-
2
-
-
0014789144
-
Nosema algerae n. sp. (Cnidospora, Microsporida) a pathogen in a laboratory colony of Anopheles stephensi Liston (Diptera, Culicidae)
-
Vavra, J. & Undeen, A. H. Nosema algerae n. sp. (Cnidospora, Microsporida) a pathogen in a laboratory colony of Anopheles stephensi Liston (Diptera, Culicidae). J. Protozool. 17, 240-249 (1970).
-
(1970)
J. Protozool.
, vol.17
, pp. 240-249
-
-
Vavra, J.1
Undeen, A.H.2
-
3
-
-
20444448580
-
Public health importance of Brachiola algerae (Microsporidia) - An emerging pathogen of humans
-
Visvesvara, G. S., Moura, H., Leitch, G. J., Schwartz, D. A. & Xiao, L. X. Public health importance of Brachiola algerae (Microsporidia)-an emerging pathogen of humans. Folia. Parasitol. 52, 83-94 (2005). (Pubitemid 40817024)
-
(2005)
Folia Parasitologica
, vol.52
, Issue.1-2
, pp. 83-94
-
-
Visvesvara, G.S.1
Moura, H.2
Leitch, G.J.3
Schwartz, D.A.4
Xiao, L.X.5
-
4
-
-
3042551358
-
Fatal myositis due to the microsporidian Brachiola algerae, a mosquito pathogen
-
DOI 10.1056/NEJMoa032655
-
Coyle, C. M. et al. Fatal myositis due to the microsporidian Brachiola algerae, a mosquito pathogen. N. Engl. J. Med. 351, 42-47 (2004). (Pubitemid 38857246)
-
(2004)
New England Journal of Medicine
, vol.351
, Issue.1
, pp. 42-47
-
-
Coyle, C.M.1
Weiss, L.M.2
Rhodes III, L.V.3
Cali, A.4
Takvorian, P.M.5
Brown, D.F.6
Visvesvara, G.S.7
Xiao, L.8
Naktin, J.9
Young, E.10
Gareca, M.11
Colasante, G.12
Wittner, M.13
-
5
-
-
0026544098
-
The efect of nosematosis on the development of Plasmodium falciparum in Anopheles stephensi
-
Margos, G., Maier, W. A. & Seitz, H. M. The efect of nosematosis on the development of Plasmodium falciparum in Anopheles stephensi. Parasitol. Res. 78, 168-171 (1992).
-
(1992)
Parasitol. Res.
, vol.78
, pp. 168-171
-
-
Margos, G.1
Maier, W.A.2
Seitz, H.M.3
-
6
-
-
0033199913
-
In vitro replication of Nosema algerae (Microsporidia), a parasite of anopheline mosquitoes, in human cells above 36°C
-
Trammer, T., Chioralia, G., Maier, W. A. & Seitz, H. M. In vitro replication of Nosema algerae (Microsporidia), a parasite of anopheline mosquitoes, in human cells above 36 degrees C. J. Eukaryot. Microbiol. 46, 464-468 (1999). (Pubitemid 29471717)
-
(1999)
Journal of Eukaryotic Microbiology
, vol.46
, Issue.5
, pp. 464-468
-
-
Trammer, T.1
Chioralia, G.2
Maier, W.A.3
Seitz, H.M.4
-
7
-
-
36148961222
-
In vitro propagation of the microsporidian pathogen Brachiola algerae and studies of its chromosome and ribosomal DNA organization in the context of the complete genome sequencing project
-
DOI 10.1016/j.parint.2007.09.002, PII S1383576907001225
-
Belkorchia, A. et al. In vitro propagation of the microsporidian pathogen Brachiola algerae and studies of its chromosome and ribosomal DNA organization in the context of the complete genome sequencing project. Parasitol Int 57, 62-71 (2008). (Pubitemid 350116687)
-
(2008)
Parasitology International
, vol.57
, Issue.1
, pp. 62-71
-
-
Belkorchia, A.1
Biderre, C.2
Militon, C.3
Polonais, V.4
Wincker, P.5
Jubin, C.6
Delbac, F.7
Peyretaillade, E.8
Peyret, P.9
-
8
-
-
44149118881
-
Genome sequence surveys of Brachiola algerae and Edhazardia aedis reveal microsporidia with low gene densities
-
Williams, B. A. et al. Genome sequence surveys of Brachiola algerae and Edhazardia aedis reveal microsporidia with low gene densities. BMC Genomics 9, 200 (2008).
