-
1
-
-
18744382506
-
ProtTest: selection of best-fit models of protein evolution
-
Abascal F., Zardoya R., Posada D. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 2005, 21:2104-2105.
-
(2005)
Bioinformatics
, vol.21
, pp. 2104-2105
-
-
Abascal, F.1
Zardoya, R.2
Posada, D.3
-
2
-
-
0027981455
-
Complete DNA sequence of the mitochondrial genome of the black chiton, Katharina tunicata
-
Boore J.L., Brown W.M. Complete DNA sequence of the mitochondrial genome of the black chiton, Katharina tunicata. Genetics 1994, 138:423-443.
-
(1994)
Genetics
, vol.138
, pp. 423-443
-
-
Boore, J.L.1
Brown, W.M.2
-
3
-
-
74549177042
-
Evolutionary relatedness of mackerels of the genus Scomber based on complete mitochondrial genomes: strong support to the recognition of Atlantic Scomber colias and Pacific Scomber japonicus as distinct species
-
Catanese G., Manchado M., Infante C. Evolutionary relatedness of mackerels of the genus Scomber based on complete mitochondrial genomes: strong support to the recognition of Atlantic Scomber colias and Pacific Scomber japonicus as distinct species. Gene 2010, 452:35-43.
-
(2010)
Gene
, vol.452
, pp. 35-43
-
-
Catanese, G.1
Manchado, M.2
Infante, C.3
-
4
-
-
0033602823
-
Characterization of porcine and ovine Oesophagostomum spp. by isoenzymatic patterns and restriction-fragment-length polymorphisms (RFLPs)
-
Cutillas C., Guevara-Martínez D., Oliveros R., Arias P., Guevara D.C. Characterization of porcine and ovine Oesophagostomum spp. by isoenzymatic patterns and restriction-fragment-length polymorphisms (RFLPs). Acta Tropica 1999, 73:59-71.
-
(1999)
Acta Tropica
, vol.73
, pp. 59-71
-
-
Cutillas, C.1
Guevara-Martínez, D.2
Oliveros, R.3
Arias, P.4
Guevara, D.C.5
-
5
-
-
0033551151
-
Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila and Arabidopsis
-
Durent L., Mouchiroud D. Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila and Arabidopsis. Proceedings of the National academy of Sciences of the United States of America 1999, 96:4482-4487.
-
(1999)
Proceedings of the National academy of Sciences of the United States of America
, vol.96
, pp. 4482-4487
-
-
Durent, L.1
Mouchiroud, D.2
-
6
-
-
34047147107
-
Oesophagostomum dentatum - potential as a model for genomic studies of strongylid nematodes, with biotechnological prospects
-
Gasser R.B., Cottee P., Nisbet A.J., Ruttkowski B., Ranganathan S., Joachim A. Oesophagostomum dentatum - potential as a model for genomic studies of strongylid nematodes, with biotechnological prospects. Biotechnology Advances 2007, 25:281-293.
-
(2007)
Biotechnology Advances
, vol.25
, pp. 281-293
-
-
Gasser, R.B.1
Cottee, P.2
Nisbet, A.J.3
Ruttkowski, B.4
Ranganathan, S.5
Joachim, A.6
-
7
-
-
0034979914
-
Phylogeny of the Trichostrongylina (Nematoda) inferred from 28S rDNA sequences
-
Gou de Bellocq J., Ferté H., Depaquit J., Justine J.L., Tillier A., Durette-Desset M.C. Phylogeny of the Trichostrongylina (Nematoda) inferred from 28S rDNA sequences. Molecular Phylogenetics and Evolution 2001, 19:430-442.
-
(2001)
Molecular Phylogenetics and Evolution
, vol.19
, pp. 430-442
-
-
Gou de Bellocq, J.1
Ferté, H.2
Depaquit, J.3
Justine, J.L.4
Tillier, A.5
Durette-Desset, M.C.6
-
8
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Systematic Biology 2003, 52:696-704.
-
(2003)
Systematic Biology
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
9
-
-
0034882968
-
The complete mitochondrial genome of the articulate brachiopod Terebratalia transversa
-
Helfenbein K.G., Brown W.M., Boore J.L. The complete mitochondrial genome of the articulate brachiopod Terebratalia transversa. Molecular Biology and Evolution 2001, 18:1734-1744.
