메뉴 건너뛰기




Volumn 24, Issue 11, 2014, Pages 1765-1773

RNA-seq of 272 gliomas revealed a novel, recurrent PTPRZ1-MET fusion transcript in secondary glioblastomas

(27)  Bao, Zhao Shi a,b,c   Chen, Hui Min d   Yang, Ming Yu d   Zhang, Chuan Bao a,b,c   Yu, Kai d   Ye, Wan Lu d   Hu, Bo Qiang d   Yan, Wei e   Zhang, Wei b,c   Akers, Johnny f   Ramakrishnan, Valya f   Li, Jie f   Carter, Bob f   Liu, Yan Wei a,b,c   Hu, Hui Min a   Wang, Zheng a,b,c   Li, Ming Yang a,b,c   Yao, Kun c,g   Qiu, Xiao Guang b,c   Kang, Chun Sheng c,h   more..


Author keywords

[No Author keywords available]

Indexed keywords

EPIDERMAL GROWTH FACTOR RECEPTOR; FIBROBLAST GROWTH FACTOR RECEPTOR 3; HYBRID PROTEIN; ISOCITRATE DEHYDROGENASE 1; PROTEIN; PTPRZ PROTEIN; RNF213 PROTEIN; SCATTER FACTOR RECEPTOR; SLC26A11 PROTEIN; TACC3 PROTEIN; UNCLASSIFIED DRUG; VASCULOTROPIN RECEPTOR; ALKYLATING AGENT; DACARBAZINE; MET PROTEIN, HUMAN; ONCOPROTEIN; PTPRZ1 PROTEIN, HUMAN; RECEPTOR LIKE PROTEIN TYROSINE PHOSPHATASE; TEMOZOLOMIDE;

EID: 84927166354     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.165126.113     Document Type: Article
Times cited : (326)

