An improved high throughput sequencing method for studying oomycete communities

Journal of Microbiological Methods

Volumn 110, Issue , 2015, Pages 33-39

  Sapkota, Rumakanta ^a   Nicolaisen, Mogens ^a  

^a AARHUS UNIVERSITY   (Denmark)

Author keywords

Cavity spot; ITS; Next generation sequencing; Oomycete; Soil community

Indexed keywords

FUNGAL DNA; INTERNAL TRANSCRIBED SPACER 1; RIBOSOME DNA; PRIMER DNA; RIBOSOMAL SPACER DNA;

AMPLICON; APHANOMYCES; ARTICLE; CARROT; FUNGAL COMMUNITY; HIGH THROUGHPUT SEQUENCING; NONHUMAN; OOMYCETES; PERONOSPORA; PHYTOPHTHORA; PHYTOPHTHORA CACTORUM; PHYTOPHTHORA FRAGARIAE; PHYTOPHTHORA INFESTANS; PHYTOPHTHORA RUBI; POLYMERASE CHAIN REACTION; PYROSEQUENCING; PYTHIOSIS; PYTHIUM; PYTHIUM INTERMEDIUM; PYTHIUM SULCATUM; PYTHIUM SYLVATICUM; PYTHIUM VIOLAE; SAPROLEGNIA; SAPROTROPH; SOIL ANALYSIS; SPECIES DIVERSITY; TEMPERATURE SENSITIVITY; CLASSIFICATION; DENMARK; DNA BARCODING; DNA SEQUENCE; GENETIC VARIABILITY; GENETICS; MICROBIOLOGY; PROCEDURES; SPECIES DIFFERENCE;

APHANOMYCES; DAUCUS CAROTA; OOMYCETES; OTUS; PERONOSPORA; PHYTOPHTHORA; PYTHIUM; SAPROLEGNIA;

APHANOMYCES; DAUCUS CAROTA; DENMARK; DNA BARCODING, TAXONOMIC; DNA PRIMERS; DNA, RIBOSOMAL SPACER; GENETIC VARIATION; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; OOMYCETES; PERONOSPORA; PHYTOPHTHORA; POLYMERASE CHAIN REACTION; PYTHIUM; SAPROLEGNIA; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY; SPECIES SPECIFICITY;

EID: 84922655072     PISSN: 01677012     EISSN: 18728359     Source Type: Journal    
DOI: 10.1016/j.mimet.2015.01.013     Document Type: Article

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