-
(2001)
Molecular Biology and Evolution
, vol.18
, pp. 1734-1744
-
-
Helfenbein, K.G.1
Brown, W.M.2
Boore, J.L.3
-
10
-
-
0036156248
-
The mitochondrial genomes of the two human hookworms Ancylostoma duodenale and Necator americanus (Nematoda: Secernentea)
-
Hu M., Chilton N.B., Gasser R.B. The mitochondrial genomes of the two human hookworms Ancylostoma duodenale and Necator americanus (Nematoda: Secernentea). International Journal for Parasitology 2002, 32:145-158.
-
(2002)
International Journal for Parasitology
, vol.32
, pp. 145-158
-
-
Hu, M.1
Chilton, N.B.2
Gasser, R.B.3
-
11
-
-
0036693940
-
Long PCR-based amplification and sequencing of the entire mitochondrial genome from parasite nematodes
-
Hu M., Chilton N.B., Gasser R.B. Long PCR-based amplification and sequencing of the entire mitochondrial genome from parasite nematodes. Molecular and Cellular Probes 2002, 16:261-267.
-
(2002)
Molecular and Cellular Probes
, vol.16
, pp. 261-267
-
-
Hu, M.1
Chilton, N.B.2
Gasser, R.B.3
-
12
-
-
0141644142
-
The mitochondrial genome of Strongyloides stercoralis (Nematoda) - idiosyncratic gene order and evolutionary implications
-
Hu M., Chilton N.B., Gasser R.B. The mitochondrial genome of Strongyloides stercoralis (Nematoda) - idiosyncratic gene order and evolutionary implications. International Journal for Parasitology 2003, 33:1393-1408.
-
(2003)
International Journal for Parasitology
, vol.33
, pp. 1393-1408
-
-
Hu, M.1
Chilton, N.B.2
Gasser, R.B.3
-
13
-
-
0037559715
-
Structure and organization of the mitochondrial genome of Dirofilaria immitis
-
Hu M., Gasser R.B., Abs EL-Osta Y.G., Chilton N.B. Structure and organization of the mitochondrial genome of Dirofilaria immitis. Parasitology 2003, 127:37-51.
-
(2003)
Parasitology
, vol.127
, pp. 37-51
-
-
Hu, M.1
Gasser, R.B.2
Abs EL-Osta, Y.G.3
Chilton, N.B.4
-
14
-
-
77449150558
-
An integrated pipeline for next-generation sequencing and annotation of mitochondrial genomes
-
Jex A.R., Hall R.S., Littlewood D.T., Gasser R.B. An integrated pipeline for next-generation sequencing and annotation of mitochondrial genomes. Nucleic Acids Research 2010, 38:522-533.
-
(2010)
Nucleic Acids Research
, vol.38
, pp. 522-533
-
-
Jex, A.R.1
Hall, R.S.2
Littlewood, D.T.3
Gasser, R.B.4
-
15
-
-
0035916956
-
Occurrence of helminthes in pig fattening units with different management systems in Northern Germany
-
Joachim A., Dülmer N., Daugschies A., Roepstorff A. Occurrence of helminthes in pig fattening units with different management systems in Northern Germany. Veterinary Parasitology 2001, 96:135-146.
-
(2001)
Veterinary Parasitology
, vol.96
, pp. 135-146
-
-
Joachim, A.1
Dülmer, N.2
Daugschies, A.3
Roepstorff, A.4
-
16
-
-
0032169062
-
The mitochondrial genome of Onchocerca volvulus: sequence, structure and phylogenetic analysis
-
Keddie E.M., Higazi T., Unnasch T.R. The mitochondrial genome of Onchocerca volvulus: sequence, structure and phylogenetic analysis. Molecular Biochemical Parasitology 1998, 95:111-127.
-
(1998)
Molecular Biochemical Parasitology
, vol.95
, pp. 111-127
-
-
Keddie, E.M.1
Higazi, T.2
Unnasch, T.R.3
-
17
-
-
77950396114
-
Nodular worm infection in wild chimpanzees in Western Uganda: a risk for human health?
