메뉴 건너뛰기




Volumn 10, Issue 4, 2015, Pages

Identification, diversity and evolution of MITEs in the genomes of microsporidian nosema parasites

Author keywords

[No Author keywords available]

Indexed keywords

DNA; FUNGAL PROTEIN; FUNGAL RNA; TRANSPOSON;

EID: 84928386740     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0123170     Document Type: Article
Times cited : (6)

References (50)
  • 1
    • 77957118462 scopus 로고    scopus 로고
    • Burst expansion, distribution and diversification of MITEs in the silkworm genome
    • PMID: 20875122
    • Han MJ, Shen YH, Gao YH, Chen LY, Xiang ZH, Zhang Z. Burst expansion, distribution and diversification of MITEs in the silkworm genome. BMC genomics. 2010; 11:520. doi: 10.1186/1471-2164-11-520 PMID: 20875122
    • (2010) BMC Genomics. , vol.11 , pp. 520
    • Han, M.J.1    Shen, Y.H.2    Gao, Y.H.3    Chen, L.Y.4    Xiang, Z.H.5    Zhang, Z.6
  • 2
    • 54249135347 scopus 로고    scopus 로고
    • A genome-wide view of miniature inverted-repeat transposable elements (MITEs) in rice, Oryza sativa ssp. japonica
    • Oki N, Yano K, Okumoto Y, Tsukiyama T, Teraishi M, Tanisaka T. A genome-wide view of miniature inverted-repeat transposable elements (MITEs) in rice, Oryza sativa ssp. japonica. Genes & genetic systems. 2008; 83(4).
    • (2008) Genes & Genetic Systems. , vol.83 , Issue.4
    • Oki, N.1    Yano, K.2    Okumoto, Y.3    Tsukiyama, T.4    Teraishi, M.5    Tanisaka, T.6
  • 4
    • 0035852717 scopus 로고    scopus 로고
    • Eight novel families of miniature inverted repeat transposable elements in the African malaria mosquito, Anopheles gambiae
    • PMID: 11172014
    • Tu Z. Eight novel families of miniature inverted repeat transposable elements in the African malaria mosquito, Anopheles gambiae. Proceedings of the National Academy of Sciences of the United States of America. 2001; 98(4):1699-704. PMID: 11172014
    • (2001) Proceedings of the National Academy of Sciences of the United States of America. , vol.98 , Issue.4 , pp. 1699-1704
    • Tu, Z.1
  • 5
    • 0026940433 scopus 로고
    • Tourist: A large family of small inverted repeat elements frequently associated with maize genes
    • PMID: 1332797
    • Bureau TE, Wessler SR. Tourist: a large family of small inverted repeat elements frequently associated with maize genes. The Plant Cell Online. 1992; 4(10):1283-94. PMID: 1332797
    • (1992) The Plant Cell Online. , vol.4 , Issue.10 , pp. 1283-1294
    • Bureau, T.E.1    Wessler, S.R.2
  • 6
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • PMID: 11237011
    • Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, et al. Initial sequencing and analysis of the human genome. Nature. 2001; 409(6822):860-921. PMID: 11237011
    • (2001) Nature. , vol.409 , Issue.6822 , pp. 860-921
    • Lander, E.S.1    Linton, L.M.2    Birren, B.3    Nusbaum, C.4    Zody, M.C.5    Baldwin, J.6
  • 7
    • 84865578632 scopus 로고    scopus 로고
    • Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution. TAG Theoretical and applied genetics Theoretische und angewandte
