-
1
-
-
0037046810
-
Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing
-
Cao X, Jacobsen SE (2002) Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr Biol 12(13):1138-1144.
-
(2002)
Curr Biol
, vol.12
, Issue.13
, pp. 1138-1144
-
-
Cao, X.1
Jacobsen, S.E.2
-
2
-
-
33748629119
-
Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis
-
Zhang X, et al. (2006) Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis. Cell 126(6):1189-1201.
-
(2006)
Cell
, vol.126
, Issue.6
, pp. 1189-1201
-
-
Zhang, X.1
-
3
-
-
34249330696
-
Epigenetic inheritance in plants
-
Henderson IR, Jacobsen SE (2007) Epigenetic inheritance in plants. Nature 447(7143): 418-424.
-
(2007)
Nature
, vol.447
, Issue.7143
, pp. 418-424
-
-
Henderson, I.R.1
Jacobsen, S.E.2
-
4
-
-
77249170184
-
Establishing, maintaining and modifying DNA methylation patterns in plants and animals
-
Law JA, Jacobsen SE (2010) Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet 11(3):204-220.
-
(2010)
Nat Rev Genet
, vol.11
, Issue.3
, pp. 204-220
-
-
Law, J.A.1
Jacobsen, S.E.2
-
5
-
-
65249148019
-
RNA-mediated chromatin-based silencing in plants
-
Matzke M, Kanno T, Daxinger L, Huettel B, Matzke AJ (2009) RNA-mediated chromatin-based silencing in plants. Curr Opin Cell Biol 21(3):367-376.
-
(2009)
Curr Opin Cell Biol
, vol.21
, Issue.3
, pp. 367-376
-
-
Matzke, M.1
Kanno, T.2
Daxinger, L.3
Huettel, B.4
Matzke, A.J.5
-
6
-
-
79960716754
-
Multisubunit RNA polymerases IV and V: Purveyors of noncoding RNA for plant gene silencing
-
Haag JR, Pikaard CS (2011) Multisubunit RNA polymerases IV and V: Purveyors of noncoding RNA for plant gene silencing. Nat Rev Mol Cell Biol 12(8):483-492.
-
(2011)
Nat Rev Mol Cell Biol
, vol.12
, Issue.8
, pp. 483-492
-
-
Haag, J.R.1
Pikaard, C.S.2
-
7
-
-
79955120337
-
RNA-directed DNA methylation
-
Zhang H, Zhu JK (2011) RNA-directed DNA methylation. Curr Opin Plant Biol 14(2):142-147.
-
(2011)
Curr Opin Plant Biol
, vol.14
, Issue.2
, pp. 142-147
-
-
Zhang, H.1
Zhu, J.K.2
-
8
-
-
84869489307
-
The role of long non-coding RNA in transcriptional gene silencing
-
Wierzbicki AT (2012) The role of long non-coding RNA in transcriptional gene silencing. Curr Opin Plant Biol 15(5):517-522.
-
(2012)
Curr Opin Plant Biol
, vol.15
, Issue.5
, pp. 517-522
-
-
Wierzbicki, A.T.1
-
9
-
-
84881520399
-
A transcription fork model for Pol IV and Pol V-dependent RNA-directed DNA methylation
-
Pikaard CS, Haag JR, Pontes OM, Blevins T, Cocklin R (2012) A transcription fork model for Pol IV and Pol V-dependent RNA-directed DNA methylation. Cold Spring Harb Symp Quant Biol 77:205-212.
-
(2012)
Cold Spring Harb Symp Quant Biol
, vol.77
, pp. 205-212
-
-
Pikaard, C.S.1
Haag, J.R.2
Pontes, O.M.3
Blevins, T.4
Cocklin, R.5
-
10
-
-
0037074009
-
ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase
-
Gong Z, et al. (2002) ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase. Cell 111(6):803-814.
-
(2002)
Cell
, vol.111
, Issue.6
, pp. 803-814
-
-
Gong, Z.1
-
11
-
-
32044470027
-
DEMETER DNA glycosylase establishes MEDEA polycomb gene self-imprinting by allele-specific demethylation
-
Gehring M, et al. (2006) DEMETER DNA glycosylase establishes MEDEA polycomb gene self-imprinting by allele-specific demethylation. Cell 124(3):495-506.
