Comparison of four molecular methods to type Salmonella Enteritidis strains

APMIS

Volumn 123, Issue 5, 2015, Pages 422-426

  Campioni, Fábio ^a   Pitondo Silva, André ^a   Bergamini, Alzira M M ^b   Falcão, Juliana P ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b INSTITUTO ADOLFO LUTZ   (Brazil)

Author keywords

ERIC PCR; MLST; MLVA; Molecular epidemiology; PFGE; Salmonella Enteritidis

Indexed keywords

ARTICLE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; COMPARATIVE STUDY; CONTROLLED STUDY; DNA DETERMINATION; GENETIC SIMILARITY; GENETIC VARIABILITY; MOLECULAR TYPING; MULTILOCUS SEQUENCE TYPING; NONHUMAN; PANDEMIC; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PULSED FIELD GEL ELECTROPHORESIS; SALMONELLA ENTERICA SEROVAR ENTERITIDIS; VARIABLE NUMBER OF TANDEM REPEAT; ANIMAL; BRAZIL; CHICKEN; CLASSIFICATION; EPIDEMIC; FOOD CONTROL; GENETICS; HUMAN; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR EPIDEMIOLOGY; PROCEDURES; SALMONELLA FOOD POISONING;

ANIMALS; BRAZIL; CHICKENS; ELECTROPHORESIS, GEL, PULSED-FIELD; EPIDEMICS; FOOD MICROBIOLOGY; HUMANS; MINISATELLITE REPEATS; MOLECULAR EPIDEMIOLOGY; MOLECULAR TYPING; MULTILOCUS SEQUENCE TYPING; POLYMERASE CHAIN REACTION; SALMONELLA ENTERITIDIS; SALMONELLA FOOD POISONING;

EID: 84928269685     PISSN: 09034641     EISSN: 16000463     Source Type: Journal    
DOI: 10.1111/apm.12367     Document Type: Article

References (30)