    • PMID: 22286503
    • Yaakov B, Ceylan E, Domb K, Kashkush K. Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution. TAG Theoretical and applied genetics Theoretische und angewandte Genetik. 2012; 124(7):1365-73. doi: 10.1007/s00122-012-1793-y PMID: 22286503
    • (2012) Genetik , vol.124 , Issue.7 , pp. 1365-1373
    • Yaakov, B.1    Ceylan, E.2    Domb, K.3    Kashkush, K.4
  • 8
    • 70249087648 scopus 로고    scopus 로고
    • Tuned for transposition: Molecular determinants underlying the hyperactivity of a Stowaway MITE
    • PMID: 19745152
    • Yang G, Nagel DH, Feschotte C, Hancock CN, Wessler SR. Tuned for transposition: molecular determinants underlying the hyperactivity of a Stowaway MITE. Science. 2009; 325(5946):1391-4. doi: 10.1126/science.1175688 PMID: 19745152
    • (2009) Science. , vol.325 , Issue.5946 , pp. 1391-1394
    • Yang, G.1    Nagel, D.H.2    Feschotte, C.3    Hancock, C.N.4    Wessler, S.R.5
  • 10
    • 0036250001 scopus 로고    scopus 로고
    • Plant transposable elements: Where genetics meets genomics
    • PMID: 11988759
    • Feschotte C, Jiang N, Wessler SR. Plant transposable elements: where genetics meets genomics. Nature Reviews Genetics. 2002; 3(5):329-41. PMID: 11988759
    • (2002) Nature Reviews Genetics. , vol.3 , Issue.5 , pp. 329-341
    • Feschotte, C.1    Jiang, N.2    Wessler, S.R.3
  • 11
    • 84875514431 scopus 로고    scopus 로고
    • Characterization of a new high copy Stowaway family MITE, BRAMI-1 in Brassica genome
    • PMID: 23547712
    • Sampath P, Lee SC, Lee J, Izzah NK, Choi BS, Jin M, et al. Characterization of a new high copy Stowaway family MITE, BRAMI-1 in Brassica genome. BMC plant biology. 2013; 13:56. doi: 10.1186/1471-2229-13-56 PMID: 23547712
    • (2013) BMC Plant Biology. , vol.13 , pp. 56
    • Sampath, P.1    Lee, S.C.2    Lee, J.3    Izzah, N.K.4    Choi, B.S.5    Jin, M.6
  • 12
    • 70350515004 scopus 로고    scopus 로고
    • Unexpected consequences of a sudden and massive transposon amplification on rice gene expression
    • PMID: 19847266
    • Naito K, Zhang F, Tsukiyama T, Saito H, Hancock CN, Richardson AO, et al. Unexpected consequences of a sudden and massive transposon amplification on rice gene expression. Nature. 2009; 461(7267):1130-4. doi: 10.1038/nature08479 PMID: 19847266
    • (2009) Nature. , vol.461 , Issue.7267 , pp. 1130-1134
    • Naito, K.1    Zhang, F.2    Tsukiyama, T.3    Saito, H.4    Hancock, C.N.5    Richardson, A.O.6
  • 13
    • 0036090123 scopus 로고    scopus 로고
    • Genome-wide distribution and potential regulatory functions of AtATE, a novel family of miniature inverted-repeat transposable elements in Arabidopsis thaliana
    • PMID: 12111553
    • El Amrani A, Marie L, Ainouche A, Nicolas J, Couee I. Genome-wide distribution and potential regulatory functions of AtATE, a novel family of miniature inverted-repeat transposable elements in Arabidopsis thaliana. Molecular genetics and genomics: MGG. 2002; 267(4):459-71. PMID: 12111553
    • (2002) Molecular genetics and genomics: MGG , vol.267 , Issue.4 , pp. 459-471
