-
1
-
-
24144459117
-
Base stacking controls excitedstate dynamics in A-T DNA
-
Crespo-Hernandez, C. E., Cohen, B. & Kohler, B. Base stacking controls excitedstate dynamics in A-T DNA. Nature 436, 1141 (2005).
-
(2005)
Nature
, vol.436
, pp. 1141
-
-
Crespo-Hernandez, C.E.1
Cohen, B.2
Kohler, B.3
-
2
-
-
84880533687
-
Monolayer graphene platform for the study of DNA damage by low-energy electron irradiation
-
Sidorov, A. N. & Orlando, T. M. Monolayer Graphene Platform for the Study of DNA Damage by Low-Energy Electron Irradiation. J. Phys. Chem. Lett. 4, 2328 (2013).
-
(2013)
J. Phys. Chem. Lett.
, vol.4
, pp. 2328
-
-
Sidorov, A.N.1
Orlando, T.M.2
-
3
-
-
11844279746
-
On the capturing of low-energy electrons by DNA
-
Ray, S. G., Daube, S. S. & Naaman, R. On the capturing of low-energy electrons by DNA. Proc. Natl. Acad. Sci. U. S. A. 102, 15 (2005).
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 15
-
-
Ray, S.G.1
Daube, S.S.2
Naaman, R.3
-
4
-
-
84892987184
-
Sequence and conformation effects on ionization potential and charge distribution of homo-nucleobase stacks using m06-2x hybrid density functional theory calculations
-
Rooman, M. & Wintjens, R. Sequence and conformation effects on ionization potential and charge distribution of homo-nucleobase stacks using M06-2X hybrid density functional theory calculations. J. Biomol. Struct. Dyn. 32, 532 (2014).
-
(2014)
J. Biomol. Struct. Dyn.
, vol.32
, pp. 532
-
-
Rooman, M.1
Wintjens, R.2
-
5
-
-
79955489694
-
Density functional theory studies of the extent of hole delocalization in one-electron oxidized adenine and guanine base stacks
-
Kumar, A. & Sevilla, M. D. Density Functional Theory Studies of the Extent of Hole Delocalization in One-Electron Oxidized Adenine and Guanine Base Stacks. J. Phys. Chem. B 115, 4990 (2011).
-
(2011)
J. Phys. Chem.
, vol.B 115
, pp. 4990
-
-
Kumar, A.1
Sevilla, M.D.2
-
6
-
-
84881090106
-
Electronic coupling between photo-excited stacked bases in DNA and rna strands with emphasis on the bright states initially populated
-
Nielsen, L. M., Hoffmann, S. V. & Nielsen, S. B. Electronic coupling between photo-excited stacked bases in DNA and RNA strands with emphasis on the bright states initially populated. Photochem. Photobiol. Sci. 12, 1273 (2013).
-
(2013)
Photochem. Photobiol. Sci.
, vol.12
, pp. 1273
-
-
Nielsen, L.M.1
Hoffmann, S.V.2
Nielsen, S.B.3
-
7
-
-
70349247832
-
Dnadamage by low-energy electron impact: Dependence on guanine content
-
Solomun, T., Seitz, H.&Sturm,H.DNADamage by Low-Energy Electron Impact: Dependence on Guanine Content. J. Phys. Chem. B 113, 11557 (2009).
-
(2009)
J. Phys. Chem.
, vol.B 113
, pp. 11557
-
-
Solomun, T.1
Seitz, H.2
Sturm, H.3
-
8
-
-
77951050251
-
Low-energy electron-induced DNA damage: Effect of base sequence in oligonucleotide trimers
-
Li, Z. J., Cloutier, P., Sanche, L. & Wagner, J. R. Low-Energy Electron-Induced DNA Damage: Effect of Base Sequence in Oligonucleotide Trimers. J. Amer. Chem. Soc. 132, 5422 (2010).
-
(2010)
J. Amer. Chem. Soc.
, vol.132
, pp. 5422
-
-
Li, Z.J.1
Cloutier, P.2
Sanche, L.3
Wagner, J.4
-
9
-
-
34248681271
-
Production of low-energy electrons by ionizing radiation
-
Pimblott, Simon, M. & LaVerne, Jay A. Production of low-energy electrons by ionizing radiation. Radiat. Phys. Chem. 76, 1244 (2007).
-
(2007)
Radiat. Phys. Chem.
, vol.76
, pp. 1244
-
-
Pimblott Simon, M.1
Laverne Jay, A.2
-
10
-
-
0038188968
-
Resonant formation of DNA strand breaks by low-energy (3 to 20 ev) electrons
-
Boudaiffa, B. et al. Resonant formation of DNA strand breaks by low-energy (3 to 20 eV) electrons. Science 287, 1658 (2000).
