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Volumn 57, Issue 6, 2015, Pages 971-983

The Methyl-CpG-Binding Protein MBD7 Facilitates Active DNA Demethylation to Limit DNA Hyper-Methylation and Transcriptional Gene Silencing

Author keywords

[No Author keywords available]

Indexed keywords

DNA; GENOMIC DNA; HYGROMYCIN; IDM1 PROTEIN; IDM2 PROTEIN; IDM3 PROTEIN; KANAMYCIN; MBD7 PROTEIN; MESYLIC ACID ETHYL ESTER; UNCLASSIFIED DRUG; VEGETABLE PROTEIN; ARABIDOPSIS PROTEIN; DNA BINDING PROTEIN; HISTONE ACETYLTRANSFERASE; IDM1 PROTEIN, ARABIDOPSIS; IDM2 PROTEIN, ARABIDOPSIS; MBD7 PROTEIN, ARABIDOPSIS; NUCLEAR PROTEIN; ROS1 PROTEIN, ARABIDOPSIS;

EID: 84925261224     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2015.01.009     Document Type: Article
Times cited : (109)

References (33)
  • 2
    • 84876278080 scopus 로고    scopus 로고
    • Methylation-dependent and -independent genomic targeting principles of the MBD protein family
    • Baubec T., Ivánek R., Lienert F., Schübeler D. Methylation-dependent and -independent genomic targeting principles of the MBD protein family. Cell 2013, 153:480-492.
    • (2013) Cell , vol.153 , pp. 480-492
    • Baubec, T.1    Ivánek, R.2    Lienert, F.3    Schübeler, D.4
  • 3
    • 84899743736 scopus 로고    scopus 로고
    • The contributions of transposable elements to the structure, function, and evolution of plant genomes
    • Bennetzen J.L., Wang H. The contributions of transposable elements to the structure, function, and evolution of plant genomes. Annu. Rev. Plant Biol. 2014, 65:505-530.
    • (2014) Annu. Rev. Plant Biol. , vol.65 , pp. 505-530
    • Bennetzen, J.L.1    Wang, H.2
  • 4
    • 67149086996 scopus 로고    scopus 로고
    • Extensive demethylation of repetitive elements during seed development underlies gene imprinting
    • Gehring M., Bubb K.L., Henikoff S. Extensive demethylation of repetitive elements during seed development underlies gene imprinting. Science 2009, 324:1447-1451.
    • (2009) Science , vol.324 , pp. 1447-1451
    • Gehring, M.1    Bubb, K.L.2    Henikoff, S.3
  • 5
    • 79960716754 scopus 로고    scopus 로고
    • Multisubunit RNA polymerases IV and V: purveyors of non-coding RNA for plant gene silencing
    • Haag J.R., Pikaard C.S. Multisubunit RNA polymerases IV and V: purveyors of non-coding RNA for plant gene silencing. Nat. Rev. Mol. Cell Biol. 2011, 12:483-492.
    • (2011) Nat. Rev. Mol. Cell Biol. , vol.12 , pp. 483-492
    • Haag, J.R.1    Pikaard, C.S.2
  • 6
    • 79952535972 scopus 로고    scopus 로고
    • Regulation and function of DNA methylation in plants and animals
    • He X.J., Chen T., Zhu J.K. Regulation and function of DNA methylation in plants and animals. Cell Res. 2011, 21:442-465.
    • (2011) Cell Res. , vol.21 , pp. 442-465
    • He, X.J.1    Chen, T.2    Zhu, J.K.3
  • 7
    • 0031792779 scopus 로고    scopus 로고
    • Identification and characterization of a family of mammalian methyl-CpG binding proteins
    • Hendrich B., Bird A. Identification and characterization of a family of mammalian methyl-CpG binding proteins. Mol. Cell. Biol. 1998, 18:6538-6547.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 6538-6547
    • Hendrich, B.1    Bird, A.2
  • 8
    • 79953746026 scopus 로고    scopus 로고
    • An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress
    • Ito H., Gaubert H., Bucher E., Mirouze M., Vaillant I., Paszkowski J. An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress. Nature 2011, 472:115-119.
    • (2011) Nature , vol.472 , pp. 115-119
    • Ito, H.1    Gaubert, H.2    Bucher, E.3    Mirouze, M.4    Vaillant, I.5    Paszkowski, J.6
  • 10
    • 84886860116 scopus 로고    scopus 로고
    • TET enzymes, TDG and the dynamics of DNA demethylation
    • Kohli R.M., Zhang Y. TET enzymes, TDG and the dynamics of DNA demethylation. Nature 2013, 502:472-479.
    • (2013) Nature , vol.502 , pp. 472-479
    • Kohli, R.M.1    Zhang, Y.2
  • 11
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • Law J.A., Jacobsen S.E. Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat. Rev. Genet. 2010, 11:204-220.