1. Boyle EC, Bishop JL, Grassl GA, Finlay BB. Salmonella: from pathogenesis to therapeutics. J Bacteriol 2007;189:1489-95.
2. Hendriksen RS, Vieira AR, Karlsmose S, Lo Fo Wong DM, Jensen AB, Wegener HC, et al. Global monitoring of Salmonella serovar distribution from the World Health Organization global foodborne infections network country data bank: results of quality assured laboratories from 2001 to 2007. Foodborne Pathog Dis 2011;8:887-900.
3. Majowicz SE, Musto J, Scallan E, Angulo FJ, Kirk M, O'Brien SJ, et al. The global burden of nontyphoidal Salmonella gastroenteritis. Clin Infect Dis 2010;50:882-9.
4. Olive DM, Bean P. Principles and applications of methods for DNA-based typing of microbial organisms. J Clin Microbiol 1999;37:1661-9.
5. Altekruse SF, Cohen ML, Swerdlow DL. Emerging foodborne diseases. Emerg Infect Dis 1997;3:285-93.
6. Humphrey T. Salmonella, stress responses and food safety. Nat Rev Microbiol 2004;2:504-9.
7. Mishu B, Koehler J, Lee LA, Rodrigue D, Brenner FH, Blake P, et al. Outbreaks of Salmonella enteritidis infections in the United States, 1985-1991. J Infect Dis 1994;169:547-52.
8. Olsen SJ, Bishop R, Brenner FW, Roels TH, Bean N, Tauxe RV, et al. The changing epidemiology of Salmonella: trends in serotypes isolated from humans in the United States, 1987-1997. J Infect Dis 2001;183:753-61.
9. Borrego JJ, Castro D, Jimenez-Notario M, Luque A, Martinez-Manzanares E, Rodriguez-Avial C, et al. Comparison of epidemiological markers of Salmonella strains isolated from different sources in Spain. J Clin Microbiol 1992;30:3058-64.
10. Chmielewski R, Wieliczko A, Kuczkowski M, Mazurkiewicz M, Ugorski M. Comparison of ITS profiling, REP- and ERIC-PCR of Salmonella Enteritidis isolates from Poland. J Vet Med B Infect Dis Vet Public Health 2002;49:163-8.
11. Threlfall EJ, Frost JA. The identification, typing and fingerprinting of Salmonella: laboratory aspects and epidemiological applications. J Appl Bacteriol 1990;68:5-16.
12. Wattiau P, Boland C, Bertrand S. Methodologies for Salmonella enterica subsp. enterica subtyping: gold standards and alternatives. Appl Environ Microbiol 2011;77:7877-85.
13. Achtman M, Wain J, Weill FX, Nair S, Zhou Z, Sangal V, et al. Multilocus sequence typing as a replacement for serotyping in Salmonella enterica. PLoS Pathog 2012;8:e1002776.
14. Aktas Z, Day M, Kayacan CB, Diren S, Threlfall EJ. Molecular characterization of Salmonella Typhimurium and Salmonella Enteritidis by plasmid analysis and pulsed-field gel electrophoresis. Int J Antimicrob Agents 2007;30:541-5.
15. Ammari S, Laglaoui A, En-nanei L, Bertrand S, Wildemauwe C, Barrijal S, et al. Characterization of Salmonella Enteritidis isolated from foods and patients in northern Morocco. J Infect Dev Ctries 2009;3:695-703.
16. Campioni F, Bergamini AMM, Falcão JP. Genetic diversity, virulence genes and antimicrobial resistance of Salmonella Enteritidis isolated from food and humans over a 24-year period in Brazil. Food Microbiol 2012;32:254-64.
17. Campioni F, Davis M, Medeiros MIC, Falcao JP, Shah DH. MLVA typing reveals higher genetic homogeneity among S. Enteritidis strains isolated from food, humans and chickens in Brazil in comparison to the North American Strains. Int J Food Microbiol 2013;162:174-81.
18. Campioni F, Zoldan MM, Falcão JP. Characterization of Salmonella Enteritidis strains isolated from poultry and farm environments in Brazil. Epidemiol Infect 2014;142:1-8.
19. Kottwitz LB, Scheffer MC, Dalla-Costa LM, Farah SM, Moscalewski WS, Magnani M, et al. Molecular characterization and resistance profile of Salmonella Enteritidis PT4 and PT9 strains isolated in Brazil. J Med Microbiol 2011;60:1026-31.
20. Malorny B, Junker E, Helmuth R. Multi-locus variable-number tandem repeat analysis for outbreak studies of Salmonella enterica serotype Enteritidis. BMC Microbiol 2008;8:84.
21. Millemann Y, Lesage-Descauses MC, Lafont JP, Chaslus-Dancla E. Comparison of random amplified polymorphic DNA analysis and enterobacterial repetitive intergenic consensus-PCR for epidemiological studies of Salmonella. FEMS Immunol Med Microbiol 1996;14:129-34.
22. Noda T, Murakami K, Asai T, Etoh Y, Ishihara T, Kuroki T, et al. Multi-locus sequence typing of Salmonella enterica subsp. enterica serovar Enteritidis strains in Japan between 1973 and 2004.Acta Vet Scand. 2011;53:38.
23. Oliveira SD, Bessa MC, Dos Santos LR, de Itapema Cardoso MR, Brandelli A, Canal CW. Phenotypic and genotypic characterization of Salmonella Enteritidis isolates. Brazilian Journal of Microbiology 2007;38:720-8.
24. Ridley AM, Threlfall EJ, Rowe B. Genotypic characterization of Salmonella enteritidis phage types by plasmid analysis, ribotyping, and pulsed-field gel electrophoresis. J Clin Microbiol 1998;36:2314-21.
25. Rivoal K, Protais J, Quéguiner S, Boscher E, Chidaine B, Rose V, et al. Use of pulsed-field gel electrophoresis to characterize the heterogeneity and clonality of Salmonella serotype Enteritidis, Typhimurium and Infantis isolates obtained from whole liquid eggs. Int J Food Microbiol 2009;129:180-6.
26. Shah DH, Zhou X, Addwebi T, Davis MA, Orfe L, Call DR, et al. Cell invasion of poultry-associated Salmonella enterica serovar Enteritidis isolates is associated with pathogenicity, motility and proteins secreted by the type III secretion system. Microbiology 2011;157:1428-45.
27. Shah DH, Zhou X, Addwebi T, Davis MA, Call DR. In vitro and in vivo pathogenicity of Salmonella enteritidis clinical strains isolated from North America. Arch Microbiol 2011;193:811-21.
28. Suh DK, Song JC. Analysis of Salmonella enterica serotype Enteritidis isolated from human and chickens by repetitive sequence-PCR fingerprinting, antibiotic resistance and plasmid profiles. J Vet Sci 2006;7:37-41.
29. Souza RA, Pitondo-Silva A, Falcão DP, Falcão JP. Evaluation of four molecular typing methodologies as tools for determining taxonomy relations and for identifying species among Yersinia isolates. J Microbiol Methods 2010;82:141-50.
30. Hyeon JY, Chon JW, Park JH, Kim MS, Oh YH, Choi IS, et al. A Comparison of subtyping methods for differentiating Salmonella enterica serovar Enteritidis isolates obtained from food and human sources. Osong Public Health Res Perspect 2013;4:27-33.