Fast assembly of the mitochondrial genome of a plant parasitic nematode (Meloidogyne graminicola) using next generation sequencing

Comptes Rendus - Biologies

Volumn 337, Issue 5, 2014, Pages 295-301

  Besnard, Guillaume ^a   Jühling, Frank ^b   Chapuis, Élodie ^c   Zedane, Loubab ^a   Lhuillier, Émeline ^d   Mateille, Thierry ^e   Bellafiore, Stéphane ^c  

^a Laboratoire Evolution et Diversité Biologique   (France)

^b UNIVERSITY OF LEIPZIG   (Germany)

^c Campus International de Baillarguet   (France)

^d Institut National de la Recherche Agronomique   (France)

^e CENTRE DE BIOLOGIE ET DE GESTION DES POPULATIONS   (France)

Author keywords

Genome skimming; Meloidogyne; Mitogenomics; Nematode; Next generation sequencing; Organellar genome assembly

Indexed keywords

RIBOSOME RNA; TRANSFER RNA; MITOCHONDRIAL DNA;

DNA FINGERPRINTING; GENOME; MITOCHONDRIAL DNA; NEMATODE; PHYLOGENETICS; POPULATION GENETICS;

ARTICLE; ASCARIS SUUM; CAENORHABDITIS ELEGANS; CONSENSUS SEQUENCE; DNA REPLICATION ORIGIN; GENE MAPPING; GENE ORDER; GENE SEQUENCE; INTRASPECIFIC VARIATION; MELOIDOGYNE GRAMINICOLA; MITOCHONDRIAL GENOME; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POPULATION GENETICS; RNA GENE; TANDEM REPEAT; ANIMAL; BIOSYNTHESIS; CHEMISTRY; DNA SEQUENCE; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; TYLENCHOIDEA;

MELOIDOGYNE; MELOIDOGYNE GRAMINICOLA; MELOIDOGYNE HAPLA; MELOIDOGYNE JAVANICA; NEMATODA;

ANIMALS; BASE SEQUENCE; DNA, MITOCHONDRIAL; GENOME, MITOCHONDRIAL; MOLECULAR SEQUENCE DATA; RNA, TRANSFER; SEQUENCE ANALYSIS, DNA; TYLENCHOIDEA;

EID: 84901196584     PISSN: 16310691     EISSN: 17683238     Source Type: Journal    
DOI: 10.1016/j.crvi.2014.03.003     Document Type: Article

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