-
1
-
-
0028982740
-
O2-sensing and O2-dependent gene regulation in facultatively anaerobic bacteria
-
Unden,G., Becker,S., Bongaerts,J., Holighaus,G., Schirawski,J. and Six,S. (1995) O2-sensing and O2-dependent gene regulation in facultatively anaerobic bacteria. Arch. Microbiol., 164, 81-90.
-
(1995)
Arch. Microbiol.
, vol.164
, pp. 81-90
-
-
Unden, G.1
Becker, S.2
Bongaerts, J.3
Holighaus, G.4
Schirawski, J.5
Six, S.6
-
2
-
-
3042898935
-
The narL gene product activates the nitrate reductase operon and represses the fumarate reductase and trimethylamine N-oxide reductase operons in Escherichia coli
-
Iuchi,S. and Lin,E. (1987) The narL gene product activates the nitrate reductase operon and represses the fumarate reductase and trimethylamine N-oxide reductase operons in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A., 84, 3901-3905.
-
(1987)
Proc. Natl. Acad. Sci. U.S.A.
, vol.84
, pp. 3901-3905
-
-
Iuchi, S.1
Lin, E.2
-
3
-
-
84871692263
-
Small RNAs and their role in biofilm formation
-
Chambers,J. and Sauer,K. (2013) Small RNAs and their role in biofilm formation. Trends Microbiol., 21, 39-49.
-
(2013)
Trends Microbiol.
, vol.21
, pp. 39-49
-
-
Chambers, J.1
Sauer, K.2
-
4
-
-
84915760848
-
Small RNA functions in carbon metabolism and virulence of enteric pathogens
-
Papenfort,K. and Vogel,J. (2014) Small RNA functions in carbon metabolism and virulence of enteric pathogens. Front. Cell. Infect. Microbiol., 4, doi:10.3389/fcimb.2014.00091.
-
(2014)
Front. Cell. Infect. Microbiol.
, vol.4
-
-
Papenfort, K.1
Vogel, J.2
-
5
-
-
0032881595
-
Molecular switches - The ON and OFF of bacterial phase variation
-
Henderson,I., Owen,P. and Nataro,J. (1999) Molecular switches - the ON and OFF of bacterial phase variation. Mol. Microbiol., 33, 919-932.
-
(1999)
Mol. Microbiol.
, vol.33
, pp. 919-932
-
-
Henderson, I.1
Owen, P.2
Nataro, J.3
-
6
-
-
84907048691
-
Phenotypic switching: An opportunity to bacteria thrive
-
Mendez-Vilas, A (ed)
-
Sousa,A., Machado,I. and Pereira,M. (2012) Phenotypic switching: an opportunity to bacteria thrive. In: Mendez-Vilas, A (ed). Science against microbial pathogens: communicating current research and technological advances. pp. 252-262.
-
(2012)
Science against Microbial Pathogens: Communicating Current Research and Technological Advances.
, pp. 252-262
-
-
Sousa, A.1
Machado, I.2
Pereira, M.3
-
7
-
-
58549096736
-
Quorum sensing in staphylococci
-
Novick,R. and Geisinger,E. (2008) Quorum sensing in staphylococci. Annu. Rev. Genet., 42, 541-564.
-
(2008)
Annu. Rev. Genet.
, vol.42
, pp. 541-564
-
-
Novick, R.1
Geisinger, E.2
-
8
-
-
84875597802
-
Bacterial quorum sensing: Its role in virulence and possibilities for its control
-
Rutherford,S. and Bassler,B. (2012) Bacterial quorum sensing: its role in virulence and possibilities for its control. Cold Spring Harb. Perspect. Med., 2, a012427.
-
(2012)
Cold Spring Harb. Perspect. Med.
, vol.2
-
-
Rutherford, S.1
Bassler, B.2
-
9
-
-
84859996025
-
A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp
-
Holmqvist,E., Unoson,C., Reimegård,J. and Wagner,E. (2012) A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp. Mol. Microbiol., 84, 414-427.
-
(2012)
Mol. Microbiol.
, vol.84
, pp. 414-427
-
-
Holmqvist, E.1
Unoson, C.2
Reimegård, J.3
Wagner, E.4
-
10
-
-
0035542549
-
Activation and repression of transcription initiation in bacteria
-
Lloyd,G., Landini,P. and Busby,S. (2001) Activation and repression of transcription initiation in bacteria. Essays Biochem., 37, 17-31.
-
(2001)
Essays Biochem.
, vol.37
, pp. 17-31
-
-
Lloyd, G.1
Landini, P.2
Busby, S.3
-
11
-
-
84874199986
-
Global analysis of transcriptional regulators in Staphylococcus aureus
-
Ibarra,J., Pérez-Rueda,E., Carroll,R. and Shaw,L. (2013) Global analysis of transcriptional regulators in Staphylococcus aureus. BMC Genomics, 14, 126.