-
(2008)
BMC Genomics
, vol.9
, pp. 200
-
-
Williams, B.A.1
-
9
-
-
0035936144
-
Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi
-
DOI 10.1038/35106579
-
Katinka, M. D. et al. Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi. Nature 414, 450-453 (2001). (Pubitemid 34173726)
-
(2001)
Nature
, vol.414
, Issue.6862
, pp. 450-453
-
-
Katinka, M.D.1
Duprat, S.2
Cornillott, E.3
Metenler, G.4
Thomarat, F.5
Prensier, G.6
Barbe, V.7
Peyretaillade, E.8
Brottier, P.9
Wincker, P.10
Delbac, F.11
El Alaoul, H.12
Peyret, P.13
Saurin, W.14
Gouy, M.15
Weissenbach, J.16
Vivares, C.P.17
-
10
-
-
84856489199
-
The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis
-
Corradi, N., Pombert, J. F., Farinelli, L., Didier, E. S. & Keeling, P. J. The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis. Nat Commun. 1, 77 (2010).
-
(2010)
Nat Commun.
, vol.1
, pp. 77
-
-
Corradi, N.1
Pombert, J.F.2
Farinelli, L.3
Didier, E.S.4
Keeling, P.J.5
-
11
-
-
59249083056
-
Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi
-
Akiyoshi, D. E. et al. Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi. PLoS Pathog. 5, e1000261 (2009).
-
(2009)
PLoS Pathog
, vol.5
-
-
Akiyoshi, D.E.1
-
12
-
-
77957336940
-
The reduced genome of the parasitic microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism
-
Keeling, P. J. et al. The reduced genome of the parasitic microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism. Genome Biol. Evol. 2, 304-309 (2010).
-
(2010)
Genome Biol. Evol.
, vol.2
, pp. 304-309
-
-
Keeling, P.J.1
-
13
-
-
67650930861
-
Genomic analyses of the microsporidian Nosema ceranae, an emergent pathogen of honey bees
-
Cornman, R. S. et al. Genomic analyses of the microsporidian Nosema ceranae, an emergent pathogen of honey bees. PLoS Pathog 5, e1000466 (2009).
-
(2009)
PLoS Pathog
, vol.5
-
-
Cornman, R.S.1
-
14
-
-
75349085888
-
Draf genome sequence of the Daphnia pathogen Octosporea bayeri: Insights into the gene content of a large microsporidian genome and a model for host-parasite interactions
-
Corradi, N., Haag, K. L., Pombert, J. F., Ebert, D. & Keeling, P. J. Draf genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions. Genome Biol. 10, R106 (2009).
-
(2009)
Genome Biol
, vol.10
-
-
Corradi, N.1
Haag, K.L.2
Pombert, J.F.3
Ebert, D.4
Keeling, P.J.5
-
15
-
-
84864505769
-
Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites
-
Pombert, J. F. et al. Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites. Proc. Natl Acad. Sci. USA 109, 12638-12643 (2012).
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
, pp. 12638-12643
-
-
Pombert, J.F.1
-
16
-
-
84869426527
-
Microsporidian genome analysis reveals evolutionary strategies for obligate intracellular growth
-
doi:gr.142802.112 [pii].1101/gr.142802.112
-
Cuomo, C. A. et al. Microsporidian genome analysis reveals evolutionary strategies for obligate intracellular growth. Genome Res. doi:gr.142802.112 [pii].1101/gr.142802.112 (2012).