-
(2000)
Science
, vol.287
, pp. 1658
-
-
Boudaiffa, B.1
-
11
-
-
0347997323
-
Single, double, and multiple double strand breaks induced in DNA by 3-100 ev electrons
-
Huels, M. A. et al. Single, double, and multiple double strand breaks induced in DNA by 3-100 eV electrons. J. Amer. Chem. Soc. 125, 4467 (2003).
-
(2003)
J. Amer. Chem. Soc.
, vol.125
, pp. 4467
-
-
Huels, M.A.1
-
12
-
-
80054102226
-
Electron-induced damage of DNA and its components: Experiments and theoretical models
-
Baccarelli, I. et al. Electron-induced damage of DNA and its components: Experiments and theoretical models. Phys. Rep.-Rev. Sec. Phys. Lett. 508, 1 (2011).
-
(2011)
Phys. Rep.-Rev. Sec. Phys. Lett.
, vol.508
, pp. 1
-
-
Baccarelli, I.1
-
13
-
-
51949116241
-
On the effect of low-energy electron induced DNA strand break in aqueous solution: A theoretical study indicating guanine as a weak link in DNA
-
Schyman, P. & Laaksonen, A. On the effect of low-energy electron induced DNA strand break in aqueous solution: A theoretical study indicating guanine as a weak link in DNA. J. Amer. Chem. Soc. 130, 12254 (2008).
-
(2008)
J. Amer. Chem. Soc.
, vol.130
, pp. 12254
-
-
Schyman, P.1
Laaksonen, A.2
-
14
-
-
33746900402
-
Ab initio study of the ionization of the DNA bases: Ionization potentials and excited states of the cations
-
Cauët, E., Dehareng, D. & Liévin, J. Ab initio study of the ionization of the DNA bases: Ionization potentials and excited states of the cations. J. Phys. Chem. A 110, 9200 (2006).
-
(2006)
J. Phys. Chem.
, vol.A 110
, pp. 9200
-
-
Cauët, E.1
Dehareng, D.2
Liévin, J.3
-
15
-
-
78549274348
-
Cooperative effect in the electronic properties of human telomere sequence
-
Markus, T. Z. Daube, S. S. & Naaman, R. Cooperative Effect in the Electronic Properties of Human Telomere Sequence. J. Phys. Chem. B 114, 13897 (2010).
-
(2010)
J. Phys. Chem.
, vol.B 114
, pp. 13897
-
-
Markus, T.Z.1
Daube, S.S.2
Naaman, R.3
-
16
-
-
81555222788
-
Emilie unique hole-trapping property of the human telomere sequence
-
Cauët, Emilie Unique Hole-Trapping Property of the Human Telomere Sequence. J. Biomol. Struct. Dyn. 29, 557 (2011).
-
(2011)
J. Biomol. Struct. Dyn.
, vol.29
, pp. 557
-
-
Cauët1
-
17
-
-
84864647669
-
Probing electron-induced bond cleavage at the single-molecule level using DNA origami templates
-
Keller, A. et al. Probing Electron-Induced Bond Cleavage at the Single-Molecule Level Using DNA Origami Templates. ACS Nano 6, 4392 (2012).
-
(2012)
ACS Nano
, vol.6
, pp. 4392
-
-
Keller, A.1
-
18
-
-
84883415926
-
Electron-induced damage of biotin studied in the gas phase and in the condensed phase at a single-molecule level
-
Keller, A., Kopyra, J., Gothelf, K. V. & Bald, I. Electron-induced damage of biotin studied in the gas phase and in the condensed phase at a single-molecule level. New J. Phys. 15, 083045 (2013).
-
(2013)
New J. Phys.
, vol.15
, pp. 083045
-
-
Keller, A.1
Kopyra, J.2
Gothelf, K.V.3
Bald, I.4
-
19
-
-
84907105009
-
Molecular processes studied at a single-molecule level using DNA origami nanostructures and atomic force microscopy
-
Bald, I. & Keller, A. Molecular Processes Studied at a Single-Molecule Level Using DNA Origami Nanostructures and Atomic Force Microscopy. Molecules 19, 13803 (2014).
-
(2014)
Molecules
, vol.19
, pp. 13803
-
-
Bald, I.1
Keller, A.2
-
20
-
-
84869183843
-
Precursors of solvated electrons in radiobiological physics and chemistry
-
Alizadeh, E. & Sanche, L. Precursors of Solvated Electrons in Radiobiological Physics and Chemistry. Chem. Rev. 112, 5578 (2012).
