메뉴 건너뛰기




Volumn 64, Issue 5, 2007, Pages 1260-1273

The small RNA RyhB activates the translation of shiA mRNA encoding a permease of shikimate, a compound involved in siderophore synthesis

Author keywords

[No Author keywords available]

Indexed keywords

ENTEROCHELIN; IRON; MESSENGER RNA; MUTANT PROTEIN; PERMEASE; SHIKIMIC ACID; SIDEROPHORE; TRANSFER RNA;

EID: 34249777280     PISSN: 0950382X     EISSN: 13652958     Source Type: Journal    
DOI: 10.1111/j.1365-2958.2007.05733.x     Document Type: Article
Times cited : (187)

References (40)
  • 1
    • 0019888537 scopus 로고
    • Evidence for two functional gal promoters in intact Escherichia coli cells
    • Aiba, H., Adhya, S. de Crombrugghe, B. (1981) Evidence for two functional gal promoters in intact Escherichia coli cells. J Biol Chem 256: 11905 11910.
    • (1981) J Biol Chem , vol.256 , pp. 11905-11910
    • Aiba, H.1    Adhya, S.2    De Crombrugghe, B.3
  • 2
    • 0032716841 scopus 로고    scopus 로고
    • Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
    • Ali Azam, T., Iwata, A., Nishimura, A., Ueda, S. Ishihama, A. (1999) Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid. J Bacteriol 181: 6361 6370.
    • (1999) J Bacteriol , vol.181 , pp. 6361-6370
    • Ali Azam, T.1    Iwata, A.2    Nishimura, A.3    Ueda, S.4    Ishihama, A.5
  • 3
    • 0026724913 scopus 로고
    • Overexpression and purification of ferric enterobactin esterase from Escherichia coli: Demonstration of enzymatic hydrolysis of enterobactin and its iron complex
    • Brickman, T.J. McIntosh, M.A. (1992) Overexpression and purification of ferric enterobactin esterase from Escherichia coli: demonstration of enzymatic hydrolysis of enterobactin and its iron complex. J Biol Chem 267: 12350 12355.
    • (1992) J Biol Chem , vol.267 , pp. 12350-12355
    • Brickman, T.J.1    McIntosh, M.A.2
  • 4
    • 0029889596 scopus 로고    scopus 로고
    • Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq gene
    • Brown, L. Elliott, T. (1996) Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq gene. J Bacteriol 178: 3763 3770.
    • (1996) J Bacteriol , vol.178 , pp. 3763-3770
    • Brown, L.1    Elliott, T.2
  • 5
    • 27644482393 scopus 로고    scopus 로고
    • Lost in translation: The influence of ribosomes on bacterial mRNA decay
    • Deana, A. Belasco, J.G. (2005) Lost in translation: the influence of ribosomes on bacterial mRNA decay. Genes Dev 19: 2526 2533.
    • (2005) Genes Dev , vol.19 , pp. 2526-2533
    • Deana, A.1    Belasco, J.G.2
  • 6
    • 0018168088 scopus 로고
    • Constitutive expression of the iron-enterochelin and ferrichrome uptake systems in a mutant strain of Salmonella typhimurium
    • Ernst, J.F., Bennett, R.L. Rothfield, L.I. (1978) Constitutive expression of the iron-enterochelin and ferrichrome uptake systems in a mutant strain of Salmonella typhimurium. J Bacteriol 135: 928 934.
    • (1978) J Bacteriol , vol.135 , pp. 928-934
    • Ernst, J.F.1    Bennett, R.L.2    Rothfield, L.I.3
  • 7
    • 20644462362 scopus 로고    scopus 로고
    • Micros for microbes: Non-coding regulatory RNAs in bacteria
    • Gottesman, S. (2005) Micros for microbes: non-coding regulatory RNAs in bacteria. Trends Genet 21: 399 404.
    • (2005) Trends Genet , vol.21 , pp. 399-404
    • Gottesman, S.1
  • 8
    • 0017815076 scopus 로고
    • Enzymatic hydrolysis of enterochelin and its iron complex in Escherichia coli K-12: Properties of enterochelin esterase
    • Greenwood, K.T. Luke, R.K. (1978) Enzymatic hydrolysis of enterochelin and its iron complex in Escherichia coli K-12: properties of enterochelin esterase. Biochim Biophys Acta 525: 209 218.
    • (1978) Biochim Biophys Acta , vol.525 , pp. 209-218
    • Greenwood, K.T.1    Luke, R.K.2
