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Volumn 112, Issue 17, 2015, Pages E2191-E2200

Convergent evolution toward an improved growth rate and a reduced resistance range in Prochlorococcus strains resistant to phage

Author keywords

Cyanobacteria; Cyanophage; Prochlorococcus; Resistance; Virus

Indexed keywords

ARTICLE; BACTERIAL STRAIN; BACTERIOPHAGE; CONTROLLED STUDY; CONVERGENT EVOLUTION; FITNESS; GENE MUTATION; GENE SEQUENCE; GENETIC VARIABILITY; GENOMIC ISLAND; GROWTH RATE; INVESTIGATIVE PROCEDURES; NONHUMAN; PHENOTYPE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROCHLOROCOCCUS; REVERTANT; WILD TYPE; BACTERIAL GENE; GENETICS; MOLECULAR EVOLUTION; MUTATION; VIROLOGY;

EID: 84928652547     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1420347112     Document Type: Article
Times cited : (47)

References (81)
  • 1
    • 11144354360 scopus 로고    scopus 로고
    • Environmental genome shotgun sequencing of the Sargasso Sea
    • Venter JC, et al. (2004) Environmental genome shotgun sequencing of the Sargasso Sea. Science 304(5667):66-74.
    • (2004) Science , vol.304 , Issue.5667 , pp. 66-74
    • Venter, J.C.1
  • 2
    • 33747073504 scopus 로고    scopus 로고
    • Microbial diversity in the deep sea and the underexplored "rare biosphere."
    • Sogin ML, et al. (2006) Microbial diversity in the deep sea and the underexplored "rare biosphere." Proc Natl Acad Sci USA 103(32):12115-12120.
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.32 , pp. 12115-12120
    • Sogin, M.L.1
  • 3
    • 66149150877 scopus 로고    scopus 로고
    • Microbial community structure and its functional implications
    • Fuhrman JA (2009) Microbial community structure and its functional implications. Nature 459(7244):193-199.
    • (2009) Nature , vol.459 , Issue.7244 , pp. 193-199
    • Fuhrman, J.A.1
  • 4
    • 84899559579 scopus 로고    scopus 로고
    • Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus
    • Kashtan N, et al. (2014) Single-cell genomics reveals hundreds of coexisting subpopulations in wild Prochlorococcus. Science 344(6182):416-420.
    • (2014) Science , vol.344 , Issue.6182 , pp. 416-420
    • Kashtan, N.1
  • 5
    • 33748353399 scopus 로고    scopus 로고
    • Annually reoccurring bacterial communities are predictable from ocean conditions
    • Fuhrman JA, et al. (2006) Annually reoccurring bacterial communities are predictable from ocean conditions. Proc Natl Acad Sci USA 103(35):13104-13109.
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.35 , pp. 13104-13109
    • Fuhrman, J.A.1
  • 6
    • 38149140067 scopus 로고    scopus 로고
    • Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes
    • Zwirglmaier K, et al. (2008) Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes. Environ Microbiol 10(1):147-161.
    • (2008) Environ Microbiol , vol.10 , Issue.1 , pp. 147-161
    • Zwirglmaier, K.1
  • 7
    • 77957000882 scopus 로고    scopus 로고
    • Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans
    • Malmstrom RR, et al. (2010) Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans. ISME J 4(10):1252-1264.
    • (2010) ISME J , vol.4 , Issue.10 , pp. 1252-1264
    • Malmstrom, R.R.1
  • 8
    • 0024475207 scopus 로고
    • High abundance of viruses found in aquatic environments
    • Bergh O, Børsheim KY, Bratbak G, Heldal M (1989) High abundance of viruses found in aquatic environments. Nature 340(6233):467-468.
    • (1989) Nature , vol.340 , Issue.6233 , pp. 467-468
    • Bergh, O.1    Børsheim, K.Y.2    Bratbak, G.3    Heldal, M.4
  • 9
    • 0025198355 scopus 로고
    • Viral mortality of marine bacteria and cyanobacteria
    • Proctor LM, Fuhrman JA (1990) Viral mortality of marine bacteria and cyanobacteria. Nature 343(6253):60-62.
    • (1990) Nature , vol.343 , Issue.6253 , pp. 60-62
    • Proctor, L.M.1    Fuhrman, J.A.2
  • 10
    • 34548792911 scopus 로고    scopus 로고
    • Marine viruses - Major players in the global ecosystem
    • Suttle CA (2007) Marine viruses - major players in the global ecosystem. Nat Rev Microbiol 5(10):801-812.
