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Volumn 6, Issue , 2015, Pages

Imaging single cells in a beam of live cyanobacteria with an X-ray laser

(39)  Van Der Schot, Gijs a   Svenda, Martin a   Maia, Filipe R N C a,b   Hantke, Max a   Deponte, Daniel P c,d   Seibert, M Marvin a,d   Aquila, Andrew c,e   Schulz, Joachim c,e   Kirian, Richard c   Liang, Mengning c   Stellato, Francesco c,f   Iwan, Bianca a   Andreasson, Jakob a   Timneanu, Nicusor a   Westphal, Daniel a   Almeida, F Nunes a   Odic, Dusko a   Hasse, Dirk a   Carlsson, Gunilla H a   Larsson, Daniel S D a   more..

c DESY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CELL ORGANELLE; CYANOBACTERIUM; PARAMETERIZATION; RESOLUTION; X-RAY;

EID: 84923102595     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms6704     Document Type: Article
Times cited : (172)

References (52)
  • 1
    • 67650762824 scopus 로고    scopus 로고
    • Super-resolution fluorescence microscopy
    • Huang, B., Bates, M. & Zhuang, X. Super-resolution fluorescence microscopy. Annu. Rev. Biochem. 78, 993-1016 (2009).
    • (2009) Annu. Rev. Biochem. , vol.78 , pp. 993-1016
    • Huang, B.1    Bates, M.2    Zhuang, X.3
  • 3
    • 13744261676 scopus 로고    scopus 로고
    • X-ray survival characteristics and genetic analysis for nine Saccharomyces deletion mutants that show altered radiation sensitivity
    • Game, J. C., Williamson, M. S. & Baccari, C. X-ray survival characteristics and genetic analysis for nine Saccharomyces deletion mutants that show altered radiation sensitivity. Genetics 169, 51-63 (2005).
    • (2005) Genetics , vol.169 , pp. 51-63
    • Game, J.C.1    Williamson, M.S.2    Baccari, C.3
  • 4
    • 0034680144 scopus 로고    scopus 로고
    • Potential for biomolecular imaging with femtosecond X-ray pulses
    • Neutze, R., Wouts, R., van der Spoel, D., Weckert, E. & Hajdu, J. Potential for biomolecular imaging with femtosecond X-ray pulses. Nature 406, 752-757 (2000).
    • (2000) Nature , vol.406 , pp. 752-757
    • Neutze, R.1    Wouts, R.2    Van Der Spoel, D.3    Weckert, E.4    Hajdu, J.5
  • 5
    • 57649140868 scopus 로고    scopus 로고
    • Feasibility of imaging living cells at subnanometer resolutions by ultrafast X-ray diffraction
    • Bergh, M. et al. Feasibility of imaging living cells at subnanometer resolutions by ultrafast X-ray diffraction. Q. Rev. Biophys. 41, 181-204 (2008).
    • (2008) Q. Rev. Biophys. , vol.41 , pp. 181-204
    • Bergh, M.1
  • 6
    • 0033783987 scopus 로고    scopus 로고
    • Single molecule X-ray diffraction
    • Hajdu, J. Single molecule X-ray diffraction. Curr. Opin. Struct. Biol. 10, 569-573 (2000).
    • (2000) Curr. Opin. Struct. Biol. , vol.10 , pp. 569-573
    • Hajdu, J.1
  • 7
    • 0037422544 scopus 로고    scopus 로고
    • Imaging whole Escherichia coli bacteria by using single-particle x-ray diffraction
    • Miao, J. et al. Imaging whole Escherichia coli bacteria by using single-particle x-ray diffraction. Proc. Natl Acad. Sci. USA 100, 110-112 (2003).
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 110-112
    • Miao, J.1
  • 8
    • 27344443551 scopus 로고    scopus 로고
    • Biological imaging by soft x-ray diffraction microscopy
    • Shapiro, D. et al. Biological imaging by soft x-ray diffraction microscopy. Proc. Natl Acad. Sci. USA 102, 15343-15346 (2005).
    • (2005) Proc. Natl Acad. Sci. USA , vol.102 , pp. 15343-15346
    • Shapiro, D.1
  • 9
    • 77954922551 scopus 로고    scopus 로고
    • Quantitative 3D imaging of whole, unstained cells by using X-ray diffraction microscopy
    • Jiang, H. et al. Quantitative 3D imaging of whole, unstained cells by using X-ray diffraction microscopy. Proc. Natl Acad. Sci. USA 107, 11234-11239 (2010).
