-
1
-
-
49449094873
-
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita
-
Abad P., Gouzy J., Aury J.-M., et al. Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nat. Biotechnol. 2008, 26:909-915.
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 909-915
-
-
Abad, P.1
Gouzy, J.2
Aury, J.-M.3
-
2
-
-
18744382506
-
ProtTest: selection of best-fit models of protein evolution
-
Abascal F., Zardoya R., Posada D. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 2005, 21:2104-2105.
-
(2005)
Bioinformatics
, vol.21
, pp. 2104-2105
-
-
Abascal, F.1
Zardoya, R.2
Posada, D.3
-
3
-
-
33846298046
-
Molecular diagnostic key for identification of single juveniles of seven common and economically important species of root-knot nematode (Meloidogyne spp.)
-
Adam M.A.M., Phillips M.S., Blok V.C. Molecular diagnostic key for identification of single juveniles of seven common and economically important species of root-knot nematode (Meloidogyne spp.). Plant Pathol. 2007, 56:190-197.
-
(2007)
Plant Pathol.
, vol.56
, pp. 190-197
-
-
Adam, M.A.M.1
Phillips, M.S.2
Blok, V.C.3
-
4
-
-
0033978501
-
A multipartite mitochondrial genome in the potato cyst nematode Globodera pallida
-
Armstrong M.R., Blok V.C., Phillips M.S. A multipartite mitochondrial genome in the potato cyst nematode Globodera pallida. Genetics 2000, 154:181-192.
-
(2000)
Genetics
, vol.154
, pp. 181-192
-
-
Armstrong, M.R.1
Blok, V.C.2
Phillips, M.S.3
-
5
-
-
0033555906
-
Tandem repeats finder: a program to analyze DNA sequences
-
Benson G. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 1999, 27:573-580.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 573-580
-
-
Benson, G.1
-
6
-
-
84883454605
-
MITOS: improved de novo metazoan mitochondrial genome annotation
-
Bernt M., Donath A., Jühling F., et al. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol. Phylogenet. Evol. 2013, 69:313-319.
-
(2013)
Mol. Phylogenet. Evol.
, vol.69
, pp. 313-319
-
-
Bernt, M.1
Donath, A.2
Jühling, F.3
-
7
-
-
84901196584
-
Fast assembly of the mitochondrial genome of a plant parasitic nematode (Meloidogyne graminicola) using next generation sequencing
-
Besnard G., Jühling F., Chapuis É., et al. Fast assembly of the mitochondrial genome of a plant parasitic nematode (Meloidogyne graminicola) using next generation sequencing. C. R. Biol. 2014, 337:295-301.
-
(2014)
C. R. Biol.
, vol.337
, pp. 295-301
-
-
Besnard, G.1
Jühling, F.2
Chapuis, É.3
-
8
-
-
0031773261
-
Substitution bias, rapid saturation, and the use of mtDNA for nematode systematics
-
Blouin M.S., Yowell C.A., Courtney C.H., Dame J.B. Substitution bias, rapid saturation, and the use of mtDNA for nematode systematics. Mol. Biol. Evol. 1998, 15:1719-1727.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 1719-1727
-
-
Blouin, M.S.1
Yowell, C.A.2
Courtney, C.H.3
Dame, J.B.4
-
9
-
-
0001298772
-
The duplication/random loss model for gene rearrangement exemplified by mitochondrial genomes of deuterostome animals
-
Springer Netherlands, Dordrecht, D. Sankoff, J.H. Nadeau (Eds.) Comparative Genomics
-
Boore J.L. The duplication/random loss model for gene rearrangement exemplified by mitochondrial genomes of deuterostome animals. Computational Biology 2000, 133-147. Springer Netherlands, Dordrecht. D. Sankoff, J.H. Nadeau (Eds.).
-
(2000)
Computational Biology
, pp. 133-147
-
-
Boore, J.L.1
-
10
-
-
84871383715
-
Meloidogyne enterolobii (= M. mayaguensis): profile of an emerging, highly pathogenic, root-knot nematode species
-
Castagnone-Sereno P. Meloidogyne enterolobii (= M. mayaguensis): profile of an emerging, highly pathogenic, root-knot nematode species. Nematology 2012, 14:133-138.
-
(2012)
Nematology
, vol.14
, pp. 133-138
-
-
Castagnone-Sereno, P.1
-
11
-
-
77958131330
-
Genome-wide survey and analysis of microsatellites in nematodes, with a focus on the plant-parasitic species Meloidogyne incognita
-
Castagnone-Sereno P., Danchin E.G.J., Deleury E., Guillemaud T., Malausa T., Abad P. Genome-wide survey and analysis of microsatellites in nematodes, with a focus on the plant-parasitic species Meloidogyne incognita. BMC Genomics 2010, 11:598.
-
(2010)
BMC Genomics
, vol.11
, pp. 598
-
-
Castagnone-Sereno, P.1
Danchin, E.G.J.2
Deleury, E.3
Guillemaud, T.4
Malausa, T.5
Abad, P.6
-
12
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana J. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 2000, 17:540-552.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
13
-
-
0019151476
-
Convergence and minimal mutation criteria for evaluating early events in tRNA evolution
-
Cedergren R.J., LaRue B., Sankoff D., Lapalme G., Grosjean H. Convergence and minimal mutation criteria for evaluating early events in tRNA evolution. Proc. Natl. Acad. Sci. U. S. A. 1980, 77:2791-2795.