    • (2007) Nat Rev Microbiol , vol.5 , Issue.10 , pp. 801-812
    • Suttle, C.A.1
  • 11
    • 83655191021 scopus 로고    scopus 로고
    • Marine viruses: Truth or dare
    • Breitbart M (2012) Marine viruses: Truth or dare. Annu Rev Mar Sci 4(1):425-448.
    • (2012) Annu Rev Mar Sci , vol.4 , Issue.1 , pp. 425-448
    • Breitbart, M.1
  • 12
    • 0027329223 scopus 로고
    • Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater
    • Waterbury JB, Valois FW (1993) Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater. Appl Environ Microbiol 59(10):3393-3399.
    • (1993) Appl Environ Microbiol , vol.59 , Issue.10 , pp. 3393-3399
    • Waterbury, J.B.1    Valois, F.W.2
  • 13
    • 68249096294 scopus 로고    scopus 로고
    • Bacteriophages drive strain diversification in a marine Flavobacterium: Implications for phage resistance and physiological properties
    • Middelboe M, Holmfeldt K, Riemann L, Nybroe O, Haaber J (2009) Bacteriophages drive strain diversification in a marine Flavobacterium: Implications for phage resistance and physiological properties. Environ Microbiol 11(8):1971-1982.
    • (2009) Environ Microbiol , vol.11 , Issue.8 , pp. 1971-1982
    • Middelboe, M.1    Holmfeldt, K.2    Riemann, L.3    Nybroe, O.4    Haaber, J.5
  • 14
    • 79959842126 scopus 로고    scopus 로고
    • Genomic island variability facilitates Prochlorococcus-virus coexistence
    • Avrani S, Wurtzel O, Sharon I, Sorek R, Lindell D (2011) Genomic island variability facilitates Prochlorococcus-virus coexistence. Nature 474(7353):604-608.
    • (2011) Nature , vol.474 , Issue.7353 , pp. 604-608
    • Avrani, S.1    Wurtzel, O.2    Sharon, I.3    Sorek, R.4    Lindell, D.5
  • 15
    • 84858690397 scopus 로고    scopus 로고
    • Rapid diversification of coevolving marine Synechococcus and a virus
    • Marston MF, et al. (2012) Rapid diversification of coevolving marine Synechococcus and a virus. Proc Natl Acad Sci USA 109(12):4544-4549.
    • (2012) Proc Natl Acad Sci USA , vol.109 , Issue.12 , pp. 4544-4549
    • Marston, M.F.1
  • 18
    • 0037398083 scopus 로고    scopus 로고
    • Mechanisms of coexistence of a bacteria and a bacteriophage in a spatially homogeneous environment
    • Lythgoe KA, Chao L (2003) Mechanisms of coexistence of a bacteria and a bacteriophage in a spatially homogeneous environment. Ecol Lett 6(4):326-334.
    • (2003) Ecol Lett , vol.6 , Issue.4 , pp. 326-334
    • Lythgoe, K.A.1    Chao, L.2
  • 19
    • 33645024674 scopus 로고    scopus 로고
    • Spatial heterogeneity and the stability of host-parasite coexistence
    • Brockhurst MA, Buckling A, Rainey PB (2006) Spatial heterogeneity and the stability of host-parasite coexistence. J Evol Biol 19(2):374-379.
    • (2006) J Evol Biol , vol.19 , Issue.2 , pp. 374-379
    • Brockhurst, M.A.1    Buckling, A.2    Rainey, P.B.3
  • 20
    • 84878141242 scopus 로고    scopus 로고
    • Mechanisms of multi-strain coexistence in hostphage systems with nested infection networks
    • 0
    • Jover LF, Cortez MH, Weitz JS (2013) Mechanisms of multi-strain coexistence in hostphage systems with nested infection networks. J Theor Biol 332(0):65-77.
    • (2013) J Theor Biol , vol.332 , pp. 65-77
    • Jover, L.F.1    Cortez, M.H.2    Weitz, J.S.3
  • 22
    • 78650045540 scopus 로고    scopus 로고
    • The phage-host arms race: Shaping the evolution of microbes
    • Stern A, Sorek R (2011) The phage-host arms race: Shaping the evolution of microbes. BioEssays 33(1):43-51.
