-
1
-
-
84890405523
-
Human genetic data reveal contrasting demographic patterns between sedentary and nomadic populations that predate the emergence of farming
-
Aime C, Laval G, Patin E, Verdu P, Segurel L, Chaix R, Hegay T, Quintana-Murci L, Heyer E, Austerlitz F. 2013. Human genetic data reveal contrasting demographic patterns between sedentary and nomadic populations that predate the emergence of farming. Mol Biol Evol. 30:2629-2644.
-
(2013)
Mol Biol Evol.
, vol.30
, pp. 2629-2644
-
-
Aime, C.1
Laval, G.2
Patin, E.3
Verdu, P.4
Segurel, L.5
Chaix, R.6
Hegay, T.7
Quintana-Murci, L.8
Heyer, E.9
Austerlitz, F.10
-
2
-
-
77958134755
-
Ascertainment biases in SNP chips affect measures of population divergence
-
Albrechtsen A, Nielsen FC, Nielsen R. 2010. Ascertainment biases in SNP chips affect measures of population divergence. Mol Biol Evol. 27: 2534-2547.
-
(2010)
Mol Biol Evol.
, vol.27
, pp. 2534-2547
-
-
Albrechtsen, A.1
Nielsen, F.C.2
Nielsen, R.3
-
3
-
-
0043210659
-
Estimation of population growth or decline in genetically monitored populations
-
Beaumont MA. 2003. Estimation of population growth or decline in genetically monitored populations. Genetics 164:1139-1160.
-
(2003)
Genetics
, vol.164
, pp. 1139-1160
-
-
Beaumont, M.A.1
-
4
-
-
58149282899
-
Joint determination of topology, divergence time, and immigration in population trees
-
Matsumura S, Forster P, Renfrew C, editors. Cambridge: McDonald Institute for Archaeological Research
-
Beaumont MA. 2008. Joint determination of topology, divergence time, and immigration in population trees. In: Matsumura S, Forster P, Renfrew C, editors. Simulations, genetics and human prehistory (McDonald Institute Monographs),. Cambridge: McDonald Institute for Archaeological Research. pp. 135-154.
-
(2008)
Simulations, Genetics and Human Prehistory (McDonald Institute Monographs)
, pp. 135-154
-
-
Beaumont, M.A.1
-
5
-
-
0036964474
-
Approximate Bayesian computation in population genetics
-
Beaumont MA, Zhang WY, Balding DJ. 2002. Approximate Bayesian computation in population genetics. Genetics 162:2025-2035.
-
(2002)
Genetics
, vol.162
, pp. 2025-2035
-
-
Beaumont, M.A.1
Zhang, W.Y.2
Balding, D.J.3
-
6
-
-
77954247262
-
ABC as a flexible framework to estimate demography over space and time: Some cons, many pros
-
Bertorelle G, Benazzo A, Mona S. 2010. ABC as a flexible framework to estimate demography over space and time: some cons, many pros. Mol Ecol 19:2609-2625.
-
(2010)
Mol Ecol
, vol.19
, pp. 2609-2625
-
-
Bertorelle, G.1
Benazzo, A.2
Mona, S.3
-
7
-
-
73549122582
-
Non-linear regression models for Approximate Bayesian Computation
-
Blum MGB, Francois O. 2010. Non-linear regression models for Approximate Bayesian Computation. Stat Comput 20:63-73.
-
(2010)
Stat Comput
, vol.20
, pp. 63-73
-
-
Blum, M.G.B.1
Francois, O.2
-
8
-
-
78751540480
-
Deep divergences of human gene trees and models of human origins
-
Blum MGB, Jakobsson M. 2011. Deep divergences of human gene trees and models of human origins. Mol Biol Evol. 28:889-898.
-
(2011)
Mol Biol Evol.
, vol.28
, pp. 889-898
-
-
Blum, M.G.B.1
Jakobsson, M.2
-
10
-
-
33845485159
-
La Neolithisation en Asie Centrale: Un etat de la question
-
Brunet F. 1999. La Neolithisation en Asie Centrale: un etat de la question. Paleorient 24:27-48.
-
(1999)
Paleorient
, vol.24
, pp. 27-48
-
-
Brunet, F.1
-
12
-
-
46049114864
-
Genetic traces of east-To-west human expansion waves in Eurasia
-
Chaix R, Austerlitz F, Hegay T, Quintana-Murci L, Heyer E. 2008. Genetic traces of east-To-west human expansion waves in Eurasia. Am J Phys Anthropol 136:309-317.
-
(2008)
Am J Phys Anthropol
, vol.136
, pp. 309-317
-
-
Chaix, R.1
Austerlitz, F.2
Hegay, T.3
Quintana-Murci, L.4
Heyer, E.5
-
13
-
-
8844244725
-
The genetic or mythical ancestry of descent groups: Lessons from the y chromosome
-
Chaix R, Austerlitz F, Khegay T, Jacquesson S, Hammer MF, Heyer E, Quintana-Murci L. 2004. The genetic or mythical ancestry of descent groups: lessons from the Y chromosome. Am J Hum Genet. 75: 1113-1116.
-
(2004)
Am J Hum Genet.
, vol.75
, pp. 1113-1116
-
-
Chaix, R.1
Austerlitz, F.2
Khegay, T.3
Jacquesson, S.4
Hammer, M.F.5
Heyer, E.6
Quintana-Murci, L.7
-
14
-
-
33845876603
-
From social to genetic structures in central Asia
-
Chaix R, Quintana-Murci L, Hegay T, Hammer MF, Mobasher Z, Austerlitz F, Heyer E. 2007. From social to genetic structures in central Asia. Curr Biol. 17:43-48.
