-
1
-
-
33645415035
-
TRIM retrotransposons occur in apple and are polymorphic between varieties but not sports
-
Antonius-Klemola, K., R. Kalendar and A.H. Schulman (2006) TRIM retrotransposons occur in apple and are polymorphic between varieties but not sports. Theor. Appl. Genet. 112: 999-1008.
-
(2006)
Theor. Appl. Genet
, vol.112
, pp. 999-1008
-
-
Antonius-Klemola, K.1
Kalendar, R.2
Schulman, A.H.3
-
2
-
-
77956369865
-
Transposable elements in a marginal plant population: Temporal fluctuations provide new insights into genome evolution of wild diploid wheat
-
Belyayev, A., R. Kalendar, L. Brodsky, E. Nevo, A. Schulman and O. Raskina (2010) Transposable elements in a marginal plant population: temporal fluctuations provide new insights into genome evolution of wild diploid wheat. Mob. DNA 1: 1-6.
-
(2010)
Mob. DNA
, vol.1
, pp. 1-6
-
-
Belyayev, A.1
Kalendar, R.2
Brodsky, L.3
Nevo, E.4
Schulman, A.5
Raskina, O.6
-
3
-
-
41549135765
-
Development of a genetic linkage map and identification of homologous linkage groups in sweet potato using multiple-dose AFLP markers
-
Cervantes-Flores, JC., G.C. Yencho, A. Kriegner, K.V. Pecota, M.A. Faulk, R.O.M. Mwanga and B.R. Sosinski (2008) Development of a genetic linkage map and identification of homologous linkage groups in sweet potato using multiple-dose AFLP markers. Mol. Breed. 21: 511-532.
-
(2008)
Mol. Breed
, vol.21
, pp. 511-532
-
-
Cervantes-Flores, J.C.1
Yencho, G.C.2
Kriegner, A.3
Pecota, K.V.4
Faulk, M.A.5
Mwanga, R.6
Sosinski, B.R.7
-
4
-
-
0036250001
-
Plant transposable elements: Where genetics meets genomics
-
Feschotte, C., N. Jiang and S.R. Wessler (2002) Plant transposable elements: where genetics meets genomics. Nat. Rev. Genet. 3: 329-341.
-
(2002)
Nat. Rev. Genet
, vol.3
, pp. 329-341
-
-
Feschotte, C.1
Jiang, N.2
Wessler, S.R.3
-
5
-
-
0028136089
-
Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudotestcross: Mapping strategy and RAPD markers
-
Grattapaglia, D. and R. Sederoff (1994) Genetic linkage maps of Eucalyptus grandis and Eucalyptus urophylla using a pseudotestcross: mapping strategy and RAPD markers. Genetics 137: 1121-1137.
-
(1994)
Genetics
, vol.137
, pp. 1121-1137
-
-
Grattapaglia, D.1
Sederoff, R.2
-
6
-
-
0000938339
-
Cytological observations and fertility measurements of sweet potato [Ipomoea batatas (L.) Lam.]
-
Jones, A. (1965) Cytological observations and fertility measurements of sweet potato [Ipomoea batatas (L.) Lam.]. Proc. Am. Soc. Hort. Sci. 86: 527-537.
-
(1965)
Proc. Am. Soc. Hort. Sci
, vol.86
, pp. 527-537
-
-
Jones, A.1
-
7
-
-
0012955560
-
Theoretical segregation ratios of qualitatively inherited characters for hexaploid sweet potato (Ipomoea batatas L.)
-
U. S. Department of Agriculture in cooperation with Georgia Agricultural Experiment Stations
-
Jones, A. (1967) Theoretical segregation ratios of qualitatively inherited characters for hexaploid sweet potato (Ipomoea batatas L.). Technical Bulletin No. 1368. Agricultural Research Service, U. S. Department of Agriculture in cooperation with Georgia Agricultural Experiment Stations, pp. 1-6.
-
(1967)
Technical Bulletin No. 1368. Agricultural Research Service
, pp. 1-6
-
-
Jones, A.1
-
8
-
-
0032943978
-
IRAP and REMAP: Two new retrotransposon-based DNA fingerprinting techniques
-
Kalendar, R., T. Grob, M. Regina, A. Suoniemi and A. Schulman (1999) IRAP and REMAP: two new retrotransposon-based DNA fingerprinting techniques. Theor. Appl. Genet. 98: 704-711.
