-
1
-
-
49449094873
-
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita
-
Abad, P., Gouzy, J., Aury, J. M., Castagnone-Sereno, P., Danchin, E. G., Deleury, E., Perfus-Barbeoch, L., Anthouard, V., Artiguenave, F., Blok, V. C., Caillaud, M. C., Coutinho, P. M., Dasilva, C., De Luca, F., Deau, F., Esquibet, M., Flutre, T., Goldstone, J. V., Hamamouch, N., Hewezi, T., Jaillon, O., Jubin, C., Leonetti, P., Magliano, M., Maier, T. R., Markov, G. V., McVeigh, P., Pesole, G., Poulain, J., Robinson-Rechavi, M., Sallet, E., Segurens, B., Steinbach, D., Tytgat, T., Ugarte, E., van Ghelder, C., Veronico, P., Baum, T. J., Blaxter, M., Bleve-Zacheo, T., Davis, E. L., Ewbank, J. J., Favery, B., Grenier, E., Henrissat, B., Jones, J. T., Laudet, V., Maule, A. G., Quesneville, H., Rosso, M. N., Schiex, T., Smant, G., Weissenbach, J. and Wincker, P. (2008). Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nature Biotechnology 26, 882-884.
-
(2008)
Nature Biotechnology
, vol.26
, pp. 882-884
-
-
Abad, P.1
Gouzy, J.2
Aury, J.M.3
Castagnone-Sereno, P.4
Danchin, E.G.5
Deleury, E.6
Perfus-Barbeoch, L.7
Anthouard, V.8
Artiguenave, F.9
Blok, V.C.10
Caillaud, M.C.11
Coutinho, P.M.12
Dasilva, C.13
De Luca, F.14
Deau, F.15
Esquibet, M.16
Flutre, T.17
Goldstone, J.V.18
Hamamouch, N.19
Hewezi, T.20
Jaillon, O.21
Jubin, C.22
Leonetti, P.23
Magliano, M.24
Maier, T.R.25
Markov, G.V.26
McVeigh, P.27
Pesole, G.28
Poulain, J.29
Robinson-Rechavi, M.30
Sallet, E.31
Segurens, B.32
Steinbach, D.33
Tytgat, T.34
Ugarte, E.35
Van Ghelder, C.36
Veronico, P.37
Baum, T.J.38
Blaxter, M.39
Bleve-Zacheo, T.40
Davis, E.L.41
Ewbank, J.J.42
Favery, B.43
Grenier, E.44
Henrissat, B.45
Jones, J.T.46
Laudet, V.47
Maule, A.G.48
Quesneville, H.49
Rosso, M.N.50
Schiex, T.51
Smant, G.52
Weissenbach, J.53
Wincker, P.54
more..
-
2
-
-
0031010579
-
Evidence for a clade of nematodes, arthropods and other moulting animals
-
Aguinaldo, A. M. A., Turbeville, J. M., Linford, L. S., Rivera, M. C., Garey, J. R., Raff, R. A. and Lake, J. A. (1997). Evidence for a clade of nematodes, arthropods and other moulting animals. Nature 387, 489-493.
-
(1997)
Nature
, vol.387
, pp. 489-493
-
-
Aguinaldo, A.M.A.1
Turbeville, J.M.2
Linford, L.S.3
Rivera, M.C.4
Garey, J.R.5
Raff, R.A.6
Lake, J.A.7
-
3
-
-
84880426549
-
A lover and a fighter: The genome sequence of an entomopathogenic nematode Heterorhabditis bacteriophora
-
Bai, X., Adams, B. J., Ciche, T. A., Clifton, S., Gaugler, R., Kim, K. S., Spieth, J., Sternberg, P.W., Wilson, R. K. and Grewal, P. S. (2013). A lover and a fighter: the genome sequence of an entomopathogenic nematode Heterorhabditis bacteriophora. PLOS ONE 8, e69618. doi: 10.1371/journal. pone.0069618.