-
Krief S., Vermeulen B., Lafosse S., Kasenene J.M., Nieguitsila A., Berthelemy M., L'hostis M., Bain O., Guillot J. Nodular worm infection in wild chimpanzees in Western Uganda: a risk for human health?. PLoS Neglected Tropical Diseases 2010, 4:e630.
-
(2010)
PLoS Neglected Tropical Diseases
, vol.4
-
-
Krief, S.1
Vermeulen, B.2
Lafosse, S.3
Kasenene, J.M.4
Nieguitsila, A.5
Berthelemy, M.6
L'hostis, M.7
Bain, O.8
Guillot, J.9
-
18
-
-
0035109373
-
Trichinella spiralis mtDNA: a nematode mitochondrial genome that encodes a putative ATP8 and normally structured tRNAs and has a gene arrangement relatable to those of coelomate metazoans
-
Lavrov D.V., Brown W.M. Trichinella spiralis mtDNA: a nematode mitochondrial genome that encodes a putative ATP8 and normally structured tRNAs and has a gene arrangement relatable to those of coelomate metazoans. Genetics 2001, 157:621-637.
-
(2001)
Genetics
, vol.157
, pp. 621-637
-
-
Lavrov, D.V.1
Brown, W.M.2
-
19
-
-
1942509449
-
Zoonotic intestinal parasites in Papio anubis (baboon) and Cercopithecus aethiops (vervet) from four localities in Ethiopia
-
Legesse M., Erko B. Zoonotic intestinal parasites in Papio anubis (baboon) and Cercopithecus aethiops (vervet) from four localities in Ethiopia. Acta Tropica 2004, 90:231-236.
-
(2004)
Acta Tropica
, vol.90
, pp. 231-236
-
-
Legesse, M.1
Erko, B.2
-
20
-
-
44449110554
-
The complete mitochondrial genomes for three Toxocara species of human and animal health significance
-
Li M.W., Lin R.Q., Song H.Q., Wu X.Y., Zhu X.Q. The complete mitochondrial genomes for three Toxocara species of human and animal health significance. BMC Genomics 2008, 9:224.
-
(2008)
BMC Genomics
, vol.9
, pp. 224
-
-
Li, M.W.1
Lin, R.Q.2
Song, H.Q.3
Wu, X.Y.4
Zhu, X.Q.5
-
21
-
-
48349100577
-
A multiplex PCR tool for the specific identification of Oesophagostomum spp. from pigs
-
Lin R.Q., Ai L., Zou F.C., Verweij J.J., Jiang Q., Li M.W., Song H.Q., Zhu X.Q. A multiplex PCR tool for the specific identification of Oesophagostomum spp. from pigs. Parasitology Research 2008, 103:993-997.
-
(2008)
Parasitology Research
, vol.103
, pp. 993-997
-
-
Lin, R.Q.1
Ai, L.2
Zou, F.C.3
Verweij, J.J.4
Jiang, Q.5
Li, M.W.6
Song, H.Q.7
Zhu, X.Q.8
-
22
-
-
79955905423
-
Characterization of the complete mitochondrial genomes of five Eimeria species from domestic chickens
-
Lin R.Q., Qiu L.L., Liu G.H., Wu X.Y., Weng Y.B., Xie W.Q., Hou J., Pan H., Yuan Z.G., Zou F.C., Hu M., Zhu X.Q. Characterization of the complete mitochondrial genomes of five Eimeria species from domestic chickens. Gene 2011, 480:28-33.
-
(2011)
Gene
, vol.480
, pp. 28-33
-
-
Lin, R.Q.1
Qiu, L.L.2
Liu, G.H.3
Wu, X.Y.4
Weng, Y.B.5
Xie, W.Q.6
Hou, J.7
Pan, H.8
Yuan, Z.G.9
Zou, F.C.10
Hu, M.11
Zhu, X.Q.12
-
23
-
-
84856036248
-
Contracaecum rudolphii B: gene content, arrangement and composition of its complete mitochondrial genome compared with Anisakis simplex s.l
-
Lin R.Q., Liu G.H., Zhang Y., D'Amelio S., Zhou D.H., Yuan Z.G., Zou F.C., Song H.Q., Zhu X.Q. Contracaecum rudolphii B: gene content, arrangement and composition of its complete mitochondrial genome compared with Anisakis simplex s.l. Experimental Parasitology 2012, 130:135-140.