  • 9
    • 0029818614 scopus 로고    scopus 로고
    • The role of fur in the acid tolerance response of Salmonella typhimurium is physiologically and genetically separable from its role in iron acquisition
    • Hall, H.K. Foster, J.W. (1996) The role of fur in the acid tolerance response of Salmonella typhimurium is physiologically and genetically separable from its role in iron acquisition. J Bacteriol 178: 5683 5691.
    • (1996) J Bacteriol , vol.178 , pp. 5683-5691
    • Hall, H.K.1    Foster, J.W.2
  • 10
    • 0017691115 scopus 로고
    • Iron transport in Escherichia coli K-12. 2,3-dihydroxybenzoate-promoted iron uptake
    • Hancock, R.E., Hantke, K. Braun, V. (1977) Iron transport in Escherichia coli K-12. 2,3-dihydroxybenzoate-promoted iron uptake. Arch Microbiol 114: 231 239.
    • (1977) Arch Microbiol , vol.114 , pp. 231-239
    • Hancock, R.E.1    Hantke, K.2    Braun, V.3
  • 11
    • 0019447069 scopus 로고
    • Regulation of ferric iron transport in Escherichia coli K12: Isolation of a constitutive mutant
    • Hantke, K. (1981) Regulation of ferric iron transport in Escherichia coli K12: isolation of a constitutive mutant. Mol Gen Genet 182: 288 292.
    • (1981) Mol Gen Genet , vol.182 , pp. 288-292
    • Hantke, K.1
  • 12
    • 0035069457 scopus 로고    scopus 로고
    • Iron and metal regulation in bacteria
    • Hantke, K. (2001) Iron and metal regulation in bacteria. Curr Opin Microbiol 4: 172 177.
    • (2001) Curr Opin Microbiol , vol.4 , pp. 172-177
    • Hantke, K.1
  • 14
    • 33645065589 scopus 로고    scopus 로고
    • Iron-sulphur clusters and the problem with oxygen
    • Imlay, J.A. (2006) Iron-sulphur clusters and the problem with oxygen. Mol Microbiol 59: 1073 1082.
    • (2006) Mol Microbiol , vol.59 , pp. 1073-1082
    • Imlay, J.A.1
  • 15
    • 33750443276 scopus 로고    scopus 로고
    • RyhB small RNA modulates the free intracellular iron pool and is essential for normal growth during iron limitation in Escherichia coli
    • Jacques, J.F., Jang, S., Prevost, K., Desnoyers, G., Desmarais, M., Imlay, J. Massé, E. (2006) RyhB small RNA modulates the free intracellular iron pool and is essential for normal growth during iron limitation in Escherichia coli. Mol Microbiol 62: 1181 1190.
    • (2006) Mol Microbiol , vol.62 , pp. 1181-1190
    • Jacques, J.F.1    Jang, S.2    Prevost, K.3    Desnoyers, G.4    Desmarais, M.5    Imlay, J.6    Massé, E.7
  • 16
    • 33750043437 scopus 로고    scopus 로고
    • Translation initiation and the fate of bacterial mRNAs
    • Kaberdin, V.R. Blasi, U. (2006) Translation initiation and the fate of bacterial mRNAs. FEMS Microbiol Rev 30: 967 979.
    • (2006) FEMS Microbiol Rev , vol.30 , pp. 967-979
    • Kaberdin, V.R.1    Blasi, U.2
  • 18
    • 0034730125 scopus 로고    scopus 로고
    • A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structures
    • Lease, R.A. Belfort, M. (2000) A trans-acting RNA as a control switch in Escherichia coli: dsrA modulates function by forming alternative structures. Proc Natl Acad Sci USA 97: 9919 9924.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 9919-9924
    • Lease, R.A.1    Belfort, M.2
  • 19
    • 0027230853 scopus 로고
    • Role of iron in regulation of virulence genes
    • Litwin, C.M. Calderwood, S.B. (1993) Role of iron in regulation of virulence genes. Clin Microbiol Rev 6: 137 149.
    • (1993) Clin Microbiol Rev , vol.6 , pp. 137-149
    • Litwin, C.M.1    Calderwood, S.B.2
  • 20
    • 0032514739 scopus 로고    scopus 로고
    • DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription
    • Majdalani, N., Cunning, C., Sledjeski, D., Elliott, T. Gottesman, S. (1998) DsrA RNA regulates translation of RpoS message by an anti-antisense mechanism, independent of its action as an antisilencer of transcription. Proc Natl Acad Sci USA 95: 12462 12467.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 12462-12467