-
(2012)
Chem. Rev.
, vol.112
, pp. 5578
-
-
Alizadeh, E.1
Sanche, L.2
-
21
-
-
0347385168
-
Cross section calculations for electron scattering from DNA and rna bases
-
Mozejko, P. & Sanche, L. Cross section calculations for electron scattering from DNA and RNA bases. Rad. Environ. Bioph. 42, 201 (2003).
-
(2003)
Rad. Environ. Bioph.
, vol.42
, pp. 201
-
-
Mozejko, P.1
Sanche, L.2
-
22
-
-
84875432441
-
Electron impact total ionization cross sections for all the components of DNA and rna molecule
-
Vinodkumar, M. et al. Electron impact total ionization cross sections for all the components of DNA and RNA molecule. Int. J. Mass Spectrom. 339, 16 (2013).
-
(2013)
Int. J. Mass Spectrom.
, vol.339
, pp. 16
-
-
Vinodkumar, M.1
-
23
-
-
59349111075
-
On the absolute value for the cross-section of dissociative electron attachment (dea) to the DNA base thymine
-
Kopyra, J., Koenig-Lehmann, C. & Illenberger, E. On the absolute value for the cross-section of dissociative electron attachment (DEA) to the DNA base thymine. Int. J. Mass Spectrom. 281, 89 (2009).
-
(2009)
Int. J. Mass Spectrom.
, vol.281
, pp. 89
-
-
Kopyra, J.1
Koenig-Lehmann, C.2
Illenberger, E.3
-
24
-
-
84923334190
-
Elastic and inelastic cross sections for low-energy electron collisions with pyrimidine
-
Masin, Z. et al. Elastic and inelastic cross sections for low-energy electron collisions with pyrimidine. J. Chem. Phys. 136, 14 (2012).
-
(2012)
J. Chem. Phys.
, vol.136
, pp. 14
-
-
Masin, Z.1
-
25
-
-
79955369761
-
Electron impact catalytic dissociation: Two-bond breaking by a low-energy catalytic electron
-
Davis, D., Vysotskiy, V. P., Sajeev, Y. & Cederbaum, L. S. Electron Impact Catalytic Dissociation: Two-Bond Breaking by a Low-Energy Catalytic Electron. Angew. Chem. Int. Ed. 50, 4119 (2011).
-
(2011)
Angew. Chem. Int. Ed.
, vol.50
, pp. 4119
-
-
Davis, D.1
Vysotskiy, V.P.2
Sajeev, Y.3
Cederbaum, L.4
-
26
-
-
54249156351
-
Probing biomolecules by laser-induced acoustic desorption: Electrons at near zero electron volts trigger sugar-phosphate cleavage
-
Bald, I., Dabkowska, I. & Illenberger, E. Probing Biomolecules by Laser-Induced Acoustic Desorption: Electrons at Near Zero Electron Volts Trigger Sugar-Phosphate Cleavage. Angew. Chem. Int. Ed. 47, 8518 (2008).
-
(2008)
Angew. Chem. Int. Ed.
, vol.47
, pp. 8518
-
-
Bald, I.1
Dabkowska, I.2
Illenberger, E.3
-
27
-
-
84883136364
-
Electron-Attachment-induced DNA damage: Instantaneous strand breaks
-
Cauët, E. et al. Electron-Attachment-Induced DNA Damage: Instantaneous Strand Breaks. J. Phys. Chem. B 117, 9669 (2013).
-
(2013)
J. Phys. Chem.
, vol.B 117
, pp. 9669
-
-
Cauët, E.1
-
28
-
-
0036201409
-
Cross sections for low-energy (10-50 ev) electron damage to DNA
-
Boudaiffa, B. et al. Cross sections for low-energy (10-50 eV) electron damage to DNA. Radiat. Res. 157, 227 (2002).
-
(2002)
Radiat. Res.
, vol.157
, pp. 227
-
-
Boudaiffa, B.1
-
29
-
-
33645465675
-
Effective cross sections for production of single-strand breaks in plasmid DNA by 0.1 to 4.7 ev electrons
-
Panajotovic, R. et al. Effective cross sections for production of single-strand breaks in plasmid DNA by 0.1 to 4.7 eV electrons. Radiat. Res. 165, 452 (2006).
-
(2006)
Radiat. Res.