    • (2011) BioEssays , vol.33 , Issue.1 , pp. 43-51
    • Stern, A.1    Sorek, R.2
  • 24
    • 0001333091 scopus 로고
    • A complex community in a simple habitat: An experimental study with bacteria and phage
    • Chao L, Levin BR, Stewart FM (1977) A complex community in a simple habitat: An experimental study with bacteria and phage. Ecology 58(2):369-378.
    • (1977) Ecology , vol.58 , Issue.2 , pp. 369-378
    • Chao, L.1    Levin, B.R.2    Stewart, F.M.3
  • 25
    • 0033878587 scopus 로고    scopus 로고
    • Linking genetic change to community evolution: Insights from studies of bacteria and bacteriophage
    • Bohannan BJM, Lenski RE (2000) Linking genetic change to community evolution: Insights from studies of bacteria and bacteriophage. Ecol Lett 3(4):362-377.
    • (2000) Ecol Lett , vol.3 , Issue.4 , pp. 362-377
    • Bohannan, B.J.M.1    Lenski, R.E.2
  • 26
    • 0033784827 scopus 로고    scopus 로고
    • Bacterial growth rate and marine virus-host dynamics
    • Middelboe M (2000) Bacterial growth rate and marine virus-host dynamics. Microb Ecol 40(2):114-124.
    • (2000) Microb Ecol , vol.40 , Issue.2 , pp. 114-124
    • Middelboe, M.1
  • 27
    • 34547781107 scopus 로고    scopus 로고
    • Is there a cost of virus resistance in marine cyanobacteria?
    • Lennon JT, Khatana SAM, Marston MF, Martiny JBH (2007) Is there a cost of virus resistance in marine cyanobacteria? ISME J 1(4):300-312.
    • (2007) ISME J , vol.1 , Issue.4 , pp. 300-312
    • Lennon, J.T.1    Khatana, S.A.M.2    Marston, M.F.3    Martiny, J.B.H.4
  • 28
    • 84898538844 scopus 로고    scopus 로고
    • Diversity and geographical distribution of Flavobacterium psychrophilum isolates and their phages: Patterns of susceptibility to phage infection and phage host range
    • Castillo D, Christiansen RH, Espejo R, Middelboe M (2014) Diversity and geographical distribution of Flavobacterium psychrophilum isolates and their phages: Patterns of susceptibility to phage infection and phage host range. Microb Ecol 67(4):748-757.
    • (2014) Microb Ecol , vol.67 , Issue.4 , pp. 748-757
    • Castillo, D.1    Christiansen, R.H.2    Espejo, R.3    Middelboe, M.4
  • 29
    • 0036899166 scopus 로고    scopus 로고
    • Biological and biomedical implications of the co-evolution of pathogens and their hosts
    • Woolhouse MEJ, Webster JP, Domingo E, Charlesworth B, Levin BR (2002) Biological and biomedical implications of the co-evolution of pathogens and their hosts. Nat Genet 32(4):569-577.
    • (2002) Nat Genet , vol.32 , Issue.4 , pp. 569-577
    • Woolhouse, M.E.J.1    Webster, J.P.2    Domingo, E.3    Charlesworth, B.4    Levin, B.R.5
  • 30
    • 84875092761 scopus 로고    scopus 로고
    • Virus-host swinging party in the oceans: Incorporating biological complexity into paradigms of antagonistic coexistence
    • Avrani S, Schwartz DA, Lindell D (2012) Virus-host swinging party in the oceans: Incorporating biological complexity into paradigms of antagonistic coexistence. Mob Genet Elements 2(2):88-95.
    • (2012) Mob Genet Elements , vol.2 , Issue.2 , pp. 88-95
    • Avrani, S.1    Schwartz, D.A.2    Lindell, D.3
  • 32
    • 84927693101 scopus 로고    scopus 로고
    • Bacteria-phage coevolution as a driver of ecological and evolutionary processes in microbial communities
    • Koskella B, Brockhurst MA (2014) Bacteria-phage coevolution as a driver of ecological and evolutionary processes in microbial communities. FEMS Microbiol Rev 38(5):916-931.
    • (2014) FEMS Microbiol Rev , vol.38 , Issue.5 , pp. 916-931
    • Koskella, B.1    Brockhurst, M.A.2
  • 33
    • 84931749101 scopus 로고    scopus 로고
    • Host-parasite coevolutionary arms races give way to fluctuating selection
    • Hall AR, Scanlan PD, Morgan AD, Buckling A (2011) Host-parasite coevolutionary arms races give way to fluctuating selection. Ecol Lett 14(7):635-642.
