Pattern recognition of monosaccharides via a virtual lectin array constructed by boronate affinity-based ph-featured encoding

Analytical Chemistry

Volumn 87, Issue 8, 2015, Pages 4442-4447

  Bi, Xiaodong ^a   Li, Daojin ^a   Liu, Zhen ^a  

^a NANJING UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMIMETIC PROCESSES; BIOMIMETICS; CLUSTER ANALYSIS; ENCODING (SYMBOLS); GLUCOSE; PATTERN RECOGNITION; PRINCIPAL COMPONENT ANALYSIS;

ARTIFICIAL MATERIAL; CARBOHYDRATE CHEMISTRY; ENVIRONMENTAL PH; FEATURE GENERATION; GLYCOBIOLOGY; PATTERN RECOGNITION ALGORITHMS; PROOF OF CONCEPT; VIRTUAL ARRAY;

PROTEINS;

BORONIC ACID DERIVATIVE; LECTIN; MONOSACCHARIDE;

ALGORITHM; CHEMISTRY; PH; PRINCIPAL COMPONENT ANALYSIS;

ALGORITHMS; BORONIC ACIDS; HYDROGEN-ION CONCENTRATION; LECTINS; MONOSACCHARIDES; PRINCIPAL COMPONENT ANALYSIS;

EID: 84928485663     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/acs.analchem.5b01034     Document Type: Article

References (53)