-
(2012)
Genome Res
-
-
Cuomo, C.A.1
-
17
-
-
37249005195
-
Steady progress and recent breakthroughs in the accuracy of automated genome annotation
-
DOI 10.1038/nrg2220, PII NRG2220
-
Brent, M. R. Steady progress and recent breakthroughs in the accuracy of automated genome annotation. Nat Rev. Genet. 9, 62-73 (2008). (Pubitemid 350277298)
-
(2008)
Nature Reviews Genetics
, vol.9
, Issue.1
, pp. 62-73
-
-
Brent, M.R.1
-
18
-
-
33645897982
-
Comparative genomics as a tool for gene discovery
-
Windsor, A. J. & Mitchell-Olds, T. Comparative genomics as a tool for gene discovery Curr. Opin. Biotechnol. 17, 161-167 (2006).
-
(2006)
Curr. Opin. Biotechnol.
, vol.17
, pp. 161-167
-
-
Windsor, A.J.1
Mitchell-Olds, T.2
-
19
-
-
2942544417
-
Gene fnding in novel genomes
-
Korf, I. Gene fnding in novel genomes. BMC Bioinform. 5, 59 (2004).
-
(2004)
BMC Bioinform.
, vol.5
, pp. 59
-
-
Korf, I.1
-
20
-
-
11944260600
-
Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes
-
DOI 10.1007/s00239-004-2673-0
-
Tomarat, F., Vivares, C. P. & Gouy, M. Phylogenetic analysis of the complete genome sequence of Encephalitozoon cuniculi supports the fungal origin of microsporidia and reveals a high frequency of fast-evolving genes. J. Mol. Evol. 59, 780-791 (2004). (Pubitemid 40100874)
-
(2004)
Journal of Molecular Evolution
, vol.59
, Issue.6
, pp. 780-791
-
-
Thomarat, F.1
Vivares, C.P.2
Gouy, M.3
-
21
-
-
2942521197
-
Recent advances in gene structure prediction
-
DOI 10.1016/j.sbi.2004.05.007, PII S0959440X04000818
-
Brent, M. R. & Guigo, R. Recent advances in gene structure prediction. Curr. Opin. Struct Biol. 14, 264-272 (2004). (Pubitemid 38749053)
-
(2004)
Current Opinion in Structural Biology
, vol.14
, Issue.3
, pp. 264-272
-
-
Brent, M.R.1
Guigo, R.2
-
22
-
-
29144453390
-
Gene identification in novel eukaryotic genomes by self-training algorithm
-
DOI 10.1093/nar/gki937
-
Lomsadze, A., Ter-Hovhannisyan, V., Chernof, Y. O. & Borodovsky, M. Gene identifcation in novel eukaryotic genomes by self-training algorithm. Nucleic Acids Res. 33, 6494-6506 (2005). (Pubitemid 41806413)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.20
, pp. 6494-6506
-
-
Lomsadze, A.1
Ter-Hovhannisyan, V.2
Chernoff, Y.O.3
Borodovsky, M.4
-
23
-
-
34547732966
-
Applying negative rule mining to improve genome annotation
-
Artamonova, I. I., Frishman, G. & Frishman, D. Applying negative rule mining to improve genome annotation. BMC Bioinform. 8, 261 (2007).
-
(2007)
BMC Bioinform.
, vol.8
, pp. 261
-
-
Artamonova, I.I.1
Frishman, G.2
Frishman, D.3
-
24
-
-
74049122005
-
Identifcation of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: Support for accurate structural genome annotation
-
Peyretaillade, E. et al. Identifcation of transcriptional signals in Encephalitozoon cuniculi widespread among Microsporidia phylum: support for accurate structural genome annotation. BMC Genomics 10, 607 (2009).
-
(2009)
BMC Genomics
, vol.10
, pp. 607
-
-
Peyretaillade, E.1
-
25
-
-
79959939048
-
Extreme reduction and compaction of microsporidian genomes
-
Peyretaillade, E. et al. Extreme reduction and compaction of microsporidian genomes. Res. Microbiol. 162, 598-606 (2011).
