Reversed-phase fused-core HPLC modeling of peptides

Journal of Pharmaceutical Analysis

Volumn 3, Issue 2, 2013, Pages 93-101

  D'Hondt, Matthias ^a   Gevaert, Bert ^a   Stalmans, Sofie ^a   Van Dorpe, Sylvia ^a   Wynendaele, Evelien ^a   Peremans, Kathelijne ^a   Burvenich, Christian ^a   De Spiegeleer, Bart ^a  

^a GHENT UNIVERSITY   (Belgium)

Author keywords

In silico amino acid descriptor; Peptides; RP HPLC peptide retention model

Indexed keywords

ADRENOMEDULLIN; AMYLIN; DERMORPHIN; ENDOMORPHIN 1; ENDOMORPHIN 2; GHRELIN; GONADORELIN; KYOTORPHIN; METENKEPHALIN; NEUROPEPTIDE Y; OBESTATIN; OREXIN A; PEPTIDE; UROCORTIN II;

ACCURACY; ARTICLE; CHEMICAL BOND; COMPUTER MODEL; CONCENTRATION (PARAMETERS); FREEZE DRYING; REVERSED PHASE FUSED CORE HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; REVERSED PHASE HIGH PERFORMANCE LIQUID CHROMATOGRAPHY;

EID: 84925835445     PISSN: 20951779     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jpha.2012.11.002     Document Type: Article

References (60)