-
(2007)
Curr Biol.
, vol.17
, pp. 43-48
-
-
Chaix, R.1
Quintana-Murci, L.2
Hegay, T.3
Hammer, M.F.4
Mobasher, Z.5
Austerlitz, F.6
Heyer, E.7
-
15
-
-
27544474337
-
Ascertainment bias in studies of human genome-wide polymorphism
-
Clark AG, Hubisz MJ, Bustamante CD, Williamson SH, Nielsen R. 2005. Ascertainment bias in studies of human genome-wide polymorphism. Genome Res. 15:1496-1502.
-
(2005)
Genome Res.
, vol.15
, pp. 1496-1502
-
-
Clark, A.G.1
Hubisz, M.J.2
Bustamante, C.D.3
Williamson, S.H.4
Nielsen, R.5
-
16
-
-
0032471433
-
Trading genes along the silk road: MtDNA sequences and the origin of central Asian populations
-
Comas D, Calafell F, Mateu E, Perez-Lezaun A, Bosch E, Martinez-Arias R, Clarimon J, Facchini F, Fiori G, Luiselli D, et al. 1998. Trading genes along the silk road: mtDNA sequences and the origin of central Asian populations. Am J Hum Genet. 63:1824-1838.
-
(1998)
Am J Hum Genet.
, vol.63
, pp. 1824-1838
-
-
Comas, D.1
Calafell, F.2
Mateu, E.3
Perez-Lezaun, A.4
Bosch, E.5
Martinez-Arias, R.6
Clarimon, J.7
Facchini, F.8
Fiori, G.9
Luiselli, D.10
-
17
-
-
2342457880
-
Admixture, migrations, and dispersals in Central Asia: Evidence from maternal DNA lineages
-
Comas D, Plaza S, Wells RS, Yuldaseva N, Lao O, Calafell F, Bertranpetit J. 2004. Admixture, migrations, and dispersals in Central Asia: evidence from maternal DNA lineages. Eur J Hum Genet. 12:495-504.
-
(2004)
Eur J Hum Genet.
, vol.12
, pp. 495-504
-
-
Comas, D.1
Plaza, S.2
Wells, R.S.3
Yuldaseva, N.4
Lao, O.5
Calafell, F.6
Bertranpetit, J.7
-
18
-
-
77955493069
-
Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1. 0)
-
Cornuet JM, Ravigne V, Estoup A. 2010. Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1. 0). BMC Bioinformatics 11:401.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 401
-
-
Cornuet, J.M.1
Ravigne, V.2
Estoup, A.3
-
20
-
-
84861153207
-
Abc: An R package for approximate Bayesian computation (ABC)
-
Csillery K, Francois O, Blum MGB. 2012. abc: An R package for approximate Bayesian computation (ABC). Methods Ecol Evol. 3: 475-479.
-
(2012)
Methods Ecol Evol.
, vol.3
, pp. 475-479
-
-
Csillery, K.1
Francois, O.2
Blum, M.G.B.3
-
22
-
-
0348011482
-
Power of neutrality tests to detect bottlenecks and hitchhiking
-
Depaulis F, Mousset S, Veuille M. 2003. Power of neutrality tests to detect bottlenecks and hitchhiking. J Mol Evol. 57:S190-S200.
-
(2003)
J Mol Evol.
, vol.57
, pp. S190-S200
-
-
Depaulis, F.1
Mousset, S.2
Veuille, M.3
-
23
-
-
84874788410
-
Ancient DNA reveals prehistoric gene-flow from Siberia in the complex human population history of North East Europe
-
Der Sarkissian C, Balanovsky O, Brandt G, Khartanovich V, Buzhilova A, Koshel S, Zaporozhchenko V, Gronenborn D, Moiseyev V, Kolpakov E, et al. 2013. Ancient DNA reveals prehistoric gene-flow from Siberia in the complex human population history of North East Europe. PLoS Genet. 9(2): e1003296.
-
(2013)
PLoS Genet.
, vol.9
, Issue.2
, pp. e1003296
-
-
Der Sarkissian, C.1
Balanovsky, O.2
Brandt, G.3
Khartanovich, V.4
Buzhilova, A.5
Koshel, S.6
Zaporozhchenko, V.7
Gronenborn, D.8
Moiseyev, V.9
Kolpakov, E.10
-
24
-
-
84885782165
-
Afghan Hindu Kush: Where Eurasian sub-continent gene flows converge
-
Di Cristofaro J, Pennarun E, Mazieres S, Myres NM, Lin AA, Temori SA, Metspalu M, Metspalu E, Witzel M, King RJ, et al. 2013. Afghan Hindu Kush: where Eurasian sub-continent gene flows converge. PLoS One 8:12.
-
(2013)
PLoS One
, vol.8
, pp. 12
-
-
Di Cristofaro, J.1
Pennarun, E.2
Mazieres, S.3
Myres, N.M.4
Lin, A.A.5
Temori, S.A.6
Metspalu, M.7
Metspalu, E.8
Witzel, M.9
King, R.J.10
-
25
-
-
66249096922
-
Mid to late Holocene climate change and its influence on cultural development in South Central Siberia
-
Scott EM, Alekseev AY, Zaitseva G, editors. Springer Netherlands
-
Dirksen VG, van Geel B. 2004. Mid to late Holocene climate change and its influence on cultural development in South Central Siberia. In: Scott EM, Alekseev AY, Zaitseva G, editors. Impact of the environment on human migration in Eurasia. Springer Netherlands. p. 291-307.
