메뉴 건너뛰기




Volumn 474, Issue 7353, 2011, Pages 604-608

Genomic island variability facilitates Prochlorococcusvirus coexistence

Author keywords

[No Author keywords available]

Indexed keywords

COEXISTENCE; CYANOBACTERIUM; FITNESS; GENETIC ANALYSIS; GENOME; GROWTH RATE; HOST-PATHOGEN INTERACTION; INFECTIVITY; MUTATION; POLYMERASE CHAIN REACTION; POLYMORPHISM; POPULATION SIZE; SELECTION; VIRUS;

EID: 79959842126     PISSN: 00280836     EISSN: 14764687     Source Type: Journal    
DOI: 10.1038/nature10172     Document Type: Article
Times cited : (231)

References (34)
  • 1
    • 0033009854 scopus 로고    scopus 로고
    • Prochlorococcus, a marine photosynthetic prokaryote of global significance
    • Partensky, F., Hess, W. R. & Vaulot, D. Prochlorococcus, a marine photosynthetic prokaryote of global significance. Microbiol. Mol. Biol. Rev. 63, 106-127 (1999). (Pubitemid 29116088)
    • (1999) Microbiology and Molecular Biology Reviews , vol.63 , Issue.1 , pp. 106-127
    • Partensky, F.1    Hess, W.R.2    Vaulot, D.3
  • 2
    • 77957000882 scopus 로고    scopus 로고
    • Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans
    • Malmstrom, R. R. et al. Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans. ISME J. 4, 1252-1264 (2010).
    • (2010) ISME J. , vol.4 , pp. 1252-1264
    • Malmstrom, R.R.1
  • 4
    • 0032482462 scopus 로고    scopus 로고
    • Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes
    • Moore, L. R., Rocap, G. & Chisholm, S. W. Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes. Nature 393, 464-467 (1998).
    • (1998) Nature , vol.393 , pp. 464-467
    • Moore, L.R.1    Rocap, G.2    Chisholm, S.W.3
  • 6
    • 33645216333 scopus 로고    scopus 로고
    • Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients
    • Johnson, Z. I. et al. Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients. Science 311, 1737-1740 (2006).
    • (2006) Science , vol.311 , pp. 1737-1740
    • Johnson, Z.I.1
  • 7
    • 0041375471 scopus 로고    scopus 로고
    • Cyanophages infecting the oceanic cyanobacterium Prochlorococcus
    • DOI 10.1038/nature01929
    • Sullivan, M. B., Waterbury, J. B. & Chisholm, S. W. Cyanophages infecting the oceanic cyanobacterium Prochlorococcus. Nature 424, 1047-1051 (2003). (Pubitemid 37064303)
    • (2003) Nature , vol.424 , Issue.6952 , pp. 1047-1051
    • Sullivan, M.B.1    Waterbury, J.B.2    Chisholm, S.W.3
  • 8
    • 25144506135 scopus 로고    scopus 로고
    • Viruses in the sea
    • DOI 10.1038/nature04160, PII N04160
    • Suttle, C. A. Viruses in the sea. Nature 437, 356-361 (2005). (Pubitemid 41613491)
    • (2005) Nature , vol.437 , Issue.7057 , pp. 356-361
    • Suttle, C.A.1
  • 9
    • 0033826796 scopus 로고    scopus 로고
    • Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic ecosystems
    • Thingstad, T. F. Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic ecosystems. Limnol. Oceanogr. 45, 1320-1328 (2000).
    • (2000) Limnol. Oceanogr. , vol.45 , pp. 1320-1328
    • Thingstad, T.F.1
  • 10
    • 0033878587 scopus 로고    scopus 로고
    • Linking genetic change to community evolution: Insights from studies of bacteria and bacteriophage
    • DOI 10.1046/j.1461-0248.2000.00161.x
    • Bohannan, B. J. M. & Lenski, R. E. Linking genetic change to community evolution: insights fromstudies of bacteria and bacteriophage. Ecol. Lett. 3, 362-377 (2000). (Pubitemid 30597803)
    • (2000) Ecology Letters , vol.3 , Issue.4 , pp. 362-377
    • Bohannan, B.J.M.1    Lenski, R.E.2
  • 11
    • 22544470014 scopus 로고    scopus 로고
    • War is peace - Dispatches from the bacterial and phage killing fields
    • DOI 10.1016/j.mib.2005.06.004, PII S1369527405000780, Host-Microbe Interactions: Fungi / Parasites
    • Comeau, A. M. & Krisch, H. M. War is peace - dispatches from the bacterial and phage killing fields. Curr. Opin. Microbiol. 8, 488-494 (2005). (Pubitemid 41021912)
    • (2005) Current Opinion in Microbiology , vol.8 , Issue.4 , pp. 488-494
    • Comeau, A.M.1    Krisch, H.M.2
  • 12
    • 78650045540 scopus 로고    scopus 로고
    • The phage-host armsrace: Shaping the evolution of microbes