1. Rudiger, H.; Gabius, H. J. Glycoconjugate J. 2001, 18, 589-613
2. Dwek, R. A. Chem. Rev. 1996, 96, 683-720
3. Bertozzi, C. R.; Kiessling, L. L. Science 2001, 291, 2357-2364
4. Rudd, P. M.; Elliott, T.; Cresswell, P.; Wilson, I. A.; Dwek, R. A. Science 2001, 291, 2370-2376
5. Flitsch, S. L.; Ulijn, R. V. Nature 2003, 421, 219-220
6. Clark, D.; Mao, L. Dis. Markers 2012, 33, 1-10
7. Gemeiner, P.; Mislovicova, D.; Tkac, J.; Svitel, J.; Patoprsty, V.; Hrabarova, E.; Kogan, G.; Kozar, T. Biotechnol. Adv. 2009, 27, 1-15
8. Hirabayashi, J. J. Biochem. 2008, 144, 139-147
9. Li, H.; Wei, L. M.; Fang, P.; Yang, P. Y. Anal. Methods 2014, 6, 2003-2014
10. Park, S.; Gildersleeve, J. C.; Blixt, O.; Shin, I. Chem. Soc. Rev. 2013, 42, 4310-4326
11. Hirabayashi, J.; Yamada, M.; Kuno, A.; Tateno, H. Chem. Soc. Rev. 2013, 42, 4443-4458
12. Gupta, G.; Surolia, A.; Sampathkumar, S. G. Omics 2010, 14, 419-436
13. Maynard, J. A.; Myhre, R.; Roy, B. Curr. Opin. Chem. Biol. 2007, 11, 306-315
14. Li, H. Y.; Liu, Z. TrAC, Trends Anal. Chem. 2012, 37, 148-161
15. Lu, Y.; Bie, Z. J.; Liu, Y. C.; Liu, Z. Analyst 2013, 138, 290-298
16. Xu, Z. F.; Uddin, K.M. A.; Kamra, T.; Schnadt, J.; Ye, L. ACS Appl. Mater. Interfaces 2014, 6, 1406-1414
17. Chen, W.; Mehta, S. C.; Lu, D. R. Adv. Drug Delivery Rev. 1997, 26, 231-247
18. Zhao, Y.; Trewyn, B. G.; Slowing, I. I.; Lin, V. S. Y. J. Am. Chem. Soc. 2009, 131, 8398-8400
19. Chen, W.; Cheng, Y.; Wang, B. H. Angew. Chem., Int. Ed. 2012, 51, 5293-5295
20. Ellis, G. A.; Palte, M. J.; Raines, R. T. J. Am. Chem. Soc. 2012, 134, 3631-3634
21. Li, Y.; Xiao, W.; Xiao, K.; Berti, L.; Luo, J.; Tseng, H. P.; Fung, G.; Lam, K. S. Angew. Chem., Int. Ed. 2012, 51, 2864-2869
22. Chen, X.; Wu, P.; Rousseas, M.; Okawa, D.; Gartner, Z.; Zettl, A.; Bertozzi, C. R. J. Am. Chem. Soc. 2009, 131, 890-891
23. Yan, J.; Fang, H.; Wang, B. H. Med. Res. Rev. 2005, 25, 490-520
24. Nishiyabu, R.; Kubo, Y.; James, T. D.; Fossey, J. S. Chem. Commun. 2011, 47, 1106-1123
25. Arnaud, J.; Audfray, A.; Imberty, A. Chem. Soc. Rev. 2013, 42, 4798-4813
26. Wu, X.; Li, Z.; Chen, X. X.; Fossey, J. S.; James, T. D.; Fossey, J. S. Chem. Soc. Rev. 2013, 42, 8032-8048
27. Wulff, G.; Schauhoff, S. J. Org. Chem. 1991, 56, 395-400
28. Vozzi, G.; Morelli, I.; Vozzi, F.; Andreoni, C.; Salsedo, E.; Morachioli, A.; Giusti, P.; Ciardelli, G. Biotechnol. Bioeng. 2010, 106, 804-817
29. Tan, J.; Wang, H.-F.; Yan, X.-P. Anal. Chem. 2009, 81, 5273-5280
30. Parmpi, P.; Kofinas, P. Biomaterials 2004, 25, 1969-1973
31. Miyahara, T.; Kurihara, K. Chem. Lett. 2000, 12, 1356-1357
32. Cullen, P.; Lorkowski, S. Expert Opin. Ther. Pat. 2002, 12, 1783-1794
33. Eickhoff, H.; Konthur, Z.; Lueking, A.; Lehrach, H.; Walter, G.; Nordhoff, E.; Nyarsik, L.; Bussow, K. Adv. Biochem. Eng./Biotechnol. 2002, 77, 103-112
34. Hudson, J.; Altamirano, M. J. Ethnopharmacol. 2006, 108, 2-15
35. Kricka, L. J.; Imai, K.; Fortina, P. Clin. Chem. 2010, 56, 1797-1803
36. Shibata, D. Am. J. Pathol. 1999, 154, 979-980
37. Albert, K. J.; Lewis, N. S.; Schauer, C. L.; Sotzing, G. A.; Stitzel, S. E.; Vaid, T. P.; Walt, D. R. Chem. Rev. 2000, 100, 2595-2626
38. Lu, J. H.; Teh, C.; Kishore, U.; Reid, K. B. M. Biochim. Biophys. Acta-Gen. Subj. 2002, 1572, 387-400
39. Adhikari, B.; Majumdar, S. Prog. Polym. Sci. 2004, 29, 699-766
40. Lavine, B. K.; Davidson, C. E.; Rayens, W. S. Comb. Chem. High Throughput Screening 2004, 7, 115-131
41. Scott, S. M.; James, D.; Ali, Z. Microchim. Acta 2006, 156, 183-207
42. Liu, Y.; Ding, L.; Cao, Y.; Fang, Y. Prog. Chem. 2012, 24, 1915-1927
43. Jain, A. K.; Duin, R. P. W.; Mao, J. C. IEEE Trans. Pattern Anal. Mach. Intell. 2000, 22, 4-37
44. Suri, J. S. Pattern Anal. Appl. 2000, 3, 209-242
45. Yang, M. H.; Kriegman, D. J.; Ahuja, N. IEEE Trans. Pattern Anal. Mach. Intell. 2002, 24, 34-58
46. Theodoridis, S.; Koutroumbas, K. Pattern Recognition, 4 th ed.; China Machine Press: Beijing, China, 2009.
47. Lü, C. C.; Li, H. Y.; Wang, H. Y.; Liu, Z. Anal. Chem. 2013, 85, 2361-2369
48. Springsteen, G.; Wang, B. H. Chem. Commun. 2001, 17, 1608-1609
49. Bi, X. D.; Liu, Z. Anal. Chem. 2014, 86, 959-966
50. Springsteen, G.; Wang, B. H. Tetrahedron 2002, 58, 5291-5300
51. Yan, J.; Springsteen, G.; Deeter, S.; Wang, B. H. Tetrahedron 2004, 60, 11205-11209
52. Shariki, S.; Cox, O. T. L.; Tickell, D. A.; Morais, M. P. P.; van den Elsen, J. M. H.; James, T. D.; Dale, S. E. C.; Bending, S.; Marken, F. J. Mater. Chem. 2012, 22, 18999-19006
53. Zhang, R.; Miao, J. P.; Ge, C. H.; Zhang, M. Y.; Wang, L. X.; Zhang, X. D. Sens. Actuators, B: Chem. 2014, 198, 260-267