-
(2011)
Res. Microbiol.
, vol.162
, pp. 598-606
-
-
Peyretaillade, E.1
-
26
-
-
77955953162
-
Constrained intron structures in a microsporidian
-
Lee, R. C., Gill, E. E., Roy, S. W. & Fast, N. M. Constrained intron structures in a microsporidian. Mol. Biol Evol. 27, 1979-1982 (2010).
-
(2010)
Mol. Biol Evol.
, vol.27
, pp. 1979-1982
-
-
Lee, R.C.1
Gill, E.E.2
Roy, S.W.3
Fast, N.M.4
-
27
-
-
0031259208
-
Genes coding for reverse transcriptase, DNA-directed RNA polymerase, and chitin synthase from the microsporidian Spraguea lophii
-
Hinkle, G., Morrison, H. G. & Sogin, M. L. Genes coding for reverse transcriptase, DNA-directed RNA polymerase, and chitin synthase from the microsporidian Spraguea lophii. Biol. Bull. 193, 250-251 (1997). (Pubitemid 27526464)
-
(1997)
Biological Bulletin
, vol.193
, Issue.2
, pp. 250-251
-
-
Hinkle, G.1
Morrison, H.G.2
Sogin, M.L.3
-
28
-
-
0036710930
-
Sequence survey of the genome of the opportunistic microsporidian pathogen, Vittaforma corneae
-
Mittleider, D. et al. Sequence survey of the genome of the opportunistic microsporidian pathogen, Vittaforma corneae. J. Eukaryot. Microbiol. 49, 393-401 (2002). (Pubitemid 35259068)
-
(2002)
Journal of Eukaryotic Microbiology
, vol.49
, Issue.5
, pp. 393-401
-
-
Mittleider, D.1
Green, L.C.2
Mann, V.H.3
Michael, S.F.4
Didier, E.S.5
Brindley, P.J.6
-
29
-
-
33746712314
-
The varying microsporidian genome: Existence of long-terminal repeat retrotransposon in domesticated silkworm parasite Nosema bombycis
-
DOI 10.1016/j.ijpara.2006.04.010, PII S0020751906001524
-
Xu, J. et al. The varying microsporidian genome: existence of long-terminal repeat retrotransposon in domesticated silkworm parasite Nosema bombycis. Int. J. Parasitol. 36, 1049-1056 (2006). (Pubitemid 44164330)
-
(2006)
International Journal for Parasitology
, vol.36
, Issue.9
, pp. 1049-1056
-
-
Xu, J.1
Pan, G.2
Fang, L.3
Li, J.4
Tian, X.5
Li, T.6
Zhou, Z.7
Xiang, Z.8
-
30
-
-
47749122176
-
ESTs from the microsporidian Edhazardia aedis
-
Gill, E. E., Becnel, J. J. & Fast, N. M. ESTs from the microsporidian Edhazardia aedis. BMC Genomics 9, 296 (2008).
-
(2008)
BMC Genomics
, vol.9
, pp. 296
-
-
Gill, E.E.1
Becnel, J.J.2
Fast, N.M.3
-
31
-
-
72049097647
-
Identifcation of NbME MITE families: Potential molecular markers in the microsporidia Nosema bombycis
-
Xu, J. et al. Identifcation of NbME MITE families: potential molecular markers in the microsporidia Nosema bombycis. J. Invertebr. Pathol. 103, 48-52 (2010).
-
(2010)
J. Invertebr. Pathol.
, vol.103
, pp. 48-52
-
-
Xu, J.1
-
32
-
-
67849122320
-
MEME SUITE: Tools for motif discovery and searching
-
Bailey, T. L. et al. MEME SUITE: tools for motif discovery and searching. Nucleic Acids Res. 37, W202-208 (2009).