    • (2011) Ecol Lett , vol.14 , Issue.7 , pp. 635-642
    • Hall, A.R.1    Scanlan, P.D.2    Morgan, A.D.3    Buckling, A.4
  • 34
    • 84859423134 scopus 로고    scopus 로고
    • Rapid genetic change underpins antagonistic coevolution in a natural host-pathogen metapopulation
    • Thrall PH, et al. (2012) Rapid genetic change underpins antagonistic coevolution in a natural host-pathogen metapopulation. Ecol Lett 15(5):425-435.
    • (2012) Ecol Lett , vol.15 , Issue.5 , pp. 425-435
    • Thrall, P.H.1
  • 35
    • 0033826796 scopus 로고    scopus 로고
    • Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic systems
    • Thingstad TF (2000) Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic systems. Limnol Oceanogr 45(6):1320-1328.
    • (2000) Limnol Oceanogr , vol.45 , Issue.6 , pp. 1320-1328
    • Thingstad, T.F.1
  • 36
    • 84872451505 scopus 로고    scopus 로고
    • Phage-induced diversification improves host evolvability
    • Williams HT (2013) Phage-induced diversification improves host evolvability. BMC Evol Biol 13(1):17.
    • (2013) BMC Evol Biol , vol.13 , Issue.1 , pp. 17
    • Williams, H.T.1
  • 37
    • 22144446352 scopus 로고    scopus 로고
    • Coevolutionary arms races between bacteria and bacteriophage
    • Weitz JS, Hartman H, Levin SA (2005) Coevolutionary arms races between bacteria and bacteriophage. Proc Natl Acad Sci USA 102(27):9535-9540.
    • (2005) Proc Natl Acad Sci USA , vol.102 , Issue.27 , pp. 9535-9540
    • Weitz, J.S.1    Hartman, H.2    Levin, S.A.3
  • 38
    • 34249740244 scopus 로고    scopus 로고
    • Experimental coevolution with bacteria and phage. The Pseudomonas fluorescens - Φ2 model system
    • Brockhurst MA, Morgan AD, Fenton A, Buckling A (2007) Experimental coevolution with bacteria and phage. The Pseudomonas fluorescens - Φ2 model system. Infect Genet Evol 7(4):547-552.
    • (2007) Infect Genet Evol , vol.7 , Issue.4 , pp. 547-552
    • Brockhurst, M.A.1    Morgan, A.D.2    Fenton, A.3    Buckling, A.4
  • 39
    • 77949423965 scopus 로고    scopus 로고
    • Antagonistic coevolution accelerates molecular evolution
    • Paterson S, et al. (2010) Antagonistic coevolution accelerates molecular evolution. Nature 464(7286):275-278.
    • (2010) Nature , vol.464 , Issue.7286 , pp. 275-278
    • Paterson, S.1
  • 40
    • 70350180460 scopus 로고    scopus 로고
    • Explaining microbial population genomics through phage predation
    • Rodriguez-Valera F, et al. (2009) Explaining microbial population genomics through phage predation. Nat Rev Microbiol 7(11):828-836.
    • (2009) Nat Rev Microbiol , vol.7 , Issue.11 , pp. 828-836
    • Rodriguez-Valera, F.1
  • 41
    • 84896398453 scopus 로고    scopus 로고
    • Explaining microbial genomic diversity in light of evolutionary ecology
    • Cordero OX, Polz MF (2014) Explaining microbial genomic diversity in light of evolutionary ecology. Nat Rev Microbiol 12(4):263-273.
    • (2014) Nat Rev Microbiol , vol.12 , Issue.4 , pp. 263-273
    • Cordero, O.X.1    Polz, M.F.2
  • 42
    • 0033009854 scopus 로고    scopus 로고
    • Prochlorococcus, a marine photosynthetic prokaryote of global significance
    • Partensky F, Hess WR, Vaulot D (1999) Prochlorococcus, a marine photosynthetic prokaryote of global significance. Microbiol Mol Biol Rev 63(1):106-127.