-
(2004)
Impact of the Environment on Human Migration in Eurasia
, pp. 291-307
-
-
Dirksen, V.G.1
Van Geel, B.2
-
26
-
-
0036718239
-
Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis
-
Estoup A, Jarne P, Cornuet JM. 2002. Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis. Mol Ecol 11:1591-1604.
-
(2002)
Mol Ecol
, vol.11
, pp. 1591-1604
-
-
Estoup, A.1
Jarne, P.2
Cornuet, J.M.3
-
27
-
-
79954469204
-
Fastsimcoal: A continuous-Time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios
-
Excoffier L, Foll M. 2011. Fastsimcoal: A continuous-Time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios. Bioinformatics 27:1332-1334.
-
(2011)
Bioinformatics
, vol.27
, pp. 1332-1334
-
-
Excoffier, L.1
Foll, M.2
-
28
-
-
36749047447
-
Statistical evaluation of alternative models of human evolution
-
Fagundes NJR, Ray N, Beaumont MA, Neuenschwander S, Salzano FM, Bonatto SL, Excoffier L. 2007. Statistical evaluation of alternative models of human evolution. Proc Natl Acad Sci U S A. 104: 17614-17619.
-
(2007)
Proc Natl Acad Sci U S A.
, vol.104
, pp. 17614-17619
-
-
Fagundes, N.J.R.1
Ray, N.2
Beaumont, M.A.3
Neuenschwander, S.4
Salzano, F.M.5
Bonatto, S.L.6
Excoffier, L.7
-
29
-
-
26044441323
-
Cross-cultural estimation of the human generation interval for use in genetics-based population divergence studies
-
Fenner JN. 2005. Cross-cultural estimation of the human generation interval for use in genetics-based population divergence studies. Am J Phys Anthropol 128:415-423.
-
(2005)
Am J Phys Anthropol
, vol.128
, pp. 415-423
-
-
Fenner, J.N.1
-
31
-
-
1242321520
-
Ice Ages and the mitochondrial DNA chronology of human dispersals: A review
-
Forster P. 2004. Ice Ages and the mitochondrial DNA chronology of human dispersals: A review. Philos Trans R Soc Lond B Biol Sci. 359: 255-264.
-
(2004)
Philos Trans R Soc Lond B Biol Sci.
, vol.359
, pp. 255-264
-
-
Forster, P.1
-
32
-
-
84856745143
-
Multiregional emergence of mobile pastoralism and nonuniform institutional complexity across Eurasia
-
Frachetti M. 2012. Multiregional emergence of mobile pastoralism and nonuniform institutional complexity across Eurasia. Curr Anthropol 53:2-38.
-
(2012)
Curr Anthropol
, vol.53
, pp. 2-38
-
-
Frachetti, M.1
-
33
-
-
0035076168
-
Detection of reduction in population size using data from microsatellite loci
-
Garza JC, Williamson EG. 2001. Detection of reduction in population size using data from microsatellite loci. Mol Ecol 10:305-318.
-
(2001)
Mol Ecol
, vol.10
, pp. 305-318
-
-
Garza, J.C.1
Williamson, E.G.2
-
34
-
-
0000106855
-
On the convergence of Monte-Carlo maximumlikelihood calculations
-
Geyer CJ. 1994. On the convergence of Monte-Carlo maximumlikelihood calculations. J R Stat Soc Series B Methodol 56:261-274.
-
(1994)
J R Stat Soc Series B Methodol
, vol.56
, pp. 261-274
-
-
Geyer, C.J.1
-
36
-
-
84869010187
-
Tracing the origin of the east-west population admixture in the Altai Region (Central Asia)
-
Gonzalez-Ruiz M, Santos C, Jordana X, Simon M, Lalueza-Fox C, Gigli E, Aluja MP, Malgosa A. 2012. Tracing the origin of the east-west population admixture in the Altai Region (Central Asia). PLoS One 7(11): e48904.
-
(2012)
PLoS One
, vol.7
, Issue.11
, pp. e48904
-
-
Gonzalez-Ruiz, M.1
Santos, C.2
Jordana, X.3
Simon, M.4
Lalueza-Fox, C.5
Gigli, E.6
Aluja, M.P.7
Malgosa, A.8
-
37
-
-
80053386624
-
Bayesian inference of ancient human demography from individual genome sequences
-
Gronau I, Hubisz MJ, Gulko B, Danko CG, Siepel A. 2011. Bayesian inference of ancient human demography from individual genome sequences. Nat Genet. 43:1031-1034.
-
(2011)
Nat Genet.
, vol.43
, pp. 1031-1034
-
-
Gronau, I.1
Hubisz, M.J.2
Gulko, B.3
Danko, C.G.4
Siepel, A.5
-
38
-
-
73449149044
-
Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
-
Gutenkunst RN, Hernandez RD, Williamson SH, Bustamante CD. 2009. Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data. PLoS Genet. 5:e1000695.
-
(2009)
PLoS Genet
, vol.5
, pp. e1000695
-
-
Gutenkunst, R.N.1
Hernandez, R.D.2
Williamson, S.H.3
Bustamante, C.D.4
-
39
-
-
84859094446
-
Afghanistan's ethnic groups share a Ychromosomal heritage structured by historical events
-
HaberM, Platt DE, Ashrafian Bonab M, Youhanna SC, Soria-Hernanz DF, Martinez-Cruz B, Doaihy B, Ghassibe-Sabbagh M, Rafatpanah H, Ghanbari M, et al. 2012. Afghanistan's ethnic groups share a Ychromosomal heritage structured by historical events. PLoS One 7:8.