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Bailey, T.L.1
-
33
-
-
33745711863
-
Proteomic analysis of the eukaryotic parasite Encephalitozoon cuniculi (microsporidia): A reference map for proteins expressed in late sporogonial stages
-
DOI 10.1002/pmic.200500796
-
Brosson, D. et al. Proteomic analysis of the eukaryotic parasite Encephalitozoon cuniculi (microsporidia): a reference map for proteins expressed in late sporogonial stages. Proteomics 6, 3625-3635 (2006). (Pubitemid 44000190)
-
(2006)
Proteomics
, vol.6
, Issue.12
, pp. 3625-3635
-
-
Brosson, D.1
Kuhn, L.2
Delbac, F.3
Garin, J.4
Vivares, C.P.5
Texier, C.6
-
34
-
-
37649005250
-
Long-term evolution of transposable elements
-
Le Rouzic, A., Boutin, T. S. & Capy, P. Long-term evolution of transposable elements. Proc. Natl Acad. Sci. USA 104, 19375-19380 (2007).
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 19375-19380
-
-
Le Rouzic, A.1
Boutin, T.S.2
Capy, P.3
-
35
-
-
1942473174
-
Transfer of Nosema locustae (Microsporidia) to Antonospora locustae n. comb. based on molecular and ultrastructural data
-
DOI 10.1111/j.1550-7408.2004.tb00547.x
-
Slamovits, C. H., Williams, B. A. & Keeling, P. J. Transfer of Nosema locustae (Microsporidia) to Antonospora locustae n. comb. based on molecular and ultrastructural data. J. Eukaryot. Microbiol. 51, 207-213 (2004). (Pubitemid 38503859)
-
(2004)
Journal of Eukaryotic Microbiology
, vol.51
, Issue.2
, pp. 207-213
-
-
Slamovits, C.H.1
Williams, B.A.P.2
Keeling, P.J.3
-
36
-
-
78650122420
-
Genome expansion and gene loss in powdery mildew fungi reveal tradeofs in extreme parasitism
-
Spanu, P. D. et al. Genome expansion and gene loss in powdery mildew fungi reveal tradeofs in extreme parasitism. Science 330, 1543-1546 (2010).
-
(2010)
Science
, vol.330
, pp. 1543-1546
-
-
Spanu, P.D.1
-
37
-
-
84861182813
-
Genome evolution in flamentous plant pathogens: Why bigger can be better
-
Rafaele, S. & Kamoun, S. Genome evolution in flamentous plant pathogens: why bigger can be better. Nat Rev. Microbiol. 10, 417-430 (2012).
-
(2012)
Nat Rev. Microbiol.
, vol.10
, pp. 417-430
-
-
Rafaele, S.1
Kamoun, S.2
-
38
-
-
23944490133
-
Microsporidian polar tube proteins: Highly divergent but closely linked genes encode PTP1 and PTP2 in members of the evolutionarily distant Antonospora and Encephalitozoon groups
-
DOI 10.1016/j.fgb.2005.05.005, PII S1087184505000824
-
Polonais, V., Prensier, G., Metenier, G., Vivares, C. P. & Delbac, F. Microsporidian polar tube proteins: highly divergent but closely linked genes encode PTP1 and PTP2 in members of the evolutionarily distant Antonospora and Encephalitozoon groups. Fungal Genet Biol. 42, 791-803 (2005). (Pubitemid 41188176)
-
(2005)
Fungal Genetics and Biology
, vol.42
, Issue.9
, pp. 791-803
-
-
Polonais, V.1
Prensier, G.2
Metenier, G.3
Vivares, C.P.4
Delbac, F.5
-
39
-
-
0037131560
-
Nutrient-regulated protein kinases in budding yeast
-
DOI 10.1016/S0092-8674(02)01043-7
-
Wilson, W. A. & Roach, P. J. Nutrient-regulated protein kinases in budding yeast. Cell 111, 155-158 (2002). (Pubitemid 35292435)
-
(2002)
Cell
, vol.111
, Issue.2
, pp. 155-158
-
-
Wilson, W.A.1
Roach, P.J.2
-
40
-
-
