
, vol.21
, pp. 951-954
-
-
Pitt, P.1
de Bruijn, K.M.2
Beeching, M.F.3
Goldberg, E.4
Blendis, L.M.5
-
71
-
-
0023887258
-
Breath methane and large bowel cancer risk in contrasting African populations
-
Segal, I.; Walker, A.R.; Lord, S.; Cummings, J.H. Breath methane and large bowel cancer risk in contrasting African populations. Gut 1988, 29, 608-613.
-
(1988)
Gut
, vol.29
, pp. 608-613
-
-
Segal, I.1
Walker, A.R.2
Lord, S.3
Cummings, J.H.4
-
72
-
-
0027141440
-
Breath hydrogen and methane in populations at different risk for colon cancer
-
Le Marchand, L.; Wilkens, L.R.; Harwood, P.; Cooney, R.V. Breath hydrogen and methane in populations at different risk for colon cancer. Int. J. Cancer J. Int. Cancer 1993, 55, 887-890.
-
(1993)
Int. J. Cancer J. Int. Cancer
, vol.55
, pp. 887-890
-
-
Le Marchand, L.1
Wilkens, L.R.2
Harwood, P.3
Cooney, R.V.4
-
73
-
-
84860872103
-
Hydrogenotrophic microbiota distinguish native Africans from African and European Americans: Diet and colonic hydrogenotrophs
-
Nava, G.M.; Carbonero, F.; Ou, J.; Benefiel, A.C.; O'Keefe, S.J.; Gaskins, H.R. Hydrogenotrophic microbiota distinguish native Africans from African and European Americans: Diet and colonic hydrogenotrophs. Environ. Microbiol. Rep. 2012, 4, 307-315.
-
(2012)
Environ. Microbiol. Rep
, vol.4
, pp. 307-315
-
-
Nava, G.M.1
Carbonero, F.2
Ou, J.3
Benefiel, A.C.4
O'Keefe, S.J.5
Gaskins, H.R.6
-
74
-
-
84865722131
-
Contributions of the microbial hydrogen economy to colonic homeostasis
-
Carbonero, F.; Benefiel, A.C.; Gaskins, H.R. Contributions of the microbial hydrogen economy to colonic homeostasis. Nat. Rev. Gastroenterol. Hepatol. 2012, 9, 504-518.
-
(2012)
Nat. Rev. Gastroenterol. Hepatol
, vol.9
, pp. 504-518
-
-
Carbonero, F.1
Benefiel, A.C.2
Gaskins, H.R.3
|