-
1
-
-
84868314576
-
Altered starch turnover in the maternal plant has major effects on Arabidopsis fruit growth and seed composition
-
Andriotis, V.M., Pike, M.J., Schwarz, S.L., Rawsthorne, S., Wang, T.L., and Smith, A.M. (2012). Altered starch turnover in the maternal plant has major effects on Arabidopsis fruit growth and seed composition. Plant Physiol. 10. 160: 1175-1186.
-
(2012)
Plant Physiol
, vol.10
, Issue.160
, pp. 1175-1186
-
-
Andriotis, V.M.1
Pike, M.J.2
Schwarz, S.L.3
Rawsthorne, S.4
Wang, T.L.5
Smith, A.M.6
-
2
-
-
77954395693
-
Identification of the 2-hydroxyglutarate and isovaleryl-CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria
-
Araújo, W.L., Ishizaki, K., Nunes-Nesi, A., Larson, T.R., Tohge, T., Krahnert, I.,Witt, S., Obata, T., Schauer,N., Graham, I.A., Leaver, C.J., and Fernie, A.R. (2010). Identification of the 2-hydroxyglutarate and isovaleryl-CoA dehydrogenases as alternative electron donors linking lysine catabolism to the electron transport chain of Arabidopsis mitochondria. Plant Cell 10. 22: 1549-1563.
-
(2010)
Plant Cell
, vol.10
, Issue.22
, pp. 1549-1563
-
-
Araújo, W.L.1
Ishizaki, K.2
Nunes-Nesi, A.3
Larson, T.R.4
Tohge, T.5
Krahnert, I.6
Witt, S.7
Obata, T.8
Schauer, N.9
Graham, I.A.10
Leaver, C.J.11
Fernie, A.R.12
-
3
-
-
80052334837
-
Protein degradation - an alternative respiratory substrate for stressed plants
-
Araújo, W.L., Tohge, T., Ishizaki, K., Leaver, C.J., and Fernie, A.R. (2011). Protein degradation - an alternative respiratory substrate for stressed plants. Trends Plant Sci. 10. 16: 489-498.
-
(2011)
Trends Plant Sci
, vol.10
, Issue.16
, pp. 489-498
-
-
Araújo, W.L.1
Tohge, T.2
Ishizaki, K.3
Leaver, C.J.4
Fernie, A.R.5
-
4
-
-
79955013096
-
Reboot the system thanks to protein posttranslational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment
-
Arc, E., Galland, M., Cueff, G., Godin, B., Lounifi10. , I., Job, D., and Rajjou, L. (2011). Reboot the system thanks to protein posttranslational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment. Proteomics 10. 11: 1606-1618.
-
(2011)
Proteomics
, vol.10
, Issue.11
, pp. 1606-1618
-
-
Arc, E.1
Galland, M.2
Cueff, G.3
Godin, B.4
Lounifi, I.5
Job, D.6
Rajjou, L.7
-
5
-
-
84906258217
-
At long last: Evidence for pexophagy in plants
-
Avin-Wittenberg, T., and Fernie, A.R. (2014). At long last: evidence for pexophagy in plants. Mol. Plant 10. 7: 1257-1260.
-
(2014)
Mol. Plant
, vol.10
, Issue.7
, pp. 1257-1260
-
-
Avin-Wittenberg, T.1
Fernie, A.R.2
-
6
-
-
84858341692
-
Variations on a theme: Plant autophagy in comparison to yeast and mammals
-
Avin-Wittenberg, T., Honig, A., and Galili, G. (2012). Variations on a theme: plant autophagy in comparison to yeast and mammals. Protoplasma 10. 249: 285-299.
-
(2012)
Protoplasma
, vol.10
, Issue.249
, pp. 285-299
-
-
Avin-Wittenberg, T.1
Honig, A.2
Galili, G.3
-
7
-
-
69349103147
-
Function and regulation of macroautophagy in plants
-
Bassham, D.C. (2009). Function and regulation of macroautophagy in plants. Biochim. Biophys. Acta 10. 1793: 1397-1403.
-
(2009)
Biochim. Biophys. Acta
, vol.10
, Issue.1793
, pp. 1397-1403
-
-
Bassham, D.C.1
-
8
-
-
33845665396
-
Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior
-
Carrari, F., Baxter, C., Usadel, B., Urbanczyk-Wochniak, E., Zanor, M.-I., Nunes-Nesi, A., Nikiforova, V., Centero, D., Ratzka, A., Pauly, M., Sweetlove, L.J., and Fernie, A.R. (2006). Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behavior. Plant Physiol. 10. 142: 1380-1396.
-
(2006)
Plant Physiol
, vol.10
, Issue.142
, pp. 1380-1396
-
-
Carrari, F.1
Baxter, C.2
Usadel, B.3
Urbanczyk-Wochniak, E.4
Zanor, M.-I.5
Nunes-Nesi, A.6
Nikiforova, V.7
Centero, D.8
Ratzka, A.9
Pauly, M.10
Sweetlove, L.J.11
Fernie, A.R.12
-
9
-
-
0037031843
-
The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana
-
Doelling, J.H., Walker, J.M., Friedman, E.M., Thompson, A.R., and Vierstra, R.D. (2002). The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana. J. Biol. Chem. 10. 277: 33105-33114.
-
(2002)
J. Biol. Chem
, vol.10
, Issue.277
, pp. 33105-33114
-
-
Doelling, J.H.1
Walker, J.M.2
Friedman, E.M.3
Thompson, A.R.4
Vierstra, R.D.5
-
10
-
-
79959952405
-
Liver autophagy contributes to the maintenance of blood glucose and amino acid levels
-
Ezaki, J., et al. (2011). Liver autophagy contributes to the maintenance of blood glucose and amino acid levels. Autophagy 10. 7: 727-736.