    • Majdalani, N.1    Cunning, C.2    Sledjeski, D.3    Elliott, T.4    Gottesman, S.5
  • 21
    • 22744439747 scopus 로고    scopus 로고
    • Ironing out the problem: New mechanisms of iron homeostasis
    • Massé, E. Arguin, M. (2005) Ironing out the problem: new mechanisms of iron homeostasis. Trends Biochem Sci 30: 462 468.
    • (2005) Trends Biochem Sci , vol.30 , pp. 462-468
    • Massé, E.1    Arguin, M.2
  • 22
    • 0037007078 scopus 로고    scopus 로고
    • A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli
    • Massé, E. Gottesman, S. (2002) A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli. Proc Natl Acad Sci USA 99: 4620 4625.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 4620-4625
    • Massé, E.1    Gottesman, S.2
  • 23
    • 0141860088 scopus 로고    scopus 로고
    • Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli
    • Massé, E., Escorcia, F.E. Gottesman, S. (2003) Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli. Genes Dev 17: 2374 2383.
    • (2003) Genes Dev , vol.17 , pp. 2374-2383
    • Massé, E.1    Escorcia, F.E.2    Gottesman, S.3
  • 24
    • 26444505976 scopus 로고    scopus 로고
    • Effect of RyhB small RNA on global iron use in Escherichia coli
    • Massé, E., Vanderpool, C.K. Gottesman, S. (2005) Effect of RyhB small RNA on global iron use in Escherichia coli. J Bacteriol 187: 6962 6971.
    • (2005) J Bacteriol , vol.187 , pp. 6962-6971
    • Massé, E.1    Vanderpool, C.K.2    Gottesman, S.3
  • 26
    • 0142240435 scopus 로고    scopus 로고
    • Coincident Hfq binding and RNase e cleavage sites on mRNA and small regulatory RNAs
    • Moll, I., Afonyushkin, T., Vytvytska, O., Kaberdin, V.R. Blasi, U. (2003) Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAs. RNA 9: 1308 1314.
    • (2003) RNA , vol.9 , pp. 1308-1314
    • Moll, I.1    Afonyushkin, T.2    Vytvytska, O.3    Kaberdin, V.R.4    Blasi, U.5
  • 28
    • 33645508496 scopus 로고    scopus 로고
    • Translational repression is sufficient for gene silencing by bacterial small noncoding RNAs in the absence of mRNA destruction
    • Morita, T., Mochizuki, Y. Aiba, H. (2006) Translational repression is sufficient for gene silencing by bacterial small noncoding RNAs in the absence of mRNA destruction. Proc Natl Acad Sci USA 103: 4858 4863.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 4858-4863
    • Morita, T.1    Mochizuki, Y.2    Aiba, H.3
  • 29
    • 0025278585 scopus 로고
    • Control of Escherichia coli superoxide dismutase (sodA and sodB) genes by the ferric uptake regulation (fur) locus
    • Niederhoffer, E.C., Naranjo, C.M., Bradley, K.L. Fee, J.A. (1990) Control of Escherichia coli superoxide dismutase (sodA and sodB) genes by the ferric uptake regulation (fur) locus. J Bacteriol 172: 1930 1938.
    • (1990) J Bacteriol , vol.172 , pp. 1930-1938
    • Niederhoffer, E.C.1    Naranjo, C.M.2    Bradley, K.L.3    Fee, J.A.4
  • 31
    • 0038187589 scopus 로고    scopus 로고
    • Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: The RpoS paradigm
    • Repoila, F., Majdalani, N. Gottesman, S. (2003) Small non-coding RNAs, co-ordinators of adaptation processes in Escherichia coli: the RpoS paradigm. Mol Microbiol 48: 855 861.
    • (2003) Mol Microbiol , vol.48 , pp. 855-861
    • Repoila, F.1    Majdalani, N.2    Gottesman, S.3
  • 32
    • 0023255472 scopus 로고
    • Improved single and multicopy lac-based cloning vectors for protein and operon fusions
    • Simons, R.W., Houman, F. Kleckner, N. (1987) Improved single and multicopy lac-based cloning vectors for protein and operon fusions. Gene 53: 85 96.