-
(2012)
PLoS One
, vol.7
, pp. 8
-
-
Haber, M.1
Platt, D.E.2
Ashrafian Bonab, M.3
Youhanna, S.C.4
Soria-Hernanz, D.F.5
Martinez-Cruz, B.6
Doaihy, B.7
Ghassibe-Sabbagh, M.8
Rafatpanah, H.9
Ghanbari, M.10
-
41
-
-
84898261762
-
Jeitun and the transition to agriculture in Central Asia
-
Harris DR. 1997. Jeitun and the transition to agriculture in Central Asia. Archaeol Int 1:28-31.
-
(1997)
Archaeol Int
, vol.1
, pp. 28-31
-
-
Harris, D.R.1
-
42
-
-
0009298585
-
Jeitun: Recent excavations at an early Neolithic site in Southern Turkmenistan
-
Harris DR, Gosden C, Charles MP. 1996. Jeitun: recent excavations at an early Neolithic site in Southern Turkmenistan. Proc Prehist Soc 62: 423-442.
-
(1996)
Proc Prehist Soc
, vol.62
, pp. 423-442
-
-
Harris, D.R.1
Gosden, C.2
Charles, M.P.3
-
43
-
-
84893945338
-
A genetic atlas of human admixture history
-
Hellenthal G, Busby GBJ, Band G, Wilson JF, Capelli C, Falush D, Myers S. 2014. A genetic atlas of human admixture history. Science 343: 747-751.
-
(2014)
Science
, vol.343
, pp. 747-751
-
-
Hellenthal, G.1
Busby, G.B.J.2
Band, G.3
Wilson, J.F.4
Capelli, C.5
Falush, D.6
Myers, S.7
-
45
-
-
22744459171
-
On the number of New World founders: A population genetic portrait of the peopling of the Americas
-
Hey J. 2005. On the number of New World founders: A population genetic portrait of the peopling of the Americas. PLoS Biol. 3:e193.
-
(2005)
PLoS Biol.
, vol.3
, pp. e193
-
-
Hey, J.1
-
46
-
-
77952297997
-
The divergence of chimpanzee species and subspecies as revealed in multipopulation isolation-with-migration analyses
-
Hey J. 2010a. The divergence of chimpanzee species and subspecies as revealed in multipopulation isolation-with-migration analyses. Mol Biol Evol. 27:921-933.
-
(2010)
Mol Biol Evol.
, vol.27
, pp. 921-933
-
-
Hey, J.1
-
47
-
-
77952294620
-
Isolation with migration models for more than two populations
-
Hey J. 2010b. Isolation with migration models for more than two populations. Mol Biol Evol. 27:905-920.
-
(2010)
Mol Biol Evol.
, vol.27
, pp. 905-920
-
-
Hey, J.1
-
48
-
-
3142714474
-
Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D-persimilis
-
Hey J, Nielsen R. 2004. Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D-persimilis. Genetics 167:747-760.
-
(2004)
Genetics
, vol.167
, pp. 747-760
-
-
Hey, J.1
Nielsen, R.2
-
49
-
-
33847253975
-
Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics
-
Hey J, Nielsen R. 2007. Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics. Proc Natl Acad Sci U S A. 104:2785-2790.
-
(2007)
Proc Natl Acad Sci U S A.
, vol.104
, pp. 2785-2790
-
-
Hey, J.1
Nielsen, R.2
-
50
-
-
70349587165
-
Genetic diversity and the emergence of ethnic groups in Central Asia
-
Heyer E, Balaresque P, Jobling MA, Quintana-Murci L, Chaix R, Segurel L, Aldashev A, Hegay T. 2009. Genetic diversity and the emergence of ethnic groups in Central Asia. BMC Genet. 10:49.
-
(2009)
BMC Genet.
, vol.10
, pp. 49
-
-
Heyer, E.1
Balaresque, P.2
Jobling, M.A.3
Quintana-Murci, L.4
Chaix, R.5
Segurel, L.6
Aldashev, A.7
Hegay, T.8
-
51
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA sequences
-
Hudson RR, Kaplan NL. 1985. Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics 111:147-164.
-
(1985)
Genetics
, vol.111
, pp. 147-164
-
-
Hudson, R.R.1
Kaplan, N.L.2
-
52
-
-
0026709389
-
Estimation of levels of gene flow from DNA-sequence data
-
Hudson RR, Slatkin M, Maddison WP. 1992. Estimation of levels of gene flow from DNA-sequence data. Genetics 132:583-589.
-
(1992)
Genetics
, vol.132
, pp. 583-589
-
-
Hudson, R.R.1
Slatkin, M.2
Maddison, W.P.3
-
53
-
-
34748819978
-
Measurement of the human allele frequency spectrum demonstrates greater genetic drift in East Asians than in Europeans
-
Keinan A, Mullikin JC, Patterson N, Reich D. 2007. Measurement of the human allele frequency spectrum demonstrates greater genetic drift in East Asians than in Europeans. Nat Genet. 39:1251-1255.
-
(2007)
Nat Genet.
, vol.39
, pp. 1251-1255
-
-
Keinan, A.1
Mullikin, J.C.2
Patterson, N.3
Reich, D.4
-
54
-
-
0014494672
-
Number of heterozygous nucleotide sites maintained in a finite population due to steady flux of mutations
-
Kimura M. 1969. Number of heterozygous nucleotide sites maintained in a finite population due to steady flux of mutations. Genetics 61: 893.
-
(1969)
Genetics
, vol.61
, pp. 893
-
-
Kimura, M.1
-
55
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol. 16:111-120.
-
(1980)
J Mol Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
56
-
-
0002556819
-
On the genealogy of large populations
-
Kingman JFC. 1982. On the genealogy of large populations. J Appl Probab 19:27-43.