    • (1999) Microbiol Mol Biol Rev , vol.63 , Issue.1 , pp. 106-127
    • Partensky, F.1    Hess, W.R.2    Vaulot, D.3
  • 43
    • 84879060146 scopus 로고    scopus 로고
    • Present and future global distributions of the marine Cyanobacteria Prochlorococcus and Synechococcus
    • Flombaum P, et al. (2013) Present and future global distributions of the marine Cyanobacteria Prochlorococcus and Synechococcus. Proc Natl Acad Sci USA 110(24): 9824-9829.
    • (2013) Proc Natl Acad Sci USA , vol.110 , Issue.24 , pp. 9824-9829
    • Flombaum, P.1
  • 44
    • 66749151555 scopus 로고    scopus 로고
    • Ecological genomics of marine picocyanobacteria
    • Scanlan DJ, et al. (2009) Ecological genomics of marine picocyanobacteria. Microbiol Mol Biol Rev 73(2):249-299.
    • (2009) Microbiol Mol Biol Rev , vol.73 , Issue.2 , pp. 249-299
    • Scanlan, D.J.1
  • 45
    • 84926417391 scopus 로고    scopus 로고
    • The Genus Prochlorococcus, Phylum Cyanobacteria
    • eds Rosenberg E, DeLong EF, Lory S, Stackebrandt E, Thompson F (Springer, Berlin)
    • Lindell D (2014) The genus Prochlorococcus, phylum Cyanobacteria. The Prokaryotes - Other Major Lineages of Bacteria and the Archaea, eds Rosenberg E, DeLong EF, Lory S, Stackebrandt E, Thompson F (Springer, Berlin), pp 829-845.
    • (2014) The Prokaryotes - Other Major Lineages of Bacteria and the Archaea , pp. 829-845
    • Lindell, D.1
  • 46
    • 84927050723 scopus 로고    scopus 로고
    • Prochlorococcus: The structure and function of collective diversity
    • Biller SJ, Berube PM, Lindell D, Chisholm SW (2015) Prochlorococcus : The structure and function of collective diversity. Nat Rev Microbiol 13(1):13-27.
    • (2015) Nat Rev Microbiol , vol.13 , Issue.1 , pp. 13-27
    • Biller, S.J.1    Berube, P.M.2    Lindell, D.3    Chisholm, S.W.4
  • 47
    • 0027802137 scopus 로고
    • Marine cyanophages infecting oceanic and coastal strains of Synechococcus: Abundance, morphology, cross-infectivity and growth characteristics
    • Suttle CA, Chan AM (1993) Marine cyanophages infecting oceanic and coastal strains of Synechococcus: Abundance, morphology, cross-infectivity and growth characteristics. Mar Ecol Prog Ser 92(1-2):99-109.
    • (1993) Mar Ecol Prog Ser , vol.92 , Issue.1-2 , pp. 99-109
    • Suttle, C.A.1    Chan, A.M.2
  • 48
    • 0041375471 scopus 로고    scopus 로고
    • Cyanophages infecting the oceanic cyanobacterium Prochlorococcus
    • Sullivan MB, Waterbury JB, Chisholm SW (2003) Cyanophages infecting the oceanic cyanobacterium Prochlorococcus. Nature 424(6952):1047-1051.
    • (2003) Nature , vol.424 , Issue.6952 , pp. 1047-1051
    • Sullivan, M.B.1    Waterbury, J.B.2    Chisholm, S.W.3
  • 49
    • 84926419476 scopus 로고    scopus 로고
    • Host-dependent differences in abundance, composition and host range of cyanophages from the Red Sea
    • Dekel-Bird NP, Sabehi G, Mosevitzky B, Lindell D (2015) Host-dependent differences in abundance, composition and host range of cyanophages from the Red Sea. Environ Microbiol 17(4):1286-1299.
    • (2015) Environ Microbiol , vol.17 , Issue.4 , pp. 1286-1299
    • Dekel-Bird, N.P.1    Sabehi, G.2    Mosevitzky, B.3    Lindell, D.4
  • 50
    • 0028975082 scopus 로고
    • Growth of Prochlorococcus, a photosynthetic prokaryote, in the equatorial pacific ocean
    • Vaulot D, Marie D, Olson RJ, Chisholm SW (1995) Growth of Prochlorococcus, a photosynthetic prokaryote, in the equatorial pacific ocean. Science 268(5216):1480-1482.