-
(1980)
Proc. Natl. Acad. Sci. U. S. A.
, vol.77
, pp. 2791-2795
-
-
Cedergren, R.J.1
LaRue, B.2
Sankoff, D.3
Lapalme, G.4
Grosjean, H.5
-
14
-
-
84883463817
-
Species-specific DNA markers for identification of two root-knot nematodes of coffee: Meloidogyne arabicida and M. izalcoensis
-
Correa V.R., dos Santos M.F.A., Almeida M.R.A., Peixoto J.R., Castagnone-Sereno P., Carneiro R.M.D.G. Species-specific DNA markers for identification of two root-knot nematodes of coffee: Meloidogyne arabicida and M. izalcoensis. Eur. J. Plant Pathol. 2013, 137:305-313.
-
(2013)
Eur. J. Plant Pathol.
, vol.137
, pp. 305-313
-
-
Correa, V.R.1
dos Santos, M.F.A.2
Almeida, M.R.A.3
Peixoto, J.R.4
Castagnone-Sereno, P.5
Carneiro, R.M.D.G.6
-
15
-
-
84900351515
-
Genetic diversity of the root-knot nematode Meloidogyne ethiopica and development of a species-specific SCAR marker for its diagnosis
-
Correa V.R., Mattos V.S., Almeida M.R.A., et al. Genetic diversity of the root-knot nematode Meloidogyne ethiopica and development of a species-specific SCAR marker for its diagnosis. Plant Pathol. 2014, 63:476-483.
-
(2014)
Plant Pathol.
, vol.63
, pp. 476-483
-
-
Correa, V.R.1
Mattos, V.S.2
Almeida, M.R.A.3
-
16
-
-
34548701823
-
Structure and classification
-
CAB International, Wallingford, R.N. Perry, M. Moens (Eds.)
-
Decraemer W., Hunt D.J. Structure and classification. Plant Nematology 2006, 3-32. CAB International, Wallingford. R.N. Perry, M. Moens (Eds.).
-
(2006)
Plant Nematology
, pp. 3-32
-
-
Decraemer, W.1
Hunt, D.J.2
-
17
-
-
0002874476
-
Diagnostic characters useful in the identification of the four most common species of root-knot nematodes (Meloidogyne spp.)
-
North Carolina State University Graphics, Raleigh, J.N. Sasser, C.C. Carter (Eds.) An Advanced Treatise on Meloidogyne
-
Eisenback J.D. Diagnostic characters useful in the identification of the four most common species of root-knot nematodes (Meloidogyne spp.). Biology and Control 1985, vol. 1. North Carolina State University Graphics, Raleigh. J.N. Sasser, C.C. Carter (Eds.).
-
(1985)
Biology and Control
, vol.1
-
-
Eisenback, J.D.1
-
18
-
-
84887086067
-
Major emerging problems with minor Meloidogyne species
-
Elling A.A. Major emerging problems with minor Meloidogyne species. Phytopathology 2013, 103:1092-1102.
-
(2013)
Phytopathology
, vol.103
, pp. 1092-1102
-
-
Elling, A.A.1
-
19
-
-
0001840170
-
Isozyme phenotypes for the identification of Meloidogyne species
-
Esbenshade P.R., Triantaphyllou A.C. Isozyme phenotypes for the identification of Meloidogyne species. J. Nematol. 1990, 22:10-15.
-
(1990)
J. Nematol.
, vol.22
, pp. 10-15
-
-
Esbenshade, P.R.1
Triantaphyllou, A.C.2
-
20
-
-
77954034333
-
Crosses prior to parthenogenesis explain the current genetic diversity of tropical plant-parasitic Meloidogyne species (Nematoda: Tylenchida)
-
Fargette M., Berthier K., Richaud M., et al. Crosses prior to parthenogenesis explain the current genetic diversity of tropical plant-parasitic Meloidogyne species (Nematoda: Tylenchida). Infect. Genet. Evol. 2009, 10:806-813.
-
(2009)
Infect. Genet. Evol.
, vol.10
, pp. 806-813
-
-
Fargette, M.1
Berthier, K.2
Richaud, M.3
-
21
-
-
76849091113
-
Panmictic structure of the genetic diversity of apomictic Meloidogyne nematodes (Nematoda: Tylenchida)
-
Fargette M., Lollier V., Hernandez A., Frutos R. Panmictic structure of the genetic diversity of apomictic Meloidogyne nematodes (Nematoda: Tylenchida). Infect. Genet. Evol. 2010, 10:342-345.
-
(2010)
Infect. Genet. Evol.
, vol.10
, pp. 342-345
-
-
Fargette, M.1
Lollier, V.2
Hernandez, A.3
Frutos, R.4
-
22
-
-
84897371717
-
Comparative analyses of the complete mitochondrial genomes of the two ruminant hookworms Bunostomum trigonocephalum and Bunostomum phlebotomum
-
Gao J.-F., Zhao Q., Liu G.-H., et al. Comparative analyses of the complete mitochondrial genomes of the two ruminant hookworms Bunostomum trigonocephalum and Bunostomum phlebotomum. Gene 2014, 541:92-100.
