-
1
-
-
85027947787
-
Induction of colonic regulatory T cells by indigenous Clostridium species
-
K. Atarashi, T. Tanoue, T. Shima, A. Imaoka, T. Kuwahara, Y. Momose, G. Cheng, S. Yamasaki, T. Saito, and Y. Ohba Induction of colonic regulatory T cells by indigenous Clostridium species Science 331 2011 337 341
-
(2011)
Science
, vol.331
, pp. 337-341
-
-
Atarashi, K.1
Tanoue, T.2
Shima, T.3
Imaoka, A.4
Kuwahara, T.5
Momose, Y.6
Cheng, G.7
Yamasaki, S.8
Saito, T.9
Ohba, Y.10
-
2
-
-
84897138296
-
Role of the microbiota in immunity and inflammation
-
Y. Belkaid, and T.W. Hand Role of the microbiota in immunity and inflammation Cell 157 2014 121 141
-
(2014)
Cell
, vol.157
, pp. 121-141
-
-
Belkaid, Y.1
Hand, T.W.2
-
3
-
-
84856477029
-
Induction of gut IgA production through T cell-dependent and T cell-independent pathways
-
M. Bemark, P. Boysen, and N.Y. Lycke Induction of gut IgA production through T cell-dependent and T cell-independent pathways Ann. N Y Acad. Sci. 1247 2012 97 116
-
(2012)
Ann. N y Acad. Sci.
, vol.1247
, pp. 97-116
-
-
Bemark, M.1
Boysen, P.2
Lycke, N.Y.3
-
4
-
-
84867744191
-
Phylotype-level 16S rRNA analysis reveals new bacterial indicators of health state in acute murine colitis
-
D. Berry, C. Schwab, G. Milinovich, J. Reichert, K. Ben Mahfoudh, T. Decker, M. Engel, B. Hai, E. Hainzl, and S. Heider Phylotype-level 16S rRNA analysis reveals new bacterial indicators of health state in acute murine colitis ISME J. 6 2012 2091 2106
-
(2012)
ISME J.
, vol.6
, pp. 2091-2106
-
-
Berry, D.1
Schwab, C.2
Milinovich, G.3
Reichert, J.4
Ben Mahfoudh, K.5
Decker, T.6
Engel, M.7
Hai, B.8
Hainzl, E.9
Heider, S.10
-
5
-
-
84883713293
-
Secretory IgA: Designed for Anti-Microbial Defense
-
P. Brandtzaeg Secretory IgA: Designed for Anti-Microbial Defense Front Immunol 4 2013 222
-
(2013)
Front Immunol
, vol.4
, pp. 222
-
-
Brandtzaeg, P.1
-
6
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
J.G. Caporaso, J. Kuczynski, J. Stombaugh, K. Bittinger, F.D. Bushman, E.K. Costello, N. Fierer, A.G. Peña, J.K. Goodrich, and J.I. Gordon QIIME allows analysis of high-throughput community sequencing data Nat. Methods 7 2010 335 336
-
(2010)
Nat. Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Peña, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
-
7
-
-
0037450804
-
Regulatory T cells selectively express toll-like receptors and are activated by lipopolysaccharide
-
I. Caramalho, T. Lopes-Carvalho, D. Ostler, S. Zelenay, M. Haury, and J. Demengeot Regulatory T cells selectively express toll-like receptors and are activated by lipopolysaccharide J. Exp. Med. 197 2003 403 411
-
(2003)
J. Exp. Med.
, vol.197
, pp. 403-411
-
-
Caramalho, I.1
Lopes-Carvalho, T.2
Ostler, D.3
Zelenay, S.4
Haury, M.5
Demengeot, J.6
-
8
-
-
82555186583
-
Regulation of mucosal IgA responses: Lessons from primary immunodeficiencies
-
A. Cerutti, M. Cols, M. Gentile, L. Cassis, C.M. Barra, B. He, I. Puga, and K. Chen Regulation of mucosal IgA responses: lessons from primary immunodeficiencies Ann. N Y Acad. Sci. 1238 2011 132 144
-
(2011)
Ann. N y Acad. Sci.