    • El Amrani, A.1    Marie, L.2    Ainouche, A.3    Nicolas, J.4    Couee, I.5
  • 14
    • 31344455118 scopus 로고    scopus 로고
    • A two-edged role for the transposable element Kiddo in the rice ubiquitin2 promoter
    • PMID: 15805485
    • Yang G, Lee YH, Jiang Y, Shi X, Kertbundit S, Hall TC. A two-edged role for the transposable element Kiddo in the rice ubiquitin2 promoter. The Plant cell. 2005; 17(5):1559-68. PMID: 15805485
    • (2005) The Plant Cell. , vol.17 , Issue.5 , pp. 1559-1568
    • Yang, G.1    Lee, Y.H.2    Jiang, Y.3    Shi, X.4    Kertbundit, S.5    Hall, T.C.6
  • 15
    • 84899701665 scopus 로고    scopus 로고
    • Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea
    • PMID: 24747717
    • Sampath P, Murukarthick J, Izzah NK, Lee J, Choi HI, Shirasawa K, et al. Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea. PloS one. 2014; 9(4):e94499. doi: 10.1371/journal.pone.0094499 PMID: 24747717
    • (2014) PloS One. , vol.9 , Issue.4 , pp. e94499
    • Sampath, P.1    Murukarthick, J.2    Izzah, N.K.3    Lee, J.4    Choi, H.I.5    Shirasawa, K.6
  • 16
    • 51349111169 scopus 로고    scopus 로고
    • Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome
    • PMID: 18612649
    • Lyons M, Cardle L, Rostoks N, Waugh R, Flavell AJ. Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome. Molecular Genetics and Genomics. 2008; 280(4):275-85. doi: 10.1007/s00438-008-0363-0 PMID: 18612649
    • (2008) Molecular Genetics and Genomics. , vol.280 , Issue.4 , pp. 275-285
    • Lyons, M.1    Cardle, L.2    Rostoks, N.3    Waugh, R.4    Flavell, A.J.5
  • 17
    • 61449173808 scopus 로고    scopus 로고
    • Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: New functional implications for MITEs
    • PMID: 19037014
    • Kuang H, Padmanabhan C, Li F, Kamei A, Bhaskar PB, Ouyang S, et al. Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs. Genome research. 2009; 19(1):42-56. doi: 10.1101/gr.078196.108 PMID: 19037014
    • (2009) Genome Research. , vol.19 , Issue.1 , pp. 42-56
    • Kuang, H.1    Padmanabhan, C.2    Li, F.3    Kamei, A.4    Bhaskar, P.B.5    Ouyang, S.6
  • 18
    • 84860654433 scopus 로고    scopus 로고
    • Transposable-element associated small RNAs in Bombyx mori genome
    • PMID: 22662121
    • Cai Y, Zhou Q, Yu C, Wang X, Hu S, Yu J, et al. Transposable-element associated small RNAs in Bombyx mori genome. PloS one. 2012; 7(5):e36599. doi: 10.1371/journal.pone.0036599 PMID: 22662121
    • (2012) PloS One. , vol.7 , Issue.5 , pp. e36599
    • Cai, Y.1    Zhou, Q.2    Yu, C.3    Wang, X.4    Hu, S.5    Yu, J.6
  • 19
    • 84859636050 scopus 로고    scopus 로고
    • A Gaijin-like miniature inverted repeat transposable element is mobilized in rice during cell differentiation
    • PMID: 22500940
    • Dong HT, Zhang L, Zheng KL, Yao HG, Chen J, Yu FC, et al. A Gaijin-like miniature inverted repeat transposable element is mobilized in rice during cell differentiation. BMC genomics. 2012; 13:135. doi: 10.1186/1471-2164-13-135 PMID: 22500940