, vol.165
, pp. 452
-
-
Panajotovic, R.1
-
30
-
-
84882245594
-
Absolute cross section for loss of supercoiled topology induced by 10 ev electrons in highly uniform/dna/1,3-diaminopropane films deposited on highly ordered pyrolitic graphite
-
Boulanouar, O. et al. Absolute cross section for loss of supercoiled topology induced by 10 eV electrons in highly uniform/DNA/1,3-diaminopropane films deposited on highly ordered pyrolitic graphite. J. Chem. Phys. 139, 5 (2013)
-
(2013)
J. Chem. Phys.
, vol.139
, pp. 5
-
-
Boulanouar, O.1
-
31
-
-
33645326510
-
Nature of base stacking: Reference quantum-chemical stacking energies in ten unique b-dna base-pair steps
-
Sponer, J. et al. Nature of base stacking: Reference quantum-chemical stacking energies in ten unique B-DNA base-pair steps. Chem. Eur. J. 12, 2854 (2006).
-
(2006)
Chem. Eur. J.
, vol.12
, pp. 2854
-
-
Sponer, J.1
-
32
-
-
79955822409
-
Effect of introducing thymine spacers into an adenine strand: Electronic decoupling?
-
Nielsen, L. M.,Holm,A. I. S., Hoffmann, S. V.&Nielsen, S. B. Effect of introducing thymine spacers into an adenine strand: Electronic decoupling? J. Photochem. Photobiol. A-Chem. 220, 1 (2011).
-
(2011)
J. Photochem. Photobiol. A-Chem.
, vol.220
, pp. 1
-
-
Nielsen, L.M.1
Holm, A.I.S.2
Hoffmann, S.V.3
Nielsen, S.B.4
-
33
-
-
84865124447
-
Fundamental mechanisms of DNA radiosensitization: Damage induced by low-energy electrons in brominated oligonucleotide trimers
-
Park, Y. et al. Fundamental Mechanisms of DNA Radiosensitization: Damage Induced by Low-Energy Electrons in Brominated Oligonucleotide Trimers. J. Phys. Chem. B 116, 9676 (2012).
-
(2012)
J. Phys. Chem.
, vol.B 116
, pp. 9676
-
-
Park, Y.1
-
34
-
-
0023264520
-
Enhancement of xray-induced DNA damage by pretreatment with halogenated pyrimidine analogs
-
Kinsella, T. J., Dobson, P. P., Mitchell, J. B. & Fornace, A. J. Enhancement of XRay-Induced DNA Damage by Pretreatment with Halogenated Pyrimidine Analogs. Int. J. Radiat. Oncol. Biol. Phys. 13, 733 (1987).
-
(1987)
Int. J. Radiat. Oncol. Biol. Phys.
, vol.13
, pp. 733
-
-
Kinsella, T.J.1
Dobson, P.P.2
Mitchell, J.B.3
Fornace, A.J.4
-
35
-
-
0024371774
-
Mechanism of radiosensitization by halogenated pyrimidines-Effect of brdu on radiation induction of DNA-And chromosome-damage and its correlation with cell killing
-
Iliakis, G., Kurtzman, S., Pantelias, G. & Okayasu, R. Mechanism of Radiosensitization by Halogenated Pyrimidines-Effect of BrdU on Radiation Induction of DNA-And Chromosome-Damage and its Correlation with Cell Killing. Radiat. Res. 119, 286 (1989).
-
(1989)
Radiat. Res.
, vol.119
, pp. 286
-
-
Iliakis, G.1
Kurtzman, S.2
Pantelias, G.3
Okayasu, R.4
-
36
-
-
9244238138
-
Single-strand-specific radiosensitization of DNA by bromodeoxyuridine
-
Cecchini, S. et al. Single-strand-specific radiosensitization of DNA by bromodeoxyuridine. Radiat. Res. 162, 604 (2004).
-
(2004)
Radiat. Res.
, vol.162
, pp. 604
-
-
Cecchini, S.1
-
37
-
-
0034806725
-
Sensitizing DNA to secondary electron damage: Resonant formation of oxidative radicals from 5-halouracils
-
Abdoul-Carime, H., Huels, M. A., Illenberger, E. & Sanche, L. Sensitizing DNA to Secondary Electron Damage: Resonant Formation of Oxidative Radicals from 5-Halouracils. J. Amer. Chem. Soc. 123, 5354 (2001).
-
(2001)
J. Amer. Chem. Soc.
, vol.123
, pp. 5354
-
-
Abdoul-Carime, H.1
Huels, M.A.2
Illenberger, E.3
Sanche, L.4
-
38
-
-
77958510350
-
Molecular mechanism of thedna sequence selectivity of 5-halo-29-deoxyuridines as potential radiosensitizers
-
Wang, C. R. & Lu,Q. B.Molecular Mechanism of theDNA Sequence Selectivity of 5-Halo-29-Deoxyuridines as Potential Radiosensitizers. J. Amer. Chem. Soc. 132, 14710 (2010).