-
(2013)
BMC Genomics
, vol.14
, pp. 126
-
-
Ibarra, J.1
Pérez-Rueda, E.2
Carroll, R.3
Shaw, L.4
-
12
-
-
0035212002
-
Transcription profiling-based identification of Staphylococcus aureus genes regulated by the agr and/or sarA loci
-
Dunman,P., Murphy,E., Haney,S., Palacios,D., Tucker-Kellogg,G., Wu,S., Brown,E., Zagursky,R., Shlaes,D. and Projan,S. (2001) Transcription profiling-based identification of Staphylococcus aureus genes regulated by the agr and/or sarA loci. J. Bacteriol., 183, 7341-7353.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 7341-7353
-
-
Dunman, P.1
Murphy, E.2
Haney, S.3
Palacios, D.4
Tucker-Kellogg, G.5
Wu, S.6
Brown, E.7
Zagursky, R.8
Shlaes, D.9
Projan, S.10
-
14
-
-
84863924309
-
Bacterial small RNA regulators: Versatile roles and rapidly evolving variations
-
Gottesman,S. and Storz,G. (2011) Bacterial small RNA regulators: versatile roles and rapidly evolving variations. Cold Spring Harb. Perspect. Biol., 3, a003798.
-
(2011)
Cold Spring Harb. Perspect. Biol.
, vol.3
-
-
Gottesman, S.1
Storz, G.2
-
15
-
-
84861442326
-
Regulating iron storage and metabolism with RNA: An overview of posttranscriptional controls of intracellular iron homeostasis
-
Salvail,H. and Massé,E. (2012) Regulating iron storage and metabolism with RNA: an overview of posttranscriptional controls of intracellular iron homeostasis. Wiley Interdiscip. Rev. RNA, 3, 26-36.
-
(2012)
Wiley Interdiscip. Rev. RNA
, vol.3
, pp. 26-36
-
-
Salvail, H.1
Massé, E.2
-
16
-
-
34249777280
-
The small RNA RyhB activates the translation of shiA mRNA encoding a permease of shikimate, a compound involved in siderophore synthesis
-
Prévost,K., Salvail,H., Desnoyers,G., Jacques,J., Phaneuf,E. and Massé,E. (2007) The small RNA RyhB activates the translation of shiA mRNA encoding a permease of shikimate, a compound involved in siderophore synthesis. Mol. Microbiol., 64, 1260-1273.
-
(2007)
Mol. Microbiol.
, vol.64
, pp. 1260-1273
-
-
Prévost, K.1
Salvail, H.2
Desnoyers, G.3
Jacques, J.4
Phaneuf, E.5
Massé, E.6
-
17
-
-
0141860088
-
Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli
-
Massé,E., Escorcia,F. and Gottesman,S. (2003) Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli. Genes Dev., 17, 2374-2383.
-
(2003)
Genes Dev.
, vol.17
, pp. 2374-2383
-
-
Massé, E.1
Escorcia, F.2
Gottesman, S.3
-
18
-
-
0032514643
-
Ribo regulation in Escherichia coli: DsrA RNA acts by RNA: RNA interactions at multiple loci
-
Lease,R., Cusick,M. and Belfort,M. (1998) Ribo regulation in Escherichia coli: DsrA RNA acts by RNA: RNA interactions at multiple loci. Proc. Natl. Acad. Sci. U.S.A., 95, 12456-12461.
-
(1998)
Proc. Natl. Acad. Sci. U.S.A.
, vol.95
, pp. 12456-12461
-
-
Lease, R.1
Cusick, M.2
Belfort, M.3
-
19
-
-
84883747448
-
RNA-mediated regulation in pathogenic bacteria
-
Caldelari,I., Chao,Y., Romby,P. and Vogel,J. (2013) RNA-mediated regulation in pathogenic bacteria. Cold Spring Harb. Perspect. Med., 3, a010298.
-
(2013)
Cold Spring Harb. Perspect. Med.
, vol.3
-
-
Caldelari, I.1
Chao, Y.2
Romby, P.3
Vogel, J.4
-
20
-
-
84986413039
-
Staphylococcal toxins in human disease
-
Arbuthnott,J., Coleman,D. and Azavedo,J. S. d. (1990) Staphylococcal toxins in human disease. J. Appl. Bacteriol., 69, 101S-107S.
-
(1990)
J. Appl. Bacteriol.
, vol.69
, pp. 101S-107S
-
-
Arbuthnott, J.1
Coleman, D.2
Azavedo, J.S.D.3
-
21
-
-
0031465699
-
Toxin involvement in staphylococcal scalded skin syndrome
-
Lina,G., Gillet,Y., Vandenesch,F., Jones,M., Floret,D. and Etienne,J. (1997) Toxin involvement in staphylococcal scalded skin syndrome. Clin. Infect. Dis., 25, 1369-1373.
-
(1997)
Clin. Infect. Dis.
, vol.25
, pp. 1369-1373
-
-
Lina, G.1
Gillet, Y.2
Vandenesch, F.3
Jones, M.4
Floret, D.5
Etienne, J.6
-
23
-
-
7444240913
-
Bacterial social engagements
-
Henke,J. and Bassler,B. (2004) Bacterial social engagements. Trends Cell Biol., 14, 648-656.