-
(2014)
Gene
, vol.541
, pp. 92-100
-
-
Gao, J.-F.1
Zhao, Q.2
Liu, G.-H.3
-
23
-
-
84868122848
-
Mitochondrial genome of Angiostrongylus vasorum: comparison with congeners and implications for studying the population genetics and epidemiology of this parasite
-
Gasser R.B., Jabbar A., Mohandas N., et al. Mitochondrial genome of Angiostrongylus vasorum: comparison with congeners and implications for studying the population genetics and epidemiology of this parasite. Infect. Genet. Evol. 2012, 12:1884-1891.
-
(2012)
Infect. Genet. Evol.
, vol.12
, pp. 1884-1891
-
-
Gasser, R.B.1
Jabbar, A.2
Mohandas, N.3
-
24
-
-
34648836102
-
Draft genome of the filarial nematode parasite Brugia malayi
-
Ghedin E., Wang S., Spiro D., et al. Draft genome of the filarial nematode parasite Brugia malayi. Science 2007, 317:1756-1760.
-
(2007)
Science
, vol.317
, pp. 1756-1760
-
-
Ghedin, E.1
Wang, S.2
Spiro, D.3
-
25
-
-
35248882882
-
Sequence and characterization of six mitochondrial subgenomes from Globodera rostochiensis: multipartite structure is conserved among close nematode relatives
-
Gibson T., Blok V.C., Dowton M. Sequence and characterization of six mitochondrial subgenomes from Globodera rostochiensis: multipartite structure is conserved among close nematode relatives. J. Mol. Evol. 2007, 65:308-315.
-
(2007)
J. Mol. Evol.
, vol.65
, pp. 308-315
-
-
Gibson, T.1
Blok, V.C.2
Dowton, M.3
-
26
-
-
79961142382
-
The mitochondrial genome of the soybean cyst nematode, Heterodera glycines
-
Gibson T., Farrugia D., Barrett J., et al. The mitochondrial genome of the soybean cyst nematode, Heterodera glycines. Genome 2011, 54:565-574.
-
(2011)
Genome
, vol.54
, pp. 565-574
-
-
Gibson, T.1
Farrugia, D.2
Barrett, J.3
-
27
-
-
52549130466
-
Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species
-
Gissi C., Iannelli F., Pesole G. Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species. Heredity 2008, 101:301-320.
-
(2008)
Heredity
, vol.101
, pp. 301-320
-
-
Gissi, C.1
Iannelli, F.2
Pesole, G.3
-
28
-
-
80655131258
-
Genetic structure of Xiphinema pachtaicum and X. index populations based on mitochondrial DNA variation
-
Gutiérrez-Gutiérrez C., Castillo P., Cantalapiedra-Navarrete C., Landa B.B., Derycke S., Palomares-Rius J.E. Genetic structure of Xiphinema pachtaicum and X. index populations based on mitochondrial DNA variation. Phytopathology 2011, 101:1168-1175.
-
(2011)
Phytopathology
, vol.101
, pp. 1168-1175
-
-
Gutiérrez-Gutiérrez, C.1
Castillo, P.2
Cantalapiedra-Navarrete, C.3
Landa, B.B.4
Derycke, S.5
Palomares-Rius, J.E.6
-
29
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall T. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. 1999, 41:95-98.
-
(1999)
Nucleic Acids Symp.
, vol.41
, pp. 95-98
-
-
Hall, T.1
-
30
-
-
28244455890
-
The mitochondrial genome of Xiphinema americanum sensu stricto (Nematoda: Enoplea): considerable economization in the length and structural features of encoded genes
-
He Y., Jones J., Armstrong M., Lamberti F., Moens M. The mitochondrial genome of Xiphinema americanum sensu stricto (Nematoda: Enoplea): considerable economization in the length and structural features of encoded genes. J. Mol. Evol. 2005, 61:819-833.
-
(2005)
J. Mol. Evol.
, vol.61
, pp. 819-833
-
-
He, Y.1
Jones, J.2
Armstrong, M.3
Lamberti, F.4
Moens, M.5
-
31
-
-
62249185296
-
Small subunit rDNA-based phylogeny of the Tylenchida sheds light on relationships among some high-impact plant-parasitic nematodes and the evolution of plant feeding
-
Holterman M., Karssen G., van den Elsen S., van Megen H., Bakker J., Helder J. Small subunit rDNA-based phylogeny of the Tylenchida sheds light on relationships among some high-impact plant-parasitic nematodes and the evolution of plant feeding. Phytopathology 2009, 99:227-235.
-
(2009)
Phytopathology
, vol.99
, pp. 227-235
-
-
Holterman, M.1
Karssen, G.2
van den Elsen, S.3
van Megen, H.4
Bakker, J.5
Helder, J.6
-
32
-
-
31344441049
-
Mitochondrial genomes of parasitic nematodes - progress and perspectives
-
Hu M., Gasser R.B. Mitochondrial genomes of parasitic nematodes - progress and perspectives. Trends Parasitol. 2006, 22:78-84.