2942714921
-
Parasite-specific eIF2 (eukaryotic initiation factor-2) kinase required for stress-induced translation control
-
DOI 10.1042/BJ20040262
-
Sullivan, W. J. Jr., Narasimhan, J., Bhatti, M. M. & Wek, R. C. Parasite-specifc eIF2 (eukaryotic initiation factor-2) kinase required for stress-induced translation control. Biochem. J. 380, 523-531 (2004). (Pubitemid 38788125)
-
(2004)
Biochemical Journal
, vol.380
, Issue.2
, pp. 523-531
-
-
Sullivan Jr., W.J.1
Narasimhan, J.2
Bhatti, M.M.3
Wek, R.C.4
-
41
-
-
36849092889
-
Novel membrane-bound eIF2α kinase in the flagellar pocket of Trypanosoma brucei
-
DOI 10.1128/EC.00249-07
-
Moraes, M. C. et al. Novel membrane-bound eIF2alpha kinase in the fagellar pocket of Trypanosoma brucei. Eukaryot Cell 6, 1979-1991 (2007). (Pubitemid 350221266)
-
(2007)
Eukaryotic Cell
, vol.6
, Issue.11
, pp. 1979-1991
-
-
Moraes, M.C.S.1
Jesus, T.C.L.2
Hashimoto, N.N.3
Dey, M.4
Schwartz, K.J.5
Alves, V.S.6
Avila, C.C.7
Bangs, J.D.8
Dever, T.E.9
Schenkman, S.10
Castilho, B.A.11
-
42
-
-
66149109088
-
PfeIK1, a eukaryotic initiation factor 2alpha kinase of the human malaria parasite Plasmodium falciparum, regulates stress-response to amino-acid starvation
-
Fennell, C. et al. PfeIK1, a eukaryotic initiation factor 2alpha kinase of the human malaria parasite Plasmodium falciparum, regulates stress-response to amino-acid starvation. Malar. J. 8, 99 (2009).
-
(2009)
Malar. J.
, vol.8
, pp. 99
-
-
Fennell, C.1
-
43
-
-
78649656028
-
Regulation of cross-talk in yeast MAPK signaling pathways
-
Saito, H. Regulation of cross-talk in yeast MAPK signaling pathways. Curr. Opin. Microbiol. 13, 677-683 (2010).
-
(2010)
Curr. Opin. Microbiol.
, vol.13
, pp. 677-683
-
-
Saito, H.1
-
44
-
-
79960914943
-
Ste20-related kinases: Efectors of signaling and morphogenesis in fungi
-
Boyce, K. J. & Andrianopoulos, A. Ste20-related kinases: efectors of signaling and morphogenesis in fungi. Trends Microbiol. 19, 400-410 (2011).
-
(2011)
Trends Microbiol
, vol.19
, pp. 400-410
-
-
Boyce, K.J.1
Andrianopoulos, A.2
-
45
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
Altschul, S. F. et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402 (1997). (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
46
-
-
23844525077
-
Repbase Update, a database of eukaryotic repetitive elements
-
DOI 10.1159/000084979
-
Jurka, J. et al. Repbase Update, a database of eukaryotic repetitive elements. Cytogenet Genome Res. 110, 462-467 (2005). (Pubitemid 41159923)
-
(2005)
Cytogenetic and Genome Research
, vol.110
, Issue.1-4
, pp. 462-467
-
-
Jurka, J.1
Kapitonov, V.V.2
Pavlicek, A.3
Klonowski, P.4
Kohany, O.5
Walichiewicz, J.6
-
47
-
-
0030854739
-
TRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
DOI 10.1093/nar/25.5.955
-
Lowe, T. M. & Eddy, S. R. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25, 955-964 (1997). (Pubitemid 27298263)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.5
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
49
-
-
58149203231
-
InterPro: The integrative protein signature database
-
Hunter, S. et al. InterPro: the integrative protein signature database. Nucleic Acids Res. 37, D211-215 (2009).