-
(2004)
Trends Cell Biol.
, vol.14
, pp. 648-656
-
-
Henke, J.1
Bassler, B.2
-
24
-
-
66749141589
-
At the crossroads of bacterial metabolism and virulence factor synthesis in Staphylococci
-
Somerville,G. and Proctor,R. (2009) At the crossroads of bacterial metabolism and virulence factor synthesis in Staphylococci. Microbiol. Mol. Biol. Rev., 73, 233-248.
-
(2009)
Microbiol. Mol. Biol. Rev.
, vol.73
, pp. 233-248
-
-
Somerville, G.1
Proctor, R.2
-
25
-
-
84885092754
-
A semi-quantitative model of Quorum-Sensing in Staphylococcus aureus, approved by microarray meta-analyses and tested by mutation studies
-
Audretsch,C., Lopez,D., Srivastava,M., Wolz,C. and Dandekar,T. (2013) A semi-quantitative model of Quorum-Sensing in Staphylococcus aureus, approved by microarray meta-analyses and tested by mutation studies. Mol. Biosyst., 9, 2665-2680.
-
(2013)
Mol. Biosyst.
, vol.9
, pp. 2665-2680
-
-
Audretsch, C.1
Lopez, D.2
Srivastava, M.3
Wolz, C.4
Dandekar, T.5
-
26
-
-
0037228459
-
Global regulation of Staphylococcus aureus genes by Rot
-
Said-Salim,B., Dunman,P., McAleese,F., Macapagal,D., Murphy,E., McNamara,P., Arvidson,S., Foster,T., Projan,S. and Kreiswirth,B. (2003) Global regulation of Staphylococcus aureus genes by Rot. J. Bacteriol., 185, 610-619.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 610-619
-
-
Said-Salim, B.1
Dunman, P.2
McAleese, F.3
Macapagal, D.4
Murphy, E.5
McNamara, P.6
Arvidson, S.7
Foster, T.8
Projan, S.9
Kreiswirth, B.10
-
27
-
-
33746561248
-
Inhibition of rot translation by RNAIII, a key feature of agr function
-
Geisinger,E., Adhikari,R., Jin,R., Ross,H. and Novick,R. (2006) Inhibition of rot translation by RNAIII, a key feature of agr function. Mol. Microbiol., 61, 1038-1048.
-
(2006)
Mol. Microbiol.
, vol.61
, pp. 1038-1048
-
-
Geisinger, E.1
Adhikari, R.2
Jin, R.3
Ross, H.4
Novick, R.5
-
28
-
-
34249881878
-
Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism
-
Boisset,S., Geissmann,T., Huntzinger,E., Fechter,P., Bendridi,N., Possedko,M., Chevalier,C., Helfer,A., Benito,Y., Jacquier,A. et al. (2007) Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanism. Genes Dev., 21, 1353-1366.
-
(2007)
Genes Dev.
, vol.21
, pp. 1353-1366
-
-
Boisset, S.1
Geissmann, T.2
Huntzinger, E.3
Fechter, P.4
Bendridi, N.5
Possedko, M.6
Chevalier, C.7
Helfer, A.8
Benito, Y.9
Jacquier, A.10
-
29
-
-
0029113833
-
Activation of alpha-toxin translation in Staphylococcus aureus by the trans-encoded antisense RNA, RNAIII
-
Morfeldt,E., Taylor,D., Von Gabain,A. and Arvidson,S. (1995) Activation of alpha-toxin translation in Staphylococcus aureus by the trans-encoded antisense RNA, RNAIII. EMBO J., 14, 4569.
-
(1995)
EMBO J.
, vol.14
, pp. 4569
-
-
Morfeldt, E.1
Taylor, D.2
Von Gabain, A.3
Arvidson, S.4
-
30
-
-
79955597012
-
Role of the accessory gene regulator agr in community-associated methicillin-resistant Staphylococcus aureus pathogenesis
-
Cheung,G., Wang,R., Khan,B., Sturdevant,D. and Otto,M. (2011) Role of the accessory gene regulator agr in community-associated methicillin-resistant Staphylococcus aureus pathogenesis. Infect. Immun., 79, 1927-1935.
-
(2011)
Infect. Immun.
, vol.79
, pp. 1927-1935
-
-
Cheung, G.1
Wang, R.2
Khan, B.3
Sturdevant, D.4
Otto, M.5
-
31
-
-
20144380295
-
Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression
-
Huntzinger,E., Boisset,S., Saveanu,C., Benito,Y., Geissmann,T., Namane,A., Lina,G., Etienne,J., Ehresmann,B., Ehresmann,C. et al. (2005) Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression. EMBO J., 24, 824-835.
-
(2005)
EMBO J.