-
(2011)
Autophagy
, vol.10
, Issue.7
, pp. 727-736
-
-
Ezaki, J.1
-
11
-
-
33751093050
-
Arabidopsis seed development and germination is associated with temporally distinct metabolic switches
-
Fait, A., Angelovici, R., Less, H., Ohad, I., Urbanczyk-Wochniak, E., Fernie, A.R., and Galili, G. (2006). Arabidopsis seed development and germination is associated with temporally distinct metabolic switches. Plant Physiol. 10. 142: 839-854.
-
(2006)
Plant Physiol
, vol.10
, Issue.142
, pp. 839-854
-
-
Fait, A.1
Angelovici, R.2
Less, H.3
Ohad, I.4
Urbanczyk-Wochniak, E.5
Fernie, A.R.6
Galili, G.7
-
12
-
-
84888418176
-
Disrupting autophagy restores peroxisome function to an Arabidopsis lon2 mutant and reveals a role for the LON2 protease in peroxisomal matrix protein degradation
-
Farmer, L.M., Rinaldi, M.A., Young, P.G., Danan, C.H., Burkhart, S.E., and Bartel, B. (2013). Disrupting autophagy restores peroxisome function to an Arabidopsis lon2 mutant and reveals a role for the LON2 protease in peroxisomal matrix protein degradation. Plant Cell 10. 25: 4085-4100.
-
(2013)
Plant Cell
, vol.10
, Issue.25
, pp. 4085-4100
-
-
Farmer, L.M.1
Rinaldi, M.A.2
Young, P.G.3
Danan, C.H.4
Burkhart, S.E.5
Bartel, B.6
-
13
-
-
80051933578
-
Recommendations for reporting metabolite data
-
Fernie, A.R., Aharoni, A., Willmitzer, L., Stitt,M., Tohge, T., Kopka, J., Carroll, A.J., Saito, K., Fraser, P.D., and DeLuca, V. (2011). Recommendations for reporting metabolite data. Plant Cell 10. 23: 2477-2482.
-
(2011)
Plant Cell
, vol.10
, Issue.23
, pp. 2477-2482
-
-
Fernie, A.R.1
Aharoni, A.2
Willmitzer, L.3
Stitt, M.4
Tohge, T.5
Kopka, J.6
Carroll, A.J.7
Saito, K.8
Fraser, P.D.9
DeLuca, V.10
-
14
-
-
0035121892
-
Fructose 2,6-bisphosphate activates pyrophosphate: Fructose-6- phosphate 1-phosphotransferase and increases triose phosphate to hexose phosphate cycling in heterotrophic cells
-
Fernie, A.R., Roscher, A., Ratcliffe, R.G., and Kruger, N.J. (2001). Fructose 2,6-bisphosphate activates pyrophosphate: fructose-6- phosphate 1-phosphotransferase and increases triose phosphate to hexose phosphate cycling in heterotrophic cells. Planta 10. 212: 250-263.
-
(2001)
Planta
, vol.10
, Issue.212
, pp. 250-263
-
-
Fernie, A.R.1
Roscher, A.2
Ratcliffe, R.G.3
Kruger, N.J.4
-
15
-
-
52749089018
-
Reserve accumulation in legume seeds
-
Gallardo, K., Thompson, R., and Burstin, J. (2008). Reserve accumulation in legume seeds. C. R. Biol. 10. 331: 755-762.
-
(2008)
C. R. Biol
, vol.10
, Issue.331
, pp. 755-762
-
-
Gallardo, K.1
Thompson, R.2
Burstin, J.3
-
16
-
-
79955701462
-
Arabidopsis CPR5 independently regulates seed germination and postgermination arrest of development through LOX pathway and ABA signaling
-
Gao, G., Zhang, S., Wang, C., Yang, X., Wang, Y., Su, X., Du, J., and Yang, C. (2011). Arabidopsis CPR5 independently regulates seed germination and postgermination arrest of development through LOX pathway and ABA signaling. PLoS ONE 10. 6: e19406.
-
(2011)
PLoS ONE
, vol.10
, Issue.6
-
-
Gao, G.1
Zhang, S.2
Wang, C.3
Yang, X.4
Wang, Y.5
Su, X.6
Du, J.7
Yang, C.8
-
17
-
-
77953485056
-
Acyl-CoA-binding protein 2 binds lysophospholipase 2 and lysoPC to promote tolerance to cadmium-induced oxidative stress in transgenic Arabidopsis
-
Gao, W., Li, H.Y., Xiao, S., and Chye, M.L. (2010). Acyl-CoA-binding protein 2 binds lysophospholipase 2 and lysoPC to promote tolerance to cadmium-induced oxidative stress in transgenic Arabidopsis. Plant J. 10. 62: 989-1003.
-
(2010)
Plant J
, vol.10
, Issue.62
, pp. 989-1003
-
-
Gao, W.1
Li, H.Y.2
Xiao, S.3
Chye, M.L.4
-
18
-
-
0033832777
-
Metabolic activity decreases as an adaptive response to low internal oxygen in growing potato tubers
-
Geigenberger, P., Fernie, A.R., Gibon, Y., Christ, M., and Stitt, M. (2000). Metabolic activity decreases as an adaptive response to low internal oxygen in growing potato tubers. Biol. Chem. 10. 381: 723-740.
-
(2000)
Biol. Chem
, vol.10
, Issue.381
, pp. 723-740
-
-
Geigenberger, P.1
Fernie, A.R.2
Gibon, Y.3
Christ, M.4
Stitt, M.5
-
19
-
-
0030901402
-
Regulation of sucrose and starch metabolism in potato tubers in response to short-term water deficit
-
Geigenberger, P., Reimholz, R., Geiger, M., Merlo, L., Canale, V., and Stitt, M. (1997). Regulation of sucrose and starch metabolism in potato tubers in response to short-term water deficit. Planta 10. 201: 502-518.