    • (2012) BMC Genomics. , vol.13 , pp. 135
    • Dong, H.T.1    Zhang, L.2    Zheng, K.L.3    Yao, H.G.4    Chen, J.5    Yu, F.C.6
  • 20
    • 78751661821 scopus 로고    scopus 로고
    • Miniature inverted-repeat transposable elements of Stowaway are active in potato
    • PMID: 20610409
    • Momose M, Abe Y, Ozeki Y. Miniature inverted-repeat transposable elements of Stowaway are active in potato. Genetics. 2010; 186(1):59-66. doi: 10.1534/genetics.110.117606 PMID: 20610409
    • (2010) Genetics. , vol.186 , Issue.1 , pp. 59-66
    • Momose, M.1    Abe, Y.2    Ozeki, Y.3
  • 21
    • 34250216420 scopus 로고    scopus 로고
    • The ancient mariner sails again: Transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends
    • PMID: 17403897
    • Miskey C, Papp B, Mates L, Sinzelle L, Keller H, Izsvak Z, et al. The ancient mariner sails again: transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends. Molecular and cellular biology. 2007; 27(12):4589-600. PMID: 17403897
    • (2007) Molecular and Cellular Biology. , vol.27 , Issue.12 , pp. 4589-4600
    • Miskey, C.1    Papp, B.2    Mates, L.3    Sinzelle, L.4    Keller, H.5    Izsvak, Z.6
  • 22
    • 33846514538 scopus 로고    scopus 로고
    • Transposition of a fungal miniature inverted-repeat transposable element through the action of a Tc1-like transposase
    • PMID: 17179071
    • Dufresne M, Hua-Van A, El Wahab HA, Ben M'Barek S, Vasnier C, Teysset L, et al. Transposition of a fungal miniature inverted-repeat transposable element through the action of a Tc1-like transposase. Genetics. 2007; 175(1):441-52. PMID: 17179071
    • (2007) Genetics. , vol.175 , Issue.1 , pp. 441-452
    • Dufresne, M.1    Hua-Van, A.2    El Wahab, H.A.3    Ben M'Barek, S.4    Vasnier, C.5    Teysset, L.6
  • 23
    • 84877931772 scopus 로고    scopus 로고
    • A rice stowaway MITE for gene transfer in yeast
    • PMID: 23704977
    • Fattash I, Bhardwaj P, Hui C, Yang G. A rice stowaway MITE for gene transfer in yeast. PloS one. 2013; 8(5):e64135. doi: 10.1371/journal.pone.0064135 PMID: 23704977
    • (2013) PloS One. , vol.8 , Issue.5 , pp. e64135
    • Fattash, I.1    Bhardwaj, P.2    Hui, C.3    Yang, G.4
  • 26
    • 84874937689 scopus 로고    scopus 로고
    • Comparative genomics of parasitic silkworm microsporidia reveal an association between genome expansion and host adaptation
    • Pan G, Xu J, Li T, Xia Q, Liu S-L, Zhang G, et al. Comparative genomics of parasitic silkworm microsporidia reveal an association between genome expansion and host adaptation. BMC genomics. 2013; 14(1):186.
    • (2013) BMC Genomics. , vol.14 , Issue.1 , pp. 186
    • Pan, G.1    Xu, J.2    Li, T.3    Xia, Q.4    Liu, S.-L.5    Zhang, G.6
  • 27
    • 78649376587 scopus 로고    scopus 로고
    • Improving phylogenetic inference of microsporidian Nosema antheraeae among Nosema species with RPB1, α-and β-tubulin sequences
    • Xu J, Zhou Z. Improving phylogenetic inference of microsporidian Nosema antheraeae among Nosema species with RPB1, α-and β-tubulin sequences. Afr J Biotechnol. 2010; 9:7900-4.