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 11234-11239
    • Jiang, H.1
  • 10
    • 84890503524 scopus 로고    scopus 로고
    • Putting molecules in their place
    • Cinquin, B. P. et al. Putting molecules in their place. J. Cell. Biochem. 115, 209-216 (2014).
    • (2014) J. Cell. Biochem. , vol.115 , pp. 209-216
    • Cinquin, B.P.1
  • 11
    • 84874520050 scopus 로고    scopus 로고
    • Imaging fully hydrated whole cells by coherent X-Ray diffraction microscopy
    • Nam, D. et al. Imaging fully hydrated whole cells by coherent X-Ray diffraction microscopy. Phys. Rev. Lett. 110, 098103 (2013).
    • (2013) Phys. Rev. Lett. , vol.110 , pp. 098103
    • Nam, D.1
  • 12
    • 13844266776 scopus 로고    scopus 로고
    • Relaxed averaged alternating reflections for diffraction imaging
    • Luke, D. R. Relaxed averaged alternating reflections for diffraction imaging. Inverse Probl. 21, 37-50 (2005).
    • (2005) Inverse Probl. , vol.21 , pp. 37-50
    • Luke, D.R.1
  • 13
    • 0015327061 scopus 로고
    • Practical algorithm for determination of phase from image and diffraction plane pictures
    • Gerchberg, R. W. & Saxton, W. O. Practical algorithm for determination of phase from image and diffraction plane pictures. Optik 35, 237-246 (1972).
    • (1972) Optik , vol.35 , pp. 237-246
    • Gerchberg, R.W.1    Saxton, W.O.2
  • 14
    • 0017985106 scopus 로고
    • Reconstruction of an object from modulus of Its Fouriertransform
    • Fienup, J. R. Reconstruction of an object from modulus of Its Fouriertransform. Opt. Lett. 3, 27-29 (1978).
    • (1978) Opt. Lett. , vol.3 , pp. 27-29
    • Fienup, J.R.1
  • 15
    • 1842615314 scopus 로고    scopus 로고
    • X-ray omni microscopy
    • Paganin, D. et al. X-ray omni microscopy. J. Microsc. 214, 315-327 (2004).
    • (2004) J. Microsc. , vol.214 , pp. 315-327
    • Paganin, D.1
  • 16
    • 82255167657 scopus 로고    scopus 로고
    • A simple viability analysis for unicellular cyanobacteria using a new autofluorescence assay, automated microscopy, and ImageJ
    • Schulze, K., López, D. A., Tillich, U. M. & Frohme, M. A simple viability analysis for unicellular cyanobacteria using a new autofluorescence assay, automated microscopy, and ImageJ. BMC Biotechnol. 11, 118-125 (2011).
    • (2011) BMC Biotechnol. , vol.11 , pp. 118-125
    • Schulze, K.1    López, D.A.2    Tillich, U.M.3    Frohme, M.4
  • 17
    • 0000214386 scopus 로고    scopus 로고
    • Generic characters of the simplest cyanoprokaryotes Cyanobium Cyanobacterium and Synechococcus
    • Komarek, J., Kopecky, J. & Cepak, V. Generic characters of the simplest cyanoprokaryotes Cyanobium, Cyanobacterium and Synechococcus. Cryptogam.: Algol. 20, 209-222 (1999).
    • (1999) Cryptogam.: Algol. , vol.20 , pp. 209-222
    • Komarek, J.1    Kopecky, J.2    Cepak, V.3
  • 18
    • 0001694261 scopus 로고
    • Fine-structure of Cyanobacteria
    • Cohen-Bazire, G. S. Fine-structure of Cyanobacteria. Methods Enzymol. 167, 157-172 (1988).
    • (1988) Methods Enzymol. , vol.167 , pp. 157-172
    • Cohen-Bazire, G.S.1
  • 19
    • 79551667263 scopus 로고    scopus 로고
    • Single mimivirus particles intercepted and imaged with an X-ray laser
    • Seibert, M. M. et al. Single mimivirus particles intercepted and imaged with an X-ray laser. Nature 470, 78-U86 (2011).