-
(1997)
Planta
, vol.10
, Issue.201
, pp. 502-518
-
-
Geigenberger, P.1
Reimholz, R.2
Geiger, M.3
Merlo, L.4
Canale, V.5
Stitt, M.6
-
20
-
-
80054061389
-
Elemental formula annotation of polar and lipophilic metabolites using (13) C, (15) N and (34) S isotope labelling, in combination with high-resolution mass spectrometry
-
Giavalisco, P., Li, Y., Matthes, A., Eckhardt, A., Hubberten, H.M., Hesse, H., Segu, S., Hummel, J., Kohl, K., and Willmitzer, L. (2011). Elemental formula annotation of polar and lipophilic metabolites using (13) C, (15) N and (34) S isotope labelling, in combination with high-resolution mass spectrometry. Plant J. 10. 68: 364-376.
-
(2011)
Plant J
, vol.10
, Issue.68
, pp. 364-376
-
-
Giavalisco, P.1
Li, Y.2
Matthes, A.3
Eckhardt, A.4
Hubberten, H.M.5
Hesse, H.6
Segu, S.7
Hummel, J.8
Kohl, K.9
Willmitzer, L.10
-
21
-
-
0141453021
-
Enzymes of glycolysis are functionally associated with the mitochondrion in Arabidopsis cells
-
Giegé, P., Heazlewood, J.L., Roessner-Tunali, U., Millar, A.H., Fernie, A.R., Leaver, C.J., and Sweetlove, L.J. (2003). Enzymes of glycolysis are functionally associated with the mitochondrion in Arabidopsis cells. Plant Cell 10. 15: 2140-2151.
-
(2003)
Plant Cell
, vol.10
, Issue.15
, pp. 2140-2151
-
-
Giegé, P.1
Heazlewood, J.L.2
Roessner-Tunali, U.3
Millar, A.H.4
Fernie, A.R.5
Leaver, C.J.6
Sweetlove, L.J.7
-
22
-
-
44949151664
-
Seed storage oil mobilization
-
Graham, I.A. (2008). Seed storage oil mobilization. Annu. Rev. Plant Biol. 10. 59: 115-142.
-
(2008)
Annu. Rev. Plant Biol
, vol.10
, Issue.59
, pp. 115-142
-
-
Graham, I.A.1
-
23
-
-
0036845735
-
Redundant proteolytic mechanisms process seed storage proteins in the absence of seed-type members of the vacuolar processing enzyme family of cysteine proteases
-
Gruis, D.F., Selinger, D.A., Curran, J.M., and Jung, R. (2002). Redundant proteolytic mechanisms process seed storage proteins in the absence of seed-type members of the vacuolar processing enzyme family of cysteine proteases. Plant Cell 10. 14: 2863-2882.
-
(2002)
Plant Cell
, vol.10
, Issue.14
, pp. 2863-2882
-
-
Gruis, D.F.1
Selinger, D.A.2
Curran, J.M.3
Jung, R.4
-
24
-
-
84880259390
-
Physiological and metabolic consequences of autophagy deficiency for the management of nitrogen and protein resources in Arabidopsis leaves depending on nitrate availability
-
Guiboileau, A., Avila-Ospina, L., Yoshimoto, K., Soulay, F., Azzopardi, M., Marmagne, A., Lothier, J., and Masclaux- Daubresse, C. (2013). Physiological and metabolic consequences of autophagy deficiency for the management of nitrogen and protein resources in Arabidopsis leaves depending on nitrate availability. New Phytol. 10. 199: 683-694.
-
(2013)
New Phytol
, vol.10
, Issue.199
, pp. 683-694
-
-
Guiboileau, A.1
Avila-Ospina, L.2
Yoshimoto, K.3
Soulay, F.4
Azzopardi, M.5
Marmagne, A.6
Lothier, J.7
Masclaux-Daubresse, C.8
-
25
-
-
84859608281
-
Autophagy machinery controls nitrogen remobilization at the whole-plant level under both limiting and ample nitrate conditions in Arabidopsis
-
Guiboileau, A., Yoshimoto, K., Soulay, F., Bataillé, M.P., Avice, J.C., and Masclaux-Daubresse, C. (2012). Autophagy machinery controls nitrogen remobilization at the whole-plant level under both limiting and ample nitrate conditions in Arabidopsis. New Phytol. 194: 732-740.
-
(2012)
New Phytol
, vol.194
, pp. 732-740
-
-
Guiboileau, A.1
Yoshimoto, K.2
Soulay, F.3
Bataillé, M.P.4
Avice, J.C.5
Masclaux-Daubresse, C.6
-
26
-
-
0035983934
-
Leaf senescence and starvationinduced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene
-
Hanaoka, H., Noda, T., Shirano, Y., Kato, T., Hayashi, H., Shibata, D., Tabata, S., and Ohsumi, Y. (2002). Leaf senescence and starvationinduced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene. Plant Physiol. 10. 129: 1181-1193.
-
(2002)
Plant Physiol
, vol.10
, Issue.129
, pp. 1181-1193
-
-
Hanaoka, H.1
Noda, T.2
Shirano, Y.3
Kato, T.4
Hayashi, H.5
Shibata, D.6
Tabata, S.7
Ohsumi, Y.8
-
27
-
-
56249106118
-
Validation of the design of feeding experiments involving [(14)C]substrates used to monitor metabolic flux in higher plants
-
Harrison, P.W., and Kruger, N.J. (2008). Validation of the design of feeding experiments involving [(14)C]substrates used to monitor metabolic flux in higher plants. Phytochemistry 10. 69: 2920- 2927.
-
(2008)
Phytochemistry
, vol.10
, Issue.69
, pp. 2920-2927
-
-
Harrison, P.W.1
Kruger, N.J.2
-
28
-
-
41449112760
-
Autophagy protein 6 (ATG6) is required for pollen germination in Arabidopsis thaliana
-
Harrison-Lowe, N.J., and Olsen, L.J. (2008). Autophagy protein 6 (ATG6) is required for pollen germination in Arabidopsis thaliana. Autophagy 10. 4: 339-348.