    • (2010) Afr J Biotechnol. , vol.9 , pp. 7900-7904
    • Xu, J.1    Zhou, Z.2
  • 28
    • 33748664836 scopus 로고    scopus 로고
    • Nosema ceranae, a new microsporidian parasite in honeybees in Europe
    • PMID: 16574143
    • Higes M, Martín R, Meana A. Nosema ceranae, a new microsporidian parasite in honeybees in Europe. Journal of invertebrate pathology. 2006; 92(2):93-5. PMID: 16574143
    • (2006) Journal of Invertebrate Pathology. , vol.92 , Issue.2 , pp. 93-95
    • Higes, M.1    Martín, R.2    Meana, A.3
  • 29
    • 33746712314 scopus 로고    scopus 로고
    • The varying microsporidian genome: Existence of long-terminal repeat retrotransposon in domesticated silkworm parasite Nosema bombycis
    • PMID: 16797019
    • Xu J, Pan G, Fang L, Li J, Tian X, Li T, et al. The varying microsporidian genome: existence of long-terminal repeat retrotransposon in domesticated silkworm parasite Nosema bombycis. International journal for parasitology. 2006; 36(9):1049-56. PMID: 16797019
    • (2006) International Journal for Parasitology. , vol.36 , Issue.9 , pp. 1049-1056
    • Xu, J.1    Pan, G.2    Fang, L.3    Li, J.4    Tian, X.5    Li, T.6
  • 30
    • 84879826379 scopus 로고    scopus 로고
    • Genome sequencing and comparative genomics of honey bee microsporidia, Nosema apis reveal novel insights into host-parasite interactions
    • Chen Yp, Pettis J, Zhao Y, Liu X, Tallon L, Sadzewicz L, et al. Genome sequencing and comparative genomics of honey bee microsporidia, Nosema apis reveal novel insights into host-parasite interactions. BMC genomics. 2013; 14(1):451.
    • (2013) BMC Genomics. , vol.14 , Issue.1 , pp. 451
    • Chen, Y.1    Pettis, J.2    Zhao, Y.3    Liu, X.4    Tallon, L.5    Sadzewicz, L.6
  • 31
    • 84884633208 scopus 로고    scopus 로고
    • The genome of Spraguea lophii and the basis of host-microsporidian interactions
    • PMID: 23990793
    • Campbell SE, Williams TA, Yousuf A, Soanes DM, Paszkiewicz KH, Williams BA. The genome of Spraguea lophii and the basis of host-microsporidian interactions. PLoS genetics. 2013; 9(8):e1003676. doi: 10.1371/journal.pgen.1003676 PMID: 23990793
    • (2013) PLoS Genetics. , vol.9 , Issue.8 , pp. e1003676
    • Campbell, S.E.1    Williams, T.A.2    Yousuf, A.3    Soanes, D.M.4    Paszkiewicz, K.H.5    Williams, B.A.6
  • 33
    • 84868125815 scopus 로고    scopus 로고
    • The genome of the obligate intracellular parasite Trachipleistophora hominis: New insights into microsporidian genome dynamics and reductive evolution
    • PMID: 23133373
    • Heinz E, Williams TA, Nakjang S, Noel CJ, Swan DC, Goldberg AV, et al. The genome of the obligate intracellular parasite Trachipleistophora hominis: new insights into microsporidian genome dynamics and reductive evolution. PLoS pathogens. 2012; 8(10):e1002979. doi: 10.1371/journal.ppat.1002979 PMID: 23133373
    • (2012) PLoS Pathogens. , vol.8 , Issue.10 , pp. e1002979
    • Heinz, E.1    Williams, T.A.2    Nakjang, S.3    Noel, C.J.4    Swan, D.C.5    Goldberg, A.V.6
  • 34
    • 84869426527 scopus 로고    scopus 로고
    • Microsporidian genome analysis reveals evolutionary strategies for obligate intracellular growth
    • PMID: 22813931
    • Cuomo CA, Desjardins CA, Bakowski MA, Goldberg J, Ma AT, Becnel JJ, et al. Microsporidian genome analysis reveals evolutionary strategies for obligate intracellular growth. Genome research. 2012; 22 (12):2478-88. doi: 10.1101/gr.142802.112 PMID: 22813931
    • (2012) Genome Research. , vol.22 , Issue.12 , pp. 2478-2488