    • (2011) Nature , vol.470 , pp. 78-86
    • Seibert, M.M.1
  • 20
    • 38749088980 scopus 로고    scopus 로고
    • Single particle X-ray diffractive imaging
    • Bogan, M. J. et al. Single particle X-ray diffractive imaging. Nano Lett. 8, 310-316 (2008).
    • (2008) Nano Lett. , vol.8 , pp. 310-316
    • Bogan, M.J.1
  • 21
    • 78249254551 scopus 로고    scopus 로고
    • Femtosecond diffractive imaging of biological cells
    • Seibert, M. M. et al. Femtosecond diffractive imaging of biological cells. J. Phys. B: At., Mol. Opt. Phys. 43, 194015 (2010).
    • (2010) J. Phys. B: At Mol. Opt. Phys. , vol.43 , pp. 194015
    • Seibert, M.M.1
  • 22
    • 84891857629 scopus 로고    scopus 로고
    • Imaging live cell in micro-liquid enclosure by X-ray laser diffraction
    • Kimura, T. et al. Imaging live cell in micro-liquid enclosure by X-ray laser diffraction. Nat. Commun. 5, Article number 3052 (2014).
    • (2014) Nat. Commun. , vol.5
    • Kimura, T.1
  • 23
    • 79955797429 scopus 로고    scopus 로고
    • Production flux of sea spray aerosol
    • de Leeuw, G. et al. Production flux of sea spray aerosol. Rev. Geophys. 49, RG2001 (2011).
    • (2011) Rev. Geophys. , vol.49 , pp. 2001
    • De Leeuw, G.1
  • 24
    • 40549103786 scopus 로고    scopus 로고
    • Bio-electrosprayed multicellular zebrafish embryos are viable and develop normally
    • Clarke, J. D. & Jayasinghe, S. N. Bio-electrosprayed multicellular zebrafish embryos are viable and develop normally. Biomed. Mater. 3, 011001 (2008).
    • (2008) Biomed. Mater. , vol.3 , pp. 011001
    • Clarke, J.D.1    Jayasinghe, S.N.2
  • 26
    • 84869131568 scopus 로고    scopus 로고
    • Printing and prototyping of tissues and scaffolds
    • Derby, B. Printing and prototyping of tissues and scaffolds. Science 338, 921-926 (2012).
    • (2012) Science , vol.338 , pp. 921-926
    • Derby, B.1
  • 27
    • 53449087721 scopus 로고    scopus 로고
    • Gas dynamic virtual nozzle for generation of microscopic droplet streams
    • DePonte, D. P. et al. Gas dynamic virtual nozzle for generation of microscopic droplet streams. J. Phys. D: Appl. Phys. 41, 195505 (2008).
    • (2008) J. Phys. D: Appl. Phys. , vol.41 , pp. 195505
    • Deponte, D.P.1
  • 28
    • 77952355656 scopus 로고    scopus 로고
    • Mechanical properties of mammalian cells in suspension measured by electro-deformation
    • MacQueen, L. A., Buschmann, M. D. & Wertheimer, M. R. Mechanical properties of mammalian cells in suspension measured by electro-deformation. J. Micromech. Microeng. 20, 065007 (2010).
    • (2010) J. Micromech. Microeng. , vol.20 , pp. 065007
    • Macqueen, L.A.1    Buschmann, M.D.2    Wertheimer, M.R.3
  • 29
    • 84870318366 scopus 로고    scopus 로고
    • Drug-eluting fibers for HIV-1 inhibition and contraception
    • Ball, C., Krogstad, E., Chaowanachan, T. & Woodrow, K. A. Drug-eluting fibers for HIV-1 inhibition and contraception. PLoS ONE 7, e49792 (2012).
    • (2012) PLoS ONE , vol.7 , pp. e49792
    • Ball, C.1    Krogstad, E.2    Chaowanachan, T.3    Woodrow, K.A.4
  • 30
    • 0023506119 scopus 로고
    • Flow effects on the viability and lysis of suspended mammalian cells
    • McQueen, A., Meilhoc, E. & Bailey, J. E. Flow effects on the viability and lysis of suspended mammalian cells. Biotechnol. Lett. 9, 831-836 (1987).