    • (1987) Gene , vol.53 , pp. 85-96
    • Simons, R.W.1    Houman, F.2    Kleckner, N.3
  • 33
    • 0029739317 scopus 로고    scopus 로고
    • The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coli
    • Sledjeski, D.D., Gupta, A. Gottesman, S. (1996) The small RNA, DsrA, is essential for the low temperature expression of RpoS during exponential growth in Escherichia coli. EMBO J 15: 3993 4000.
    • (1996) EMBO J , vol.15 , pp. 3993-4000
    • Sledjeski, D.D.1    Gupta, A.2    Gottesman, S.3
  • 34
    • 0028327173 scopus 로고
    • Fur regulon in gram-negative bacteria: Identification and characterization of new iron-regulated Escherichia coli genes by a fur titration assay
    • Stojiljkovic, I., Baumler, A.J. Hantke, K. (1994) Fur regulon in gram-negative bacteria: identification and characterization of new iron-regulated Escherichia coli genes by a Fur titration assay. J Mol Biol 236: 531 545.
    • (1994) J Mol Biol , vol.236 , pp. 531-545
    • Stojiljkovic, I.1    Baumler, A.J.2    Hantke, K.3
  • 35
    • 0028362445 scopus 로고
    • Structure of the 5′ upstream region and the regulation of the rpoS gene of Escherichia coli
    • Takayanagi, Y., Tanaka, K. Takahashi, H. (1994) Structure of the 5′ upstream region and the regulation of the rpoS gene of Escherichia coli. Mol Gen Genet 243: 525 531.
    • (1994) Mol Gen Genet , vol.243 , pp. 525-531
    • Takayanagi, Y.1    Tanaka, K.2    Takahashi, H.3
  • 36
    • 0027255374 scopus 로고
    • Iron and oxygen regulation of Escherichia coli MnSOD expression: Competition between the global regulators fur and ArcA for binding to DNA
    • Tardat, B. Touati, D. (1993) Iron and oxygen regulation of Escherichia coli MnSOD expression: competition between the global regulators Fur and ArcA for binding to DNA. Mol Microbiol 9: 53 63.
    • (1993) Mol Microbiol , vol.9 , pp. 53-63
    • Tardat, B.1    Touati, D.2
  • 37
    • 0028243445 scopus 로고
    • Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12
    • Tsui, H.C., Leung, H.C. Winkler, M.E. (1994) Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12. Mol Microbiol 13: 35 49.
    • (1994) Mol Microbiol , vol.13 , pp. 35-49
    • Tsui, H.C.1    Leung, H.C.2    Winkler, M.E.3
  • 38
    • 0032564363 scopus 로고    scopus 로고
    • Host factor I, Hfq, binds to Escherichia coli ompA mRNA in a growth rate-dependent fashion and regulates its stability
    • Vytvytska, O., Jakobsen, J.S., Balcunaite, G., Andersen, J.S., Baccarini, M. von Gabain, A. (1998) Host factor I, Hfq, binds to Escherichia coli ompA mRNA in a growth rate-dependent fashion and regulates its stability. Proc Natl Acad Sci USA 95: 14118 14123.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 14118-14123
    • Vytvytska, O.1    Jakobsen, J.S.2    Balcunaite, G.3    Andersen, J.S.4    Baccarini, M.5    Von Gabain, A.6
  • 39
    • 0032536881 scopus 로고    scopus 로고
    • Cloning and analysis of the shiA gene, which encodes the shikimate transport system of Escherichia coli K-12
    • Whipp, M.J., Camakaris, H. Pittard, A.J. (1998) Cloning and analysis of the shiA gene, which encodes the shikimate transport system of Escherichia coli K-12. Gene 209: 185 192.
    • (1998) Gene , vol.209 , pp. 185-192
    • Whipp, M.J.1    Camakaris, H.2    Pittard, A.J.3
  • 40
    • 0036163624 scopus 로고    scopus 로고
    • The sm-like Hfq protein increases OxyS RNA interaction with target mRNAs
    • Zhang, A., Wassarman, K.M., Ortega, J., Steven, A.C. Storz, G. (2002) The sm-like Hfq protein increases OxyS RNA interaction with target mRNAs. Mol Cell 9: 11 22.
    • (2002) Mol Cell , vol.9 , pp. 11-22
    • Zhang, A.1    Wassarman, K.M.2    Ortega, J.3    Steven, A.C.4    Storz, G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.