, vol.1238
, pp. 132-144
-
-
Cerutti, A.1
Cols, M.2
Gentile, M.3
Cassis, L.4
Barra, C.M.5
He, B.6
Puga, I.7
Chen, K.8
-
9
-
-
84873454843
-
MyD88 is essential to sustain mTOR activation necessary to promote T helper 17 cell proliferation by linking IL-1 and IL-23 signaling
-
J. Chang, P.R. Burkett, C.M. Borges, V.K. Kuchroo, L.A. Turka, and C.H. Chang MyD88 is essential to sustain mTOR activation necessary to promote T helper 17 cell proliferation by linking IL-1 and IL-23 signaling Proc. Natl. Acad. Sci. USA 110 2013 2270 2275
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 2270-2275
-
-
Chang, J.1
Burkett, P.R.2
Borges, C.M.3
Kuchroo, V.K.4
Turka, L.A.5
Chang, C.H.6
-
10
-
-
79952675131
-
Follicular helper CD4 T cells (TFH)
-
S. Crotty Follicular helper CD4 T cells (TFH) Annu. Rev. Immunol. 29 2011 621 663
-
(2011)
Annu. Rev. Immunol.
, vol.29
, pp. 621-663
-
-
Crotty, S.1
-
11
-
-
84887886701
-
Innate and adaptive immunity interact to quench microbiome flagellar motility in the gut
-
T.C. Cullender, B. Chassaing, A. Janzon, K. Kumar, C.E. Muller, J.J. Werner, L.T. Angenent, M.E. Bell, A.G. Hay, and D.A. Peterson Innate and adaptive immunity interact to quench microbiome flagellar motility in the gut Cell Host Microbe 14 2013 571 581
-
(2013)
Cell Host Microbe
, vol.14
, pp. 571-581
-
-
Cullender, T.C.1
Chassaing, B.2
Janzon, A.3
Kumar, K.4
Muller, C.E.5
Werner, J.J.6
Angenent, L.T.7
Bell, M.E.8
Hay, A.G.9
Peterson, D.A.10
-
12
-
-
0037112050
-
Critical roles of activation-induced cytidine deaminase in the homeostasis of gut flora
-
S. Fagarasan, M. Muramatsu, K. Suzuki, H. Nagaoka, H. Hiai, and T. Honjo Critical roles of activation-induced cytidine deaminase in the homeostasis of gut flora Science 298 2002 1424 1427
-
(2002)
Science
, vol.298
, pp. 1424-1427
-
-
Fagarasan, S.1
Muramatsu, M.2
Suzuki, K.3
Nagaoka, H.4
Hiai, H.5
Honjo, T.6
-
13
-
-
84875862871
-
Two cases of Ruminococcus gnavus bacteremia associated with diverticulitis
-
S.G. Hansen, M.N. Skov, and U.S. Justesen Two cases of Ruminococcus gnavus bacteremia associated with diverticulitis J. Clin. Microbiol. 51 2013 1334 1336
-
(2013)
J. Clin. Microbiol.
, vol.51
, pp. 1334-1336
-
-
Hansen, S.G.1
Skov, M.N.2
Justesen, U.S.3
-
14
-
-
84859340946
-
Crohn's disease patients have more IgG-binding fecal bacteria than controls
-
H.J. Harmsen, S.D. Pouwels, A. Funke, N.A. Bos, and G. Dijkstra Crohn's disease patients have more IgG-binding fecal bacteria than controls Clin. Vaccine Immunol. 19 2012 515 521
-
(2012)
Clin. Vaccine Immunol.
, vol.19
, pp. 515-521
-
-
Harmsen, H.J.1
Pouwels, S.D.2
Funke, A.3
Bos, N.A.4
Dijkstra, G.5
-
15
-
-
84861980130
-
Interactions between the microbiota and the immune system
-
L.V. Hooper, D.R. Littman, and A.J. Macpherson Interactions between the microbiota and the immune system Science 336 2012 1268 1273
-
(2012)
Science
, vol.336
, pp. 1268-1273
-
-
Hooper, L.V.1
Littman, D.R.2
Macpherson, A.J.3
-
16
-
-
53349173070
-
Specific microbiota direct the differentiation of IL-17-producing T-helper cells in the mucosa of the small intestine
-
I.I. Ivanov, Rde.L. Frutos, N. Manel, K. Yoshinaga, D.B. Rifkin, R.B. Sartor, B.B. Finlay, and D.R. Littman Specific microbiota direct the differentiation of IL-17-producing T-helper cells in the mucosa of the small intestine Cell Host Microbe 4 2008 337 349
-
(2008)
Cell Host Microbe
, vol.4
, pp. 337-349
-
-
Ivanov, I.I.1
Frutos Rde., L.2
Manel, N.3
Yoshinaga, K.4
Rifkin, D.B.5
Sartor, R.B.6
Finlay, B.B.7
Littman, D.R.8
-
17
-
-
84876913132
-
Role of the gut microbiota in immunity and inflammatory disease
-
N. Kamada, S.U. Seo, G.Y. Chen, and G. Núñez Role of the gut microbiota in immunity and inflammatory disease Nat. Rev. Immunol. 13 2013 321 335
-
(2013)
Nat. Rev. Immunol.