-
(2006)
Cell
, vol.124
, Issue.3
, pp. 495-506
-
-
Gehring, M.1
-
12
-
-
33746807366
-
Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation
-
Agius F, Kapoor A, Zhu JK (2006) Role of the Arabidopsis DNA glycosylase/lyase ROS1 in active DNA demethylation. Proc Natl Acad Sci USA 103(31):11796-11801.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.31
, pp. 11796-11801
-
-
Agius, F.1
Kapoor, A.2
Zhu, J.K.3
-
13
-
-
46249125864
-
Arabidopsis DEMETER-LIKE proteins DML2 and DML3 are required for appropriate distribution of DNA methylation marks
-
Ortega-Galisteo AP, Morales-Ruiz T, Ariza RR, Roldán-Arjona T (2008) Arabidopsis DEMETER-LIKE proteins DML2 and DML3 are required for appropriate distribution of DNA methylation marks. Plant Mol Biol 67(6):671-681.
-
(2008)
Plant Mol Biol
, vol.67
, Issue.6
, pp. 671-681
-
-
Ortega-Galisteo, A.P.1
Morales-Ruiz, T.2
Ariza, R.R.3
Roldán-Arjona, T.4
-
14
-
-
34249853277
-
DNA demethylation in the Arabidopsis genome
-
Penterman J, et al. (2007) DNA demethylation in the Arabidopsis genome. Proc Natl Acad Sci USA 104(16):6752-6757.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.16
, pp. 6752-6757
-
-
Penterman, J.1
-
15
-
-
73349104113
-
Active DNA demethylation mediated by DNA glycosylases
-
Zhu JK (2009) Active DNA demethylation mediated by DNA glycosylases. Annu Rev Genet 43:143-166.
-
(2009)
Annu Rev Genet
, vol.43
, pp. 143-166
-
-
Zhu, J.K.1
-
17
-
-
84862298246
-
A histone acetyltransferase regulates active DNA demethylation in Arabidopsis
-
Qian W, et al. (2012) A histone acetyltransferase regulates active DNA demethylation in Arabidopsis. Science 336(6087):1445-1448.
-
(2012)
Science
, vol.336
, Issue.6087
, pp. 1445-1448
-
-
Qian, W.1
-
19
-
-
84866981889
-
Dual binding of chromomethylase domains to H3K9me2-containing nucleosomes directs DNA methylation in plants
-
Du J, et al. (2012) Dual binding of chromomethylase domains to H3K9me2-containing nucleosomes directs DNA methylation in plants. Cell 151(1):167-180.
-
(2012)
Cell
, vol.151
, Issue.1
, pp. 167-180
-
-
Du, J.1
-
20
-
-
84879417659
-
Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1
-
Law JA, et al. (2013) Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature 498(7454):385-389.
-
(2013)
Nature
, vol.498
, Issue.7454
, pp. 385-389
-
-
Law, J.A.1
-
21
-
-
38549116060
-
Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana
-
Saze H, Shiraishi A, Miura A, Kakutani T (2008) Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana. Science 319(5862):462-465.
-
(2008)
Science
, vol.319
, Issue.5862
, pp. 462-465
-
-
Saze, H.1
Shiraishi, A.2
Miura, A.3
Kakutani, T.4
-
22
-
-
65349171662
-
An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites
-
Miura A, et al. (2009) An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites. EMBO J 28(8):1078-1086.
-
(2009)
EMBO J
, vol.28
, Issue.8
, pp. 1078-1086
-
-
Miura, A.1
-
23
-
-
77954659099
-
Relationship between nucleosome positioning and DNA methylation
-
Chodavarapu RK, et al. (2010) Relationship between nucleosome positioning and DNA methylation. Nature 466(7304):388-392.
-
(2010)
Nature
, vol.466
, Issue.7304
, pp. 388-392
-
-
Chodavarapu, R.K.1
-
24
-
-
84862650101
-
A conserved role for intragenic DNA methylation in alternative pre-mRNA splicing
-
Oberdoerffer S (2012) A conserved role for intragenic DNA methylation in alternative pre-mRNA splicing. Transcription 3(3):106-109.
-
(2012)
Transcription
, vol.3
, Issue.3
, pp. 106-109
-
-
Oberdoerffer, S.1
-
25
-
-
84861848461
-
Co-transcriptional regulation of alternative premRNA splicing
-
Shukla S, Oberdoerffer S (2012) Co-transcriptional regulation of alternative premRNA splicing. Biochim Biophys Acta 1819(7):673-683.
-
(2012)
Biochim Biophys Acta
, vol.1819
, Issue.7
, pp. 673-683
-
-
Shukla, S.1
Oberdoerffer, S.2
-
26
-
-
78649955848
-
The honey bee epigenomes: Differential methylation of brain DNA in queens and workers
-
Lyko F, et al. (2010) The honey bee epigenomes: Differential methylation of brain DNA in queens and workers. PLoS Biol 8(11):e1000506.