    • (1995) Science , vol.268 , Issue.5216 , pp. 1480-1482
    • Vaulot, D.1    Marie, D.2    Olson, R.J.3    Chisholm, S.W.4
  • 51
    • 0002326959 scopus 로고    scopus 로고
    • Prochlorococcus growth rate and contribution to primary production in the equatorial and subtropical North Pacific Ocean
    • Liu HB, Nolla HA, Campbell L (1997) Prochlorococcus growth rate and contribution to primary production in the equatorial and subtropical North Pacific Ocean. Aquat Microb Ecol 12(1):39-47.
    • (1997) Aquat Microb Ecol , vol.12 , Issue.1 , pp. 39-47
    • Liu, H.B.1    Nolla, H.A.2    Campbell, L.3
  • 53
    • 0032169654 scopus 로고    scopus 로고
    • The great escape: Structure and function of the autotransporter proteins
    • Henderson IR, Navarro-Garcia F, Nataro JP (1998) The great escape: Structure and function of the autotransporter proteins. Trends Microbiol 6(9):370-378.
    • (1998) Trends Microbiol , vol.6 , Issue.9 , pp. 370-378
    • Henderson, I.R.1    Navarro-Garcia, F.2    Nataro, J.P.3
  • 54
    • 0035111746 scopus 로고    scopus 로고
    • Virulence functions of autotransporter proteins
    • Henderson IR, Nataro JP (2001) Virulence functions of autotransporter proteins. Infect Immun 69(3):1231-1243.
    • (2001) Infect Immun , vol.69 , Issue.3 , pp. 1231-1243
    • Henderson, I.R.1    Nataro, J.P.2
  • 56
    • 0015453608 scopus 로고
    • Mutator gene studies in Escherichia coli: The mutS gene
    • Cox EC, Degnen GE, Scheppe ML (1972) Mutator gene studies in Escherichia coli: The mutS gene. Genetics 72(4):551-567.
    • (1972) Genetics , vol.72 , Issue.4 , pp. 551-567
    • Cox, E.C.1    Degnen, G.E.2    Scheppe, M.L.3
  • 57
    • 0036274037 scopus 로고    scopus 로고
    • The mismatch repair system (mutS, mutL and uvrD genes) in Pseudomonas aeruginosa: Molecular characterization of naturally occurring mutants
    • Oliver A, Baquero F, Blázquez J (2002) The mismatch repair system (mutS, mutL and uvrD genes) in Pseudomonas aeruginosa: Molecular characterization of naturally occurring mutants. Mol Microbiol 43(6):1641-1650.
    • (2002) Mol Microbiol , vol.43 , Issue.6 , pp. 1641-1650
    • Oliver, A.1    Baquero, F.2    Blázquez, J.3
  • 58
    • 37249025333 scopus 로고    scopus 로고
    • Coevolution with viruses drives the evolution of bacterial mutation rates
    • Pal C, Maciá MD, Oliver A, Schachar I, Buckling A (2007) Coevolution with viruses drives the evolution of bacterial mutation rates. Nature 450(7172):1079-1081.
    • (2007) Nature , vol.450 , Issue.7172 , pp. 1079-1081
    • Pal, C.1    Maciá, M.D.2    Oliver, A.3    Schachar, I.4    Buckling, A.5
  • 59
    • 84863393863 scopus 로고    scopus 로고
    • Repeatability and contingency in the evolution of a key innovation in phage lambda
    • Meyer JR, et al. (2012) Repeatability and contingency in the evolution of a key innovation in phage lambda. Science 335(6067):428-432.
    • (2012) Science , vol.335 , Issue.6067 , pp. 428-432
    • Meyer, J.R.1
  • 60
    • 33645232361 scopus 로고    scopus 로고
    • Genomic islands and the ecology and evolution of Prochlorococcus
    • Coleman ML, et al. (2006) Genomic islands and the ecology and evolution of Prochlorococcus. Science 311(5768):1768-1770.
    • (2006) Science , vol.311 , Issue.5768 , pp. 1768-1770
    • Coleman, M.L.1
  • 61
    • 34548513271 scopus 로고    scopus 로고
    • Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution
    • Lindell D, et al. (2007) Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution. Nature 449(7158):83-86.
    • (2007) Nature , vol.449 , Issue.7158 , pp. 83-86
    • Lindell, D.1
  • 62
    • 84878320253 scopus 로고    scopus 로고
    • Genomic island genes in a coastal marine Synechococcus strain confer enhanced tolerance to copper and oxidative stress
    • Stuart RK, Brahamsha B, Busby K, Palenik B (2013) Genomic island genes in a coastal marine Synechococcus strain confer enhanced tolerance to copper and oxidative stress. ISME J 7(6):1139-1149.