, vol.13
, pp. 321-335
-
-
Kamada, N.1
Seo, S.U.2
Chen, G.Y.3
Núñez, G.4
-
18
-
-
84860123211
-
The inhibitory receptor PD-1 regulates IgA selection and bacterial composition in the gut
-
S. Kawamoto, T.H. Tran, M. Maruya, K. Suzuki, Y. Doi, Y. Tsutsui, L.M. Kato, and S. Fagarasan The inhibitory receptor PD-1 regulates IgA selection and bacterial composition in the gut Science 336 2012 485 489
-
(2012)
Science
, vol.336
, pp. 485-489
-
-
Kawamoto, S.1
Tran, T.H.2
Maruya, M.3
Suzuki, K.4
Doi, Y.5
Tsutsui, Y.6
Kato, L.M.7
Fagarasan, S.8
-
19
-
-
84864598303
-
Toll-like receptors promote mutually beneficial commensal-host interactions
-
J.L. Kubinak, and J.L. Round Toll-like receptors promote mutually beneficial commensal-host interactions PLoS Pathog. 8 2012 e1002785
-
(2012)
PLoS Pathog.
, vol.8
, pp. e1002785
-
-
Kubinak, J.L.1
Round, J.L.2
-
20
-
-
84856872027
-
Age, microbiota, and T cells shape diverse individual IgA repertoires in the intestine
-
C. Lindner, B. Wahl, L. Föhse, S. Suerbaum, A.J. Macpherson, I. Prinz, and O. Pabst Age, microbiota, and T cells shape diverse individual IgA repertoires in the intestine J. Exp. Med. 209 2012 365 377
-
(2012)
J. Exp. Med.
, vol.209
, pp. 365-377
-
-
Lindner, C.1
Wahl, B.2
Föhse, L.3
Suerbaum, S.4
Macpherson, A.J.5
Prinz, I.6
Pabst, O.7
-
21
-
-
84859720726
-
T-follicular helper cell differentiation and the co-option of this pathway by non-helper cells
-
M.A. Linterman, A. Liston, and C.G. Vinuesa T-follicular helper cell differentiation and the co-option of this pathway by non-helper cells Immunol. Rev. 247 2012 143 159
-
(2012)
Immunol. Rev.
, vol.247
, pp. 143-159
-
-
Linterman, M.A.1
Liston, A.2
Vinuesa, C.G.3
-
22
-
-
84874218199
-
The role of Peyer's patches in synchronizing gut IgA responses
-
N.Y. Lycke, and M. Bemark The role of Peyer's patches in synchronizing gut IgA responses Front Immunol 3 2012 329
-
(2012)
Front Immunol
, vol.3
, pp. 329
-
-
Lycke, N.Y.1
Bemark, M.2
-
23
-
-
80054919389
-
Secretory IgA's complex roles in immunity and mucosal homeostasis in the gut
-
N.J. Mantis, N. Rol, and B. Corthésy Secretory IgA's complex roles in immunity and mucosal homeostasis in the gut Mucosal Immunol. 4 2011 603 611
-
(2011)
Mucosal Immunol.