-
(2008)
Autophagy
, vol.10
, Issue.4
, pp. 339-348
-
-
Harrison-Lowe, N.J.1
Olsen, L.J.2
-
29
-
-
65549157489
-
Autophagic components contribute to hypersensitive cell death in Arabidopsis
-
Hofi10. us, D., Schultz-Larsen, T., Joensen, J., Tsitsigiannis, D.I., Petersen, N.H., Mattsson, O., Jørgensen, L.B., Jones, J.D., Mundy, J., and Petersen, M. (2009). Autophagic components contribute to hypersensitive cell death in Arabidopsis. Cell 10. 137: 773-783.
-
(2009)
Cell
, vol.10
, Issue.137
, pp. 773-783
-
-
Hofius, D.1
Schultz-Larsen, T.2
Joensen, J.3
Tsitsigiannis, D.I.4
Petersen, N.H.5
Mattsson, O.6
Jørgensen, L.B.7
Jones, J.D.8
Mundy, J.9
Petersen, M.10
-
30
-
-
84857758872
-
A new type of compartment, defined by plant-specific Atg8-interacting proteins, is induced upon exposure of Arabidopsis plants to carbon starvation
-
Honig, A., Avin-Wittenberg, T., Ufaz, S., and Galili, G. (2012). A new type of compartment, defined by plant-specific Atg8-interacting proteins, is induced upon exposure of Arabidopsis plants to carbon starvation. Plant Cell 10. 24: 288-303.
-
(2012)
Plant Cell
, vol.10
, Issue.24
, pp. 288-303
-
-
Honig, A.1
Avin-Wittenberg, T.2
Ufaz, S.3
Galili, G.4
-
31
-
-
84864485324
-
Plant peroxisomes: Biogenesis and function
-
Hu, J., Baker, A., Bartel, B., Linka, N., Mullen, R.T., Reumann, S., and Zolman, B.K. (2012). Plant peroxisomes: biogenesis and function. Plant Cell 10. 24: 2279-2303.
-
(2012)
Plant Cell
, vol.10
, Issue.24
, pp. 2279-2303
-
-
Hu, J.1
Baker, A.2
Bartel, B.3
Linka, N.4
Mullen, R.T.5
Reumann, S.6
Zolman, B.K.7
-
32
-
-
84872000271
-
Ultra performance liquid chromatography and high resolution mass spectrometry for the analysis of plant lipids
-
Hummel, J., Segu, S., Li, Y., Irgang, S., Jueppner, J., and Giavalisco, P. (2011). Ultra performance liquid chromatography and high resolution mass spectrometry for the analysis of plant lipids. Front. Plant Sci. 10. 2: 54.
-
(2011)
Front. Plant Sci
, vol.10
, Issue.2
, pp. 54
-
-
Hummel, J.1
Segu, S.2
Li, Y.3
Irgang, S.4
Jueppner, J.5
Giavalisco, P.6
-
33
-
-
84896694834
-
Roles of autophagy in chloroplast recycling
-
Ishida, H., Izumi, M., Wada, S., and Makino, A. (2014). Roles of autophagy in chloroplast recycling. Biochim. Biophys. Acta 10. 1837: 512-521.
-
(2014)
Biochim. Biophys. Acta
, vol.10
, Issue.1837
, pp. 512-521
-
-
Ishida, H.1
Izumi, M.2
Wada, S.3
Makino, A.4
-
34
-
-
84875713765
-
Autophagy contributes to nighttime energy availability for growth in Arabidopsis
-
Izumi, M., Hidema, J., Makino, A., and Ishida, H. (2013). Autophagy contributes to nighttime energy availability for growth in Arabidopsis. Plant Physiol. 10. 161: 1682-1693.
-
(2013)
Plant Physiol
, vol.10
, Issue.161
, pp. 1682-1693
-
-
Izumi, M.1
Hidema, J.2
Makino, A.3
Ishida, H.4
-
35
-
-
84893114070
-
Autophagy-related proteins are required for degradation of peroxisomes in Arabidopsis hypocotyls during seedling growth
-
Kim, J., Lee, H., Lee, H.N., Kim, S.H., Shin, K.D., and Chung, T. (2013). Autophagy-related proteins are required for degradation of peroxisomes in Arabidopsis hypocotyls during seedling growth. Plant Cell 10. 25: 4956-4966.
-
(2013)
Plant Cell
, vol.10
, Issue.25
, pp. 4956-4966
-
-
Kim, J.1
Lee, H.2
Lee, H.N.3
Kim, S.H.4
Shin, K.D.5
Chung, T.6
-
36
-
-
20244380782
-
GMD@CSB.DB: The Golm Metabolome Database
-
Kopka, J., et al. (2005). GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics 10. 21: 1635-1638.
-
(2005)
Bioinformatics
, vol.10
, Issue.21
, pp. 1635-1638
-
-
Kopka, J.1
-
37
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U.K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 10. 227: 680-685.
-
(1970)
Nature
, vol.10
, Issue.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
38
-
-
84865596150
-
Autophagy: A multifaceted intracellular system for bulk and selective recycling
-
Li, F., and Vierstra, R.D. (2012). Autophagy: a multifaceted intracellular system for bulk and selective recycling. Trends Plant Sci. 17: 526-537.
-
(2012)
Trends Plant Sci
, vol.17
, pp. 526-537
-
-
Li, F.1
Vierstra, R.D.2
-
39
-
-
34248580879
-
Gas chromatography mass spectrometry-based metabolite profiling in plants
-
Lisec, J., Schauer, N., Kopka, J., Willmitzer, L., and Fernie, A.R. (2006). Gas chromatography mass spectrometry-based metabolite profiling in plants. Nat. Protoc. 10. 1: 387-396.