    • Cuomo, C.A.1    Desjardins, C.A.2    Bakowski, M.A.3    Goldberg, J.4    Ma, A.T.5    Becnel, J.J.6
  • 35
    • 75349085888 scopus 로고    scopus 로고
    • Draft genome sequence of the Daphnia pathogen Octosporea bayeri: Insights into the gene content of a large microsporidian genome and a model for host-parasite interactions
    • PMID: 19807911
    • Corradi N, Haag KL, Pombert JF, Ebert D, Keeling PJ. Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions. Genome biology. 2009; 10(10):R106. doi: 10.1186/gb-2009-10-10-r106 PMID: 19807911
    • (2009) Genome Biology. , vol.10 , Issue.10 , pp. R106
    • Corradi, N.1    Haag, K.L.2    Pombert, J.F.3    Ebert, D.4    Keeling, P.J.5
  • 36
    • 67650930861 scopus 로고    scopus 로고
    • Genomic analyses of the microsporidian Nosema ceranae, an emergent pathogen of honey bees
    • PMID: 19503607
    • Cornman RS, Chen YP, Schatz MC, Street C, Zhao Y, Desany B, et al. Genomic analyses of the microsporidian Nosema ceranae, an emergent pathogen of honey bees. PLoS pathogens. 2009; 5(6):e1000466. doi: 10.1371/journal.ppat.1000466 PMID: 19503607
    • (2009) PLoS Pathogens. , vol.5 , Issue.6 , pp. e1000466
    • Cornman, R.S.1    Chen, Y.P.2    Schatz, M.C.3    Street, C.4    Zhao, Y.5    Desany, B.6
  • 37
    • 44149118881 scopus 로고    scopus 로고
    • Genome sequence surveys of Brachiola algerae and Edhazardia aedis reveal microsporidia with low gene densities
    • PMID: 18445287
    • Williams BA, Lee RC, Becnel JJ, Weiss LM, Fast NM, Keeling PJ. Genome sequence surveys of Brachiola algerae and Edhazardia aedis reveal microsporidia with low gene densities. BMC genomics. 2008; 9:200. doi: 10.1186/1471-2164-9-200 PMID: 18445287
    • (2008) BMC Genomics. , vol.9 , pp. 200
    • Williams, B.A.1    Lee, R.C.2    Becnel, J.J.3    Weiss, L.M.4    Fast, N.M.5    Keeling, P.J.6
  • 38
    • 84901810707 scopus 로고    scopus 로고
    • Evidence of horizontal transfer of non-autonomous Lep1 Helitrons facilitated by host-parasite interactions
    • PMID: 24874102
    • Guo X, Gao J, Li F, Wang J. Evidence of horizontal transfer of non-autonomous Lep1 Helitrons facilitated by host-parasite interactions. Scientific reports. 2014; 4:5119. doi: 10.1038/srep05119 PMID: 24874102
    • (2014) Scientific Reports , vol.4 , pp. 5119
    • Guo, X.1    Gao, J.2    Li, F.3    Wang, J.4
  • 39
    • 84878385439 scopus 로고    scopus 로고
    • Characterization of active ribosomal RNA harboring MITEs insertion in microsporidian Nosema bombycis genome
    • PMID: 23254587
    • Liu H, Pan G, Dang X, Li T, Zhou Z. Characterization of active ribosomal RNA harboring MITEs insertion in microsporidian Nosema bombycis genome. Parasitology research. 2013; 112(3):1011-20. doi: 10.1007/s00436-012-3223-0 PMID: 23254587
    • (2013) Parasitology Research. , vol.112 , Issue.3 , pp. 1011-1020
    • Liu, H.1    Pan, G.2    Dang, X.3    Li, T.4    Zhou, Z.5
  • 40
    • 78650432054 scopus 로고    scopus 로고
    • MITE-Hunter: A program for discovering miniature inverted-repeat transposable elements from genomic sequences
    • PMID: 20880995
    • Han Y, Wessler SR. MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences. Nucleic acids research. 2010; 38(22):e199. doi: 10.1093/nar/gkq862 PMID: 20880995
    • (2010) Nucleic Acids Research. , vol.38 , Issue.22 , pp. e199
    • Han, Y.1    Wessler, S.R.2
  • 42
    • 13244255415 scopus 로고    scopus 로고
    • MUSCLE: A multiple sequence alignment method with reduced time and space complexity
    • Edgar RC. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC bioinformatics. 2004; 5(1):113.