-
(2010)
J. Amer. Chem. Soc.
, vol.132
, pp. 14710
-
-
Wang, C.R.1
Lu, Q.2
-
39
-
-
81555200647
-
Low-energy electron-induced damage in a trinucleotide containing 5-bromouracil
-
Li, Z. J., Cloutier, P., Sanche, L. & Wagner, J. R. Low-Energy Electron-Induced Damage in a Trinucleotide Containing 5-Bromouracil. J. Phys. Chem. B 115, 13668 (2011).
-
(2011)
J. Phys. Chem.
, vol.B 115
, pp. 13668
-
-
Li, Z.J.1
Cloutier, P.2
Sanche, L.3
Wagner, J.R.4
-
40
-
-
84892594064
-
On the role of fluoro-substituted nucleosides in DNAradiosensitization for tumor radiation therapy
-
Kopyra, J., Keller, A. & Bald, I. On the role of fluoro-substituted nucleosides in DNAradiosensitization for tumor radiation therapy. RscAdvances 4, 6825 (2014).
-
(2014)
RscAdvances
, vol.4
, pp. 6825
-
-
Kopyra, J.1
Keller, A.2
Bald, I.3
-
41
-
-
84896369621
-
Electron induced single strand break and cyclization: Adft study on the radiosensitization mechanism of the nucleotide of 8-bromoguanine
-
Chomicz, L., Furmanchuk, A., Leszczynski, J. & Rak, J. Electron induced single strand break and cyclization: aDFT study on the radiosensitization mechanism of the nucleotide of 8-bromoguanine. Phys. Chem. Chem. Phys. 16, 6568 (2014).
-
(2014)
Phys. Chem. Chem. Phys.
, vol.16
, pp. 6568
-
-
Chomicz, L.1
Furmanchuk, A.2
Leszczynski, J.3
Rak, J.4
-
42
-
-
33645028600
-
Folding DNA to create nanoscale shapes and patterns
-
Rothemund, P. W. K. Folding DNA to create nanoscale shapes and patterns. Nature 440, 297 (2006).
-
(2006)
Nature
, vol.440
, pp. 297
-
-
Rothemund, P.W.K.1
-
43
-
-
33750559983
-
Semiempirical gga-type density functional constructed with a longrange dispersion correction
-
Grimme, S. Semiempirical GGA-type density functional constructed with a longrange dispersion correction. J. Comput. Chem. 27, 1787 (2006).
-
(2006)
J. Comput. Chem.
, vol.27
, pp. 1787
-
-
Grimme, S.1
-
44
-
-
25044455217
-
Mp2 energy evaluation by direct methods
-
Headgordon, M., Pople, J. A. & Frisch, M. J. MP2 Energy Evaluation by Direct Methods. Chem. Phys. Lett. 153, 503 (1988).
-
(1988)
Chem. Phys. Lett.
, vol.153
, pp. 503
-
-
Headgordon, M.1
Pople, J.A.2
Frisch, M.J.3
-
45
-
-
36149016819
-
New method for calculating 1-particle greens function with application to electron-gas problem
-
Hedin, L. New Method for Calculating 1-Particle Greens Function with Application to Electron-Gas Problem. Phys. Rev. 139, A796 (1965).
-
(1965)
Phys. Rev.
, vol.139
, pp. A796
-
-
Hedin, L.1
-
46
-
-
25544479230
-
Electron correlation in semiconductors and insulators-Band gaps and quasi-particle energies
-
Hybertsen, M. S. & Louie, S. G. Electron Correlation in Semiconductors and Insulators-Band Gaps and Quasi-Particle Energies. Phys. Rev. B 34, 5390 (1986).
-
(1986)
Phys. Rev.
, vol.B 34
, pp. 5390
-
-
Hybertsen, M.S.1
Louie, S.G.2
-
47
-
-
70149102016
-
Ab initio molecular simulations with numeric atom-centered orbitals
-
Blum, V. et al. Ab initio molecular simulations with numeric atom-centered orbitals. Comput. Phys. Commun. 180, 2175 (2009).
-
(2009)
Comput. Phys. Commun.
, vol.180
, pp. 2175
-
-
Blum, V.1
-
48
-
-
84864627603
-
Strategy for finding a reliable starting point for g(0)w(0) demonstrated for molecules
-
Korzdorfer, T. & Marom, N. Strategy for finding a reliable starting point for G(0)W(0) demonstrated for molecules. Phys. Rev. B 86, 041110 (2012).
-
(2012)
Phys. Rev. B
, vol.86
, pp. 041110
-
-
Korzdorfer, T.1
Marom, N.2
|