-
(2006)
Nat. Protoc
, vol.10
, Issue.1
, pp. 387-396
-
-
Lisec, J.1
Schauer, N.2
Kopka, J.3
Willmitzer, L.4
Fernie, A.R.5
-
40
-
-
84865859612
-
Autophagy: Pathways for selfeating in plant cells
-
Liu, Y., and Bassham, D.C. (2012). Autophagy: pathways for selfeating in plant cells. Annu. Rev. Plant Biol. 10. 63: 215-237.
-
(2012)
Annu. Rev. Plant Biol
, vol.10
, Issue.63
, pp. 215-237
-
-
Liu, Y.1
Bassham, D.C.2
-
41
-
-
70349645984
-
Autophagy is required for tolerance of drought and salt stress in plants
-
Liu, Y., Xiong, Y., and Bassham, D.C. (2009). Autophagy is required for tolerance of drought and salt stress in plants. Autophagy 10. 5: 954-963.
-
(2009)
Autophagy
, vol.10
, Issue.5
, pp. 954-963
-
-
Liu, Y.1
Xiong, Y.2
Bassham, D.C.3
-
42
-
-
19344368318
-
Autophagy regulates programmed cell death during the plant innate immune response
-
Liu, Y., Schiff, M., Czymmek, K., Tallóczy, Z., Levine, B., and Dinesh-Kumar, S.P. (2005). Autophagy regulates programmed cell death during the plant innate immune response. Cell 10. 121: 567-577.
-
(2005)
Cell
, vol.10
, Issue.121
, pp. 567-577
-
-
Liu, Y.1
Schiff, M.2
Czymmek, K.3
Tallóczy, Z.4
Levine, B.5
Dinesh-Kumar, S.P.6
-
43
-
-
40049092920
-
TagFinder for the quantitative analysis of gas chromatography- mass spectrometry (GC-MS)-based metabolite profiling experiments
-
Luedemann, A., Strassburg, K., Erban, A., and Kopka, J. (2008). TagFinder for the quantitative analysis of gas chromatography- mass spectrometry (GC-MS)-based metabolite profiling experiments. Bioinformatics 10. 24: 732-737.
-
(2008)
Bioinformatics
, vol.10
, Issue.24
, pp. 732-737
-
-
Luedemann, A.1
Strassburg, K.2
Erban, A.3
Kopka, J.4
-
44
-
-
84903587970
-
Stitching together the multiple dimensions of autophagy using metabolomics and transcriptomics reveals impacts on metabolism, development, and plant responses to the environment in Arabidopsis
-
Masclaux-Daubresse, C., Clément, G., Anne, P., Routaboul, J.M., Guiboileau, A., Soulay, F., Shirasu, K., and Yoshimoto, K. (2014). Stitching together the multiple dimensions of autophagy using metabolomics and transcriptomics reveals impacts on metabolism, development, and plant responses to the environment in Arabidopsis. Plant Cell 10. 26: 1857-1877.
-
(2014)
Plant Cell
, vol.10
, Issue.26
, pp. 1857-1877
-
-
Masclaux-Daubresse, C.1
Clément, G.2
Anne, P.3
Routaboul, J.M.4
Guiboileau, A.5
Soulay, F.6
Shirasu, K.7
Yoshimoto, K.8
-
45
-
-
84899795253
-
Involvement of autophagy in the direct ER to vacuole protein trafficking route in plants
-
Michaeli, S., Avin-Wittenberg, T., and Galili, G. (2014). Involvement of autophagy in the direct ER to vacuole protein trafficking route in plants. Front. Plant Sci. 10. 5: 134.
-
(2014)
Front. Plant Sci
, vol.10
, Issue.5
, pp. 134
-
-
Michaeli, S.1
Avin-Wittenberg, T.2
Galili, G.3
-
46
-
-
80054025654
-
The role of Atg proteins in autophagosome formation
-
Mizushima, N., Yoshimori, T., and Ohsumi, Y. (2011). The role of Atg proteins in autophagosome formation. Annu. Rev. Cell Dev. Biol. 10. 27: 107-132.
-
(2011)
Annu. Rev. Cell Dev. Biol
, vol.10
, Issue.27
, pp. 107-132
-
-
Mizushima, N.1
Yoshimori, T.2
Ohsumi, Y.3
-
47
-
-
67649877980
-
Metabolomics-oriented isolation and structure elucidation of 37 compounds including two anthocyanins from Arabidopsis thaliana
-
Nakabayashi, R., Kusano, M., Kobayashi, M., Tohge, T., Yonekura- Sakakibara, K., Kogure, N., Yamazaki, M., Kitajima, M., Saito, K., and Takayama, H. (2009). Metabolomics-oriented isolation and structure elucidation of 37 compounds including two anthocyanins from Arabidopsis thaliana. Phytochemistry 10. 70: 1017-1029.
-
(2009)
Phytochemistry
, vol.10
, Issue.70
, pp. 1017-1029
-
-
Nakabayashi, R.1
Kusano, M.2
Kobayashi, M.3
Tohge, T.4
Yonekura-Sakakibara, K.5
Kogure, N.6
Yamazaki, M.7
Kitajima, M.8
Saito, K.9
Takayama, H.10
-
48
-
-
19044378856
-
Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants
-
Nunes-Nesi, A., Carrari, F., Lytovchenko, A., Smith, A.M., Loureiro, M.E., Ratcliffe, R.G., Sweetlove, L.J., and Fernie, A.R. (2005). Enhanced photosynthetic performance and growth as a consequence of decreasing mitochondrial malate dehydrogenase activity in transgenic tomato plants. Plant Physiol. 10. 137: 611-622.