    • Stern, A. & Sorek, R. The phage-host armsrace: shaping the evolution of microbes. Bioessays 33, 43-51 (2011).
    • (2011) Bioessays , vol.33 , pp. 43-51
    • Stern, A.1    Sorek, R.2
  • 13
    • 0027329223 scopus 로고
    • Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater
    • Waterbury, J. B. & Valois, F. W. Resistance to co-occurring phages enables marine Synechococcus communities to coexist with cyanophages abundant in seawater. Appl. Environ. Microbiol. 59, 3393-3399 (1993). (Pubitemid 23296459)
    • (1993) Applied and Environmental Microbiology , vol.59 , Issue.10 , pp. 3393-3399
    • Waterbury, J.B.1    Valois, F.W.2
  • 14
    • 10944248427 scopus 로고    scopus 로고
    • Computing prokaryotic gene ubiquity: Rescuing the core from extinction
    • DOI 10.1101/gr.3024704
    • Charlebois, R. L. & Doolittle, W. F. Computing prokaryotic gene ubiquity: rescuing the core from extinction. Genome Res. 14, 2469-2477 (2004). (Pubitemid 40012230)
    • (2004) Genome Research , vol.14 , Issue.12 , pp. 2469-2477
    • Charlebois, R.L.1    Doolittle, W.F.2
  • 15
    • 2442449227 scopus 로고    scopus 로고
    • Genomicislands in pathogenic and environmental microorganisms
    • Dobrindt, U. ,Hochhut, B. ,Hentschel, U. & Hacker, J. Genomicislands in pathogenic and environmental microorganisms. Nature Rev. Microbiol. 2, 414-424 (2004).
    • (2004) Nature Rev. Microbiol. , vol.2 , pp. 414-424
    • Hochhut, D.U.1    Hentschel, U.B.2    Hacker, J.3
  • 16
    • 55449094978 scopus 로고    scopus 로고
    • Evidence of a large novel gene pool associated with prokaryotic genomic islands
    • Hsiao, W. W. et al. Evidence of a large novel gene pool associated with prokaryotic genomic islands. PLoS Genet. 1, e62 (2005).
    • (2005) PLoS Genet. , vol.1
    • Hsiao, W.W.1
  • 17
    • 77951115860 scopus 로고    scopus 로고
    • Detecting genomic islands using bioinformatics approaches
    • Langille, M. G., Hsiao, W. W. & Brinkman, F. S. Detecting genomic islands using bioinformatics approaches. Nature Rev. Microbiol. 8, 373-382 (2010).
    • (2010) Nature Rev. Microbiol. , vol.8 , pp. 373-382
    • Langille, M.G.1    Hsiao, W.W.2    Brinkman, F.S.3
  • 18
    • 37749041470 scopus 로고    scopus 로고
    • Patterns and implications of gene gain and loss in the evolutionof Prochlorococcus
    • Kettler, G. C. et al. Patterns and implications of gene gain and loss in the evolutionof Prochlorococcus. PLoS Genet. 3, e231 (2007).
    • (2007) PLoS Genet. , vol.3
    • Kettler, G.C.1
  • 19
    • 33645232361 scopus 로고    scopus 로고
    • Genomic islands and the ecology and evolution of Prochlorococcus
    • Coleman, M. L. et al. Genomic islands and the ecology and evolution of Prochlorococcus. Science 311, 1768-1770 (2006).
    • (2006) Science , vol.311 , pp. 1768-1770
    • Coleman, M.L.1
  • 20
    • 47149092637 scopus 로고    scopus 로고
    • Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria
    • Dufresne, A. et al. Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria. Genome Biol. 9, R90 (2008).
    • (2008) Genome Biol. , vol.9
    • Dufresne, A.1
  • 21
    • 0041876235 scopus 로고    scopus 로고
    • The genome of a motile marine Synechococcus
    • Palenik, B. et al. The genome of a motile marine Synechococcus. Nature 424, 1037-1042 (2003).
    • (2003) Nature , vol.424 , pp. 1037-1042
    • Palenik, B.1
  • 22
    • 70350180460 scopus 로고    scopus 로고
    • Explaining microbial population genomics through phage predation
    • Rodriguez-Valera, F. et al. Explaining microbial population genomics through phage predation. Nature Rev. Microbiol. 7, 828-836 (2009).
    • (2009) Nature Rev. Microbiol. , vol.7 , pp. 828-836
    • Rodriguez-Valera, F.1
  • 23
    • 78249280297 scopus 로고    scopus 로고
    • Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments
    • Sullivan, M. B. et al. Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments. Environ. Microbiol. 12, 3035-3056 (2010).
    • (2010) Environ. Microbiol. , vol.12 , pp. 3035-3056
    • Sullivan, M.B.1
  • 25
    • 34548487267 scopus 로고    scopus 로고