-
(1999)
Theor. Appl. Genet
, vol.98
, pp. 704-711
-
-
Kalendar, R.1
Grob, T.2
Regina, M.3
Suoniemi, A.4
Schulman, A.5
-
9
-
-
84874087807
-
The use of retrotransposon-based molecular markers to analyze genetic diversity
-
Kalendar, R. (2011) The use of retrotransposon-based molecular markers to analyze genetic diversity. Ratar. Povrt. 48: 261-274.
-
(2011)
Ratar. Povrt
, vol.48
, pp. 261-274
-
-
Kalendar, R.1
-
10
-
-
79953078781
-
Analysis of plant diversity with retrotransposonbased molecular markers
-
Kalendar, R., A.J. Flavell, T.H.N. Ellis, T. Sjakste, C. Moisy and A.H. Schulman (2011) Analysis of plant diversity with retrotransposonbased molecular markers. Heredity 106: 520-530.
-
(2011)
Heredity
, vol.106
, pp. 520-530
-
-
Kalendar, R.1
Flavell, A.J.2
Ellis, T.3
Sjakste, T.4
Moisy, C.5
Schulman, A.H.6
-
11
-
-
0036226603
-
BLAT—The BLAST-Like Alignment Tool
-
Kent, W.J. (2002) BLAT—The BLAST-Like Alignment Tool. Genome Res. 12: 656-664.
-
(2002)
Genome Res
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
12
-
-
77952770789
-
Molecular markers based on LTR retrotransposons BARE-1 and Jeli uncover different strata of evolutionary relationships in diploid wheats
-
Konovalov, F.A., N.P. Goncharov, S. Goryunova, A. Shaturova, T. Proshlyakova and A. Kudryavtsev (2010) Molecular markers based on LTR retrotransposons BARE-1 and Jeli uncover different strata of evolutionary relationships in diploid wheats. Mol. Genet. Genomics 283: 551-563.
-
(2010)
Mol. Genet. Genomics
, vol.283
, pp. 551-563
-
-
Konovalov, F.A.1
Goncharov, N.P.2
Goryunova, S.3
Shaturova, A.4
Proshlyakova, T.5
Kudryavtsev, A.6
-
13
-
-
0037386908
-
A genetic linkage map of sweet potato [Ipomoea batatas (L.) Lam.] based on AFLP markers
-
Kriegner, A., J.C. Cervantes, K. Burg, R.O.M. Mwanga and D. Zhang (2003) A genetic linkage map of sweet potato [Ipomoea batatas (L.) Lam.] based on AFLP markers. Mol. Breed. 11: 169-185.
-
(2003)
Mol. Breed
, vol.11
, pp. 169-185
-
-
Kriegner, A.1
Cervantes, J.C.2
Burg, K.3
Mwanga, R.4
Zhang, D.5
-
15
-
-
0035206133
-
Applications of retrotransposons as genetic tools in plant biology
-
Kumar, A. and H. Hirochika (2001) Applications of retrotransposons as genetic tools in plant biology. Trends Plant Sci. 6: 127-134.
-
(2001)
Trends Plant Sci
, vol.6
, pp. 127-134
-
-
Kumar, A.1
Hirochika, H.2
-
16
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin, M.A, G. Blackshields, N.P. Brown, R. Chenna, P.A. McGettigan, H. McWilliam, F. Valentin, I.M. Wallace, A. Wilm, R. Lopez et al. (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
-
17
-
-
80051997952
-
Dynamic interactions between transposable elements and their hosts
-
Levin, H.L. and J.V. Moran (2011) Dynamic interactions between transposable elements and their hosts. Nat. Rev. Genet. 12: 615-627.
-
(2011)
Nat. Rev. Genet
, vol.12
, pp. 615-627
-
-
Levin, H.L.1
Moran, J.V.2
-
18
-
-
79551599954
-
Establishment of molecular linkage maps using SRAP markers in sweet potato
-
Li, A.-X., Q.-C. Liu, Q.-M. Wang, L.-M. Zhang, H. Zhai and S.-Z. Liu (2010) Establishment of molecular linkage maps using SRAP markers in sweet potato. Acta Agron. Sin. 36: 1286-1295.