-
(2005)
Plant Physiol
, vol.10
, Issue.137
, pp. 611-622
-
-
Nunes-Nesi, A.1
Carrari, F.2
Lytovchenko, A.3
Smith, A.M.4
Loureiro, M.E.5
Ratcliffe, R.G.6
Sweetlove, L.J.7
Fernie, A.R.8
-
49
-
-
24744441497
-
Autophagy is required for maintenance of amino acid levels and protein synthesis under nitrogen starvation
-
Onodera, J., and Ohsumi, Y. (2005). Autophagy is required for maintenance of amino acid levels and protein synthesis under nitrogen starvation. J. Biol. Chem. 10. 280: 31582-31586.
-
(2005)
J. Biol. Chem
, vol.10
, Issue.280
, pp. 31582-31586
-
-
Onodera, J.1
Ohsumi, Y.2
-
50
-
-
45149130031
-
The ATG12-conjugating enzyme ATG10 Is essential for autophagic vesicle formation in Arabidopsis thaliana
-
Phillips, A.R., Suttangkakul, A., and Vierstra, R.D. (2008). The ATG12-conjugating enzyme ATG10 Is essential for autophagic vesicle formation in Arabidopsis thaliana. Genetics 10. 178: 1339- 1353.
-
(2008)
Genetics
, vol.10
, Issue.178
, pp. 1339-1353
-
-
Phillips, A.R.1
Suttangkakul, A.2
Vierstra, R.D.3
-
51
-
-
0036736285
-
Germination and storage reserve mobilization are regulated independently in Arabidopsis
-
Pritchard, S.L., Charlton, W.L., Baker, A., and Graham, I.A. (2002). Germination and storage reserve mobilization are regulated independently in Arabidopsis. Plant J. 10. 31: 639-647.
-
(2002)
Plant J
, vol.10
, Issue.31
, pp. 639-647
-
-
Pritchard, S.L.1
Charlton, W.L.2
Baker, A.3
Graham, I.A.4
-
52
-
-
5244272023
-
Pathways of glucose dissimilation in carrot slices
-
Rees, T.A., and Beevers, H. (1960). Pathways of glucose dissimilation in carrot slices. Plant Physiol. 10. 35: 830-838.
-
(1960)
Plant Physiol
, vol.10
, Issue.35
, pp. 830-838
-
-
Rees, T.A.1
Beevers, H.2
-
53
-
-
84878562770
-
Autophagic processes in yeast: Mechanism, machinery and regulation
-
Reggiori, F., and Klionsky, D.J. (2013). Autophagic processes in yeast: mechanism, machinery and regulation. Genetics 10. 194: 341-361.
-
(2013)
Genetics
, vol.10
, Issue.194
, pp. 341-361
-
-
Reggiori, F.1
Klionsky, D.J.2
-
54
-
-
78649497797
-
From signal transduction to autophagy of plant cell organelles: Lessons from yeast and mammals and plant-specific features
-
Reumann, S., Voitsekhovskaja, O., and Lillo, C. (2010). From signal transduction to autophagy of plant cell organelles: lessons from yeast and mammals and plant-specific features. Protoplasma 10. 247: 233-256.
-
(2010)
Protoplasma
, vol.10
, Issue.247
, pp. 233-256
-
-
Reumann, S.1
Voitsekhovskaja, O.2
Lillo, C.3
-
55
-
-
4143116713
-
Kinetics of labelling of organic and amino acids in potato tubers by gas chromatographymass spectrometry following incubation in (13)C labelled isotopes
-
Roessner-Tunali, U., Liu, J., Leisse, A., Balbo, I., Perez-Melis, A., Willmitzer, L., and Fernie, A.R. (2004). Kinetics of labelling of organic and amino acids in potato tubers by gas chromatographymass spectrometry following incubation in (13)C labelled isotopes. Plant J. 10. 39: 668-679.
-
(2004)
Plant J
, vol.10
, Issue.39
, pp. 668-679
-
-
Roessner-Tunali, U.1
Liu, J.2
Leisse, A.3
Balbo, I.4
Perez-Melis, A.5
Willmitzer, L.6
Fernie, A.R.7
-
56
-
-
0141787875
-
Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development
-
Roessner-Tunali, U., Hegemann, B., Lytovchenko, A., Carrari, F., Bruedigam, C., Granot, D., and Fernie, A.R. (2003). Metabolic profiling of transgenic tomato plants overexpressing hexokinase reveals that the influence of hexose phosphorylation diminishes during fruit development. Plant Physiol. 10. 133: 84-99.
-
(2003)
Plant Physiol
, vol.10
, Issue.133
, pp. 84-99
-
-
Roessner-Tunali, U.1
Hegemann, B.2
Lytovchenko, A.3
Carrari, F.4
Bruedigam, C.5
Granot, D.6
Fernie, A.R.7
-
57
-
-
33644786913
-
The Arabidopsis thaliana multifunctional protein gene (MFP2) of peroxisomal beta-oxidation is essential for seedling establishment
-
Rylott, E.L., Eastmond, P.J., Gilday, A.D., Slocombe, S.P., Larson, T.R., Baker, A., and Graham, I.A. (2006). The Arabidopsis thaliana multifunctional protein gene (MFP2) of peroxisomal beta-oxidation is essential for seedling establishment. The Plant journal: for cell and molecular biology 10. 45, 930-941.
-
(2006)
The Plant journal: For cell and molecular biology
, vol.10
, Issue.45
, pp. 930-941
-
-
Rylott, E.L.1
Eastmond, P.J.2
Gilday, A.D.3
Slocombe, S.P.4
Larson, T.R.5
Baker, A.6
Graham, I.A.7
-
58
-
-
84893675756
-
Autophagy: A critical regulator of cellular metabolism and homeostasis
-
Ryter, S.W., Cloonan, S.M., and Choi, A.M. (2013). Autophagy: a critical regulator of cellular metabolism and homeostasis. Mol. Cells 10. 36: 7-16.