, vol.24
, pp. 824-835
-
-
Huntzinger, E.1
Boisset, S.2
Saveanu, C.3
Benito, Y.4
Geissmann, T.5
Namane, A.6
Lina, G.7
Etienne, J.8
Ehresmann, B.9
Ehresmann, C.10
-
32
-
-
77950404950
-
Staphylococcus aureus RNAIII binds to two distant regions of coa mRNA to arrest translation and promote mRNA degradation
-
Chevalier,C., Boisset,S., Romilly,C., Masquida,B., Fechter,P., Geissmann,T., Vandenesch,F. and Romby,P. (2010) Staphylococcus aureus RNAIII binds to two distant regions of coa mRNA to arrest translation and promote mRNA degradation. PLoS Pathog., 6, e1000809.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Chevalier, C.1
Boisset, S.2
Romilly, C.3
Masquida, B.4
Fechter, P.5
Geissmann, T.6
Vandenesch, F.7
Romby, P.8
-
33
-
-
33846972643
-
Stochastic simulations of genetic switch systems
-
Loinger,A., Lipshtat,A., Balaban,N. and Biham,O. (2007) Stochastic simulations of genetic switch systems. Phys. Rev. E, 75, 021904.
-
(2007)
Phys. Rev. E
, vol.75
-
-
Loinger, A.1
Lipshtat, A.2
Balaban, N.3
Biham, O.4
-
34
-
-
33645429016
-
Exact stochastic simulation of coupled chemical reactions
-
Gillespie,D. (1977) Exact stochastic simulation of coupled chemical reactions. J. Phys. Chem., 81, 2340-2361.
-
(1977)
J. Phys. Chem.
, vol.81
, pp. 2340-2361
-
-
Gillespie, D.1
-
35
-
-
0027180031
-
Synthesis of staphylococcal virulence factors is controlled by a regulatory RNA molecule
-
Novick,R., Ross,H., Projan,S., Kornblum,J., Kreiswirth,B. and Moghazeh,S. (1993) Synthesis of staphylococcal virulence factors is controlled by a regulatory RNA molecule. EMBO J., 12, 3967-3975.
-
(1993)
EMBO J.
, vol.12
, pp. 3967-3975
-
-
Novick, R.1
Ross, H.2
Projan, S.3
Kornblum, J.4
Kreiswirth, B.5
Moghazeh, S.6
-
36
-
-
84863643686
-
Detection of Staphylococcus aureus delta-toxin production by whole-cell MALDI-TOF mass spectrometry
-
Gagnaire,J., Dauwalder,O., Boisset,S., Khau,D., Freydière,A., Ader,F., Bes,M., Lina,G., Tristan,A., Reverdy,M. et al. (2012) Detection of Staphylococcus aureus delta-toxin production by whole-cell MALDI-TOF mass spectrometry. PloS One, 7, e40660.
-
(2012)
PloS One
, vol.7
-
-
Gagnaire, J.1
Dauwalder, O.2
Boisset, S.3
Khau, D.4
Freydière, A.5
Ader, F.6
Bes, M.7
Lina, G.8
Tristan, A.9
Reverdy, M.10
-
37
-
-
33749642880
-
Transcriptional profiling of a Staphylococcus aureus clinical isolate and its isogenic agr and sarA mutants reveals global differences in comparison to the laboratory strain RN6390
-
Cassat,J., Dunman,P., Murphy,E., Projan,S., Beenken,K., Palm,K., Yang,S., Rice,K., Bayles,K. and Smeltzer,M. (2006) Transcriptional profiling of a Staphylococcus aureus clinical isolate and its isogenic agr and sarA mutants reveals global differences in comparison to the laboratory strain RN6390. Microbiology, 152, 3075-3090.
-
(2006)
Microbiology
, vol.152
, pp. 3075-3090
-
-
Cassat, J.1
Dunman, P.2
Murphy, E.3
Projan, S.4
Beenken, K.5
Palm, K.6
Yang, S.7
Rice, K.8
Bayles, K.9
Smeltzer, M.10
-
38
-
-
51649119387
-
Semiautomated and rapid quantification of nucleic acid footprinting and structure mapping experiments
-
Laederach,A., Das,R., Vicens,Q., Pearlman,S., Brenowitz,M., Herschlag,D. and Altman,R. (2008) Semiautomated and rapid quantification of nucleic acid footprinting and structure mapping experiments. Nat. Protoc., 3, 1395-1401.
-
(2008)
Nat. Protoc.
, vol.3
, pp. 1395-1401
-
-
Laederach, A.1
Das, R.2
Vicens, Q.3
Pearlman, S.4
Brenowitz, M.5
Herschlag, D.6
Altman, R.7
-
39
-
-
69949123436
-
Expression of the sarA family of genes in different strains of Staphylococcus aureus
-
Ballal,A. and Manna,A. (2009) Expression of the sarA family of genes in different strains of Staphylococcus aureus. Microbiology, 155, 2342-2352.
-
(2009)
Microbiology
, vol.155
, pp. 2342-2352
-
-
Ballal, A.1
Manna, A.2
-
40
-
-
84864015429
-
Allele-dependent differences in quorum-sensing dynamics result in variant expression of virulence genes in Staphylococcus aureus
-
Geisinger,E., Chen,J. and Novick,R. (2012) Allele-dependent differences in quorum-sensing dynamics result in variant expression of virulence genes in Staphylococcus aureus. J. Bacteriol., 194, 2854-2864.