-
(2010)
Acta Agron. Sin
, vol.36
, pp. 1286-1295
-
-
Li, A.-X.1
Liu, Q.-C.2
Wang, Q.-M.3
Zhang, L.-M.4
Zhai, H.5
Liu, S.-Z.6
-
19
-
-
36349028715
-
Ty1-copia retrotransposon-based SSAP marker development and its potential in the genetic study of cucurbits
-
Lou, Q. and J. Chen (2007) Ty1-copia retrotransposon-based SSAP marker development and its potential in the genetic study of cucurbits. Genome 810: 802-810.
-
(2007)
Genome
, vol.810
, pp. 802-810
-
-
Lou, Q.1
Chen, J.2
-
21
-
-
84903837435
-
The FaRE1 LTRretrotransposon based SSAP markers reveal genetic polymorphism of strawberry (Fragaria × ananassa) cultivars
-
Melnikova, N.V., A.V. Kudryavtseva, A.S. Speranskaya, A.A. Krinitsina, A.A. Dmitriev, M.S. Belenikin, V.P. Upelniek, E.R. Batrak, I.S. Kovaleva and A.M. Kudryavtsev (2012) The FaRE1 LTRretrotransposon based SSAP markers reveal genetic polymorphism of strawberry (Fragaria × ananassa) cultivars. J. Agric. Sci. 4: 111-118.
-
(2012)
J. Agric. Sci
, vol.4
, pp. 111-118
-
-
Melnikova, N.V.1
Kudryavtseva, A.V.2
Speranskaya, A.S.3
Krinitsina, A.A.4
Dmitriev, A.A.5
Belenikin, M.S.6
Upelniek, V.P.7
Batrak, E.R.8
Kovaleva, I.S.9
Kudryavtsev, A.M.10
-
22
-
-
84928645015
-
Development of DNA markers for anthocyanin content purple sweet potato using active retrotransposon insertion polymorphisms
-
Monden, Y., A. Yamamoto and M. Tahara (2013) Development of DNA markers for anthocyanin content purple sweet potato using active retrotransposon insertion polymorphisms. DNA Polymorphism (DNA Takei) 21: 47-54.
-
(2013)
DNA Polymorphism (DNA Takei)
, vol.21
, pp. 47-54
-
-
Monden, Y.1
Yamamoto, A.2
Tahara, M.3
-
23
-
-
84909641057
-
Efficient screening of long terminal repeat retrotransposons that show high insertion polymorphism via high-throughput sequencing of the primer binding site
-
Monden, Y., N. Fujii, K. Yamaguchi, K. Ikeo, Y. Nakazawa, T. Waki, K. Hirashima, Y. Uchiyama and M. Tahara (2014a) Efficient screening of long terminal repeat retrotransposons that show high insertion polymorphism via high-throughput sequencing of the primer binding site. Genome 57: 245-252.
-
(2014)
Genome
, vol.57
, pp. 245-252
-
-
Monden, Y.1
Fujii, N.2
Yamaguchi, K.3
Ikeo, K.4
Nakazawa, Y.5
Waki, T.6
Hirashima, K.7
Uchiyama, Y.8
Tahara, M.9
-
24
-
-
85006669182
-
Characterization of a novel retrotransposon TriRe-1 using nullisomic-tetrasomic lines of hexaploid wheat
-
Monden, Y., T. Takai and M. Tahara (2014b) Characterization of a novel retrotransposon TriRe-1 using nullisomic-tetrasomic lines of hexaploid wheat. Sci. Rep. Facul. Agr. Okayama University 103: 21-30.
-
(2014)
Sci. Rep. Facul. Agr. Okayama University
, vol.103
, pp. 21-30
-
-
Monden, Y.1
Takai, T.2
Tahara, M.3
-
25
-
-
84903837014
-
Efficient DNA fingerprinting based on the targeted sequencing of active retrotransposon insertion sites using a bench-top high-throughput sequencing platform
-
Monden, Y., A. Yamamoto, A. Shindo and M. Tahara (2014c) Efficient DNA fingerprinting based on the targeted sequencing of active retrotransposon insertion sites using a bench-top high-throughput sequencing platform. DNA Res. 21: 491-498.