-
(2013)
PLOS ONE
, vol.8
, pp. e69618
-
-
Bai, X.1
Adams, B.J.2
Ciche, T.A.3
Clifton, S.4
Gaugler, R.5
Kim, K.S.6
Spieth, J.7
Sternberg, P.W.8
Wilson, R.K.9
Grewal, P.S.10
-
4
-
-
0032559054
-
Phylogeny of Wolbachia in filarial nematodes
-
Bandi, C., Anderson, T. J., Genchi, C. and Blaxter, M. L. (1998). Phylogeny of Wolbachia in filarial nematodes. Proceedings of the Royal Society: Biological Science 265, 2407-2413.
-
(1998)
Proceedings of the Royal Society: Biological Science
, vol.265
, pp. 2407-2413
-
-
Bandi, C.1
Anderson, T.J.2
Genchi, C.3
Blaxter, M.L.4
-
5
-
-
0032992884
-
Effects of tetracycline on the filarial worms Brugia pahangi and Dirofilaria immitis and their bacterial endosymbionts Wolbachia
-
Bandi, C., McCall, J.W., Genchi, C., Corona, S., Venco, L. and Sacchi, L. (1999). Effects of tetracycline on the filarial worms Brugia pahangi and Dirofilaria immitis and their bacterial endosymbionts Wolbachia. International Journal for Parasitology 29, 357-364.
-
(1999)
International Journal for Parasitology
, vol.29
, pp. 357-364
-
-
Bandi, C.1
McCall, J.W.2
Genchi, C.3
Corona, S.4
Venco, L.5
Sacchi, L.6
-
6
-
-
78149343557
-
Moving towards a complete molecular framework of the Nematoda: A focus on the Enoplida and early-branching clades
-
Bik, H. M., Lambshead, P. J., Thomas, W. K. and Lunt, D. H. (2010). Moving towards a complete molecular framework of the Nematoda: a focus on the Enoplida and early-branching clades. BMC Evolutionary Biology 10, 353. doi: 10.1186/1471-2148-10-353.
-
(2010)
BMC Evolutionary Biology
, vol.10
, pp. 353
-
-
Bik, H.M.1
Lambshead, P.J.2
Thomas, W.K.3
Lunt, D.H.4
-
7
-
-
84894249416
-
Signatures of adaptation to plant parasitism in nematode genomes
-
Bird, D. M., Jones, J. T., Opperman, C. H., Kikuchi, T. and Danchin, E. G. J. (2014). Signatures of adaptation to plant parasitism in nematode genomes. Parasitology. doi: 10.1017/S0031182013002163.
-
(2014)
Parasitology
-
-
Bird, D.M.1
Jones, J.T.2
Opperman, C.H.3
Kikuchi, T.4
Danchin, E.G.J.5
-
8
-
-
34948840944
-
Symbiont genes in host genomes: Fragments with a future?
-
Blaxter, M. (2007). Symbiont genes in host genomes: fragments with a future? Cell Host and Microbe 2, 211-213.
-
(2007)
Cell Host and Microbe
, vol.2
, pp. 211-213
-
-
Blaxter, M.1
-
9
-
-
84862491038
-
The worm in the world and the world in the worm
-
Blaxter, M. and Denver, D. R. (2012). The worm in the world and the world in the worm. BMC Biology 10, 57. doi: 10.1186/1741-7007-10-57.
-
(2012)
BMC Biology
, vol.10
, pp. 57
-
-
Blaxter, M.1
Denver, D.R.2
-
10
-
-
84863011288
-
Genomics and transcriptomics across the diversity of the Nematoda
-
Blaxter, M., Kumar, S., Kaur, G., Koutsovoulos, G. and Elsworth, B. (2012). Genomics and transcriptomics across the diversity of the Nematoda. Parasite Immunology 34, 108-120. doi: 10.1111/j.1365-3024. 2011.01342.x.
-
(2012)
Parasite Immunology
, vol.34
, pp. 108-120
-
-
Blaxter, M.1
Kumar, S.2
Kaur, G.3
Koutsovoulos, G.4
Elsworth, B.5
-
11
-
-
84922638360
-
Phylogenomics of nematoda
-
(ed. Cotton, J., Hughes, J. and Olson, P.). Cambridge University Press, Cambridge, UK
-
Blaxter, M., Koutsovoulos, G., Jones, M., Kumar, S. and Elsworth, B. (2014). Phylogenomics of Nematoda. In Next-Generation Systematics (ed. Cotton, J., Hughes, J. and Olson, P.). Cambridge University Press, Cambridge, UK.