    • (2013) ISME J , vol.7 , Issue.6 , pp. 1139-1149
    • Stuart, R.K.1    Brahamsha, B.2    Busby, K.3    Palenik, B.4
  • 63
    • 0001498391 scopus 로고
    • Experimental studies of pleiotropy and epistasis in Escherichia coli. II. Compensation for maldaptive effects associated with resistance to virus T4
    • Lenski RE (1988) Experimental studies of pleiotropy and epistasis in Escherichia coli. II. Compensation for maldaptive effects associated with resistance to virus T4. Evolution 42(3):433-440.
    • (1988) Evolution , vol.42 , Issue.3 , pp. 433-440
    • Lenski, R.E.1
  • 64
    • 80052318159 scopus 로고    scopus 로고
    • Ongoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli
    • Kashiwagi A, Yomo T (2011) Ongoing phenotypic and genomic changes in experimental coevolution of RNA bacteriophage Qβ and Escherichia coli. PLoS Genet 7(8):e1002188.
    • (2011) PLoS Genet , vol.7 , Issue.8 , pp. e1002188
    • Kashiwagi, A.1    Yomo, T.2
  • 65
    • 78649307701 scopus 로고    scopus 로고
    • Parallel changes in host resistance to viral infection during 45,000 generations of relaxed selection
    • Meyer JR, et al. (2010) Parallel changes in host resistance to viral infection during 45,000 generations of relaxed selection. Evolution 64(10):3024-3034.
    • (2010) Evolution , vol.64 , Issue.10 , pp. 3024-3034
    • Meyer, J.R.1
  • 66
    • 49249112719 scopus 로고    scopus 로고
    • The shape of an ecological trade-off varies with environment
    • Jessup CM, Bohannan BJM (2008) The shape of an ecological trade-off varies with environment. Ecol Lett 11(9):947-959.
    • (2008) Ecol Lett , vol.11 , Issue.9 , pp. 947-959
    • Jessup, C.M.1    Bohannan, B.J.M.2
  • 67
    • 33745615117 scopus 로고    scopus 로고
    • The competitive cost of antibiotic resistance in Mycobacterium tuberculosis
    • Gagneux S, et al. (2006) The competitive cost of antibiotic resistance in Mycobacterium tuberculosis. Science 312(5782):1944-1946.
    • (2006) Science , vol.312 , Issue.5782 , pp. 1944-1946
    • Gagneux, S.1
  • 68
    • 84889590334 scopus 로고    scopus 로고
    • Bacterial evolution of antibiotic hypersensitivity
    • Lázár V, et al. (2013) Bacterial evolution of antibiotic hypersensitivity. Mol Syst Biol 9(1):700.
    • (2013) Mol Syst Biol , vol.9 , Issue.1 , pp. 700
    • Lázár, V.1
  • 69
    • 84874100936 scopus 로고    scopus 로고
    • Evolution of Escherichia coli rifampicin resistance in an antibiotic-free environment during thermal stress
    • Rodríguez-Verdugo A, Gaut BS, Tenaillon O (2013) Evolution of Escherichia coli rifampicin resistance in an antibiotic-free environment during thermal stress. BMC Evol Biol 13(1):50.
    • (2013) BMC Evol Biol , vol.13 , Issue.1 , pp. 50
    • Rodríguez-Verdugo, A.1    Gaut, B.S.2    Tenaillon, O.3
  • 70
    • 77949569493 scopus 로고    scopus 로고
    • Antibiotic resistance and its cost: Is it possible to reverse resistance?
    • Andersson DI, Hughes D (2010) Antibiotic resistance and its cost: Is it possible to reverse resistance? Nat Rev Microbiol 8(4):260-271.
    • (2010) Nat Rev Microbiol , vol.8 , Issue.4 , pp. 260-271
    • Andersson, D.I.1    Hughes, D.2
  • 71
    • 84555209977 scopus 로고    scopus 로고
    • Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes
    • Comas I, et al. (2012) Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes. Nat Genet 44(1):106-110.
    • (2012) Nat Genet , vol.44 , Issue.1 , pp. 106-110
    • Comas, I.1
  • 72
    • 0027132575 scopus 로고
    • ABC transporters: Bacterial exporters
    • Fath MJ, Kolter R (1993) ABC transporters: Bacterial exporters. Microbiol Rev 57(4):995-1017.