-
(2012)
J. Bacteriol.
, vol.194
, pp. 2854-2864
-
-
Geisinger, E.1
Chen, J.2
Novick, R.3
-
41
-
-
0026010391
-
A temporal signal, independent of agr, is required for hla but not spa transcription in Staphylococcus aureus
-
Vandenesch,F., Kornblum,J. and Novick,R. (1991) A temporal signal, independent of agr, is required for hla but not spa transcription in Staphylococcus aureus. J. Bacteriol., 173, 6313-6320.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 6313-6320
-
-
Vandenesch, F.1
Kornblum, J.2
Novick, R.3
-
42
-
-
0028858112
-
Translation of RNAIII, the Staphylococcus aureusagr regulatory RNA molecule, can be activated by a 3'-end deletion
-
Balaban,N. and Novick,R. (1995) Translation of RNAIII, the Staphylococcus aureusagr regulatory RNA molecule, can be activated by a 3′-end deletion. FEMS Microbiol. Lett., 133, 155-161.
-
(1995)
FEMS Microbiol. Lett.
, vol.133
, pp. 155-161
-
-
Balaban, N.1
Novick, R.2
-
43
-
-
0031777834
-
Regulation of agr-dependent virulence genes in Staphylococcus aureus by RNAIII from coagulase-negative staphylococci
-
Tegmark,K., Morfeldt,E. and Arvidson,S. (1998) Regulation of agr-dependent virulence genes in Staphylococcus aureus by RNAIII from coagulase-negative staphylococci. J. Bacteriol., 180, 3181-3186.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 3181-3186
-
-
Tegmark, K.1
Morfeldt, E.2
Arvidson, S.3
-
44
-
-
77950369224
-
Growth phase-dependent regulation of the global virulence regulator Rot in clinical isolates of Staphylococcus aureus
-
Jelsbak,L., Hemmingsen,L., Donat,S., Ohlsen,K., Boye,K., Westh,H., Ingmer,H. and Frees,D. (2010) Growth phase-dependent regulation of the global virulence regulator Rot in clinical isolates of Staphylococcus aureus. Int. J. Med. Microbiol., 300, 229-236.
-
(2010)
Int. J. Med. Microbiol.
, vol.300
, pp. 229-236
-
-
Jelsbak, L.1
Hemmingsen, L.2
Donat, S.3
Ohlsen, K.4
Boye, K.5
Westh, H.6
Ingmer, H.7
Frees, D.8
-
45
-
-
34748871477
-
Regulation of gene expression by small non-coding RNAs: A quantitative view
-
Shimoni,Y., Friedlander,G., Hetzroni,G., Niv,G., Altuvia,S., Biham,O. and Margalit,H. (2007) Regulation of gene expression by small non-coding RNAs: a quantitative view. Mol. Syst. Biol., 3, 138.
-
(2007)
Mol. Syst. Biol.
, vol.3
, pp. 138
-
-
Shimoni, Y.1
Friedlander, G.2
Hetzroni, G.3
Niv, G.4
Altuvia, S.5
Biham, O.6
Margalit, H.7
-
46
-
-
84858866772
-
A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli
-
Thomason,M., Fontaine,F., De Lay,N. and Storz,G. (2012) A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli. Mol. Microbiol., 84, 17-35.
-
(2012)
Mol. Microbiol.
, vol.84
, pp. 17-35
-
-
Thomason, M.1
Fontaine, F.2
De Lay, N.3
Storz, G.4
-
47
-
-
84858867080
-
The csgD mRNA as a hub for signal integration via multiple small RNAs
-
Boehm,A. and Vogel,J. (2012) The csgD mRNA as a hub for signal integration via multiple small RNAs. Mol. Microbiol., 84, 1-5.
-
(2012)
Mol. Microbiol.
, vol.84
, pp. 1-5
-
-
Boehm, A.1
Vogel, J.2
-
48
-
-
84906330407
-
Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coli
-
Mika,F. and Hengge,R. (2014) Small RNAs in the control of RpoS, CsgD, and biofilm architecture of Escherichia coli. RNA Biol., 11, 494-507.
-
(2014)
RNA Biol.
, vol.11
, pp. 494-507
-
-
Mika, F.1
Hengge, R.2
-
49
-
-
84868094684
-
A complex network of small non-coding RNAs regulate motility in Escherichia coli
-
De Lay,N. and Gottesman,S. (2012) A complex network of small non-coding RNAs regulate motility in Escherichia coli. Mol. Microbiol., 86, 524-538.
-
(2012)
Mol. Microbiol.
, vol.86
, pp. 524-538
-
-
De Lay, N.1
Gottesman, S.2
-
50
-
-
72049100690
-
DksA and ppGpp directly regulate transcription of the Escherichia coli flagellar cascade
-
Lemke,J., Durfee,T. and Gourse,R. (2009) DksA and ppGpp directly regulate transcription of the Escherichia coli flagellar cascade. Mol. Microbiol., 74, 1368-1379.
-
(2009)
Mol. Microbiol.