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Hunter, S.1
-
50
-
-
80053345905
-
SignalP 4.0: Discriminating signal peptides from transmembrane regions
-
Petersen, T. N., Brunak, S., von Heijne, G. & Nielsen, H. SignalP 4.0: discriminating signal peptides from transmembrane regions. Nat Methods 8, 785-786 (2011).
-
(2011)
Nat Methods
, vol.8
, pp. 785-786
-
-
Petersen, T.N.1
Brunak, S.2
Von Heijne, G.3
Nielsen, H.4
-
51
-
-
0034786532
-
The HMMTOP transmembrane topology prediction server
-
Tusnady, G. E. & Simon, I. The HMMTOP transmembrane topology prediction server. Bioinformatics 17, 849-850 (2001). (Pubitemid 32970487)
-
(2001)
Bioinformatics
, vol.17
, Issue.9
, pp. 849-850
-
-
Tusnady, G.E.1
Simon, I.2
-
52
-
-
0032972509
-
PSORT: A program for detecting sorting signals in proteins and predicting their subcellular localization
-
Nakai, K. & Horton, P. PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization. Trends Biochem. Sci. 24, 34-36 (1999).
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 34-36
-
-
Nakai, K.1
Horton, P.2
-
53
-
-
0033600935
-
Prediction of potential GPI-modification sites in proprotein sequences
-
DOI 10.1006/jmbi.1999.3069
-
Eisenhaber, B., Bork, P. & Eisenhaber, F. Prediction of potential GPI-modifcation sites in proprotein sequences. J. Mol. Biol. 292, 741-758 (1999). (Pubitemid 29457333)
-
(1999)
Journal of Molecular Biology
, vol.292
, Issue.3
, pp. 741-758
-
-
Eisenhaber, B.1
Bork, P.2
Eisenhaber, F.3
-
54
-
-
2942564436
-
N-terminal myristoylation predictions by ensembles of neural networks
-
DOI 10.1002/pmic.200300783
-
Bologna, G., Yvon, C., Duvaud, S. & Veuthey, A. L. N-Terminal myristoylation predictions by ensembles of neural networks. Proteomics 4, 1626-1632 (2004). (Pubitemid 38738321)
-
(2004)
Proteomics
, vol.4
, Issue.6
, pp. 1626-1632
-
-
Bologna, G.1
Yvon, C.2
Duvaud, S.3
Veuthey, A.-L.4
-
55
-
-
54249148026
-
CSS-Palm 2.0: An updated sofware for palmitoylation sites prediction
-
Ren, J. et al. CSS-Palm 2.0: an updated sofware for palmitoylation sites prediction. Protein Eng Des Sel 21, 639-644 (2008).
-
(2008)
Protein Eng des Sel
, vol.21
, pp. 639-644
-
-
Ren, J.1
-
56
-
-
33646366606
-
Refnement and prediction of protein prenylation motifs
-
Maurer-Stroh, S. & Eisenhaber, F. Refnement and prediction of protein prenylation motifs. Genome Biol 6, R55 (2005).
-
(2005)
Genome Biol
, vol.6
-
-
Maurer-Stroh, S.1
Eisenhaber, F.2
-
57
-
-
58149193245
-
Kinomer v. 1.0: A database of systematically classifed eukaryotic protein kinases
-
Martin, D. M., Miranda-Saavedra, D. & Barton, G. J. Kinomer v. 1.0: a database of systematically classifed eukaryotic protein kinases. Nucleic Acids Res. 37, D244-250 (2009).
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Martin, D.M.1
Miranda-Saavedra, D.2
Barton, G.J.3
-
58
-
-
33846040629
-
TransportDB: A comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels
-
DOI 10.1093/nar/gkl925
-
Ren, Q., Chen, K. & Paulsen, I. T. TransportDB: a comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels. Nucleic Acids Res. 35, D274-279 (2007). (Pubitemid 46056214)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.SUPPL. 1
-
-
Ren, Q.1
Chen, K.2
Paulsen, I.T.3
-
59
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar, R. C. Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26, 2460-2461 (2010).
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
|