-
(2010)
PLoS Biol
, vol.8
, Issue.11
-
-
Lyko, F.1
-
27
-
-
80455176999
-
CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing
-
Shukla S, et al. (2011) CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing. Nature 479(7371):74-79.
-
(2011)
Nature
, vol.479
, Issue.7371
, pp. 74-79
-
-
Shukla, S.1
-
28
-
-
0142153406
-
Methylation at CpG islands in intron 1 of EGR2 confers enhancer-like activity
-
Unoki M, Nakamura Y (2003) Methylation at CpG islands in intron 1 of EGR2 confers enhancer-like activity. FEBS Lett 554(1-2):67-72.
-
(2003)
FEBS Lett
, vol.554
, Issue.1-2
, pp. 67-72
-
-
Unoki, M.1
Nakamura, Y.2
-
29
-
-
84863855972
-
DNA methylation in an intron of the IBM1 histone demethylase gene stabilizes chromatin modification patterns
-
Rigal M, Kevei Z, Pélissier T, Mathieu O (2012) DNA methylation in an intron of the IBM1 histone demethylase gene stabilizes chromatin modification patterns. EMBO J 31(13):2981-2993.
-
(2012)
EMBO J
, vol.31
, Issue.13
, pp. 2981-2993
-
-
Rigal, M.1
Kevei, Z.2
Pélissier, T.3
Mathieu, O.4
-
30
-
-
84867539515
-
Epigenetic control of alternative mRNA processing at the imprinted Herc3/Nap1l5 locus
-
Cowley M, Wood AJ, Böhm S, Schulz R, Oakey RJ (2012) Epigenetic control of alternative mRNA processing at the imprinted Herc3/Nap1l5 locus. Nucleic Acids Res 40(18):8917-8926.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.18
, pp. 8917-8926
-
-
Cowley, M.1
Wood, A.J.2
Böhm, S.3
Schulz, R.4
Oakey, R.J.5
-
31
-
-
43249087733
-
Regulation of alternative polyadenylation by genomic imprinting
-
Wood AJ, et al. (2008) Regulation of alternative polyadenylation by genomic imprinting. Genes Dev 22(9):1141-1146.
-
(2008)
Genes Dev
, vol.22
, Issue.9
, pp. 1141-1146
-
-
Wood, A.J.1
-
32
-
-
79959921519
-
Genetic and genomic evidence that sucrose is a global regulator of plant responses to phosphate starvation in Arabidopsis
-
Lei M, et al. (2011) Genetic and genomic evidence that sucrose is a global regulator of plant responses to phosphate starvation in Arabidopsis. Plant Physiol 156(3):1116-1130.
-
(2011)
Plant Physiol
, vol.156
, Issue.3
, pp. 1116-1130
-
-
Lei, M.1
-
33
-
-
70349739736
-
The Integrated Genome Browser: Free software for distribution and exploration of genome-scale datasets
-
Nicol JW, Helt GA, Blanchard SG, Jr., Raja A, Loraine AE (2009) The Integrated Genome Browser: Free software for distribution and exploration of genome-scale datasets. Bioinformatics 25(20):2730-2731.
-
(2009)
Bioinformatics
, vol.25
, Issue.20
, pp. 2730-2731
-
-
Nicol, J.W.1
Helt, G.A.2
Blanchard Jr., S.G.3
Raja, A.4
Loraine, A.E.5
-
34
-
-
0032991918
-
The BAH (bromo-adjacent homology) domain: A link between DNA methylation, replication and transcriptional regulation
-
Callebaut I, Courvalin JC, Mornon JP (1999) The BAH (bromo-adjacent homology) domain: A link between DNA methylation, replication and transcriptional regulation. FEBS Lett 446(1):189-193.
-
(1999)
FEBS Lett
, vol.446
, Issue.1
, pp. 189-193
-
-
Callebaut, I.1
Courvalin, J.C.2
Mornon, J.P.3
-
35
-
-
33745561418
-
Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis
-
Huettel B, et al. (2006) Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis. EMBO J 25(12):2828-2836.
-
(2006)
EMBO J
, vol.25
, Issue.12
, pp. 2828-2836
-
-
Huettel, B.1
-
37
-
-
79956078648
-
Epigenomic and RNA structural correlates of polyadenylation
-
Khaladkar M, Smyda M, Hannenhalli S (2011) Epigenomic and RNA structural correlates of polyadenylation. RNA Biol 8(3):529-537.
-
(2011)
RNA Biol
, vol.8
, Issue.3
, pp. 529-537
-
-
Khaladkar, M.1
Smyda, M.2
Hannenhalli, S.3
|