-
(2006)
Trends Parasitol.
, vol.22
, pp. 78-84
-
-
Hu, M.1
Gasser, R.B.2
-
33
-
-
0036156248
-
The mitochondrial genomes of the human hookworms, Ancylostoma duodenale and Necator americanus (Nematoda: Secernentea)
-
Hu M., Chilton N.B., Gasser R.B. The mitochondrial genomes of the human hookworms, Ancylostoma duodenale and Necator americanus (Nematoda: Secernentea). Int. J. Parasitol. 2002, 32:145-158.
-
(2002)
Int. J. Parasitol.
, vol.32
, pp. 145-158
-
-
Hu, M.1
Chilton, N.B.2
Gasser, R.B.3
-
34
-
-
84899467963
-
Mitochondrial genomes of Meloidogyne chitwoodi and M. incognita (Nematoda: Tylenchina): comparative analysis, gene order and phylogenetic relationships with other nematodes
-
Humphreys-Pereira D.A., Elling A.A. Mitochondrial genomes of Meloidogyne chitwoodi and M. incognita (Nematoda: Tylenchina): comparative analysis, gene order and phylogenetic relationships with other nematodes. Mol. Biochem. Parasitol. 2014, 194:20-32.
-
(2014)
Mol. Biochem. Parasitol.
, vol.194
, pp. 20-32
-
-
Humphreys-Pereira, D.A.1
Elling, A.A.2
-
35
-
-
84899983801
-
Meloidogyne lopezi n. sp. (Nematoda: Meloidogynidae), a new root-knot nematode associated with coffee (Coffea arabica L.) in Costa Rica, its diagnosis and phylogenetic relationship with other coffee-parasitizing Meloidogyne species
-
Humphreys-Pereira D.A., Flores-Chaves L., Gómez M., Salazar L., Gómez-Alpízar L., Elling A.A. Meloidogyne lopezi n. sp. (Nematoda: Meloidogynidae), a new root-knot nematode associated with coffee (Coffea arabica L.) in Costa Rica, its diagnosis and phylogenetic relationship with other coffee-parasitizing Meloidogyne species. Nematology 2014, 16:643-661.
-
(2014)
Nematology
, vol.16
, pp. 643-661
-
-
Humphreys-Pereira, D.A.1
Flores-Chaves, L.2
Gómez, M.3
Salazar, L.4
Gómez-Alpízar, L.5
Elling, A.A.6
-
36
-
-
79955858253
-
Rampant gene rearrangement and haplotype hypervariation among nematode mitochondrial genomes
-
Hyman B.C., Lewis S.C., Tang S., Wu Z. Rampant gene rearrangement and haplotype hypervariation among nematode mitochondrial genomes. Genetica 2011, 139:611-615.
-
(2011)
Genetica
, vol.139
, pp. 611-615
-
-
Hyman, B.C.1
Lewis, S.C.2
Tang, S.3
Wu, Z.4
-
37
-
-
77049117359
-
A unique genetic code change in the mitochondrial genome of the parasitic nematode Radopholus similis
-
Jacob J.E.M., Vanholme B., Van Leeuwen T., Gheysen G. A unique genetic code change in the mitochondrial genome of the parasitic nematode Radopholus similis. BMC Res. Notes 2009, 2:192.
-
(2009)
BMC Res. Notes
, vol.2
, pp. 192
-
-
Jacob, J.E.M.1
Vanholme, B.2
Van Leeuwen, T.3
Gheysen, G.4
-
38
-
-
62749195170
-
The mitochondrial genomes of Ancylostoma caninum and Bunostomum phlebotomum - two hookworms of animal health and zoonotic importance
-
Jex A.R., Waeschenbach A., Hu M., et al. The mitochondrial genomes of Ancylostoma caninum and Bunostomum phlebotomum - two hookworms of animal health and zoonotic importance. BMC Genomics 2009, 10:79.
-
(2009)
BMC Genomics
, vol.10
, pp. 79
-
-
Jex, A.R.1
Waeschenbach, A.2
Hu, M.3
-
39
-
-
77449150558
-
An integrated pipeline for next-generation sequencing and annotation of mitochondrial genomes
-
Jex A.R., Hall R.S., Littlewood D.T.J., Gasser R.B. An integrated pipeline for next-generation sequencing and annotation of mitochondrial genomes. Nucleic Acids Res. 2010, 38:522-533.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 522-533
-
-
Jex, A.R.1
Hall, R.S.2
Littlewood, D.T.J.3
Gasser, R.B.4
-
40
-
-
84887117078
-
Top 10 plant-parasitic nematodes in molecular plant pathology
-
Jones J.T., Haegeman A., Danchin E.G.J., et al. Top 10 plant-parasitic nematodes in molecular plant pathology. Mol. Plant Pathol. 2013, 14:946-961.
-
(2013)
Mol. Plant Pathol.
, vol.14
, pp. 946-961
-
-
Jones, J.T.1
Haegeman, A.2
Danchin, E.G.J.3
-
41
-
-
84890248195
-
Root-knot nematodes
-
CAB International, Wallingford, R.N. Perry, M. Moens (Eds.)