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 13
    • 79959921519 scopus 로고    scopus 로고
    • Genetic and genomic evidence that sucrose is a global regulator of plant responses to phosphate starvation in Arabidopsis
    • Lei M., Liu Y., Zhang B., Zhao Y., Wang X., Zhou Y., Raghothama K.G., Liu D. Genetic and genomic evidence that sucrose is a global regulator of plant responses to phosphate starvation in Arabidopsis. Plant Physiol. 2011, 156:1116-1130.
    • (2011) Plant Physiol. , vol.156 , pp. 1116-1130
    • Lei, M.1    Liu, Y.2    Zhang, B.3    Zhao, Y.4    Wang, X.5    Zhou, Y.6    Raghothama, K.G.7    Liu, D.8
  • 15
    • 84891932593 scopus 로고    scopus 로고
    • Application of the CRISPR-Cas system for efficient genome engineering in plants
    • Mao Y., Zhang H., Xu N., Zhang B., Gou F., Zhu J.-K. Application of the CRISPR-Cas system for efficient genome engineering in plants. Mol. Plant 2013, 6:2008-2011.
    • (2013) Mol. Plant , vol.6 , pp. 2008-2011
    • Mao, Y.1    Zhang, H.2    Xu, N.3    Zhang, B.4    Gou, F.5    Zhu, J.-K.6
  • 16
    • 84901041535 scopus 로고    scopus 로고
    • RNA-directed DNA methylation: an epigenetic pathway of increasing complexity
    • Matzke M.A., Mosher R.A. RNA-directed DNA methylation: an epigenetic pathway of increasing complexity. Nat. Rev. Genet. 2014, 15:394-408.
    • (2014) Nat. Rev. Genet. , vol.15 , pp. 394-408
    • Matzke, M.A.1    Mosher, R.A.2
  • 17
    • 0000213492 scopus 로고
    • Reversible methylation and inactivation of marker genes in sequentially transformed tobacco plants
    • Matzke M.A., Primig M., Trnovsky J., Matzke A.J. Reversible methylation and inactivation of marker genes in sequentially transformed tobacco plants. EMBO J. 1989, 8:643-649.
    • (1989) EMBO J. , vol.8 , pp. 643-649
    • Matzke, M.A.1    Primig, M.2    Trnovsky, J.3    Matzke, A.J.4
  • 19
    • 84862298246 scopus 로고    scopus 로고
    • A histone acetyltransferase regulates active DNA demethylation in Arabidopsis
    • Qian W., Miki D., Zhang H., Liu Y., Zhang X., Tang K., Kan Y., La H., Li X., Li S., et al. A histone acetyltransferase regulates active DNA demethylation in Arabidopsis. Science 2012, 336:1445-1448.
    • (2012) Science , vol.336 , pp. 1445-1448
    • Qian, W.1    Miki, D.2    Zhang, H.3    Liu, Y.4    Zhang, X.5    Tang, K.6    Kan, Y.7    La, H.8    Li, X.9    Li, S.10
  • 20
    • 84906101577 scopus 로고    scopus 로고
    • Regulation of active DNA demethylation by an α-crystallin domain protein in Arabidopsis
    • Qian W., Miki D., Lei M., Zhu X., Zhang H., Liu Y., Li Y., Lang Z., Wang J., Tang K., et al. Regulation of active DNA demethylation by an α-crystallin domain protein in Arabidopsis. Mol. Cell 2014, 55:361-371.
    • (2014) Mol. Cell , vol.55 , pp. 361-371
    • Qian, W.1    Miki, D.2    Lei, M.3    Zhu, X.4    Zhang, H.5    Liu, Y.6    Li, Y.7    Lang, Z.8    Wang, J.9    Tang, K.10
  • 21
    • 57649196594 scopus 로고    scopus 로고
    • DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45
    • Rai K., Huggins I.J., James S.R., Karpf A.R., Jones D.A., Cairns B.R. DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45. Cell 2008, 135:1201-1212.
    • (2008) Cell , vol.135 , pp. 1201-1212
    • Rai, K.1    Huggins, I.J.2    James, S.R.3    Karpf, A.R.4    Jones, D.A.5    Cairns, B.R.6
  • 22
    • 84884214357 scopus 로고    scopus 로고
    • Nucleosome-free region dominates histone acetylation in targeting SWR1 to promoters for H2A.Z replacement
    • Ranjan A., Mizuguchi G., FitzGerald P.C., Wei D., Wang F., Huang Y., Luk E., Woodcock C.L., Wu C. Nucleosome-free region dominates histone acetylation in targeting SWR1 to promoters for H2A.Z replacement. Cell 2013, 154:1232-1245.
    • (2013) Cell , vol.154 , pp. 1232-1245
    • Ranjan, A.1    Mizuguchi, G.2    FitzGerald, P.C.3    Wei, D.4    Wang, F.5    Huang, Y.6    Luk, E.7    Woodcock, C.L.8    Wu, C.9
  • 23
    • 2442479896 scopus 로고    scopus 로고
    • DNA and histone methylation in plants
    • Tariq M., Paszkowski J. DNA and histone methylation in plants. Trends Genet. 2004, 20:244-251.
    • (2004) Trends Genet. , vol.20 , pp. 244-251