    • (1993) Microbiol Rev , vol.57 , Issue.4 , pp. 995-1017
    • Fath, M.J.1    Kolter, R.2
  • 73
    • 84901660516 scopus 로고    scopus 로고
    • A theoretical analysis of how strain-specific viruses can control microbial species diversity
    • Thingstad TF, Våge S, Storesund JE, Sandaa R-A, Giske J (2014) A theoretical analysis of how strain-specific viruses can control microbial species diversity. Proc Natl Acad Sci USA 111(21):7813-7818.
    • (2014) Proc Natl Acad Sci USA , vol.111 , Issue.21 , pp. 7813-7818
    • Thingstad, T.F.1    Våge, S.2    Storesund, J.E.3    Sandaa, R.-A.4    Giske, J.5
  • 74
    • 84876502182 scopus 로고    scopus 로고
    • Diversity and evolutionary relationships of T7-like podoviruses infecting marine cyanobacteria
    • Dekel-Bird NP, et al. (2013) Diversity and evolutionary relationships of T7-like podoviruses infecting marine cyanobacteria. Environ Microbiol 15(5):1476-1491.
    • (2013) Environ Microbiol , vol.15 , Issue.5 , pp. 1476-1491
    • Dekel-Bird, N.P.1
  • 75
    • 44649160016 scopus 로고    scopus 로고
    • Culturing the marine cyanobacterium Prochlorococcus
    • Moore LR, et al. (2007) Culturing the marine cyanobacterium Prochlorococcus. Limnol Oceanogr Methods 5(10):353-362.
    • (2007) Limnol Oceanogr Methods , vol.5 , Issue.10 , pp. 353-362
    • Moore, L.R.1
  • 76
    • 47749145412 scopus 로고    scopus 로고
    • Facilitation of robust growth of Prochlorococcus colonies and dilute liquid cultures by "helper" heterotrophic bacteria
    • Morris JJ, Kirkegaard R, Szul MJ, Johnson ZI, Zinser ER (2008) Facilitation of robust growth of Prochlorococcus colonies and dilute liquid cultures by "helper" heterotrophic bacteria. Appl Environ Microbiol 74(14):4530-4534.
    • (2008) Appl Environ Microbiol , vol.74 , Issue.14 , pp. 4530-4534
    • Morris, J.J.1    Kirkegaard, R.2    Szul, M.J.3    Johnson, Z.I.4    Zinser, E.R.5
  • 77
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25(14):1754-1760.
    • (2009) Bioinformatics , vol.25 , Issue.14 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 78
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • Li H, et al.; 1000 Genome Project Data Processing Subgroup (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics 25(16):2078-2079.
    • (2009) Bioinformatics , vol.25 , Issue.16 , pp. 2078-2079
    • Li, H.1
  • 79
    • 75549090603 scopus 로고    scopus 로고
    • The Pfam protein families database
    • Finn RD, et al. (2010) The Pfam protein families database. Nucleic Acids Res 38(Database issue):D211-D222.
    • (2010) Nucleic Acids Res , vol.38 , Issue.DATABASE ISSUE , pp. D211-D222
    • Finn, R.D.1
  • 80
    • 0033956060 scopus 로고    scopus 로고
    • The COG database: A tool for genome-scale analysis of protein functions and evolution
    • Tatusov RL, Galperin MY, Natale DA, Koonin EV (2000) The COG database: A tool for genome-scale analysis of protein functions and evolution. Nucleic Acids Res 28(1):33-36.
    • (2000) Nucleic Acids Res , vol.28 , Issue.1 , pp. 33-36
    • Tatusov, R.L.1    Galperin, M.Y.2    Natale, D.A.3    Koonin, E.V.4
  • 81
    • 84862202790 scopus 로고    scopus 로고
    • ProPortal: A resource for integrated systems biology of Prochlorococcus and its phage
    • D1
    • Kelly L, Huang KH, Ding H, Chisholm SW (2012) ProPortal: A resource for integrated systems biology of Prochlorococcus and its phage. Nucleic Acids Res 40(Database issue, D1):D632-D640.
    • (2012) Nucleic Acids Res , vol.40 , Issue.DATABASE ISSUE , pp. D632-D640
    • Kelly, L.1    Huang, K.H.2    Ding, H.3    Chisholm, S.W.4


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