-
(2014)
Next-Generation Systematics
-
-
Blaxter, M.1
Koutsovoulos, G.2
Jones, M.3
Kumar, S.4
Elsworth, B.5
-
12
-
-
0029989092
-
Genes expressed in Brugia malayi infective third stage larvae
-
Blaxter, M. L., Raghavan, N., Ghosh, I., Guiliano, D., Lu, W., Williams, S. A., Slatko, B. and Scott, A. L. (1996). Genes expressed in Brugia malayi infective third stage larvae. Molecular and Biochemical Parasitology 77, 77-96.
-
(1996)
Molecular and Biochemical Parasitology
, vol.77
, pp. 77-96
-
-
Blaxter, M.L.1
Raghavan, N.2
Ghosh, I.3
Guiliano, D.4
Lu, W.5
Williams, S.A.6
Slatko, B.7
Scott, A.L.8
-
13
-
-
0003335569
-
The filarial genome project
-
(ed. Abad, P., Burnell, A., Laumond, C., Boemare, N. and Coudert, F The Commission of the European Community, Brussels, Belgium
-
Blaxter, M. L., Daub, J., Waterfall, M., Guiliano, D., Williams, S., Jayaraman, K., Ramzy, R., Slatko, B. and Scott, A. (1997). The Filarial Genome Project. In Genetic and Molecular Biology of Entomopathogenetic Nematodes (ed. Abad, P., Burnell, A., Laumond, C., Boemare, N. and Coudert, F.), pp. 47-58. The Commission of the European Community, Brussels, Belgium.
-
(1997)
Genetic and Molecular Biology of Entomopathogenetic Nematodes
, pp. 47-58
-
-
Blaxter, M.L.1
Daub, J.2
Waterfall, M.3
Guiliano, D.4
Williams, S.5
Jayaraman, K.6
Ramzy, R.7
Slatko, B.8
Scott, A.9
-
14
-
-
0032485270
-
A molecular evolutionary framework for the phylum Nematoda
-
Blaxter, M. L., De Ley, P., Garey, J. R., Liu, L. X., Scheldeman, P., Vierstraete, A., Vanfleteren, J. R., Mackey, L. Y., Dorris, M., Frisse, L. M., Vida, J. T. and Thomas, W. K. (1998). A molecular evolutionary framework for the phylum Nematoda. Nature 392, 71-75.
-
(1998)
Nature
, vol.392
, pp. 71-75
-
-
Blaxter, M.L.1
De Ley, P.2
Garey, J.R.3
Liu, L.X.4
Scheldeman, P.5
Vierstraete, A.6
Vanfleteren, J.R.7
MacKey, L.Y.8
Dorris, M.9
Frisse, L.M.10
Vida, J.T.11
Thomas, W.K.12
-
15
-
-
0347604974
-
Absence of Wolbachia in nonfilariid nematodes
-
Bordenstein, S. R., Fitch, D.H. A. and Werren, J. H. (2003). Absence of Wolbachia in nonfilariid nematodes. Journal of Nematology 35, 266-270.
-
(2003)
Journal of Nematology
, vol.35
, pp. 266-270
-
-
Bordenstein, S.R.1
Fitch, D.H.A.2
Werren, J.H.3
-
17
-
-
84866424256
-
Calling the roll on Laxus oneistus immune defense molecules
-
Bulgheresi, S. (2011). Calling the roll on Laxus oneistus immune defense molecules. Symbiosis 55, 127-135. doi: 10.1007/s13199-012-0157-3.
-
(2011)
Symbiosis
, vol.55
, pp. 127-135
-
-
Bulgheresi, S.1
-
18
-
-
1242316942
-
Mapping the presence of Wolbachia pipientis on the phylogeny of filarial nematodes: Evidence for symbiont loss during evolution
-
Casiraghi, M., Bain, O., Guerrero, R., Martin, C., Pocacqua, V., Gardner, S. L., Franceschi, A. and Bandi, C. (2004). Mapping the presence of Wolbachia pipientis on the phylogeny of filarial nematodes: evidence for symbiont loss during evolution. International Journal for Parasitology 34, 191-203. doi: 10.1016/j.ijpara.2003.10.004.