-
Karssen G., Moens M. Root-knot nematodes. Plant Nematology 2006, 59-90. CAB International, Wallingford. R.N. Perry, M. Moens (Eds.).
-
(2006)
Plant Nematology
, pp. 59-90
-
-
Karssen, G.1
Moens, M.2
-
42
-
-
0032169062
-
The mitochondrial genome of Onchocerca volvulus: sequence, structure and phylogenetic analysis
-
Keddie E., Higazi T., Unnasch T. The mitochondrial genome of Onchocerca volvulus: sequence, structure and phylogenetic analysis. Mol. Biochem. Parasitol. 1998, 95:111-127.
-
(1998)
Mol. Biochem. Parasitol.
, vol.95
, pp. 111-127
-
-
Keddie, E.1
Higazi, T.2
Unnasch, T.3
-
43
-
-
84905378445
-
Comparison of two short DNA barcoding loci (COI and COII) and two longer ribosomal DNA genes (SSU & LSU rRNA) for specimen identification among quarantine root-knot nematodes (Meloidogyne spp.) and their close relatives
-
Kiewnick S., Holterman M., van den Elsen S., van Megen H., Frey J., Helder J. Comparison of two short DNA barcoding loci (COI and COII) and two longer ribosomal DNA genes (SSU & LSU rRNA) for specimen identification among quarantine root-knot nematodes (Meloidogyne spp.) and their close relatives. Eur. J. Plant Pathol. 2014, 140:97-110.
-
(2014)
Eur. J. Plant Pathol.
, vol.140
, pp. 97-110
-
-
Kiewnick, S.1
Holterman, M.2
van den Elsen, S.3
van Megen, H.4
Frey, J.5
Helder, J.6
-
44
-
-
13944278871
-
Transfer RNA gene recruitment in mitochondrial DNA
-
Lavrov D.V., Lang B.F. Transfer RNA gene recruitment in mitochondrial DNA. Trends Genet. 2005, 21:129-133.
-
(2005)
Trends Genet.
, vol.21
, pp. 129-133
-
-
Lavrov, D.V.1
Lang, B.F.2
-
45
-
-
44449110554
-
The complete mitochondrial genomes for three Toxocara species of human and animal health significance
-
Li M.-W., Lin R.-Q., Song H.-Q., Wu X.-Y., Zhu X.-Q. The complete mitochondrial genomes for three Toxocara species of human and animal health significance. BMC Genomics 2008, 9:224.
-
(2008)
BMC Genomics
, vol.9
, pp. 224
-
-
Li, M.-W.1
Lin, R.-Q.2
Song, H.-Q.3
Wu, X.-Y.4
Zhu, X.-Q.5
-
46
-
-
84862780067
-
Oesophagostomum dentatum and Oesophagostomum quadrispinulatum: characterization of the complete mitochondrial genome sequences of the two pig nodule worms
-
Lin R.-Q., Liu G.-H., Hu M., et al. Oesophagostomum dentatum and Oesophagostomum quadrispinulatum: characterization of the complete mitochondrial genome sequences of the two pig nodule worms. Exp. Parasitol. 2012, 131:1-7.
-
(2012)
Exp. Parasitol.
, vol.131
, pp. 1-7
-
-
Lin, R.-Q.1
Liu, G.-H.2
Hu, M.3
-
47
-
-
84865812662
-
Characterization of the complete mitochondrial genomes of two whipworms Trichuris ovis and Trichuris discolor (Nematoda: Trichuridae)
-
Liu G.-H., Wang Y., Xu M.-J., et al. Characterization of the complete mitochondrial genomes of two whipworms Trichuris ovis and Trichuris discolor (Nematoda: Trichuridae). Infect. Genet. Evol. 2012, 12:1635-1641.
-
(2012)
Infect. Genet. Evol.
, vol.12
, pp. 1635-1641
-
-
Liu, G.-H.1
Wang, Y.2
Xu, M.-J.3
-
48
-
-
84155195018
-
Comparative analyses of the complete mitochondrial genomes of Ascaris lumbricoides and Ascaris suum from humans and pigs
-
Liu G.-H., Wu C.-Y., Song H.-Q., et al. Comparative analyses of the complete mitochondrial genomes of Ascaris lumbricoides and Ascaris suum from humans and pigs. Gene 2012, 492:110-116.
-
(2012)
Gene
, vol.492
, pp. 110-116
-
-
Liu, G.-H.1
Wu, C.-Y.2
Song, H.-Q.3
-
49
-
-
84879116654
-
The complete mitochondrial genomes of three parasitic nematodes of birds: a unique gene order and insights into nematode phylogeny
-
Liu G.-H., Shao R., Li J.-Y., Zhou D.-H., Li H., Zhu X.-Q. The complete mitochondrial genomes of three parasitic nematodes of birds: a unique gene order and insights into nematode phylogeny. BMC Genomics 2013, 14:414.
-
(2013)
BMC Genomics
, vol.14
, pp. 414
-
-
Liu, G.-H.1
Shao, R.2
Li, J.-Y.3
Zhou, D.-H.4
Li, H.5
Zhu, X.-Q.6
-
50
-
-
47749090587
-
Genetic tests of ancient asexuality in root-knot nematodes reveal recent hybrid origins
-
Lunt D.H. Genetic tests of ancient asexuality in root-knot nematodes reveal recent hybrid origins. BMC Evol. Biol. 2008, 8:194.