    • Selection and characterization of cyanophage resistance in marine Synechococcus strains
    • DOI 10.1128/AEM.00356-07
    • Stoddard, L. I., Martiny, J. B. H. & Marston, M. F. Selection and characterization of cyanophage resistance in marine Synechococcus strains. Appl. Environ. Microbiol. 73, 5516-5522 (2007). (Pubitemid 47378756)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.17 , pp. 5516-5522
    • Stoddard, L.I.1    Martiny, J.B.H.2    Marston, M.F.3
  • 26
    • 0022216068 scopus 로고
    • Constraints on the coevolution of bacteria and virulent phage: A model, some experiments, and predictions for natural communities
    • DOI 10.1086/284364
    • Lenski, R. E. & Levin, B. R. Constraints on the coevolution of bacteria and virulent phage: a model, some experiments, and predictions for natural communities. Am. Nat. 125, 585-602 (1985). (Pubitemid 16277753)
    • (1985) American Naturalist , vol.125 , Issue.4 , pp. 585-602
    • Lenski, R.E.1    Levin, B.R.2
  • 27
    • 0001641514 scopus 로고
    • Mutations of bacteria from virus sensitivity to virus resistance
    • Luria, S. E. & Delbruck, M. Mutations of bacteria from virus sensitivity to virus resistance. Genetics 28, 491-511 (1943).
    • (1943) Genetics , vol.28 , pp. 491-511
    • Luria, S.E.1    Delbruck, M.2
  • 28
    • 0037398083 scopus 로고    scopus 로고
    • Mechanisms of coexistence of a bacteria and a bacteriophage in a spatially homogeneous environment
    • DOI 10.1046/j.1461-0248.2003.00433.x
    • Lythgoe, A. & Chao, L. Mechnisms of coexistence of a bacteria and a bacteriophage in a spatially homogeneous environment. Ecol. Lett. 6, 326-334 (2003). (Pubitemid 36521890)
    • (2003) Ecology Letters , vol.6 , Issue.4 , pp. 326-334
    • Lythgoe, K.A.1    Chao, L.2
  • 29
    • 0013972114 scopus 로고
    • Frequency of phage-resistant mutations and effect of the bacteriophage on the formation of resistant forms of Vibrio cholera
    • Somova, A. G. Frequency of phage-resistant mutations and effect of the bacteriophage on the formation of resistant forms of Vibrio cholera. Bull. Exp. Biol. Med. 31, 99-103 (1966).
    • (1966) Bull. Exp. Biol. Med. , vol.31 , pp. 99-103
    • Somova, A.G.1
  • 30
    • 33947238287 scopus 로고    scopus 로고
    • The Sorcerer II Global Ocean Sampling expedition: Northwest Atlantic through eastern tropical Pacific
    • Rusch, D. B. et al. The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific. PLoS Biol. 5, e77 (2007).
    • (2007) PLoS Biol. , vol.5
    • Rusch, D.B.1
  • 31
    • 33947235074 scopus 로고    scopus 로고
    • TheSorcerer II Global Ocean Sampling expedition: Expanding the universe of protein families
    • Yooseph, S. et al. TheSorcerer II Global Ocean Sampling expedition: expanding the universe of protein families. PLoS Biol. 5, e16 (2007).
    • (2007) PLoS Biol. , vol.5
    • Yooseph, S.1
  • 32
    • 0037333188 scopus 로고    scopus 로고
    • Suppression-subtractive hybridisation reveals variations in gene distribution amongst the Burkholderia cepacia complex, including the presence in some strains of a genomic island containing putative polysaccharide production genes
    • Parsons, Y. N. et al. Suppression-subtractive hybridisation reveals variations in gene distribution amongst the Burkholderia cepacia complex, including the presence in some strains of a genomic island containing putative polysaccharide production genes. Arch. Microbiol. 179, 214-223 (2003). (Pubitemid 36286855)
    • (2003) Archives of Microbiology , vol.179 , Issue.3 , pp. 214-223
    • Parsons, Y.N.1    Banasko, R.2    Detsika, M.G.3    Duangsonk, K.4    Rainbow, L.5    Hart, C.A.6    Winstanley, C.7
  • 33
    • 69949100667 scopus 로고    scopus 로고
    • Contribution ofmobile genetic elements to Desulfovibrio vulgaris genome plasticity
    • Walker, C. B. et al. Contribution ofmobile genetic elements to Desulfovibrio vulgaris genome plasticity. Environ. Microbiol. 11, 2244-2252 (2009).
    • (2009) Environ. Microbiol. , vol.11 , pp. 2244-2252
    • Walker, C.B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.