    • (2004) BMC Bioinformatics. , vol.5 , Issue.1 , pp. 113
    • Edgar, R.C.1
  • 43
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • PMID: 21546353
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular biology and evolution. 2011; 28(10):2731-9. doi: 10.1093/molbev/msr121 PMID: 21546353
    • (2011) Molecular Biology and Evolution. , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 44
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead B, Salzberg SL. Fast gapped-read alignment with Bowtie 2. Nat Meth. 2012; 9(4):357-9.
    • (2012) Nat Meth. , vol.9 , Issue.4 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 46
    • 84924937467 scopus 로고    scopus 로고
    • An Adaptive Transposable Element Insertion in the Regulatory Region of the EO Gene in the Domesticated Silkworm, Bombyx mori
    • PMID: 25213334
    • Sun W, Shen YH, Han MJ, Cao YF, Zhang Z. An Adaptive Transposable Element Insertion in the Regulatory Region of the EO Gene in the Domesticated Silkworm, Bombyx mori. Molecular biology and evolution. 2014; 31(12):3302-13. doi: 10.1093/molbev/msu261 PMID: 25213334
    • (2014) Molecular Biology and Evolution. , vol.31 , Issue.12 , pp. 3302-3313
    • Sun, W.1    Shen, Y.H.2    Han, M.J.3    Cao, Y.F.4    Zhang, Z.5
  • 47
    • 0035936144 scopus 로고    scopus 로고
    • Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi
    • PMID: 11719806
    • Katinka MD, Duprat S, Cornillot E, Méténier G, Thomarat F, Prensier G, et al. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Nature. 2001; 414(6862):450-3. PMID: 11719806
    • (2001) Nature. , vol.414 , Issue.6862 , pp. 450-453
    • Katinka, M.D.1    Duprat, S.2    Cornillot, E.3    Méténier, G.4    Thomarat, F.5    Prensier, G.6
  • 48
    • 0021715393 scopus 로고
    • The significance of responses of the genome to challenge
    • 16; 0036-8075 (Print)
    • McClintock B. The significance of responses of the genome to challenge. Science 1984;16; 226(4676) (0036-8075 (Print)):792-801.
    • (1984) Science , vol.226 , Issue.4676 , pp. 792-801
    • McClintock, B.1
  • 49
    • 68349154098 scopus 로고    scopus 로고
    • Tissue culture-induced transpositional activity of mPing is correlated with cytosine methylation in rice
    • PMID: 19604382
    • Ngezahayo F, Xu C, Wang H, Jiang L, Pang J, Liu B. Tissue culture-induced transpositional activity of mPing is correlated with cytosine methylation in rice. BMC plant biology. 2009; 9:91. doi: 10.1186/1471-2229-9-91 PMID: 19604382
    • (2009) BMC Plant Biology. , vol.9 , pp. 91
    • Ngezahayo, F.1    Xu, C.2    Wang, H.3    Jiang, L.4    Pang, J.5    Liu, B.6
  • 50
    • 84863116863 scopus 로고    scopus 로고
    • Miniature inverted-repeat transposable elements (MITEs) have been accumulated through amplification bursts and play important roles in gene expression and species diversity in Oryza sativa
    • PMID: 22096216
    • Lu C, Chen J, Zhang Y, Hu Q, Su W, Kuang H. Miniature inverted-repeat transposable elements (MITEs) have been accumulated through amplification bursts and play important roles in gene expression and species diversity in Oryza sativa. Molecular biology and evolution. 2012; 29(3):1005-17. doi: 10.1093/molbev/msr282 PMID: 22096216
    • (2012) Molecular Biology and Evolution. , vol.29 , Issue.3 , pp. 1005-1017
    • Lu, C.1    Chen, J.2    Zhang, Y.3    Hu, Q.4    Su, W.5    Kuang, H.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.