, vol.74
, pp. 1368-1379
-
-
Lemke, J.1
Durfee, T.2
Gourse, R.3
-
51
-
-
0036714331
-
Signal transduction and regulatory mechanisms involved in control of the σS (RpoS) subunit of RNA polymerase
-
Hengge-Aronis,R. (2002) Signal transduction and regulatory mechanisms involved in control of the σS (RpoS) subunit of RNA polymerase. Microbiol. Mol. Biol. Rev., 66, 373-395.
-
(2002)
Microbiol. Mol. Biol. Rev.
, vol.66
, pp. 373-395
-
-
Hengge-Aronis, R.1
-
52
-
-
0016123587
-
Regulation of the β-Glucoside System in Escherchia coli K-12
-
Prasad,I. and Schaefler,S. (1974) Regulation of the β-Glucoside System in Escherchia coli K-12. J. Bacteriol., 120, 638-650.
-
(1974)
J. Bacteriol.
, vol.120
, pp. 638-650
-
-
Prasad, I.1
Schaefler, S.2
-
53
-
-
0023188223
-
Beta-glucoside (bgl) operon of Escherichia coli K-12: Nucleotide sequence, genetic organization, and possible evolutionary relationship to regulatory components of two Bacillus subtilis genes
-
Schnetz,K., Toloczyki,C. and Rak,B. (1987) Beta-glucoside (bgl) operon of Escherichia coli K-12: nucleotide sequence, genetic organization, and possible evolutionary relationship to regulatory components of two Bacillus subtilis genes. J. Bacteriol., 169, 2579-2590.
-
(1987)
J. Bacteriol.
, vol.169
, pp. 2579-2590
-
-
Schnetz, K.1
Toloczyki, C.2
Rak, B.3
-
54
-
-
78649664707
-
BglJ-RcsB heterodimers relieve repression of the Escherichia coli bgl operon by H-NS
-
Venkatesh,G., Koungni,F., Paukner,A., Stratmann,T., Blissenbach,B. and Schnetz,K. (2010) BglJ-RcsB heterodimers relieve repression of the Escherichia coli bgl operon by H-NS. J. Bacteriol., 192, 6456-6464.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 6456-6464
-
-
Venkatesh, G.1
Koungni, F.2
Paukner, A.3
Stratmann, T.4
Blissenbach, B.5
Schnetz, K.6
-
55
-
-
0042665860
-
RcsCDB His-Asp phosphorelay system negatively regulates the flhDC operon in Escherichia coli
-
Francez-Charlot,A., Laugel,B., Van Gemert,A., Dubarry,N., Wiorowski,F., Castanié-Cornet,M., Gutierrez,C. and Cam,K. (2003) RcsCDB His-Asp phosphorelay system negatively regulates the flhDC operon in Escherichia coli. Mol. Microbiol., 49, 823-832.
-
(2003)
Mol. Microbiol.
, vol.49
, pp. 823-832
-
-
Francez-Charlot, A.1
Laugel, B.2
Van Gemert, A.3
Dubarry, N.4
Wiorowski, F.5
Castanié-Cornet, M.6
Gutierrez, C.7
Cam, K.8
-
56
-
-
77954313973
-
RcsB plays a central role in H-NS-dependent regulation of motility and acid stress resistance in Escherichia coli
-
Krin,E., Danchin,A. and Soutourina,O. (2010) RcsB plays a central role in H-NS-dependent regulation of motility and acid stress resistance in Escherichia coli. Res. Microbiol., 161, 363-371.
-
(2010)
Res. Microbiol.
, vol.161
, pp. 363-371
-
-
Krin, E.1
Danchin, A.2
Soutourina, O.3
-
57
-
-
1942532920
-
The histone-like nucleoid structuring protein H-NS represses the Escherichia coli bgl operon downstream of the promoter
-
Dole,S., Nagarajavel,V. and Schnetz,K. (2004) The histone-like nucleoid structuring protein H-NS represses the Escherichia coli bgl operon downstream of the promoter. Mol. Microbiol., 52, 589-600.
-
(2004)
Mol. Microbiol.
, vol.52
, pp. 589-600
-
-
Dole, S.1
Nagarajavel, V.2
Schnetz, K.3
-
58
-
-
0032796421
-
Multiple control of flagellum biosynthesis in Escherichia coli: Role of H-NS protein and the cyclic AMP-catabolite activator protein complex in transcription of the flhDC master operon
-
Soutourina,O., Kolb,A., Krin,E., Laurent-Winter,C., Rimsky,S., Danchin,A. and Bertin,P. (1999) Multiple control of flagellum biosynthesis in Escherichia coli: role of H-NS protein and the cyclic AMP-catabolite activator protein complex in transcription of the flhDC master operon. J. Bacteriol., 181, 7500-7508.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 7500-7508
-
-
Soutourina, O.1
Kolb, A.2
Krin, E.3
Laurent-Winter, C.4
Rimsky, S.5
Danchin, A.6
Bertin, P.7
-
59
-
-
0142027814
-
Structure and function of the feed-forward loop network motif
-
Mangan,S. and Alon,U. (2003) Structure and function of the feed-forward loop network motif. Proc. Natl. Acad Sci., 100, 11980-11985.