-
(2012)
Experimental Parasitology
, vol.130
, pp. 135-140
-
-
Lin, R.Q.1
Liu, G.H.2
Zhang, Y.3
D'Amelio, S.4
Zhou, D.H.5
Yuan, Z.G.6
Zou, F.C.7
Song, H.Q.8
Zhu, X.Q.9
-
24
-
-
79955918853
-
The complete mitochondrial genomes of three cestode species of Taenia infecting animals and humans
-
Liu G.H., Lin R.Q., Li M.W., Liu W., Liu Y., Yuan Z.G., Song H.Q., Zhao G.H., Zhang K.X., Zhu X.Q. The complete mitochondrial genomes of three cestode species of Taenia infecting animals and humans. Molecular Biology Reports 2011, 38:2249-2256.
-
(2011)
Molecular Biology Reports
, vol.38
, pp. 2249-2256
-
-
Liu, G.H.1
Lin, R.Q.2
Li, M.W.3
Liu, W.4
Liu, Y.5
Yuan, Z.G.6
Song, H.Q.7
Zhao, G.H.8
Zhang, K.X.9
Zhu, X.Q.10
-
25
-
-
84155195018
-
Comparative analyses of the complete mitochondrial genomes of Ascaris lumbricoides and Ascaris suum from humans and pigs
-
Liu G.H., Wu C.Y., Song H.Q., Wei S.J., Xu M.J., Lin R.Q., Zhao G.H., Huang S.Y., Zhu X.Q. Comparative analyses of the complete mitochondrial genomes of Ascaris lumbricoides and Ascaris suum from humans and pigs. Gene 2012, 492:110-116.
-
(2012)
Gene
, vol.492
, pp. 110-116
-
-
Liu, G.H.1
Wu, C.Y.2
Song, H.Q.3
Wei, S.J.4
Xu, M.J.5
Lin, R.Q.6
Zhao, G.H.7
Huang, S.Y.8
Zhu, X.Q.9
-
26
-
-
0030854739
-
TRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
-
Lowe T.M., Eddy S.R. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Research 1997, 25:955-964.
-
(1997)
Nucleic Acids Research
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
28
-
-
0019444843
-
TRNA punctuation model of RNA processing in human mitochondria
-
Ojala D., Montoya J., Attardi G. tRNA punctuation model of RNA processing in human mitochondria. Nature 1981, 290:470-474.
-
(1981)
Nature
, vol.290
, pp. 470-474
-
-
Ojala, D.1
Montoya, J.2
Attardi, G.3
-
30
-
-
0030203863
-
TREEVIEW: an application to display phylogenetic trees on personal computers
-
Page R.D. TREEVIEW: an application to display phylogenetic trees on personal computers. Computer Applied Bioscience 1996, 12:357-358.
-
(1996)
Computer Applied Bioscience
, vol.12
, pp. 357-358
-
-
Page, R.D.1
-
31
-
-
0034657798
-
Codon usage in Chlamydia trachomatis is the result of strand-specific mutational biases and a complex pattern of selective force
-
Romero H., Zavala A., Musto H. Codon usage in Chlamydia trachomatis is the result of strand-specific mutational biases and a complex pattern of selective force. Nucleic Acids Research 2000, 28:2084-2090.
-
(2000)
Nucleic Acids Research
, vol.28
, pp. 2084-2090
-
-
Romero, H.1
Zavala, A.2
Musto, H.3
-
32
-
-
0041386108
-
MrBayes 3: bayesian phylogenetic inference under mixed models
-
Ronquist F., Huelsenbeck J.P. MrBayes 3: bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
34
-
-
0033745103
-
Nucleotide bias causes a genomewide bias in the amino acid composition of proteins
-
Singer G.A., Hickey D.A. Nucleotide bias causes a genomewide bias in the amino acid composition of proteins. Molecular Biology and Evolution 2000, 17:1581-1588.