, vol.4
, pp. 603-611
-
-
Mantis, N.J.1
Rol, N.2
Corthésy, B.3
-
24
-
-
22144490199
-
An immunomodulatory molecule of symbiotic bacteria directs maturation of the host immune system
-
S.K. Mazmanian, C.H. Liu, A.O. Tzianabos, and D.L. Kasper An immunomodulatory molecule of symbiotic bacteria directs maturation of the host immune system Cell 122 2005 107 118
-
(2005)
Cell
, vol.122
, pp. 107-118
-
-
Mazmanian, S.K.1
Liu, C.H.2
Tzianabos, A.O.3
Kasper, D.L.4
-
25
-
-
84874479799
-
Animals in a bacterial world, a new imperative for the life sciences
-
M. McFall-Ngai, M.G. Hadfield, T.C. Bosch, H.V. Carey, T. Domazet-Lošo, A.E. Douglas, N. Dubilier, G. Eberl, T. Fukami, and S.F. Gilbert Animals in a bacterial world, a new imperative for the life sciences Proc. Natl. Acad. Sci. USA 110 2013 3229 3236
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 3229-3236
-
-
McFall-Ngai, M.1
Hadfield, M.G.2
Bosch, T.C.3
Carey, H.V.4
Domazet-Lošo, T.5
Douglas, A.E.6
Dubilier, N.7
Eberl, G.8
Fukami, T.9
Gilbert, S.F.10
-
26
-
-
84907300008
-
Immunoglobulin A coating identifies colitogenic bacteria in inflammatory bowel disease
-
N.W. Palm, M.R. de Zoete, T.W. Cullen, N.A. Barry, J. Stefanowski, L. Hao, P.H. Degnan, J. Hu, I. Peter, and W. Zhang Immunoglobulin A coating identifies colitogenic bacteria in inflammatory bowel disease Cell 158 2014 1000 1010
-
(2014)
Cell
, vol.158
, pp. 1000-1010
-
-
Palm, N.W.1
De Zoete, M.R.2
Cullen, T.W.3
Barry, N.A.4
Stefanowski, J.5
Hao, L.6
Degnan, P.H.7
Hu, J.8
Peter, I.9
Zhang, W.10
-
27
-
-
77951945504
-
Identifying biologically relevant differences between metagenomic communities
-
D.H. Parks, and R.G. Beiko Identifying biologically relevant differences between metagenomic communities Bioinformatics 26 2010 715 721
-
(2010)
Bioinformatics
, vol.26
, pp. 715-721
-
-
Parks, D.H.1
Beiko, R.G.2
-
29
-
-
78149283854
-
Mucolytic bacteria with increased prevalence in IBD mucosa augment in vitro utilization of mucin by other bacteria
-
C.W. Png, S.K. Lindén, K.S. Gilshenan, E.G. Zoetendal, C.S. McSweeney, L.I. Sly, M.A. McGuckin, and T.H. Florin Mucolytic bacteria with increased prevalence in IBD mucosa augment in vitro utilization of mucin by other bacteria Am. J. Gastroenterol. 105 2010 2420 2428
-
(2010)
Am. J. Gastroenterol.
, vol.105
, pp. 2420-2428
-
-
Png, C.W.1
Lindén, S.K.2
Gilshenan, K.S.3
Zoetendal, E.G.4
McSweeney, C.S.5
Sly, L.I.6
McGuckin, M.A.7
Florin, T.H.8
-
30
-
-
84872688583
-
Parasite-induced TH1 cells and intestinal dysbiosis cooperate in IFN-γ-dependent elimination of Paneth cells
-
M. Raetz, S.H. Hwang, C.L. Wilhelm, D. Kirkland, A. Benson, C.R. Sturge, J. Mirpuri, S. Vaishnava, B. Hou, and A.L. Defranco Parasite-induced TH1 cells and intestinal dysbiosis cooperate in IFN-γ-dependent elimination of Paneth cells Nat. Immunol. 14 2013 136 142
-
(2013)
Nat. Immunol.
, vol.14
, pp. 136-142
-
-
Raetz, M.1
Hwang, S.H.2
Wilhelm, C.L.3
Kirkland, D.4
Benson, A.5
Sturge, C.R.6
Mirpuri, J.7
Vaishnava, S.8
Hou, B.9
Defranco, A.L.10
-
31
-
-
77952866513
-
Toll-like receptor 2 signaling in CD4(+) T lymphocytes promotes T helper 17 responses and regulates the pathogenesis of autoimmune disease
-
J.M. Reynolds, B.P. Pappu, J. Peng, G.J. Martinez, Y. Zhang, Y. Chung, L. Ma, X.O. Yang, R.I. Nurieva, Q. Tian, and C. Dong Toll-like receptor 2 signaling in CD4(+) T lymphocytes promotes T helper 17 responses and regulates the pathogenesis of autoimmune disease Immunity 32 2010 692 702
-
(2010)
Immunity
, vol.32
, pp. 692-702
-
-
Reynolds, J.M.1
Pappu, B.P.2
Peng, J.3
Martinez, G.J.4
Zhang, Y.5
Chung, Y.6
Ma, L.7