-
(2013)
Mol. Cells
, vol.10
, Issue.36
, pp. 7-16
-
-
Ryter, S.W.1
Cloonan, S.M.2
Choi, A.M.3
-
59
-
-
84863205849
-
NIH Image to ImageJ: 25 years of image analysis
-
Schneider, C.A., Rasband, W.S., and Eliceiri, K.W. (2012). NIH Image to ImageJ: 25 years of image analysis. Nat. Methods 10. 9: 671-675.
-
(2012)
Nat. Methods
, vol.10
, Issue.9
, pp. 671-675
-
-
Schneider, C.A.1
Rasband, W.S.2
Eliceiri, K.W.3
-
60
-
-
79955631150
-
Autophagy in the cellular energetic balance
-
Singh, R., and Cuervo, A.M. (2011). Autophagy in the cellular energetic balance. Cell Metab. 10. 13: 495-504.
-
(2011)
Cell Metab
, vol.10
, Issue.13
, pp. 495-504
-
-
Singh, R.1
Cuervo, A.M.2
-
61
-
-
27144491614
-
The autophagyassociated Atg8 gene family operates both under favourable growth conditions and under starvation stresses in Arabidopsis plants
-
Sláviková, S., Shy, G., Yao, Y., Glozman, R., Levanony, H., Pietrokovski, S., Elazar, Z., and Galili, G. (2005). The autophagyassociated Atg8 gene family operates both under favourable growth conditions and under starvation stresses in Arabidopsis plants. J. Exp. Bot. 10. 56: 2839-2849.
-
(2005)
J. Exp. Bot
, vol.10
, Issue.56
, pp. 2839-2849
-
-
Sláviková, S.1
Shy, G.2
Yao, Y.3
Glozman, R.4
Levanony, H.5
Pietrokovski, S.6
Elazar, Z.7
Galili, G.8
-
62
-
-
36249013143
-
Reduced expression of succinylcoenzyme A ligase can be compensated for by up-regulation of the gamma-aminobutyrate shunt in illuminated tomato leaves
-
Studart-Guimarães, C., Fait, A., Nunes-Nesi, A., Carrari, F., Usadel, B., and Fernie, A.R. (2007). Reduced expression of succinylcoenzyme A ligase can be compensated for by up-regulation of the gamma-aminobutyrate shunt in illuminated tomato leaves. Plant Physiol. 145: 626-639.
-
(2007)
Plant Physiol
, vol.145
, pp. 626-639
-
-
Studart-Guimarães, C.1
Fait, A.2
Nunes-Nesi, A.3
Carrari, F.4
Usadel, B.5
Fernie, A.R.6
-
63
-
-
84870817220
-
Decreasing the mitochondrial synthesis of malate in potato tubers does not affect plastidial starch synthesis, suggesting that the physiological regulation of ADPglucose pyrophosphorylase is context dependent
-
Szecowka, M., Osorio, S., Obata, T., Araújo, W.L., Rohrmann, J., Nunes-Nesi, A., and Fernie, A.R. (2012). Decreasing the mitochondrial synthesis of malate in potato tubers does not affect plastidial starch synthesis, suggesting that the physiological regulation of ADPglucose pyrophosphorylase is context dependent. Plant Physiol. 10. 160: 2227-2238.
-
(2012)
Plant Physiol
, vol.10
, Issue.160
, pp. 2227-2238
-
-
Szecowka, M.1
Osorio, S.2
Obata, T.3
Araújo, W.L.4
Rohrmann, J.5
Nunes-Nesi, A.6
Fernie, A.R.7
-
64
-
-
33644594726
-
Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathways
-
Thompson, A.R., Doelling, J.H., Suttangkakul, A., and Vierstra, R.D. (2005). Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathways. Plant Physiol. 10. 138: 2097-2110.
-
(2005)
Plant Physiol
, vol.10
, Issue.138
, pp. 2097-2110
-
-
Thompson, A.R.1
Doelling, J.H.2
Suttangkakul, A.3
Vierstra, R.D.4
-
65
-
-
33744504174
-
Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde
-
Tieman, D., Taylor, M., Schauer, N., Fernie, A.R., Hanson, A.D., and Klee, H.J. (2006). Tomato aromatic amino acid decarboxylases participate in synthesis of the flavor volatiles 2-phenylethanol and 2-phenylacetaldehyde. Proc. Natl. Acad. Sci. USA 10. 103: 8287- 8292.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.10
, Issue.103
, pp. 8287-8292
-
-
Tieman, D.1
Taylor, M.2
Schauer, N.3
Fernie, A.R.4
Hanson, A.D.5
Klee, H.J.6
-
66
-
-
34247598751
-
Phytochemical genomics in Arabidopsis thaliana: A case study for functional identification of flavonoid biosynthesis genes
-
Tohge, T., Yonekura-Sakakibara, K., Niida, R., Watanabe- Takahashi, A., and Saito, K. (2007). Phytochemical genomics in Arabidopsis thaliana: A case study for functional identification of flavonoid biosynthesis genes. Pure Appl. Chem. 10. 79: 811-823.
-
(2007)
Pure Appl. Chem
, vol.10
, Issue.79
, pp. 811-823
-
-
Tohge, T.1
Yonekura-Sakakibara, K.2
Niida, R.3
Watanabe-Takahashi, A.4
Saito, K.5
-
67
-
-
34249776060
-
Phosphorylation of the 12 S globulin cruciferin in wild-type and abi1-1 mutant Arabidopsis thaliana (thale cress) seeds
-
Wan, L., Ross, A.R., Yang, J., Hegedus, D.D., and Kermode, A.R. (2007). Phosphorylation of the 12 S globulin cruciferin in wild-type and abi1-1 mutant Arabidopsis thaliana (thale cress) seeds. Biochem. J. 10. 404: 247-256.