    • (1987) Biotechnol. Lett. , vol.9 , pp. 831-836
    • McQueen, A.1    Meilhoc, E.2    Bailey, J.E.3
  • 31
    • 79551658540 scopus 로고    scopus 로고
    • Femtosecond X-ray protein nanocrystallography
    • Chapman, H. N. et al. Femtosecond X-ray protein nanocrystallography. Nature 470, 73-77 (2011).
    • (2011) Nature , vol.470 , pp. 73-77
    • Chapman, H.N.1
  • 33
    • 3142740202 scopus 로고    scopus 로고
    • Terrestrial microorganisms at an altitude of 20,000m in Earth's atmosphere
    • Griffin, D. W. Terrestrial microorganisms at an altitude of 20,000m in Earth's atmosphere. Aerobiologia 20, 135-140 (2004).
    • (2004) Aerobiologia , vol.20 , pp. 135-140
    • Griffin, D.W.1
  • 35
    • 84883159226 scopus 로고    scopus 로고
    • Ultra-fast and ultra-intense x-ray sciences: First results from the linac coherent light source free-electron laser
    • Bostedt, C. et al. Ultra-fast and ultra-intense x-ray sciences: First results from the Linac Coherent Light Source free-electron laser. J. Phys. B 46, 164003 (2013).
    • (2013) J. Phys. B , vol.46 , pp. 164003
    • Bostedt, C.1
  • 36
    • 77956280553 scopus 로고    scopus 로고
    • First lasing and operation of an angstrom-wavelength free-electron laser
    • Emma, P. et al. First lasing and operation of an angstrom-wavelength free-electron laser. Nat. Photonics 4, 641-647 (2010).
    • (2010) Nat. Photonics , vol.4 , pp. 641-647
    • Emma, P.1
  • 37
    • 76749131505 scopus 로고    scopus 로고
    • Large-format, high-speed, X-ray pnCCDs combined with electron and ion imaging spectrometers in a multipurpose chamber for experiments at 4th generation light sources
    • Struder, L. et al. Large-format, high-speed, X-ray pnCCDs combined with electron and ion imaging spectrometers in a multipurpose chamber for experiments at 4th generation light sources. Nucl. Instrum. Methods Phys. Res. Sect. A 614, 483-496 (2010).
    • (2010) Nucl. Instrum. Methods Phys. Res. Sect. A , vol.614 , pp. 483-496
    • Struder, L.1
  • 38
    • 84901819736 scopus 로고    scopus 로고
    • A new resource for processing serial X-ray diffraction data
    • Barty, A. et al. A new resource for processing serial X-ray diffraction data. J. Appl. Cryst. 47, 1118-1131 (2014).
    • (2014) J. Appl. Cryst. , vol.47 , pp. 1118-1131
    • Barty, A.1
  • 39
    • 0041676175 scopus 로고
    • An X-ray study of chymotrypsin and hemoglobin
    • Bernal, J. D. et al. An X-ray study of chymotrypsin and hemoglobin. Nature 141, 523-524 (1938).
    • (1938) Nature , vol.141 , pp. 523-524
    • Bernal, J.D.1
  • 40
    • 0000433073 scopus 로고
    • Some implications of a theorem due to Shannon
    • Sayre, D. Some implications of a theorem due to Shannon. Acta. Crystallogr. 5, 843-843 (1952).
    • (1952) Acta Crystallogr. , vol.5 , pp. 843-843
    • Sayre, D.1
  • 41
    • 0033595278 scopus 로고    scopus 로고
    • Extending the methodology of X-ray crystallography to allow imaging of micrometre-sized non-crystalline specimens
    • Miao, J., Charalambous, P., Kirz, J. & Sayre, D. Extending the methodology of X-ray crystallography to allow imaging of micrometre-sized non-crystalline specimens. Nature 400, 342-344 (1999).
    • (1999) Nature , vol.400 , pp. 342-344
    • Miao, J.1    Charalambous, P.2    Kirz, J.3    Sayre, D.4
  • 42
    • 78649499750 scopus 로고    scopus 로고
    • Hawk: The image reconstruction package for coherent X-ray diffractive imaging
    • Maia, F. R. N. C. et al. Hawk: The image reconstruction package for coherent X-ray diffractive imaging. J. Appl. Crystallogr. 43, 1535-1539 (2010).