    • Tariq, M.1    Paszkowski, J.2
  • 24
    • 84884335747 scopus 로고    scopus 로고
    • RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1
    • Wang X., Duan C.-G., Tang K., Wang B., Zhang H., Lei M., Lu K., Mangrauthia S.K., Wang P., Zhu G., et al. RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1. Proc. Natl. Acad. Sci. USA 2013, 110:15467-15472.
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 15467-15472
    • Wang, X.1    Duan, C.-G.2    Tang, K.3    Wang, B.4    Zhang, H.5    Lei, M.6    Lu, K.7    Mangrauthia, S.K.8    Wang, P.9    Zhu, G.10
  • 25
    • 55449131096 scopus 로고    scopus 로고
    • Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes
    • Wierzbicki A.T., Haag J.R., Pikaard C.S. Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes. Cell 2008, 135:635-648.
    • (2008) Cell , vol.135 , pp. 635-648
    • Wierzbicki, A.T.1    Haag, J.R.2    Pikaard, C.S.3
  • 26
    • 84902124512 scopus 로고    scopus 로고
    • Overproduction of stomatal lineage cells in Arabidopsis mutants defective in active DNA demethylation
    • Yamamuro C., Miki D., Zheng Z., Ma J., Wang J., Yang Z., Dong J., Zhu J.K. Overproduction of stomatal lineage cells in Arabidopsis mutants defective in active DNA demethylation. Nat. Commun. 2014, 5:4062.
    • (2014) Nat. Commun. , vol.5 , pp. 4062
    • Yamamuro, C.1    Miki, D.2    Zheng, Z.3    Ma, J.4    Wang, J.5    Yang, Z.6    Dong, J.7    Zhu, J.K.8
  • 27
    • 67650711619 scopus 로고    scopus 로고
    • A clustering approach for identification of enriched domains from histone modification ChIP-Seq data
    • Zang C., Schones D.E., Zeng C., Cui K., Zhao K., Peng W. A clustering approach for identification of enriched domains from histone modification ChIP-Seq data. Bioinformatics 2009, 25:1952-1958.
    • (2009) Bioinformatics , vol.25 , pp. 1952-1958
    • Zang, C.1    Schones, D.E.2    Zeng, C.3    Cui, K.4    Zhao, K.5    Peng, W.6
  • 28
    • 33846900215 scopus 로고    scopus 로고
    • Methyl-CpG-binding domain proteins in plants: interpreters of DNA methylation
    • Zemach A., Grafi G. Methyl-CpG-binding domain proteins in plants: interpreters of DNA methylation. Trends Plant Sci. 2007, 12:80-85.
    • (2007) Trends Plant Sci. , vol.12 , pp. 80-85
    • Zemach, A.1    Grafi, G.2
  • 29
    • 84875741680 scopus 로고    scopus 로고
    • The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
    • Zemach A., Kim M.Y., Hsieh P.H., Coleman-Derr D., Eshed-Williams L., Thao K., Harmer S.L., Zilberman D. The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin. Cell 2013, 153:193-205.
    • (2013) Cell , vol.153 , pp. 193-205
    • Zemach, A.1    Kim, M.Y.2    Hsieh, P.H.3    Coleman-Derr, D.4    Eshed-Williams, L.5    Thao, K.6    Harmer, S.L.7    Zilberman, D.8
  • 31
    • 84904968487 scopus 로고    scopus 로고
    • REPRESSOR OF SILENCING5 Encodes a Member of the Small Heat Shock Protein Family and Is Required for DNA Demethylation in Arabidopsis
    • Zhao Y., Xie S., Li X., Wang C., Chen Z., Lai J., Gong Z. REPRESSOR OF SILENCING5 Encodes a Member of the Small Heat Shock Protein Family and Is Required for DNA Demethylation in Arabidopsis. Plant Cell 2014, 26:2660-2675.
    • (2014) Plant Cell , vol.26 , pp. 2660-2675
    • Zhao, Y.1    Xie, S.2    Li, X.3    Wang, C.4    Chen, Z.5    Lai, J.6    Gong, Z.7
  • 32
    • 73349104113 scopus 로고    scopus 로고
    • Active DNA demethylation mediated by DNA glycosylases
    • Zhu J.K. Active DNA demethylation mediated by DNA glycosylases. Annu. Rev. Genet. 2009, 43:143-166.
    • (2009) Annu. Rev. Genet. , vol.43 , pp. 143-166
    • Zhu, J.K.1
  • 33
    • 33845866061 scopus 로고    scopus 로고
    • The DNA glycosylase/lyase ROS1 functions in pruning DNA methylation patterns in Arabidopsis
    • Zhu J., Kapoor A., Sridhar V.V., Agius F., Zhu J.K. The DNA glycosylase/lyase ROS1 functions in pruning DNA methylation patterns in Arabidopsis. Curr. Biol. 2007, 17:54-59.
    • (2007) Curr. Biol. , vol.17 , pp. 54-59
    • Zhu, J.1    Kapoor, A.2    Sridhar, V.V.3    Agius, F.4    Zhu, J.K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.