Yang, X.O.8
Nurieva, R.I.9
Tian, Q.10
Dong, C.11
-
32
-
-
77954738601
-
Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota
-
J.L. Round, and S.K. Mazmanian Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota Proc. Natl. Acad. Sci. USA 107 2010 12204 12209
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 12204-12209
-
-
Round, J.L.1
Mazmanian, S.K.2
-
33
-
-
79956311926
-
The Toll-like receptor 2 pathway establishes colonization by a commensal of the human microbiota
-
J.L. Round, S.M. Lee, J. Li, G. Tran, B. Jabri, T.A. Chatila, and S.K. Mazmanian The Toll-like receptor 2 pathway establishes colonization by a commensal of the human microbiota Science 332 2011 974 977
-
(2011)
Science
, vol.332
, pp. 974-977
-
-
Round, J.L.1
Lee, S.M.2
Li, J.3
Tran, G.4
Jabri, B.5
Chatila, T.A.6
Mazmanian, S.K.7
-
34
-
-
84892474632
-
Signaling through the adaptor molecule MyD88 in CD4+ T cells is required to overcome suppression by regulatory T cells
-
D. Schenten, S.A. Nish, S. Yu, X. Yan, H.K. Lee, I. Brodsky, L. Pasman, B. Yordy, F.T. Wunderlich, and J.C. Brüning Signaling through the adaptor molecule MyD88 in CD4+ T cells is required to overcome suppression by regulatory T cells Immunity 40 2014 78 90
-
(2014)
Immunity
, vol.40
, pp. 78-90
-
-
Schenten, D.1
Nish, S.A.2
Yu, S.3
Yan, X.4
Lee, H.K.5
Brodsky, I.6
Pasman, L.7
Yordy, B.8
Wunderlich, F.T.9
Brüning, J.C.10
-
35
-
-
72949107142
-
Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities
-
P.D. Schloss, S.L. Westcott, T. Ryabin, J.R. Hall, M. Hartmann, E.B. Hollister, R.A. Lesniewski, B.B. Oakley, D.H. Parks, and C.J. Robinson Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities Appl. Environ. Microbiol. 75 2009 7537 7541
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
Lesniewski, R.A.7
Oakley, B.B.8
Parks, D.H.9
Robinson, C.J.10
-
36
-
-
84881252552
-
T follicular helper cell dynamics in germinal centers
-
Z. Shulman, A.D. Gitlin, S. Targ, M. Jankovic, G. Pasqual, M.C. Nussenzweig, and G.D. Victora T follicular helper cell dynamics in germinal centers Science 341 2013 673 677
-
(2013)
Science
, vol.341
, pp. 673-677
-
-
Shulman, Z.1
Gitlin, A.D.2
Targ, S.3
Jankovic, M.4
Pasqual, G.5
Nussenzweig, M.C.6
Victora, G.D.7
-
37
-
-
68149091349
-
Innate and adaptive immunity cooperate flexibly to maintain host-microbiota mutualism
-
E. Slack, S. Hapfelmeier, B. Stecher, Y. Velykoredko, M. Stoel, M.A. Lawson, M.B. Geuking, B. Beutler, T.F. Tedder, and W.D. Hardt Innate and adaptive immunity cooperate flexibly to maintain host-microbiota mutualism Science 325 2009 617 620
-
(2009)
Science
, vol.325
, pp. 617-620
-
-
Slack, E.1
Hapfelmeier, S.2
Stecher, B.3
Velykoredko, Y.4
Stoel, M.5
Lawson, M.A.6
Geuking, M.B.7
Beutler, B.8
Tedder, T.F.9
Hardt, W.D.10
-
38
-
-
84870243802
-
Functional flexibility of intestinal IgA - Broadening the fine line
-
E. Slack, M.L. Balmer, J.H. Fritz, and S. Hapfelmeier Functional flexibility of intestinal IgA - broadening the fine line Front Immunol 3 2012 100
-
(2012)
Front Immunol
, vol.3
, pp. 100
-
-
Slack, E.1
Balmer, M.L.2
Fritz, J.H.3
Hapfelmeier, S.4
-
40
-
-
3142621080
-
Immunoglobulin coating of faecal bacteria in inflammatory bowel disease
-
L.A. van der Waaij, F.G. Kroese, A. Visser, G.F. Nelis, B.D. Westerveld, P.L. Jansen, and J.O. Hunter Immunoglobulin coating of faecal bacteria in inflammatory bowel disease Eur. J. Gastroenterol. Hepatol. 16 2004 669 674
-
(2004)
Eur. J. Gastroenterol. Hepatol.
, vol.16
, pp. 669-674
-
-
Van Der Waaij, L.A.1
Kroese, F.G.2
Visser, A.3
Nelis, G.F.4
Westerveld, B.D.5
Jansen, P.L.6
Hunter, J.O.7
|