-
(1982)
J Appl Probab
, vol.19
, pp. 27-43
-
-
Kingman, J.F.C.1
-
57
-
-
77956419544
-
Formulating a historical and demographic model of recent human evolution based on resequencing data from noncoding regions
-
Laval G, Patin E, Barreiro LB, Quintana-Murci L. 2010. Formulating a historical and demographic model of recent human evolution based on resequencing data from noncoding regions. PLoS One 5(4):e10284.
-
(2010)
PLoS One
, vol.5
, Issue.4
, pp. e10284
-
-
Laval, G.1
Patin, E.2
Barreiro, L.B.3
Quintana-Murci, L.4
-
58
-
-
77949428894
-
Evidence that a West-East admixed population lived in the Tarim Basin as early as the early Bronze Age
-
Li C, Li H, Cui Y, Xie C, Cai D, LiW, Mair V, Xu Z, Zhang Q, Abuduresle I, et al. 2010. Evidence that a West-East admixed population lived in the Tarim Basin as early as the early Bronze Age. BMC Biol. 8:15.
-
(2010)
BMC Biol.
, vol.8
, pp. 15
-
-
Li, C.1
Li, H.2
Cui, Y.3
Xie, C.4
Cai, D.5
Li, W.6
Mair, V.7
Xu, Z.8
Zhang, Q.9
Abuduresle, I.10
-
59
-
-
79960914105
-
Inference of human population history from individual whole-genome sequences
-
Li H, Durbin R. 2011. Inference of human population history from individual whole-genome sequences. Nature 475:493-496.
-
(2011)
Nature
, vol.475
, pp. 493-496
-
-
Li, H.1
Durbin, R.2
-
60
-
-
39749181521
-
Worldwide human relationships inferred from genome-wide patterns of variation
-
Li JZ, Absher DM, Tang H, Southwick AM, Casto AM, Ramachandran S, Cann HM, Barsh GS, Feldman M, Cavalli-Sforza LL, et al. 2008. Worldwide human relationships inferred from genome-wide patterns of variation. Science 319:1100-1104.
-
(2008)
Science
, vol.319
, pp. 1100-1104
-
-
Li, J.Z.1
Absher, D.M.2
Tang, H.3
Southwick, A.M.4
Casto, A.M.5
Ramachandran, S.6
Cann, H.M.7
Barsh, G.S.8
Feldman, M.9
Cavalli-Sforza, L.L.10
-
61
-
-
67749125023
-
Methods for human demographic inference using haplotype patterns from genomewide single-nucleotide polymorphism data
-
Lohmueller KE, Bustamante CD, Clark AG. 2009. Methods for human demographic inference using haplotype patterns from genomewide single-nucleotide polymorphism data. Genetics 182:217-231.
-
(2009)
Genetics
, vol.182
, pp. 217-231
-
-
Lohmueller, K.E.1
Bustamante, C.D.2
Clark, A.G.3
-
62
-
-
77955505802
-
The effect of recent admixture on inference of ancient human population history
-
Lohmueller KE, Bustamante CD, Clark AG. 2010. The effect of recent admixture on inference of ancient human population history. Genetics 185:611-622.
-
(2010)
Genetics
, vol.185
, pp. 611-622
-
-
Lohmueller, K.E.1
Bustamante, C.D.2
Clark, A.G.3
-
63
-
-
84885579208
-
-
Philadelphia (PA): John Benjamins Publishing Company BV.
-
Lung R. 2011. Interpreters in early imperial China. Philadelphia (PA): John Benjamins Publishing Company BV.
-
(2011)
Interpreters in Early Imperial China
-
-
Lung, R.1
-
64
-
-
84872008491
-
A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species
-
Mailund T, Halager AE, Westergaard M, Dutheil JY, Munch K, Andersen LN, Lunter G, Prufer K, Scally A, Hobolth A, et al. 2012. A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species. PLoS Genet. 8(12): e1003125.
-
(2012)
PLoS Genet.
, vol.8
, Issue.12
, pp. e1003125
-
-
Mailund, T.1
Halager, A.E.2
Westergaard, M.3
Dutheil, J.Y.4
Munch, K.5
Andersen, L.N.6
Lunter, G.7
Prufer, K.8
Scally, A.9
Hobolth, A.10
-
65
-
-
78651397690
-
In the heartland of Eurasia: The multilocus genetic landscape of Central Asian populations
-
Martinez-Cruz B, Vitalis R, Segurel L, Austerlitz F, Georges M, Thery S, Quintana-Murci L, Hegay T, Aldashev A, Nasyrova F, et al. 2011. In the heartland of Eurasia: the multilocus genetic landscape of Central Asian populations. Eur J Hum Genet. 19:216-223.
-
(2011)
Eur J Hum Genet.
, vol.19
, pp. 216-223
-
-
Martinez-Cruz, B.1
Vitalis, R.2
Segurel, L.3
Austerlitz, F.4
Georges, M.5
Thery, S.6
Quintana-Murci, L.7
Hegay, T.8
Aldashev, A.9
Nasyrova, F.10
-
67
-
-
33644545086
-
A new radiocarbon revolution and the dispersal of modern humans in Eurasia
-
Mellars P. 2006. A new radiocarbon revolution and the dispersal of modern humans in Eurasia. Nature 439:931-935.
-
(2006)
Nature
, vol.439
, pp. 931-935
-
-
Mellars, P.1
-
68
-
-
85010881294
-
Human migrations in the southern region of the West Siberian Plain during the Bronze Age: Archaeological, palaeogenetic and anthropological data
-
Kaiser E, Burger J, Schier W, editors. De Gruyter, Berlin
-
Molodin VI, Pilipenko AS, Romaschenko AG, Zhuravlev AA, Trapezov RO, Chikisheva TA, Pozdnyakov DY. 2012. Human migrations in the southern region of the West Siberian Plain during the Bronze Age: Archaeological, palaeogenetic and anthropological data. In: Kaiser E, Burger J, Schier W, editors. Population dynamics in pre-And early history. New approaches by using stable isotopes and genetics. De Gruyter, Berlin. p. 93-112.