-
(2014)
DNA Res
, vol.21
, pp. 491-498
-
-
Monden, Y.1
Yamamoto, A.2
Shindo, A.3
Tahara, M.4
-
26
-
-
84888363451
-
Retrotransposon insertional polymorphism in Iranian bread wheat cultivars and breeding lines revealed by IRAP and REMAP markers
-
Nasri, S., B. Abdollahi Mandoulakani, R. Darvishzadeh and I. Bernousi (2013) Retrotransposon insertional polymorphism in Iranian bread wheat cultivars and breeding lines revealed by IRAP and REMAP markers. Biochem. Genet. 51: 927-943.
-
(2013)
Biochem. Genet
, vol.51
, pp. 927-943
-
-
Nasri, S.1
Abdollahi Mandoulakani, B.2
Darvishzadeh, R.3
Bernousi, I.4
-
27
-
-
77950939119
-
Mobilization of retrotransposons in synthetic allotetraploid tobacco
-
Petit, M., C. Guidat, J. Daniel, E. Denis, E. Montoriol, Q.T. Bui, K.Y. Lim, A. Kovarik, A.R. Leitch, M. Grandbastien et al. (2010) Mobilization of retrotransposons in synthetic allotetraploid tobacco. New Phytol. 186: 135-147.
-
(2010)
New Phytol
, vol.186
, pp. 135-147
-
-
Petit, M.1
Guidat, C.2
Daniel, J.3
Denis, E.4
Montoriol, E.5
Bui, Q.T.6
Lim, K.Y.7
Kovarik, A.8
Leitch, A.R.9
Grandbastien, M.10
-
28
-
-
84874359478
-
Advances in plant gene-targeted and functional markers: A review
-
Poczai, P., I. Varga, M. Laos, A. Cseh, N. Bell, J.P. Valkonen and J. Hyvönen (2013) Advances in plant gene-targeted and functional markers: a review. Plant Methods 9: 6.
-
(2013)
Plant Methods
, vol.9
, pp. 6
-
-
Poczai, P.1
Varga, I.2
Laos, M.3
Cseh, A.4
Bell, N.5
Valkonen, J.P.6
Hyvönen, J.7
-
29
-
-
2542424855
-
The application of LTR retrotransposons as molecular markers in plants
-
Schulman, A.H., A.H. Flavell and T.H.N. Ellis (2004) The application of LTR retrotransposons as molecular markers in plants. Methods Mol. Biol. 260: 145-173.
-
(2004)
Methods Mol. Biol
, vol.260
, pp. 145-173
-
-
Schulman, A.H.1
Flavell, A.H.2
Ellis, T.3
-
30
-
-
0002271753
-
Genomic structure of the sweet potato and hexaploids in Ipomoea trifida (HBK) DON
-
Shiotani, I. and T. Kawase (1989) Genomic structure of the sweet potato and hexaploids in Ipomoea trifida (HBK) DON. Jpn. J. Breed. 39: 57-66.
-
(1989)
Jpn. J. Breed
, vol.39
, pp. 57-66
-
-
Shiotani, I.1
Kawase, T.2
-
31
-
-
0345203138
-
Taxonomic significance of karyomorphology in Ipomoea spp
-
Sinha, S. and S.N. Sharma (1992) Taxonomic significance of karyomorphology in Ipomoea spp. Cytologia 57: 289-293.
-
(1992)
Cytologia
, vol.57
, pp. 289-293
-
-
Sinha, S.1
Sharma, S.N.2
-
32
-
-
79958728248
-
Genetic diversity of cultivated flax (Linum usitatissimum L.) germplasm assessed by retrotransposonbased markers
-
Smýkal, P., N. Bačová-Kerteszová, R. Kalendar, J. Corander, A.H. Schulman and M. Pavelek (2011) Genetic diversity of cultivated flax (Linum usitatissimum L.) germplasm assessed by retrotransposonbased markers. Theor. Appl. Genet. 122: 1385-1397.