-
(2007)
Biochem. J
, vol.10
, Issue.404
, pp. 247-256
-
-
Wan, L.1
Ross, A.R.2
Yang, J.3
Hegedus, D.D.4
Kermode, A.R.5
-
68
-
-
84878240552
-
Autophagy contributes to leaf starch degradation
-
Wang, Y., Yu, B., Zhao, J., Guo, J., Li, Y., Han, S., Huang, L., Du, Y., Hong, Y., Tang, D., and Liu, Y. (2013). Autophagy contributes to leaf starch degradation. Plant Cell 10. 25: 1383-1399.
-
(2013)
Plant Cell
, vol.10
, Issue.25
, pp. 1383-1399
-
-
Wang, Y.1
Yu, B.2
Zhao, J.3
Guo, J.4
Li, Y.5
Han, S.6
Huang, L.7
Du, Y.8
Hong, Y.9
Tang, D.10
Liu, Y.11
-
69
-
-
84879704115
-
Comprehensive dissection of spatiotemporal metabolic shifts in primary, secondary, and lipid metabolism during developmental senescence in Arabidopsis
-
Watanabe, M., Balazadeh, S., Tohge, T., Erban, A., Giavalisco, P., Kopka, J., Mueller-Roeber, B., Fernie, A.R., and Hoefgen, R. (2013). Comprehensive dissection of spatiotemporal metabolic shifts in primary, secondary, and lipid metabolism during developmental senescence in Arabidopsis. Plant Physiol. 10. 162: 1290- 1310.
-
(2013)
Plant Physiol
, vol.10
, Issue.162
, pp. 1290-1310
-
-
Watanabe, M.1
Balazadeh, S.2
Tohge, T.3
Erban, A.4
Giavalisco, P.5
Kopka, J.6
Mueller-Roeber, B.7
Fernie, A.R.8
Hoefgen, R.9
-
70
-
-
0037199955
-
Profiling membrane lipids in plant stress responses
-
Welti, R., Li, W., Li, M., Sang, Y., Biesiada, H., Zhou, H.E., Rajashekar, C.B., Williams, T.D., and Wang, X. (2002). Profiling membrane lipids in plant stress responses. Role of phospholipase D alpha in freezing-induced lipid changes in Arabidopsis. J. Biol. Chem. 10. 277: 31994-32002.
-
(2002)
Role of phospholipase D alpha in freezing-induced lipid changes in Arabidopsis. J. Biol. Chem
, vol.10
, Issue.277
, pp. 31994-32002
-
-
Welti, R.1
Li, W.2
Li, M.3
Sang, Y.4
Biesiada, H.5
Zhou, H.E.6
Rajashekar, C.B.7
Williams, T.D.8
Wang, X.9
-
71
-
-
19444366819
-
AtATG18a is required for the formation of autophagosomes during nutrient stress and senescence in Arabidopsis thaliana
-
Xiong, Y., Contento, A.L., and Bassham, D.C. (2005). AtATG18a is required for the formation of autophagosomes during nutrient stress and senescence in Arabidopsis thaliana. Plant J. 10. 42: 535-546.
-
(2005)
Plant J
, vol.10
, Issue.42
, pp. 535-546
-
-
Xiong, Y.1
Contento, A.L.2
Bassham, D.C.3
-
72
-
-
33846378524
-
Degradation of oxidized proteins by autophagy during oxidative stress in Arabidopsis
-
Xiong, Y., Contento, A.L., Nguyen, P.Q., and Bassham, D.C. (2007). Degradation of oxidized proteins by autophagy during oxidative stress in Arabidopsis. Plant Physiol. 10. 143: 291-299.
-
(2007)
Plant Physiol
, vol.10
, Issue.143
, pp. 291-299
-
-
Xiong, Y.1
Contento, A.L.2
Nguyen, P.Q.3
Bassham, D.C.4
-
73
-
-
14744268915
-
Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy
-
Yoshimoto, K., Hanaoka, H., Sato, S., Kato, T., Tabata, S., Noda, T., and Ohsumi, Y. (2004). Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy. Plant Cell 10. 16: 2967-2983.
-
(2004)
Plant Cell
, vol.10
, Issue.16
, pp. 2967-2983
-
-
Yoshimoto, K.1
Hanaoka, H.2
Sato, S.3
Kato, T.4
Tabata, S.5
Noda, T.6
Ohsumi, Y.7
-
74
-
-
70849127320
-
Autophagy negatively regulates cell death by controlling NPR1-dependent salicylic acid signaling during senescence and the innate immune response in Arabidopsis
-
Yoshimoto, K., Jikumaru, Y., Kamiya, Y., Kusano, M., Consonni, C., Panstruga, R., Ohsumi, Y., and Shirasu, K. (2009). Autophagy negatively regulates cell death by controlling NPR1-dependent salicylic acid signaling during senescence and the innate immune response in Arabidopsis. Plant Cell 10. 21: 2914-2927.
-
(2009)
Plant Cell
, vol.10
, Issue.21
, pp. 2914-2927
-
-
Yoshimoto, K.1
Jikumaru, Y.2
Kamiya, Y.3
Kusano, M.4
Consonni, C.5
Panstruga, R.6
Ohsumi, Y.7
Shirasu, K.8
-
75
-
-
84903365485
-
Organ-specific quality control of plant peroxisomes is mediated by autophagy
-
Yoshimoto, K., Shibata, M., Kondo, M., Oikawa, K., Sato, M., Toyooka, K., Shirasu, K., Nishimura, M., and Ohsumi, Y. (2014). Organ-specific quality control of plant peroxisomes is mediated by autophagy. J. Cell Sci. 10. 127: 1161-1168.
-
(2014)
J. Cell Sci
, vol.10
, Issue.127
, pp. 1161-1168
-
-
Yoshimoto, K.1
Shibata, M.2
Kondo, M.3
Oikawa, K.4
Sato, M.5
Toyooka, K.6
Shirasu, K.7
Nishimura, M.8
Ohsumi, Y.9
|