-
(2012)
Population Dynamics in Pre-And Early History. New Approaches by Using Stable Isotopes and Genetics
, pp. 93-112
-
-
Molodin, V.I.1
Pilipenko, A.S.2
Romaschenko, A.G.3
Zhuravlev, A.A.4
Trapezov, R.O.5
Chikisheva, T.A.6
Pozdnyakov, D.Y.7
-
69
-
-
1842557437
-
A test of neutrality and constant population size based on the mismatch distribution
-
Mousset S, Derome N, Veuille M. 2004. A test of neutrality and constant population size based on the mismatch distribution. Mol Biol Evol. 21:724-731.
-
(2004)
Mol Biol Evol.
, vol.21
, pp. 724-731
-
-
Mousset, S.1
Derome, N.2
Veuille, M.3
-
71
-
-
0027290916
-
Evolutionary relationships of human populations on a global scale
-
Nei M, Roychoudhury AK. 1993. Evolutionary relationships of human populations on a global scale. Mol Biol Evol. 10:927-943.
-
(1993)
Mol Biol Evol.
, vol.10
, pp. 927-943
-
-
Nei, M.1
Roychoudhury, A.K.2
-
72
-
-
80052748466
-
Perspectives on human population structure at the cusp of the sequencing era
-
Chakravarti A, Green E, editors. Palo Alto
-
Novembre J, Ramachandran S. 2011. Perspectives on human population structure at the cusp of the sequencing era. In: Chakravarti A, Green E, editors. Annual review of genomics and human genetics, Annual Reviews, Palo Alto, Vol. 12. p 245-274.
-
(2011)
Annual Review of Genomics and Human Genetics, Annual Reviews
, vol.12
, pp. 245-274
-
-
Novembre, J.1
Ramachandran, S.2
-
73
-
-
0015765702
-
Model of mutation appropriate to estimate number of electrophoretically detectable alleles in a finite population
-
Ohta T, Kimura M. 1973. Model of mutation appropriate to estimate number of electrophoretically detectable alleles in a finite population. Genet Res. 22:201-204.
-
(1973)
Genet Res.
, vol.22
, pp. 201-204
-
-
Ohta, T.1
Kimura, M.2
-
74
-
-
66149116064
-
Inferring the demographic history of African farmers and pygmy hunter-gatherers using a multilocus resequencing data set
-
Patin E, Laval G, Barreiro LB, Salas A, Semino O, Santachiara-Benerecetti S, Kidd KK, Kidd JR, Van der Veen L, Hombert JM, et al. 2009. Inferring the demographic history of African farmers and pygmy hunter-gatherers using a multilocus resequencing data set. PLoS Genet. 5(4): e1000448.
-
(2009)
PLoS Genet
, vol.5
, Issue.4
, pp. e1000448
-
-
Patin, E.1
Laval, G.2
Barreiro, L.B.3
Salas, A.4
Semino, O.5
Santachiara-Benerecetti, S.6
Kidd, K.K.7
Kidd, J.R.8
Van Der Veen, L.9
Hombert, J.M.10
-
75
-
-
84869057650
-
Ancient admixture in human history
-
Patterson N, Moorjani P, Luo YT, Mallick S, Rohland N, Zhan YP, Genschoreck T, Webster T, Reich D. 2012. Ancient admixture in human history. Genetics 192:1065-1093.
-
(2012)
Genetics
, vol.192
, pp. 1065-1093
-
-
Patterson, N.1
Moorjani, P.2
Luo, Y.T.3
Mallick, S.4
Rohland, N.5
Zhan, Y.P.6
Genschoreck, T.7
Webster, T.8
Reich, D.9
-
76
-
-
0033361842
-
Sex-specific migration patterns in central Asian populations, revealed by analysis of Y-chromosome short tandem repeats and mtDNA
-
Perez-Lezaun A, Calafell F, Comas D, Mateu E, Bosch E, Martinez-Arias R, Clarimon J, Fiori G, Luiselli D, Facchini F, et al. 1999. Sex-specific migration patterns in central Asian populations, revealed by analysis of Y-chromosome short tandem repeats and mtDNA. Am J Hum Genet. 65:208-219.
-
(1999)
Am J Hum Genet.
, vol.65
, pp. 208-219
-
-
Perez-Lezaun, A.1
Calafell, F.2
Comas, D.3
Mateu, E.4
Bosch, E.5
Martinez-Arias, R.6
Clarimon, J.7
Fiori, G.8
Luiselli, D.9
Facchini, F.10
-
77
-
-
84869026948
-
Inference of population splits and mixtures from genome-wide allele frequency data
-
Pickrell JK, Pritchard JK. 2012. Inference of population splits and mixtures from genome-wide allele frequency data. PLoS Genet. 8:e1002967.
-
(2012)
PLoS Genet.
, vol.8
, pp. e1002967
-
-
Pickrell, J.K.1
Pritchard, J.K.2
-
78
-
-
0036021391
-
Inferences about human demography based on multilocus analyses of noncoding sequences
-
Pluzhnikov A, Di Rienzo A, Hudson RR. 2002. Inferences about human demography based on multilocus analyses of noncoding sequences. Genetics 161:1209-1218.