-
(2008)
BMC Evol. Biol.
, vol.8
, pp. 194
-
-
Lunt, D.H.1
-
51
-
-
84862757623
-
The complete mitochondrial genome of the rodent intra-arterial nematodes Angiostrongylus cantonensis and Angiostrongylus costaricensis
-
Lv S., Zhang Y., Zhang L., et al. The complete mitochondrial genome of the rodent intra-arterial nematodes Angiostrongylus cantonensis and Angiostrongylus costaricensis. Parasitol. Res. 2012, 111:115-123.
-
(2012)
Parasitol. Res.
, vol.111
, pp. 115-123
-
-
Lv, S.1
Zhang, Y.2
Zhang, L.3
-
53
-
-
84930473008
-
Biometrical, biochemical, and molecular diagnosis of Portuguese Meloidogyne hispanica isolates
-
Maleita C.M., Simões M.J., Egas C., Curtis R.H.C., Abrantes I.M.de O. Biometrical, biochemical, and molecular diagnosis of Portuguese Meloidogyne hispanica isolates. Plant Dis. 2012, 96:865-874.
-
(2012)
Plant Dis.
, vol.96
, pp. 865-874
-
-
Maleita, C.M.1
Simões, M.J.2
Egas, C.3
Curtis, R.H.C.4
Abrantes, I.M.D.O.5
-
54
-
-
84862187635
-
Comparing the mitochondrial genomes of Wolbachia-dependent and independent filarial nematode species
-
McNulty S.N., Mullin A.S., Vaughan J.A., Tkach V.V., Weil G.J., Fischer P.U. Comparing the mitochondrial genomes of Wolbachia-dependent and independent filarial nematode species. BMC Genomics 2012, 13:145.
-
(2012)
BMC Genomics
, vol.13
, pp. 145
-
-
McNulty, S.N.1
Mullin, A.S.2
Vaughan, J.A.3
Tkach, V.V.4
Weil, G.J.5
Fischer, P.U.6
-
55
-
-
84881244917
-
Nematode effector proteins: an emerging paradigm of parasitism
-
Mitchum M.G., Hussey R.S., Baum T.J., et al. Nematode effector proteins: an emerging paradigm of parasitism. New Phytol. 2013, 199:879-894.
-
(2013)
New Phytol.
, vol.199
, pp. 879-894
-
-
Mitchum, M.G.1
Hussey, R.S.2
Baum, T.J.3
-
56
-
-
33748113450
-
The complete mitochondrial genome of the entomopathogenic nematode Steinernema carpocapsae: insights into nematode mitochondrial DNA evolution and phylogeny
-
Montiel R., Lucena M.A., Medeiros J., Simões N. The complete mitochondrial genome of the entomopathogenic nematode Steinernema carpocapsae: insights into nematode mitochondrial DNA evolution and phylogeny. J. Mol. Evol. 2006, 62:211-225.
-
(2006)
J. Mol. Evol.
, vol.62
, pp. 211-225
-
-
Montiel, R.1
Lucena, M.A.2
Medeiros, J.3
Simões, N.4
-
57
-
-
54149092490
-
Sequence and genetic map of Meloidogyne hapla: a compact nematode genome for plant parasitism
-
Opperman C.H., Bird D.M., Williamson V.M., et al. Sequence and genetic map of Meloidogyne hapla: a compact nematode genome for plant parasitism. Proc. Natl. Acad. Sci. U. S. A. 2008, 105:14802-14807.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, pp. 14802-14807
-
-
Opperman, C.H.1
Bird, D.M.2
Williamson, V.M.3
-
58
-
-
84923108432
-
Mitochondrial haplotype-based identification of ethanol-preserved root-knot nematodes from Africa
-
(in press)
-
Pagan C., Coyne D., Carneiro R.M.D.G., et al. Mitochondrial haplotype-based identification of ethanol-preserved root-knot nematodes from Africa. Phytopathology 2015, (in press). 10.1094/PHYTO-08-14-0225-R.
-
(2015)
Phytopathology
-
-
Pagan, C.1
Coyne, D.2
Carneiro, R.M.D.G.3
-
59
-
-
79960977751
-
Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences
-
Park J.-K., Sultana T., Lee S.-H., et al. Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences. BMC Genomics 2011, 12:392.
-
(2011)
BMC Genomics
, vol.12
, pp. 392
-
-
Park, J.-K.1
Sultana, T.2
Lee, S.-H.3
-
60
-
-
42449110933
-
Origin and genetic diversity of Western European populations of the potato cyst nematode (Globodera pallida) inferred from mitochondrial sequences and microsatellite loci
-
Plantard O., Picard D., Valette S., Scurrah M., Grenier E., Mugniéry D. Origin and genetic diversity of Western European populations of the potato cyst nematode (Globodera pallida) inferred from mitochondrial sequences and microsatellite loci. Mol. Ecol. 2008, 17:2208-2218.
-
(2008)
Mol. Ecol.