    • (2010) J. Appl. Crystallogr. , vol.43 , pp. 1535-1539
    • Maia, F.R.N.C.1
  • 43
    • 33745245608 scopus 로고    scopus 로고
    • High-resolution ab initio three-dimensional x-ray diffraction microscopy
    • Chapman, H. N. et al. High-resolution ab initio three-dimensional x-ray diffraction microscopy. J. Opt. Soc. Am. A 23, 1179 (2006).
    • (2006) J. Opt. Soc. Am. A , vol.23 , pp. 1179
    • Chapman, H.N.1
  • 44
    • 33845186032 scopus 로고    scopus 로고
    • Femtosecond diffractive imaging with a soft-X-ray free-electron laser
    • Chapman, H. N. et al. Femtosecond diffractive imaging with a soft-X-ray free-electron laser. Nat. Phys. 2, 839-843 (2006).
    • (2006) Nat. Phys. , vol.2 , pp. 839-843
    • Chapman, H.N.1
  • 45
    • 68449091494 scopus 로고    scopus 로고
    • Signal-to-noise and radiation exposure considerations in conventional and diffraction x-ray microscopy
    • Huang, X. et al. Signal-to-noise and radiation exposure considerations in conventional and diffraction x-ray microscopy. Opt Express 17, 13541-13553 (2009).
    • (2009) Opt Express , vol.17 , pp. 13541-13553
    • Huang, X.1
  • 46
    • 62049084227 scopus 로고    scopus 로고
    • An assessment of the resolution limitation due to radiationdamage in x-ray diffraction microscopy
    • Howels, M. R. et al. An assessment of the resolution limitation due to radiationdamage in x-ray diffraction microscopy. J. Electron Spectrosc. Rel. Phenom. 170, 4-12 (2009).
    • (2009) J. Electron Spectrosc. Rel. Phenom. , vol.170 , pp. 4-12
    • Howels, M.R.1
  • 47
    • 77952170185 scopus 로고    scopus 로고
    • High-resolution x-ray diffraction microscopy of specifically labeled yeast cells
    • Nelson, J. et al. High-resolution x-ray diffraction microscopy of specifically labeled yeast cells. Proc. Natl Acad. Sci. USA 107, 7235-7239 (2010).
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 7235-7239
    • Nelson, J.1
  • 48
    • 1842592892 scopus 로고    scopus 로고
    • Phase retrieval from the magnitude of the Fourier transforms of nonperiodic objects
    • Miao, J., Sayre, D. & Chapman, H. N. Phase retrieval from the magnitude of the Fourier transforms of nonperiodic objects. J. Opt. Soc. Am. A 15, 1662-1669 (1998).
    • (1998) J. Opt. Soc. Am. A , vol.15 , pp. 1662-1669
    • Miao, J.1    Sayre, D.2    Chapman, H.N.3
  • 49
    • 84863113728 scopus 로고    scopus 로고
    • CASS-CFEL-ASG software suite
    • Foucar, L. et al. CASS-CFEL-ASG software suite. Comput. Phys. Commun. 183, 2207-2213 (2012).
    • (2012) Comput. Phys. Commun. , vol.183 , pp. 2207-2213
    • Foucar, L.1
  • 50
    • 1642602232 scopus 로고    scopus 로고
    • X-ray image reconstruction from a diffraction pattern alone
    • Marchesini, S. et al. X-ray image reconstruction from a diffraction pattern alone. Phys. Rev. B: Condens. Matter Mater. Phys. 68, 140101 (2003).
    • (2003) Phys. Rev. B: Condens. Matter Mater. Phys. , vol.68 , pp. 140101
    • Marchesini, S.1
  • 51
    • 0000825481 scopus 로고
    • A statistical method for evaluating systematic relationships
    • Sokal, R. & Michener, C. A statistical method for evaluating systematic relationships. Univ. Kans. Sci. Bull. 38, 1409-1438 (1958).
    • (1958) Univ. Kans. Sci. Bull. , vol.38 , pp. 1409-1438
    • Sokal, R.1    Michener, C.2
  • 52
    • 34547812032 scopus 로고    scopus 로고
    • Femtosecond time-delay x-ray holography
    • Chapman, H. N. et al. Femtosecond Time-Delay X-ray Holography. Nature 448, 676-679 (2007).
    • (2007) Nature , vol.448 , pp. 676-679
    • Chapman, H.N.1


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