-
(2000)
Molecular Biology and Evolution
, vol.17
, pp. 1581-1588
-
-
Singer, G.A.1
Hickey, D.A.2
-
35
-
-
84862827502
-
-
Paup*: Phylogenetic Analysis Using Parsimony, version 4.0b10. Sinauer Associates, Sunderland, MA. 2002.
-
Swofford, D.L., 2002. Paup*: Phylogenetic Analysis Using Parsimony, version 4.0b10. Sinauer Associates, Sunderland, MA. 2002.
-
(2002)
-
-
Swofford, D.L.1
-
36
-
-
34547489084
-
Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
-
Talavera G., Castresana J. Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Systematic Biology 2007, 56:564-577.
-
(2007)
Systematic Biology
, vol.56
, pp. 564-577
-
-
Talavera, G.1
Castresana, J.2
-
37
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 2011, 28:2731-2739.
-
(2011)
Molecular Biology and Evolution
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
38
-
-
0031574072
-
The Clustal X windows interface. Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The Clustal X windows interface. Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 1997, 25:4876-4882.
-
(1997)
Nucleic Acids Research
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
39
-
-
2442592891
-
A single nucleotide polymorphism map of the mitochondrial genome of the parasitic nematode Cooperia oncophora
-
Van der Veer M., de Vries E. A single nucleotide polymorphism map of the mitochondrial genome of the parasitic nematode Cooperia oncophora. Parasitology 2004, 128:421-431.
-
(2004)
Parasitology
, vol.128
, pp. 421-431
-
-
Van der Veer, M.1
de Vries, E.2
-
40
-
-
0034845816
-
Determining the prevalence of Oesophagostomum bifurcum and Necator americanus infections using specific PCR amplification of DNA from faecal samples
-
Verweij J.J., Pit D.S., van Lieshout L., Baeta S.M., Dery G.D., Gasser R.B., Polderman A.M. Determining the prevalence of Oesophagostomum bifurcum and Necator americanus infections using specific PCR amplification of DNA from faecal samples. Tropical Medicine & International Health 2001, 6:726-731.
-
(2001)
Tropical Medicine & International Health
, vol.6
, pp. 726-731
-
-
Verweij, J.J.1
Pit, D.S.2
van Lieshout, L.3
Baeta, S.M.4
Dery, G.D.5
Gasser, R.B.6
Polderman, A.M.7
-
41
-
-
13844294280
-
Survey of intestinal parasites from intensive pig farms in Guangdong Province, People's Republic of China
-
Weng Y.B., Hu Y.J., Li Y., Li B.S., Lin R.Q., Xie D.H., Gasser R.B., Zhu X.Q. Survey of intestinal parasites from intensive pig farms in Guangdong Province, People's Republic of China. Veterinary Parasitology 2005, 127:333-336.
-
(2005)
Veterinary Parasitology
, vol.127
, pp. 333-336
-
-
Weng, Y.B.1
Hu, Y.J.2
Li, Y.3
Li, B.S.4
Lin, R.Q.5
Xie, D.H.6
Gasser, R.B.7
Zhu, X.Q.8
-
42
-
-
0027083319
-
Animal mitochondrial DNA, structure and evolution
-
Wolstenholme D.R. Animal mitochondrial DNA, structure and evolution. International Review of Cytology 1992, 141:173-216.
-
(1992)
International Review of Cytology
, vol.141
, pp. 173-216
-
-
Wolstenholme, D.R.1
-
43
-
-
79959697512
-
Complete mitochondrial genomes of Baylisascaris schroederi, Baylisascaris ailuri and Baylisascaris transfuga from giant panda, red panda and polar bear
-
Xie Y., Zhang Z., Wang C., Lan J., Li Y., Chen Z., Fu Y., Nie H., Yan N., Gu X., Wang S., Peng X., Yang G. Complete mitochondrial genomes of Baylisascaris schroederi, Baylisascaris ailuri and Baylisascaris transfuga from giant panda, red panda and polar bear. Gene 2011, 482:59-67.
-
(2011)
Gene
, vol.482
, pp. 59-67
-
-
Xie, Y.1
Zhang, Z.2
Wang, C.3
Lan, J.4
Li, Y.5
Chen, Z.6
Fu, Y.7
Nie, H.8
Yan, N.9
Gu, X.10
Wang, S.11
Peng, X.12
Yang, G.13
|