1. J. Ruta, D. Guillarme, and S. Rudaz Comparison of columns packed with porous sub-2 μm particles and superficially porous sub-3 μm particles for peptide analysis at ambient and high temperatures J. Sep. Sci. 33 2010 2465 2477
2. L.A. Riddle, and G. Guiochon Influence of mobile phase gradients on the retention and separation of peptides from a cytochrome-c digest by reversed-phase liquid chromatography Chromatographia 64 2006 121 127
3. K. Stulik, V. Pacakova, and J. Suchankova Stationary phases for peptide analysis by high performance liquid chromatography: a review Anal. Chim. Acta 352 1997 1 19
4. W.S. Hancock, C.A. Bishop, and R.L. Prestidge Reversed-phase, high-pressure liquid-chromatography of peptides and proteins with ion-pairing reagents Science 200 1978 1168 1170
5. W.S. Hancock, C.A. Bishop, and R.L. Prestidge High-pressure liquid-chromatography of peptides and proteins. Use of phosphoric-acid in analysis of un-derivatized pepetides by reversed-phase high-pressure liquid-chromatography J. Chromatogr. 153 1978 391 398
6. Y. Hsieh, C.J.G. Duncan, and J.-M. Brisson Fused-core silica column high-performance liquid chromatography/tandem mass spectrometric determination of rimonabant in mouse plasma Anal. Chem. 79 2007 5668 5673
7. B. De Spiegeleer, V. Vergote, and A. Pezeshki Impurity profiling quality control testing of synthetic peptides using liquid chromatography-photodiode array-fluorescence and liquid chromatography-electrospray ionization-mass spectrometry: the obestatin case Anal. Chem. 376 2008 229 234
8. J.J. van Deemter, F.J. Zuiderweg, and A. Klinkenberg Longitudinal diffusion and resistance to mass transfer as causes of nonideality in chromatography Chem. Eng. Sci. 5 1956 271 289
9. H.J. Issaq, K.C. Chan, and J. Blonder Separation, detection and quantitation of peptides by liquid chromatography and capillary electrochromatography J. Chromatogr. A 1216 2009 1825 1837
10. R.W. Brice, X. Zhang, and L.A. Colon Fused-core, sub-2 μm packings, and monolithic HPLC columns: a comparative evaluation J. Sep. Sci. 32 2009 2723 2731
11. J.J. Kirkland, T.J. Langlois, and J.J. DeStefano Fused core particles for HPLC columns Am. Lab. 39 2007 18 21
12. J.J. Kirkland Development of some stationary phases for reversed-phase high performance liquid chromatography J. Chromatogr. A 1060 2004 9 21
13. J.J. Kirkland, F.A. Truskowski, and R.D. Ricker Atypical silica-based column packings for high-performance liquid chromatography J. Chromatogr. A 965 2002 25 34
14. E.R. Badman, R.L. Beardsley, and Z. Liang Accelerating high quality bioanalytical LC/MS/MS assays using fused-core columns J. Chromatogr. B 878 2010 2307 2313
15. (TM)) column in practice, applied for small and large molecule separation J. Pharmaceut. Biomed. 54 2011 482 490
16. E. Olah, S. Fekete, and J. Fekete Comparative study of new shell-type, sub-2 μm fully porous and monolith stationary phases, focusing on mass-transfer resistance J. Chromatogr. A 1217 2010 3642 3653
17. A. Vaast, K. Broeckhoven, and S. Dolman Comparison of the gradient kinetic performance of silica monolithic capillary columns with columns packed with 3 μm porous and 2.7 μm fused-core silica particles J. Chromatogr. A 1228 2011 270 275
18. F. Gritti, and G. Guiochon Comparison between the loading capacities of columns packed with partially and totally porous fine particles what is the effective surface area available for adsorption? J. Chromatogr. A 1169 2007 125 138
19. S. Fekete, J. Fekete, and K. Ganzler Shell and small particles: evaluation of new column technology J. Pharm. Biomed. 49 2009 64 71
20. K. Kaczmarski, and G. Guiochon Modeling of the mass-transfer kinetics in chromatographic columns packed with shell and pellicular particles Anal. Chem. 79 2007 4648 4656
21. F. Gritti, A. Cavazzini, and N. Marchetti Comparison between the efficiencies of columns packed with fully and partially porous C-18-bound silica materials J. Chromatogr. A 1157 2007 289 303
22. J.J. Salisbury Fused-core particles: a practical alternative to sub-2 μm particles J. Chromatogr. Sci 46 2008 883 886
23. W. Song, D. Pabbisetty, and E.A. Groeber Comparison of fused-core and conventional particle size columns by LC-MS/MS and UV: application to pharmacokinetic study J. Pharm. Biomed. 50 2009 491 500
24. Y. Zhang, X. Wang, and P. Mukherjee Critical comparison of performances of superficially porous particles and sub-2 μm particles under optimized ultra-high pressure conditions J. Chromatogr. A 1216 2009 4597 4605
25. J. Zheng, D. Patel, and Q. Tang Comparison study of porous, fused-core, and monolithic silica-based C(18) HPLC columns for celestoderm-V ointment J. Pharm. Biomed. 50 2009 815 822
26. A.J. Alexander, and L. Ma Comprehensive two-dimensional liquid chromatography separations of pharmaceutical samples using dual fused-core columns in the 2nd dimension J. Chromatogr. A 1216 2009 1338 1345
27. X. Li, D.R. Stoll, and P.W. Carr Equation for peak capacity estimation in two-dimensional liquid chromatography Anal. Chem. 81 2009 845 850
28. D.R. Stoll, X. Li, and X. Wang Fast, comprehensive two-dimensional liquid chromatography J. Chromatogr. A 1168 2007 3 43
29. J.N. Fairchild, K. Horvath, and G. Guiochon Approaches to comprehensive multidimensional liquid chromatography systems J. Chromatogr. A 1216 2009 1363 1371
30. P. Jandera, T. Hajek, and P. Cesla Effects of the gradient profile, sample volume and solvent on the separation in very fast gradients, with special attention to the second-dimension gradient in comprehensive two-dimensional liquid chromatography J. Chromatogr. A 1218 2011 1995 2006