, vol.17
, pp. 2208-2218
-
-
Plantard, O.1
Picard, D.2
Valette, S.3
Scurrah, M.4
Grenier, E.5
Mugniéry, D.6
-
62
-
-
21144470290
-
A polymerase chain reaction method for identification of five major Meloidogyne species
-
Powers T.O., Harris T.S. A polymerase chain reaction method for identification of five major Meloidogyne species. J. Nematol. 1993, 25:1-6.
-
(1993)
J. Nematol.
, vol.25
, pp. 1-6
-
-
Powers, T.O.1
Harris, T.S.2
-
63
-
-
26944438642
-
Incorporating Molecular Identification of Meloidogyne spp. into a Large-scale Regional Nematode Survey
-
Powers T.O., Mullin P.G., Harris T.S., Sutton L.A., Higgins R.S. Incorporating Molecular Identification of Meloidogyne spp. into a Large-scale Regional Nematode Survey. J. Nematol. 2005, 37:226-235.
-
(2005)
J. Nematol.
, vol.37
, pp. 226-235
-
-
Powers, T.O.1
Mullin, P.G.2
Harris, T.S.3
Sutton, L.A.4
Higgins, R.S.5
-
64
-
-
0036436570
-
Genetic diversity of root-knot nematodes from Brazil and development of SCAR markers specific for the coffee-damaging species
-
Randig O., Bongiovanni M., Carneiro R.M.D.G., Castagnone-Sereno P. Genetic diversity of root-knot nematodes from Brazil and development of SCAR markers specific for the coffee-damaging species. Genome 2002, 45:862-870.
-
(2002)
Genome
, vol.45
, pp. 862-870
-
-
Randig, O.1
Bongiovanni, M.2
Carneiro, R.M.D.G.3
Castagnone-Sereno, P.4
-
65
-
-
84860109324
-
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist F., Teslenko M., van der Mark P., et al. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 2012, 61:539-542.
-
(2012)
Syst. Biol.
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
van der Mark, P.3
-
66
-
-
84893908874
-
Both SSU rDNA and RNA polymerase II data recognise that root-knot nematodes arose from migratory Pratylenchidae, but probably not from one of the economically high-impact lesion nematodes
-
Rybarczyk-Mydłowska K., van Megen H., van den Elsen S., et al. Both SSU rDNA and RNA polymerase II data recognise that root-knot nematodes arose from migratory Pratylenchidae, but probably not from one of the economically high-impact lesion nematodes. Nematology 2014, 16:125-136.
-
(2014)
Nematology
, vol.16
, pp. 125-136
-
-
Rybarczyk-Mydłowska, K.1
van Megen, H.2
van den Elsen, S.3
-
67
-
-
23144460836
-
The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs
-
Schattner P., Brooks A.N., Lowe T.M. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 2005, 33:W686-W689.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. W686-W689
-
-
Schattner, P.1
Brooks, A.N.2
Lowe, T.M.3
-
68
-
-
84899553363
-
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
-
Stamatakis A. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 2014, 30:1312-1313.
-
(2014)
Bioinformatics
, vol.30
, pp. 1312-1313
-
-
Stamatakis, A.1
-
69
-
-
0030975794
-
Nucleotide polymorphisms and an improved PCR-based mtDNA diagnostic for parthenogenetic root-knot nematodes (Meloidogyne spp.)
-
Stanton J., Hugall A., Moritz C. Nucleotide polymorphisms and an improved PCR-based mtDNA diagnostic for parthenogenetic root-knot nematodes (Meloidogyne spp.). Fundam. Appl. Nematol. 1997, 20:261-268.
-
(1997)
Fundam. Appl. Nematol.
, vol.20
, pp. 261-268
-
-
Stanton, J.1
Hugall, A.2
Moritz, C.3
-
70
-
-
84875812722
-
Comparison of complete mitochondrial genomes of pine wilt nematode Bursaphelenchus xylophilus and Bursaphelenchus mucronatus (Nematoda: Aphelenchoidea) and development of a molecular tool for species identification
-
Sultana T., Han H., Park J.-K. Comparison of complete mitochondrial genomes of pine wilt nematode Bursaphelenchus xylophilus and Bursaphelenchus mucronatus (Nematoda: Aphelenchoidea) and development of a molecular tool for species identification. Gene 2013, 520:39-46.
-
(2013)
Gene
, vol.520
, pp. 39-46
-
-
Sultana, T.1
Han, H.2
Park, J.-K.3
-
71
-
-
84872347385
-
Comparative analysis of complete mitochondrial genome sequences confirms independent origins of plant-parasitic nematodes
-
Sultana T., Kim J., Lee S.-H., et al. Comparative analysis of complete mitochondrial genome sequences confirms independent origins of plant-parasitic nematodes. BMC Evol. Biol. 2013, 13:12.
-
(2013)
BMC Evol. Biol.
, vol.13
, pp. 12
-
-
Sultana, T.1
Kim, J.2
Lee, S.-H.3
-
72
-
-
84902513599
-
The complete mitochondrial genome of Meloidogyne graminicola (Tylenchina): a unique gene arrangement and its phylogenetic implications
-
Sun L., Zhuo K., Lin B., Wang H., Liao J. The complete mitochondrial genome of Meloidogyne graminicola (Tylenchina): a unique gene arrangement and its phylogenetic implications. PLoS ONE 2014, 9:e98558.