-
(2011)
Theor. Appl. Genet
, vol.122
, pp. 1385-1397
-
-
Smýkal, P.1
Bačová-Kerteszová, N.2
Kalendar, R.3
Corander, J.4
Schulman, A.H.5
Pavelek, M.6
-
33
-
-
18844379442
-
Ty1-copia retrotransposon-based SSAP marker development in cashew (Anacardium occidentale L.)
-
Syed, N.H., S. Sureshsundar, M.J. Wilkinson, B.S. Bhau, J.J.V. Cavalcanti and A.J. Flavell (2005) Ty1-copia retrotransposon-based SSAP marker development in cashew (Anacardium occidentale L.). Theor. Appl. Genet. 110: 1195-1202.
-
(2005)
Theor. Appl. Genet
, vol.110
, pp. 1195-1202
-
-
Syed, N.H.1
Sureshsundar, S.2
Wilkinson, M.J.3
Bhau, B.S.4
Cavalcanti, J.5
Flavell, A.J.6
-
34
-
-
4544229957
-
Isolation of an active element from a highcopy-number family of retrotransposons in the sweet potato genome
-
Tahara, M., T. Aoki, S. Suzuka, H. Yamashita, M. Tanaka, S. Matsunaga and S. Kokumai (2004) Isolation of an active element from a highcopy-number family of retrotransposons in the sweet potato genome. Mol. Genet. Genomics 272: 116-127.
-
(2004)
Mol. Genet. Genomics
, vol.272
, pp. 116-127
-
-
Tahara, M.1
Aoki, T.2
Suzuka, S.3
Yamashita, H.4
Tanaka, M.5
Matsunaga, S.6
Kokumai, S.7
-
35
-
-
0001096725
-
Meiotic studies in the sweet potato (Ipomoea batatas Lam.)
-
Ting, Y.C. and A.E. Kehr (1953) Meiotic studies in the sweet potato (Ipomoea batatas Lam.). J. Hered. 44: 207-211.
-
(1953)
J. Hered
, vol.44
, pp. 207-211
-
-
Ting, Y.C.1
Kehr, A.E.2
-
36
-
-
0030683636
-
Autopolyploidy versus allopolyploidy and low-density randomly amplified polymorphic DNA linkage maps of sweet potato
-
Ukoskit, K. and P.G. Thompson (1997) Autopolyploidy versus allopolyploidy and low-density randomly amplified polymorphic DNA linkage maps of sweet potato. J. Amer. Soc. Hort. Sci. 122: 822-828.
-
(1997)
J. Amer. Soc. Hort. Sci
, vol.122
, pp. 822-828
-
-
Ukoskit, K.1
Thompson, P.G.2
-
37
-
-
0030991387
-
Genetic distribution of Bare-1-like retrotransposable elements in the barley genome revealed by sequencespecific amplification polymorphisms (S-SAP)
-
Waugh, R., K. McLean, A.J. Flavell, S.R. Pearce, A. Kumar, B.B. Thomas and W. Powell (1997) Genetic distribution of Bare-1-like retrotransposable elements in the barley genome revealed by sequencespecific amplification polymorphisms (S-SAP). Mol. Gen. Genet. 253: 687-694.
-
(1997)
Mol. Gen. Genet
, vol.253
, pp. 687-694
-
-
Waugh, R.1
McLean, K.2
Flavell, A.J.3
Pearce, S.R.4
Kumar, A.5
Thomas, B.B.6
Powell, W.7
-
38
-
-
84888013428
-
A genetic linkage map based on AFLP and SSR markers and mapping of QTL for dry-matter content in sweet potato
-
Zhao, N., X. Yu, Q. Jie, H. Li, H. Li, J. Hu, H. Zhai, S. He and Q. Liu (2013) A genetic linkage map based on AFLP and SSR markers and mapping of QTL for dry-matter content in sweet potato. Mol. Breed. 32: 807-820.
-
(2013)
Mol. Breed
, vol.32
, pp. 807-820
-
-
Zhao, N.1
Yu, X.2
Jie, Q.3
Li, H.4
Li, H.5
Hu, J.6
Zhai, H.7
He, S.8
Liu, Q.9
|