-
(2004)
International Journal for Parasitology
, vol.34
, pp. 191-203
-
-
Casiraghi, M.1
Bain, O.2
Guerrero, R.3
Martin, C.4
Pocacqua, V.5
Gardner, S.L.6
Franceschi, A.7
Bandi, C.8
-
19
-
-
84892540871
-
Phylogenomics and analysis of shared genes suggest a single transition to mutualism in Wolbachia of nematodes
-
Comandatore, F., Sassera, D., Montagna, M., Kumar, S., Koutsovoulos, G., Thomas, G., Repton, C., Babayan, S. A., Gray, N., Cordaux, R., Darby, A., Makepeace, B. and Blaxter, M. (2013). Phylogenomics and analysis of shared genes suggest a single transition to mutualism in Wolbachia of nematodes. Genome Biology and Evolution 5, 1668-1674. doi: 10.1093/gbe/evt125.
-
(2013)
Genome Biology and Evolution
, vol.5
, pp. 1668-1674
-
-
Comandatore, F.1
Sassera, D.2
Montagna, M.3
Kumar, S.4
Koutsovoulos, G.5
Thomas, G.6
Repton, C.7
Babayan, S.A.8
Gray, N.9
Cordaux, R.10
Darby, A.11
Makepeace, B.12
Blaxter, M.13
-
20
-
-
78049316906
-
Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes
-
Danchin, E. G., Rosso, M. N., Vieira, P., de Almeida-Engler, J., Coutinho, P. M., Henrissat, B. and Abad, P. (2010). Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes. Proceedings of the National Academy of Sciences USA 107, 17651-17656. doi: 10.1073/pnas.1008486107.
-
(2010)
Proceedings of the National Academy of Sciences USA
, vol.107
, pp. 17651-17656
-
-
Danchin, E.G.1
Rosso, M.N.2
Vieira, P.3
De Almeida-Engler, J.4
Coutinho, P.M.5
Henrissat, B.6
Abad, P.7
-
21
-
-
84868113800
-
Analysis of gene expression from the Wolbachia genome of a filarial nematode supports both metabolic and defensive roles within the symbiosis
-
Darby, A. C., Armstrong, S. D., Bah, G. S., Kaur, G., Hughes, M. A., Kay, S. M., Koldkjaer, P., Rainbow, L., Radford, A. D., Blaxter, M. L., Tanya, V. N., Trees, A. J., Cordaux, R., Wastling, J. M. and Makepeace, B. L. (2012). Analysis of gene expression from the Wolbachia genome of a filarial nematode supports both metabolic and defensive roles within the symbiosis. Genome Research 22, 2467-2477. doi: 10.1101/gr.138420.112.
-
(2012)
Genome Research
, vol.22
, pp. 2467-2477
-
-
Darby, A.C.1
Armstrong, S.D.2
Bah, G.S.3
Kaur, G.4
Hughes, M.A.5
Kay, S.M.6
Koldkjaer, P.7
Rainbow, L.8
Radford, A.D.9
Blaxter, M.L.10
Tanya, V.N.11
Trees, A.J.12
Cordaux, R.13
Wastling, J.M.14
Makepeace, B.L.15
-
22
-
-
33749450254
-
A new system for Nematoda: Combining morphological characters with molecular trees, and translating clades into ranks and taxa
-
ed. Cook, R. and Hunt, D. J
-
De Ley, P. and Blaxter, M. (2004). A new system for Nematoda: combining morphological characters with molecular trees, and translating clades into ranks and taxa. In Nematology Monographs and Perspectives, Vol. 2 (ed. Cook, R. and Hunt, D. J.), pp. 633-653. E.J. Brill, Leiden, the Netherlands.
-
(2004)
Nematology Monographs and Perspectives
, vol.2
, pp. 633-653
-
-
De Ley, P.1
Blaxter, M.2
-
23
-
-
0003131773
-
Systematic position and phylogeny
-
(ed. Lee, D Taylor & Francis, London, UK
-
De Ley, P. and Blaxter, M. L. (2002). Systematic position and phylogeny. In The Biology of Nematodes (ed. Lee, D.), pp. 1-30. Taylor & Francis, London, UK.