-
(2014)
PLoS ONE
, vol.9
, pp. e98558
-
-
Sun, L.1
Zhuo, K.2
Lin, B.3
Wang, H.4
Liao, J.5
-
73
-
-
34547489084
-
Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
-
Talavera G., Castresana J. Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Syst. Biol. 2007, 56:564-577.
-
(2007)
Syst. Biol.
, vol.56
, pp. 564-577
-
-
Talavera, G.1
Castresana, J.2
-
74
-
-
84890330527
-
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0
-
Tamura K., Stecher G., Peterson D., Filipski A., Kumar S. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol. Biol. Evol. 2013, 30:2725-2729.
-
(2013)
Mol. Biol. Evol.
, vol.30
, pp. 2725-2729
-
-
Tamura, K.1
Stecher, G.2
Peterson, D.3
Filipski, A.4
Kumar, S.5
-
75
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994, 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
76
-
-
78149320606
-
Genetic diversity of the root-knot nematode Meloidogyne enterolobii and development of a SCAR marker for this guava-damaging species
-
Tigano M., De Siqueira K., Castagnone-Sereno P., et al. Genetic diversity of the root-knot nematode Meloidogyne enterolobii and development of a SCAR marker for this guava-damaging species. Plant Pathol. 2010, 59:1054-1061.
-
(2010)
Plant Pathol.
, vol.59
, pp. 1054-1061
-
-
Tigano, M.1
De Siqueira, K.2
Castagnone-Sereno, P.3
-
77
-
-
79952004667
-
Gene recruitment - a common mechanism in the evolution of transfer RNA gene families
-
Wang X., Lavrov D.V. Gene recruitment - a common mechanism in the evolution of transfer RNA gene families. Gene 2011, 475:22-29.
-
(2011)
Gene
, vol.475
, pp. 22-29
-
-
Wang, X.1
Lavrov, D.V.2
-
78
-
-
0036324968
-
Ribosomal intergenic spacer: a polymerase chain reaction diagnostic for Meloidogyne chitwoodi, M. fallax, and M. hapla
-
Wishart J., Phillips M.S., Blok V.C. Ribosomal intergenic spacer: a polymerase chain reaction diagnostic for Meloidogyne chitwoodi, M. fallax, and M. hapla. Phytopathology 2002, 92:884-892.
-
(2002)
Phytopathology
, vol.92
, pp. 884-892
-
-
Wishart, J.1
Phillips, M.S.2
Blok, V.C.3
-
79
-
-
84887238210
-
Evolution of the tRNA gene family in mitochondrial genomes of five Meretrix clams (Bivalvia, Veneridae)
-
Wu X., Xiao S., Li X., Li L., Shi W., Yu Z. Evolution of the tRNA gene family in mitochondrial genomes of five Meretrix clams (Bivalvia, Veneridae). Gene 2014, 533:439-446.
-
(2014)
Gene
, vol.533
, pp. 439-446
-
-
Wu, X.1
Xiao, S.2
Li, X.3
Li, L.4
Shi, W.5
Yu, Z.6
-
80
-
-
80055063374
-
The mitochondrial genome of Baylisascaris procyonis
-
Xie Y., Zhang Z., Niu L., et al. The mitochondrial genome of Baylisascaris procyonis. PLoS One 2011, 6:e27066.
-
(2011)
PLoS One
, vol.6
, pp. e27066
-
-
Xie, Y.1
Zhang, Z.2
Niu, L.3
-
81
-
-
79959697512
-
Complete mitochondrial genomes of Baylisascaris schroederi, Baylisascaris ailuri and Baylisascaris transfuga from giant panda, red panda and polar bear
-
Xie Y., Zhang Z., Wang C., et al. Complete mitochondrial genomes of Baylisascaris schroederi, Baylisascaris ailuri and Baylisascaris transfuga from giant panda, red panda and polar bear. Gene 2011, 482:59-67.
-
(2011)
Gene
, vol.482
, pp. 59-67
-
-
Xie, Y.1
Zhang, Z.2
Wang, C.3
-
82
-
-
84897871387
-
Using mitogenomic and nuclear ribosomal sequence data to investigate the phylogeny of the Xiphinema americanum species complex
-
Zasada I.A., Peetz A., Howe D.K., et al. Using mitogenomic and nuclear ribosomal sequence data to investigate the phylogeny of the Xiphinema americanum species complex. PLoS One 2014, 9:e90035.
-
(2014)
PLoS One
, vol.9
, pp. e90035
-
-
Zasada, I.A.1
Peetz, A.2
Howe, D.K.3
-
83
-
-
33750286648
-
A multiplex real-time polymerase chain reaction (TaqMan) assay for the simultaneous detection of Meloidogyne chitwoodi and M. fallax
-
Zijlstra C., Van Hoof R.A. A multiplex real-time polymerase chain reaction (TaqMan) assay for the simultaneous detection of Meloidogyne chitwoodi and M. fallax. Phytopathology 2006, 96:1255-1262.
-
(2006)
Phytopathology
, vol.96
, pp. 1255-1262
-
-
Zijlstra, C.1
Van Hoof, R.A.2
|