-
(2002)
Genetics
, vol.161
, pp. 1209-1218
-
-
Pluzhnikov, A.1
Di Rienzo, A.2
Hudson, R.R.3
-
80
-
-
80053391012
-
Whole-genome sequencing data offer insights into human demography
-
Pritchard JK. 2011. Whole-genome sequencing data offer insights into human demography. Nat. Genet. 43:923-925.
-
(2011)
Nat. Genet.
, vol.43
, pp. 923-925
-
-
Pritchard, J.K.1
-
81
-
-
2342575654
-
Where westmeets east: The complex mtDNA landscape of the southwest and Central Asian corridor
-
Quintana-Murci L, Chaix R, Wells RS, Behar DM, Sayar H, Scozzari R, Rengo C, Al-Zahery N, Semino O, Santachiara-Benerecetti AS, et al. 2004. Where westmeets east: the complex mtDNA landscape of the southwest and Central Asian corridor. Am J Hum Genet. 74:827-845.
-
(2004)
Am J Hum Genet.
, vol.74
, pp. 827-845
-
-
Quintana-Murci, L.1
Chaix, R.2
Wells, R.S.3
Behar, D.M.4
Sayar, H.5
Scozzari, R.6
Rengo, C.7
Al-Zahery, N.8
Semino, O.9
Santachiara-Benerecetti, A.S.10
-
82
-
-
84892367625
-
Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans
-
Raghavan M, Skoglund P, Graf KE, Metspalu M, Albrechtsen A, Moltke I, Rasmussen S, Stafford TW Jr, Orlando L, Metspalu E, et al. 2014. Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans. Nature 505:87-91.
-
(2014)
Nature
, vol.505
, pp. 87-91
-
-
Raghavan, M.1
Skoglund, P.2
Graf, K.E.3
Metspalu, M.4
Albrechtsen, A.5
Moltke, I.6
Rasmussen, S.7
Orlando, L.8
Metspalu, E.9
-
83
-
-
84863304598
-
-
R Core Team. Vienna (Austria): R Foundation for Statistical Computing
-
R Core Team. 2013. R: A language and environment for statistical computing. Vienna (Austria): R Foundation for Statistical Computing.
-
(2013)
R:A Language and Environment for Statistical Computing
-
-
-
85
-
-
80052025732
-
Highthroughput sequencing of complete human mtDNA genomes from the Caucasus and West Asia: High diversity and demographic inferences
-
Schoenberg A, Theunert C, Li M, Stoneking M, Nasidze I. 2011. Highthroughput sequencing of complete human mtDNA genomes from the Caucasus and West Asia: high diversity and demographic inferences. Eur J Hum Genet. 19:988-994.
-
(2011)
Eur J Hum Genet.
, vol.19
, pp. 988-994
-
-
Schoenberg, A.1
Theunert, C.2
Li, M.3
Stoneking, M.4
Nasidze, I.5
-
86
-
-
84884587371
-
Positive selection of protective variants for type 2 diabetes from the Neolithic onward: A case study in Central Asia
-
Segurel L, Austerlitz F, Toupance B, Gautier M, Kelley JL, Pasquet P, Lonjou C, Georges M, Voisin S, Cruaud C, et al. 2013. Positive selection of protective variants for type 2 diabetes from the Neolithic onward: A case study in Central Asia. Eur J Hum Genet. 21: 1146-1151.
-
(2013)
Eur J Hum Genet.
, vol.21
, pp. 1146-1151
-
-
Segurel, L.1
Austerlitz, F.2
Toupance, B.3
Gautier, M.4
Kelley, J.L.5
Pasquet, P.6
Lonjou, C.7
Georges, M.8
Voisin, S.9
Cruaud, C.10
-
87
-
-
52949122163
-
Sex-specific genetic structure and social organization in Central Asia: Insights from a multi-locus study
-
Segurel L, Martinez-Cruz B, Quintana-Murci L, Balaresque P, Georges M, Hegay T, Aldashev A, Nasyrova F, Jobling MA, Heyer E, et al. 2008. Sex-specific genetic structure and social organization in Central Asia: insights from a multi-locus study. PLoS Genet. 4(9): e1000200.
-
(2008)
PLoS Genet.
, vol.4
, Issue.9
, pp. e1000200
-
-
Segurel, L.1
Martinez-Cruz, B.2
Quintana-Murci, L.3
Balaresque, P.4
Georges, M.5
Hegay, T.6
Aldashev, A.7
Nasyrova, F.8
Jobling, M.A.9
Heyer, E.10
-
88
-
-
84863561074
-
Resequencing data provide no evidence for a human bottleneck in Africa during the penultimate glacial period
-
Sjodin P, Sjostrand AE, Jakobsson M, Blum MGB. 2012. Resequencing data provide no evidence for a human bottleneck in Africa during the penultimate glacial period. Mol Biol Evol. 29: 1851-1860.
-
(2012)
Mol Biol Evol.
, vol.29
, pp. 1851-1860
-
-
Sjodin, P.1
Sjostrand, A.E.2
Jakobsson, M.3
Blum, M.G.B.4
-
89
-
-
84907827169
-
Four old Iranian ethnic names: Scythian; Skudra; Sogdian; Saka
-
Szemerenyi O. 1980. Four old Iranian ethnic names: Scythian; Skudra; Sogdian; Saka. Sitzungsber Osterreichische Akad Wiss 371:1-47.
-
(1980)
Sitzungsber Osterreichische Akad Wiss
, vol.371
, pp. 1-47
-
-
Szemerenyi, O.1
-
91
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
92
-
-
60349093847
-
Origins and genetic diversity of pygmy hunter-gatherers from Western Central Africa
-
Verdu P, Austerlitz F, Estoup A, Vitalis R, GeorgesM, Thery S, Froment A, Le Bomin S, Gessain A, Hombert JM, et al. 2009. Origins and genetic diversity of pygmy hunter-gatherers from Western Central Africa. Curr Biol. 19:312-318.
