Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data

Methods in Ecology and Evolution

Volumn 4, Issue 10, 2013, Pages 914-919

  Bengtsson Palme, Johan ^a   Ryberg, Martin ^b   Hartmann, Martin ^c,d   Branco, Sara ^e   Wang, Zheng ^f   Godhe, Anna ^g   De Wit, Pierre ^g   Sánchez García, Marisol ^h   Ebersberger, Ingo ⁱ   de Sousa, Filipe ^g   Amend, Anthony ^j   Jumpponen, Ari ^k   Unterseher, Martin ^l   Kristiansson, Erik ^m   Abarenkov, Kessy ⁿ   Bertrand, Yann J K ^g   Sanli, Kemal ^g   Eriksson, K Martin ^m   Vik, Unni ^o   Veldre, Vilmar ^p   Nilsson, R Henrik ^g   more..

^a UNIVERSITY OF GOTHENBURG   (Sweden)

^b UPPSALA UNIVERSITY   (Sweden)

^c SWISS FEDERAL RESEARCH INSTITUTE WSL   (Switzerland)

^d AGROSCOPE RECKENHOLZ TÄNIKON RESEARCH STATION ART   (Switzerland)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f YALE UNIVERSITY   (United States)

^g UNIVERSITY OF GOTHENBURG   (Sweden)

^h UNIVERSITY OF TENNESSEE   (United States)

ⁱ GOETHE UNIVERSITY   (Germany)

^j UNIVERSITY OF HAWAII   (United States)

^k KANSAS STATE UNIVERSITY   (United States)

^l UNIVERSITY OF GREIFSWALD   (Germany)

^m CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

ⁿ UNIVERSITY OF TARTU   (Estonia)

^o UNIVERSITY OF OSLO   (Norway)

^p NONE

more..

Author keywords

Fungi; Molecular ecology; Next generation sequencing; Perl; Ribosomal DNA

Indexed keywords

EID: 84885611996     PISSN: None     EISSN: 2041210X     Source Type: Journal    
DOI: 10.1111/2041-210X.12073     Document Type: Article

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