-
(2002)
The Biology of Nematodes
, pp. 1-30
-
-
De Ley, P.1
Blaxter, M.L.2
-
24
-
-
84878534378
-
Genomics of Loa loa a Wolbachia-free filarial parasite of humans
-
Desjardins, C. A., Cerqueira, G. C., Goldberg, J. M., Dunning Hotopp, J. C., Haas, B. J., Zucker, J., Ribeiro, J. M., Saif, S., Levin, J. Z., Fan, L., Zeng, Q., Russ, C., Wortman, J. R., Fink, D. L., Birren, B.W. and Nutman, T. B. (2013). Genomics of Loa loa, a Wolbachia-free filarial parasite of humans. Nature Genetics 45, 495-500. doi: 10.1038/ng.2585.
-
(2013)
Nature Genetics
, vol.45
, pp. 495-500
-
-
Desjardins, C.A.1
Cerqueira, G.C.2
Goldberg, J.M.3
Dunning Hotopp, J.C.4
Haas, B.J.5
Zucker, J.6
Ribeiro, J.M.7
Saif, S.8
Levin, J.Z.9
Fan, L.10
Zeng, Q.11
Russ, C.12
Wortman, J.R.13
Fink, D.L.14
Birren, B.W.15
Nutman, T.B.16
-
25
-
-
52949136971
-
The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism
-
Dieterich, C., Clifton, S.W., Schuster, L. N., Chinwalla, A., Delehaunty, K., Dinkelacker, I., Fulton, L., Fulton, R., Godfrey, J., Minx, P., Mitreva, M., Roeseler, W., Tian, H., Witte, H., Yang, S. P., Wilson, R. K. and Sommer, R. J. (2008). The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism. Nature Genetics 40, 1193-1198. doi: 10.1038/ng.227.
-
(2008)
Nature Genetics
, vol.40
, pp. 1193-1198
-
-
Dieterich, C.1
Clifton, S.W.2
Schuster, L.N.3
Chinwalla, A.4
Delehaunty, K.5
Dinkelacker, I.6
Fulton, L.7
Fulton, R.8
Godfrey, J.9
Minx, P.10
Mitreva, M.11
Roeseler, W.12
Tian, H.13
Witte, H.14
Yang, S.P.15
Wilson, R.K.16
Sommer, R.J.17
-
26
-
-
50049088229
-
Colloquium paper: Homage to Linnaeus: How many parasites? How many hosts?
-
Dobson, A., Lafferty, K. D., Kuris, A. M., Hechinger, R. F. and Jetz, W. (2008). Colloquium paper: homage to Linnaeus: how many parasites? How many hosts? Proceedings of the National Academy of Sciences USA 105(Suppl. 1), 11482-11489. doi: 10.1073/pnas. 0803232105.
-
(2008)
Proceedings of the National Academy of Sciences USA
, vol.105
, pp. 11482-11489
-
-
Dobson, A.1
Lafferty, K.D.2
Kuris, A.M.3
Hechinger, R.F.4
Jetz, W.5
-
27
-
-
0033135245
-
Molecular analysis of nematode diversity and the evolution of parasitism
-
Dorris, M., De Ley, P. and Blaxter, M. L. (1999). Molecular analysis of nematode diversity and the evolution of parasitism. Parasitology Today 15, 188-193.
-
(1999)
Parasitology Today
, vol.15
, pp. 188-193
-
-
Dorris, M.1
De Ley, P.2
Blaxter, M.L.3
-
28
-
-
42149157760
-
Broad phylogenomic sampling improves resolution of the animal tree of life
-
Dunn, C.W., Hejnol, A., Matus, D. Q., Pang, K., Browne, W. E., Smith, S. A., Seaver, E., Rouse, G.W., Obst, M., Edgecombe, G. D., Sorensen, M. V., Haddock, S. H., Schmidt-Rhaesa, A., Okusu, A., Kristensen, R. M., Wheeler,W. C., Martindale, M. Q. and Giribet, G. (2008). Broad phylogenomic sampling improves resolution of the animal tree of life. Nature 452, 745-749. doi: 10.1038/nature06614.