31. N. Marchetti, A. Cavazzini, and F. Gritti Gradient elution separation and peak capacity of columns packed with porous shell particles J. Chromatogr. A 1163 2007 203 211
32. J. Ruta, D. Zurlino, and C. Grivel Evaluation of columns packed with shell particles with compounds of pharmaceutical interest J. Chromatogr. A 1228 2011 221 231
33. A. Staub, D. Zurlino, and S. Rudaz Analysis of peptides and proteins using sub-2 μm fully porous and sub-3 μm shell particles J. Chromatogr. A 1218 2011 8903 8914
34. S.A. Schuster, B.M. Wagner, and B.E. Boyes Wider pore superficially porous particles for peptide separations by HPLC J. Chromatogr. Sci. 48 2010 566 571
35. M. D'Hondt, W. Demaré, and S. Van Dorpe Dry heat stress stability evaluation of casein peptide mixture Food Chem. 128 2011 114 122
36. S.A. Schuster, B.E. Boyes, and B.M. Wagner Fast high performance liquid chromatography separations for proteomic applications using fused-core(r) silica particles J. Chromatogr. A 1228 2012 232 241
37. R.-I. Chirita, C. West, and A.-L. Finaru Approach to hydrophilic interaction chromatography column selection: application to neurotransmitters analysis J. Chromatogr. A 1217 2010 3091 3104
38. Y. Chen, C.T. Mant, and R.S. Hodges Selectivity differences in the separation of amphipathic α-helical peptides during reversed-phase liquid chromatography at pHs 2.0 and 7.0. Effects of different packings, mobile phase conditions and temperature J. Chromatogr. A 1043 2004 99 111
39. J. Barbosa, I. Toro, and R. Berges Retention behavior of peptides, quinolones, diuretics and peptide hormones in liquid chromatography. Influence of ionic strength and pH on chromatographic retention J. Chromatogr. A 915 2001 85 96
40. V. Sanz-Nebot, I. Toro, and J. Barbosa Separation of potentially therapeutic peptide hormones by liquid chromatography. Optimisation of composition and pH of the mobile phase J. Chromatogr. A 870 2000 335 347
41. S. Espinosa, E. Bosch, and M. Roses Change of mobile phase pH during gradient reversed-phase chromatography with 2,2,2-trifluoroethanol-water as mobile phase and its effect on the chromatographic hydrophobicity index determination J. Chromatogr. A 954 2002 77 87
42. S. Van Dorpe, A. Bronselaer, and J. Nielandt Brainpeps: the blood-brain barrier peptide database Brain Struct. Funct. 217 2011 687 718
43. A. Pezeshki, V. Vergote, and S. Van Dorpe Adsorption of peptides at the sample drying step: influence of solvent evaporation technique, vial material and solution additive J. Pharm. Biomed. 49 2009 607 612
44. S. Van Dorpe, V. Vergote, and A. Pezeshki Hydrophilic interaction LC of peptides: columns comparison and clustering J. Sep. Sci. 33 2010 728 739
45. K. Bodzioch, T. Baczek, and R. Kaliszan The molecular descriptor log Sum(AA) and its alternatives in QSPR models to predict the retention of peptides J. Pharm. Biomed. 50 2009 563 569
46. K. Bodzioch, A. Durand, and R. Kaliszan Advanced QSPR modeling of peptides behavior in RPLC Talanta 81 2010 1711 1718
47. T. Baczek, C. Temporini, and E. Perani Identification of peptides in proteomics supported by prediction of peptide retention by means of quantitative structure-retention relationships Acta Chromatogr. 18 2007 72 92
48. T. Baczek, P. Wiczling, and M. Marszall Prediction of peptide retention at different HPLC conditions from multiple lineair regression J. Proteome Res. 4 2005 555 563
49. R. Kaliszan, T. Baczek, and A. Cimochowska Prediction of high-performance liquid chromatography retention of peptides with the use of quantitative structure-retention relationships Proteomics 5 2005 409 415
50. M. Michel, T. Baczek, and S. Studzinska Comparative evaluation of high-performance liquid chromatography stationary phases used for the separation of peptides in terms of quantitative structure-retention relationships J. Chromatogr. A 1175 2007 49 54
51. R. Kaliszan QSPR: quantitative structure-chromatographic-retention relationships Chem. Rev. 107 2007 3212 3246
52. H. Du, H. Wang, and X. Zhang Prediction of retention times of peptides in RPLC by using radial basis function neural networks and projection pursuit regression Chemometr. Intell. Lab. Syst. 92 2008 92 99
53. Y.X. Chen, C.T. Mant, and R.S. Hodges Temperature selectivity effects in reversed-phase liquid chromatography due to conformation differences between helical and non-helical peptides J. Chromatogr. A 1010 2003 45 61
54. J.M. Cunliffe, and T.D. Maloney Fused-core particle technology as an alternative to sub-2-alpha m particles to achieve high separation efficiency with low backpressure J. Sep. Sci 30 2007 3104 3109
55. P. Donato, P. Dugo, and F. Cacciola High peak capacity separation of peptides through the serial connection of LC shell-packed columns J. Sep. Sci 32 2009 1129 1136
56. M. D'Hondt, E. Vangheluwe, and S. Van Dorpe Stability of extemporaneously prepared cytarabine, methotrexate sodium, and methylprednisolone sodium succinate Am. J. Health-Syst. Pharm. 69 2012 232 240
57. A.J. Alpert Hydrophilic-interaction chromatography for the separation of peptides, nucleic-acids and other polar compounds J. Chromatogr. 499 1990 177 196
58. M. Shibue, C. Mant, and R. Hodges Effect of anionic ion-pairing reagent hydrophobicity on selectivity of peptide separations by reversed-phase liquid chromatography J. Chromatogr. A 1080 2005 68 75
59. R. Todeschini, and V. Consonni Handbook of Molecular Descriptors 2001 Wiley-VCH Weinheim
60. M. Sandberg, L. Eriksson, and J. Jonsson New chemical descriptors relevant for the design of biologically active peptides. A multivariate characterization of 87 amino acids J. Med. Chem 41 1998 2481 2491