-
(2003)
Proc. Natl. Acad Sci.
, vol.100
, pp. 11980-11985
-
-
Mangan, S.1
Alon, U.2
-
60
-
-
79251559383
-
The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli
-
Beisel,C. and Storz,G. (2011) The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli. Mol. Cell, 41, 286-297.
-
(2011)
Mol. Cell
, vol.41
, pp. 286-297
-
-
Beisel, C.1
Storz, G.2
-
61
-
-
34548668642
-
Quantitative characteristics of gene regulation by small RNA
-
Levine,E., Zhang,Z., Kuhlman,T. and Hwa,T. (2007) Quantitative characteristics of gene regulation by small RNA. PLoS Biol., 5, e229.
-
(2007)
PLoS Biol.
, vol.5
, pp. e229
-
-
Levine, E.1
Zhang, Z.2
Kuhlman, T.3
Hwa, T.4
-
62
-
-
77958028354
-
Regulatory RNA in bacterial pathogens
-
Papenfort,K. and Vogel,J. (2010) Regulatory RNA in bacterial pathogens. Cell Host Microbe, 8, 116-127.
-
(2010)
Cell Host Microbe
, vol.8
, pp. 116-127
-
-
Papenfort, K.1
Vogel, J.2
-
63
-
-
3142564584
-
The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae
-
Lenz,D., Mok,K., Lilley,B., Kulkarni,R., Wingreen,N. and Bassler,B. (2004) The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae. Cell, 118, 69-82.
-
(2004)
Cell
, vol.118
, pp. 69-82
-
-
Lenz, D.1
Mok, K.2
Lilley, B.3
Kulkarni, R.4
Wingreen, N.5
Bassler, B.6
-
64
-
-
76849115266
-
Negative feedback loops involving small regulatory RNAs precisely control the Vibrio harveyi quorum-sensing response
-
Tu,K., Long,T., Svenningsen,S., Wingreen,N. and Bassler,B. (2010) Negative feedback loops involving small regulatory RNAs precisely control the Vibrio harveyi quorum-sensing response. Mol. Cell, 37, 567-579.
-
(2010)
Mol. Cell
, vol.37
, pp. 567-579
-
-
Tu, K.1
Long, T.2
Svenningsen, S.3
Wingreen, N.4
Bassler, B.5
-
65
-
-
84873165273
-
Post-transcriptional regulation on a global scale: Form and function of Csr/Rsm systems
-
Romeo,T., Vakulskas,C. and Babitzke,P. (2013) Post-transcriptional regulation on a global scale: form and function of Csr/Rsm systems. Environ. Microbiol., 15, 313-324.
-
(2013)
Environ. Microbiol.
, vol.15
, pp. 313-324
-
-
Romeo, T.1
Vakulskas, C.2
Babitzke, P.3
-
66
-
-
0036771636
-
σB modulates virulence determinant expression and stress resistance: Characterization of a functional rsbU strain derived from Staphylococcus aureus 8325-4
-
Horsburgh,M., Aish,J., White,I., Shaw,L., Lithgow,J. and Foster,S. (2002) σB modulates virulence determinant expression and stress resistance: characterization of a functional rsbU strain derived from Staphylococcus aureus 8325-4. J. Bacteriol., 184, 5457-5467.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 5457-5467
-
-
Horsburgh, M.1
Aish, J.2
White, I.3
Shaw, L.4
Lithgow, J.5
Foster, S.6
-
67
-
-
77952700194
-
Repair of global regulators in Staphylococcus aureus 8325 and comparative analysis with other clinical isolates
-
Herbert,S., Ziebandt,A., Ohlsen,K., Scha¨fer,T., Hecker,M., Albrecht,D., Novick,R. and Götz,F. (2010) Repair of global regulators in Staphylococcus aureus 8325 and comparative analysis with other clinical isolates. Infect. Immun., 78, 2877-2889.
-
(2010)
Infect. Immun.
, vol.78
, pp. 2877-2889
-
-
Herbert, S.1
Ziebandt, A.2
Ohlsen, K.3
Scha¨fer, T.4
Hecker, M.5
Albrecht, D.6
Novick, R.7
Götz, F.8
-
68
-
-
84861306939
-
The expression of small regulatory RNAs in clinical samples reflects the different life styles of Staphylococcus aureus in colonization vs. infection
-
Song,J., Lays,C., Vandenesch,F., Benito,Y., Bes,M., Chu,Y., Lina,G., Romby,P., Geissmann,T. and Boisset,S. (2012) The expression of small regulatory RNAs in clinical samples reflects the different life styles of Staphylococcus aureus in colonization vs. infection. PloS One, 7, e37294.