References (47)
  • 1
    • 84893519542 scopus 로고    scopus 로고
    • Molecular genetics of gliomas
    • Appin CL, Brat DJ. 2014. Molecular genetics of gliomas. Cancer J 20: 66-72.
    • (2014) Cancer J , vol.20 , pp. 66-72
    • Appin, C.L.1    Brat, D.J.2
  • 2
    • 0030681260 scopus 로고    scopus 로고
    • The significance of digital gene expression profiles
    • Audic SP, Claverie JM. 1997. The significance of digital gene expression profiles. Genome Res 7: 986-995.
    • (1997) Genome Res , vol.7 , pp. 986-995
    • Audic, S.P.1    Claverie, J.M.2
  • 3
    • 36949005417 scopus 로고    scopus 로고
    • DNA damage signalling guards against activated oncogenes and tumour progression
    • Bartek J, Bartkova J, Lukas J. 2007. DNA damage signalling guards against activated oncogenes and tumour progression. Oncogene 26: 7773-7779.
    • (2007) Oncogene , vol.26 , pp. 7773-7779
    • Bartek, J.1    Bartkova, J.2    Lukas, J.3
  • 7
    • 0038617619 scopus 로고    scopus 로고
    • Glioblastoma and cerebral microvascular endothelial cell migration in response to tumor-associated growth factors
    • Brockmann MA, Ulbricht U, Gruner K, Fillbrandt R, Westphal M, Lamszus K. 2003. Glioblastoma and cerebral microvascular endothelial cell migration in response to tumor-associated growth factors. Neurosurgery 52: 1391-1399.
    • (2003) Neurosurgery , vol.52 , pp. 1391-1399
    • Brockmann, M.A.1    Ulbricht, U.2    Gruner, K.3    Fillbrandt, R.4    Westphal, M.5    Lamszus, K.6
  • 8
    • 54549108740 scopus 로고    scopus 로고
    • Comprehensive genomic characterization defines human glioblastoma genes and core pathways
    • The Cancer Genome Atlas Research Network. 2008. Comprehensive genomic characterization defines human glioblastoma genes and core pathways. Nature 455: 1061-1068.
    • (2008) Nature , vol.455 , pp. 1061-1068
  • 9
    • 84856535081 scopus 로고    scopus 로고
    • Mutual exclusivity analysis identifies oncogenic network modules
    • Ciriello G, Cerami E, Sander C, Schultz N. 2012. Mutual exclusivity analysis identifies oncogenic network modules. Genome Res 22: 398-406.
    • (2012) Genome Res , vol.22 , pp. 398-406
    • Ciriello, G.1    Cerami, E.2    Sander, C.3    Schultz, N.4
  • 11
    • 18344372831 scopus 로고    scopus 로고
    • Cyclins and cdks in development and cancer: A perspective
    • Deshpande A, Sicinski P, Hinds PW. 2005. Cyclins and cdks in development and cancer: a perspective. Oncogene 24: 2909-2915.
    • (2005) Oncogene , vol.24 , pp. 2909-2915
    • Deshpande, A.1    Sicinski, P.2    Hinds, P.W.3
  • 12
    • 84870011791 scopus 로고    scopus 로고
    • Loss of receptor protein tyrosine phosphatase b/z (RPTPb/z) promotes prostate cancer metastasis
    • Diamantopoulou Z, Kitsou P, Menashi S, Courty J, Katsoris P. 2012. Loss of receptor protein tyrosine phosphatase b/z (RPTPb/z) promotes prostate cancer metastasis. J Biol Chem 287: 40339-40349.
    • (2012) J Biol Chem , vol.287 , pp. 40339-40349
    • Diamantopoulou, Z.1    Kitsou, P.2    Menashi, S.3    Courty, J.4    Katsoris, P.5
  • 13
    • 65249122512 scopus 로고    scopus 로고
    • Novel therapeutic inhibitors of the c-Met signaling pathway in cancer
    • Eder JP, Vande Woude GF, Boerner SA, LoRusso PM. 2009. Novel therapeutic inhibitors of the c-Met signaling pathway in cancer. Clin Cancer Res 15: 2207-2214.
    • (2009) Clin Cancer Res , vol.15 , pp. 2207-2214
    • Eder, J.P.1    Vande Woude, G.F.2    Boerner, S.A.3    Lorusso, P.M.4
  • 15
    • 84868295073 scopus 로고    scopus 로고
    • Reanalysis of RNA-sequencing data reveals several additional fusion genes with multiple isoforms
    • Kangaspeska S, Hultsch S, Edgren H, Nicorici D, Murumagi A, Kallioniemi O. 2012. Reanalysis of RNA-sequencing data reveals several additional fusion genes with multiple isoforms. PLoS ONE 7: e48745.
    • (2012) PLoS ONE , vol.7 , pp. e48745
    • Kangaspeska, S.1    Hultsch, S.2    Edgren, H.3    Nicorici, D.4    Murumagi, A.5    Kallioniemi, O.6
  • 16
    • 80051507403 scopus 로고    scopus 로고
    • TopHat-Fusion: An algorithm for discovery of novel fusion transcripts
    • Kim D, Salzberg SL. 2011. TopHat-Fusion: an algorithm for discovery of novel fusion transcripts. Genome Biol 12: R72.
    • (2011) Genome Biol , vol.12 , pp. R72
    • Kim, D.1    Salzberg, S.L.2
  • 17
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R. 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25: 1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 21
    • 84872778113 scopus 로고    scopus 로고
    • Receptor-type tyrosine phosphatase ligands: Looking for the needle in the haystack
    • Mohebiany AN, Nikolaienko RM, Bouyain S, Harroch S. 2013. Receptor-type tyrosine phosphatase ligands: looking for the needle in the haystack. FEBS J 280: 388-400.
    • (2013) FEBS J , vol.280 , pp. 388-400
    • Mohebiany, A.N.1    Nikolaienko, R.M.2    Bouyain, S.3    Harroch, S.4
  • 26
    • 84861697198 scopus 로고    scopus 로고
    • Genomic profiling of glioblastoma: Convergence of fundamental biologic tenets and novel insights