-
(2009)
Curr Biol.
, vol.19
, pp. 312-318
-
-
Verdu, P.1
Austerlitz, F.2
Estoup, A.3
Vitalis, R.4
Georges, M.5
Thery, S.6
Froment, A.7
Le Bomin, S.8
Gessain, A.9
Hombert, J.M.10
-
93
-
-
83455198491
-
A general mechanistic model for admixture histories of hybrid populations
-
Verdu P, Rosenberg NA. 2011. A general mechanistic model for admixture histories of hybrid populations. Genetics 189: 1413-1426.
-
(2011)
Genetics
, vol.189
, pp. 1413-1426
-
-
Verdu, P.1
Rosenberg, N.A.2
-
94
-
-
29444451610
-
Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes
-
Voight BF, Adams AM, Frisse LA, Qian YD, Hudson RR, Di Rienzo A. 2005. Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes. Proc Natl Acad Sci U S A. 102:18508-18513.
-
(2005)
Proc Natl Acad Sci U S A.
, vol.102
, pp. 18508-18513
-
-
Voight, B.F.1
Adams, A.M.2
Frisse, L.A.3
Qian, Y.D.4
Hudson, R.R.5
Di Rienzo, A.6
-
95
-
-
0016491430
-
Number of segregating sites in genetic models without recombination
-
Watterson GA. 1975. Number of segregating sites in genetic models without recombination. Theor Popul Biol. 7:256-276.
-
(1975)
Theor Popul Biol.
, vol.7
, pp. 256-276
-
-
Watterson, G.A.1
-
96
-
-
0035205317
-
The discovery of single-nucleotide polymorphisms-And inferences about human demographic history
-
Wakeley J, Nielsen R, Lui-Cordero SN, Ardlie K. 2001. The discovery of single-nucleotide polymorphisms-And inferences about human demographic history. Am J Hum Genet. 69:1332-1347.
-
(2001)
Am J Hum Genet.
, vol.69
, pp. 1332-1347
-
-
Wakeley, J.1
Nielsen, R.2
Lui-Cordero, S.N.3
Ardlie, K.4
-
97
-
-
84861428712
-
Reconstructing the origin and spread of horse domestication in the Eurasian steppe
-
Warmuth V, Eriksson A, BowerMA, Barker G, Barrett E, Hanks BK, Li S, Lomitashvilie D, Ochir-Goryaeva M, Sizonov GV, et al. 2012. Reconstructing the origin and spread of horse domestication in the Eurasian steppe. Proc Natl Acad Sci U S A. 109:8202-8206.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 8202-8206
-
-
Warmuth, V.1
Eriksson, A.2
Bower, M.A.3
Barker, G.4
Barrett, E.5
Hanks, B.K.6
Li, S.7
Lomitashvilie, D.8
Ochir-Goryaeva, M.9
Sizonov, G.V.10
-
98
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
Weir BS, Cockerham CC. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38:1358-1370.
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
-
99
-
-
17944364925
-
The Eurasian Heartland:A continental perspective on Ychromosome diversity
-
Wells RS, Yuldasheva N, Ruzibakiev R, Underhill PA, Evseeva I, Blue-Smith J, Jin L, Su B, Pitchappan R, Shanmugalakshmi S, et al. 2001. The Eurasian Heartland: A continental perspective on Ychromosome diversity. Proc Natl Acad Sci U S A. 98:10244-10249.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 10244-10249
-
-
Wells, R.S.1
Yuldasheva, N.2
Ruzibakiev, R.3
Underhill, P.A.4
Evseeva, I.5
Blue-Smith, J.6
Jin, L.7
Su, B.8
Pitchappan, R.9
Shanmugalakshmi, S.10
-
100
-
-
0031669749
-
Genealogical inference from microsatellite data
-
Wilson IJ, Balding DJ. 1998. Genealogical inference from microsatellite data. Genetics 150:499-510.
-
(1998)
Genetics
, vol.150
, pp. 499-510
-
-
Wilson, I.J.1
Balding, D.J.2
-
101
-
-
34547863856
-
Recombination-filtered genomic datasets by information maximization
-
Woerner AE, Cox MP, Hammer MF. 2007. Recombination-filtered genomic datasets by information maximization. Bioinformatics 23: 1851-1853.
-
(2007)
Bioinformatics
, vol.23
, pp. 1851-1853
-
-
Woerner, A.E.1
Cox, M.P.2
Hammer, M.F.3
-
102
-
-
1642337411
-
Estimating effective population size or mutation rate with microsatellites
-
Xu HY, Fu YX. 2004. Estimating effective population size or mutation rate with microsatellites. Genetics 166:555-563.
-
(2004)
Genetics
, vol.166
, pp. 555-563
-
-
Xu, H.Y.1
Fu, Y.X.2
-
103
-
-
0037369850
-
The genetic legacy of the mongols
-
Zerjal T, Xue YL, Bertorelle G, Wells RS, Bao WD, Zhu SL, Qamar R, Ayub Q, Mohyuddin A, Fu SB, et al. 2003. The genetic legacy of the mongols. Am J Hum Genet. 72:717-721.
-
(2003)
Am J Hum Genet.
, vol.72
, pp. 717-721
-
-
Zerjal, T.1
Xue, Y.L.2
Bertorelle, G.3
Wells, R.S.4
Bao, W.D.5
Zhu, S.L.6
Qamar, R.7
Ayub, Q.8
Mohyuddin, A.9
Fu, S.B.10
|