-
(2012)
PloS One
, vol.7
-
-
Song, J.1
Lays, C.2
Vandenesch, F.3
Benito, Y.4
Bes, M.5
Chu, Y.6
Lina, G.7
Romby, P.8
Geissmann, T.9
Boisset, S.10
-
69
-
-
79953268826
-
The Staphylococcus aureus RNome and its commitment to virulence
-
Felden,B., Vandenesch,F., Bouloc,P. and Romby,P. (2011) The Staphylococcus aureus RNome and its commitment to virulence. PLoS Pathog., 7, e1002006.
-
(2011)
PLoS Pathog.
, vol.7
-
-
Felden, B.1
Vandenesch, F.2
Bouloc, P.3
Romby, P.4
-
70
-
-
0033963304
-
Direct quantitative transcript analysis of the agr regulon of Staphylococcus aureus during human infection in comparison to the expression profile in vitro
-
Goerke,C., Campana,S., Bayer,M., Döring,G., Botzenhart,K. and Wolz,C. (2000) Direct quantitative transcript analysis of the agr regulon of Staphylococcus aureus during human infection in comparison to the expression profile in vitro. Infect. Immun., 68, 1304-1311.
-
(2000)
Infect. Immun.
, vol.68
, pp. 1304-1311
-
-
Goerke, C.1
Campana, S.2
Bayer, M.3
Döring, G.4
Botzenhart, K.5
Wolz, C.6
-
71
-
-
58849131103
-
Virulence gene expression in human community-acquired Staphylococcus aureus infection
-
Loughman,J., Fritz,S., Storch,G. and Hunstad,D. (2009) Virulence gene expression in human community-acquired Staphylococcus aureus infection. J. Infect. Dis., 199, 294-301.
-
(2009)
J. Infect. Dis.
, vol.199
, pp. 294-301
-
-
Loughman, J.1
Fritz, S.2
Storch, G.3
Hunstad, D.4
-
72
-
-
77950920890
-
Temporal expression of adhesion factors and activity of global regulators during establishment of Staphylococcus aureus nasal colonization
-
Burian,M., Rautenberg,M., Kohler,T., Fritz,M., Krismer,B., Unger,C., Hoffman,W., Peschel,A., Wolz,C. and Goerke,C. (2010) Temporal expression of adhesion factors and activity of global regulators during establishment of Staphylococcus aureus nasal colonization. J. Infect. Dis., 201, 1414-1421.
-
(2010)
J. Infect. Dis.
, vol.201
, pp. 1414-1421
-
-
Burian, M.1
Rautenberg, M.2
Kohler, T.3
Fritz, M.4
Krismer, B.5
Unger, C.6
Hoffman, W.7
Peschel, A.8
Wolz, C.9
Goerke, C.10
-
73
-
-
84867800804
-
From genotype to phenotype: Can systems biology be used to predict Staphylococcus aureus virulence?
-
Priest,N. K., Rudkin,J., Feil,E., Van Den Elsen,J., Cheung,A., Peacock,S., Laabei,M., Lucks,D., Recker,M. and Massey,R. (2012) From genotype to phenotype: can systems biology be used to predict Staphylococcus aureus virulence? Nat. Rev. Microbiol., 10, 791-797.
-
(2012)
Nat. Rev. Microbiol.
, vol.10
, pp. 791-797
-
-
Priest, N.K.1
Rudkin, J.2
Feil, E.3
Van Den Elsen, J.4
Cheung, A.5
Peacock, S.6
Laabei, M.7
Lucks, D.8
Recker, M.9
Massey, R.10
-
74
-
-
33748953866
-
Genetic parts to program bacteria
-
Voigt,C. (2006) Genetic parts to program bacteria. Curr. Opin. Biotechnol., 17, 548-557.
-
(2006)
Curr. Opin. Biotechnol.
, vol.17
, pp. 548-557
-
-
Voigt, C.1
-
75
-
-
36248967767
-
Engineering and applications of genetic circuits
-
Sayut,D., Kambam,P. and Sun,L. (2007) Engineering and applications of genetic circuits. Mol. Biosyst., 3, 835-840.
-
(2007)
Mol. Biosyst.
, vol.3
, pp. 835-840
-
-
Sayut, D.1
Kambam, P.2
Sun, L.3
-
76
-
-
84904320813
-
Metabolic reprogramming under microaerobic and anaerobic conditions in bacteria
-
Springer
-
Shan,Y., Lai,Y. and Yan,A. (2012) Metabolic reprogramming under microaerobic and anaerobic conditions in bacteria. In: Reprogramming Microbial Metabolic Pathways. Springer, pp. 159-179.
-
(2012)
Reprogramming Microbial Metabolic Pathways
, pp. 159-179
-
-
Shan, Y.1
Lai, Y.2
Yan, A.3
-
77
-
-
84898992684
-
Transcriptional regulation by BglJ-RcsB, a pleiotropic heteromeric activator in Escherichia coli
-
Salscheider,S.L., Jahn,A. and Schnetz,K. (2014) Transcriptional regulation by BglJ-RcsB, a pleiotropic heteromeric activator in Escherichia coli. Nucleic Acids Res., 42, 2999-3000.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. 2999-3000
-
-
Salscheider, S.L.1
Jahn, A.2
Schnetz, K.3
|