    • Ng K, Kim R, Kesari S, Carter B, Chen CC. 2012. Genomic profiling of glioblastoma: convergence of fundamental biologic tenets and novel insights. J Neurooncol 107: 1-12.
    • (2012) J Neurooncol , vol.107 , pp. 1-12
    • Ng, K.1    Kim, R.2    Kesari, S.3    Carter, B.4    Chen, C.C.5
  • 29
    • 70449711757 scopus 로고    scopus 로고
    • Genetic alterations and signaling pathways in the evolution of gliomas
    • Ohgaki H, Kleihues P. 2009. Genetic alterations and signaling pathways in the evolution of gliomas. Cancer Sci 100: 2235-2241.
    • (2009) Cancer Sci , vol.100 , pp. 2235-2241
    • Ohgaki, H.1    Kleihues, P.2
  • 30
    • 84997941720 scopus 로고    scopus 로고
    • An overview of the c-MET signaling pathway
    • Organ SL, Tsao MS. 2011. An overview of the c-MET signaling pathway. Ther Adv Med Oncol 3: S7-S19.
    • (2011) Ther Adv Med Oncol , vol.3 , pp. S7-S19
    • Organ, S.L.1    Tsao, M.S.2
  • 32
    • 14644425319 scopus 로고    scopus 로고
    • Mechanisms of BCR-ABL in the pathogenesis of chronic myelogenous leukaemia
    • Ren R. 2005. Mechanisms of BCR-ABL in the pathogenesis of chronic myelogenous leukaemia. Nat Rev Cancer 5: 172-183.
    • (2005) Nat Rev Cancer , vol.5 , pp. 172-183
    • Ren, R.1
  • 33
    • 84872446709 scopus 로고    scopus 로고
    • Methods for identifying higher-order chromatin structure
    • Sajan SA, Hawkins RD. 2012. Methods for identifying higher-order chromatin structure. Annu Rev Genomics Hum Genet 13: 59-82.
    • (2012) Annu Rev Genomics Hum Genet , vol.13 , pp. 59-82
    • Sajan, S.A.1    Hawkins, R.D.2
  • 34
    • 77953291664 scopus 로고    scopus 로고
    • The biology and treatment of EML4-ALK non-small cell lung cancer
    • Sasaki T, Rodig SJ, Chirieac LR, Janne PA. 2010. The biology and treatment of EML4-ALK non-small cell lung cancer. Eur J Cancer 46: 1773-1780.
    • (2010) Eur J Cancer , vol.46 , pp. 1773-1780
    • Sasaki, T.1    Rodig, S.J.2    Chirieac, L.R.3    Janne, P.A.4
  • 39
    • 80155191242 scopus 로고    scopus 로고
    • Oncogene addiction as a foundational rationale for targeted anti-cancer therapy: Promises and perils
    • Torti D, Trusolino L. 2011. Oncogene addiction as a foundational rationale for targeted anti-cancer therapy: promises and perils. EMBO Mol Med 3: 623-636.
    • (2011) EMBO Mol Med , vol.3 , pp. 623-636
    • Torti, D.1    Trusolino, L.2
  • 40
    • 73649123907 scopus 로고    scopus 로고
    • Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1
    • Verhaak RG, Hoadley KA, Purdom E, Wang V, Qi Y, Wilkerson MD, Miller CR, Ding L, Golub T, Mesirov JP, et al. 2010. Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1. Cancer Cell 17: 98-110.
    • (2010) Cancer Cell , vol.17 , pp. 98-110
    • Verhaak, R.G.1    Hoadley, K.A.2    Purdom, E.3    Wang, V.4    Qi, Y.5    Wilkerson, M.D.6    Miller, C.R.7    Ding, L.8    Golub, T.9    Mesirov, J.P.10
  • 41
    • 84873055344 scopus 로고    scopus 로고
    • MDM2, MDMX and p53 in oncogenesis and cancer therapy
    • Wade M, Li YC, Wahl GM. 2013. MDM2, MDMX and p53 in oncogenesis and cancer therapy. Nat Rev Cancer 13: 83-96.
    • (2013) Nat Rev Cancer , vol.13 , pp. 83-96
    • Wade, M.1    Li, Y.C.2    Wahl, G.M.3
  • 42
    • 84875368159 scopus 로고    scopus 로고
    • Understanding high grade glioma: Molecular mechanism, therapy and comprehensive management
    • Wang Y, Jiang T. 2013. Understanding high grade glioma: molecular mechanism, therapy and comprehensive management. Cancer Lett 331: 139-146.
    • (2013) Cancer Lett , vol.331 , pp. 139-146
    • Wang, Y.1    Jiang, T.2
  • 43
    • 0037025173 scopus 로고    scopus 로고
    • Cancer. Addiction to oncogenes - The Achilles heal of cancer
    • Weinstein IB. 2002. Cancer. Addiction to oncogenes-the Achilles heal of cancer. Science 297: 63-64.
    • (2002) Science , vol.297 , pp. 63-64
    • Weinstein, I.B.1
  • 44
    • 48249125791 scopus 로고    scopus 로고
    • Malignant gliomas in adults
    • Wen PY, Kesari S. 2008. Malignant gliomas in adults. N Engl J Med 359: 492-507.
    • (2008) N Engl J Med , vol.359 , pp. 492-507
    • Wen, P.Y.1    Kesari, S.2
  • 45
    • 25144521326 scopus 로고    scopus 로고
    • Met activation and receptor dimerization in cancer: A role for the Sema domain
    • Wickramasinghe D, Kong-Beltran M. 2005. Met activation and receptor dimerization in cancer: a role for the Sema domain. Cell Cycle 4: 683-685.
    • (2005) Cell Cycle , vol.4 , pp. 683-685
    • Wickramasinghe, D.1    Kong-Beltran, M.2
  • 47
    • 84873875257 scopus 로고    scopus 로고
    • Identification of a novel gene fusion RNF213-SLC26A11 in chronic myeloid leukemia by RNA-Seq
    • Zhou JB, Zhang T, Wang BF, Gao HZ, Xu X. 2013. Identification of a novel gene fusion RNF213-SLC26A11 in chronic myeloid leukemia by RNA-Seq. Mol Med Rep 7: 591-597.
    • (2013) Mol Med Rep , vol.7 , pp. 591-597
    • Zhou, J.B.1    Zhang, T.2    Wang, B.F.3    Gao, H.Z.4    Xu, X.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.