-
(2008)
Nature
, vol.452
, pp. 745-749
-
-
Dunn, C.W.1
Hejnol, A.2
Matus, D.Q.3
Pang, K.4
Browne, W.E.5
Smith, S.A.6
Seaver, E.7
Rouse, G.W.8
Obst, M.9
Edgecombe, G.D.10
Sorensen, M.V.11
Haddock, S.H.12
Schmidt-Rhaesa, A.13
Okusu, A.14
Kristensen, R.M.15
Wheeler, W.C.16
Martindale, M.Q.17
Giribet, G.18
-
29
-
-
34548768028
-
Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes
-
Dunning-Hotopp, J. C., Clark, M. E., Oliveira, D. C., Foster, J. M., Fischer, P., Munoz Torres, M. C., Giebel, J. D., Kumar, N., Ishmael, N., Wang, S., Ingram, J., Nene, R. V., Shepard, J., Tomkins, J., Richards, S., Spiro, D. J., Ghedin, E., Slatko, B. E., Tettelin, H. and Werren, J. H. (2007). Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes. Science 317, 1753-1756. doi: 10.1126/science.1142490.
-
(2007)
Science
, vol.317
, pp. 1753-1756
-
-
Dunning-Hotopp, J.C.1
Clark, M.E.2
Oliveira, D.C.3
Foster, J.M.4
Fischer, P.5
Munoz Torres, M.C.6
Giebel, J.D.7
Kumar, N.8
Ishmael, N.9
Wang, S.10
Ingram, J.11
Nene, R.V.12
Shepard, J.13
Tomkins, J.14
Richards, S.15
Spiro, D.J.16
Ghedin, E.17
Slatko, B.E.18
Tettelin, H.19
Werren, J.H.20
more..
-
30
-
-
34547823534
-
Absence of Wolbachia in nonfilariid worms parasitizing arthropods
-
Duron, O. and Gavotte, L. (2007). Absence of Wolbachia in nonfilariid worms parasitizing arthropods. Current Microbiology 55, 193-197. doi: 10.1007/s00284-006-0578-4.
-
(2007)
Current Microbiology
, vol.55
, pp. 193-197
-
-
Duron, O.1
Gavotte, L.2
-
31
-
-
79956345284
-
NEMBASE4: The nematode transcriptome resource
-
Elsworth, B., Wasmuth, J. and Blaxter, M. (2011). NEMBASE4: the nematode transcriptome resource. International Journal for Parasitology 41, 881-894. doi: 10.1016/j.ijpara.2011.03.009.
-
(2011)
International Journal for Parasitology
, vol.41
, pp. 881-894
-
-
Elsworth, B.1
Wasmuth, J.2
Blaxter, M.3
-
32
-
-
1642315541
-
Are filarial nematode Wolbachia obligate mutualist symbionts?
-
Fenn, K. and Blaxter, M. (2004). Are filarial nematode Wolbachia obligate mutualist symbionts? Trends in Ecology and Evolution 19, 163-166.
-
(2004)
Trends in Ecology and Evolution
, vol.19
, pp. 163-166
-
-
Fenn, K.1
Blaxter, M.2
-
33
-
-
84870005203
-
Coexist, cooperate and thrive: Wolbachia as long-term symbionts of filarial nematodes
-
Fenn, K. and Blaxter, M. (2007). Coexist, cooperate and thrive: Wolbachia as long-term symbionts of filarial nematodes. Issues in Infectious Disease 5, 66-76.
-
(2007)
Issues in Infectious Disease
, vol.5
, pp. 66-76
-
-
Fenn, K.1
Blaxter, M.2
-
34
-
-
64949160871
-
Absence of Wolbachia endobacteria in the non-filariid nematodes Angiostrongylus cantonensis and A costaricensis
-
Foster, J. M., Kumar, S., Ford, L., Johnston, K. L., Ben, R., Graeff-Teixeira, C. and Taylor, M. J. (2008). Absence of Wolbachia endobacteria in the non-filariid nematodes Angiostrongylus cantonensis and A. costaricensis. Parasitology Vectors 1, 31. doi: 10.1186/1756-3305-1-31.
-
(2008)
Parasitology Vectors
, vol.1
, pp. 31
-
-
Foster, J.M.1
Kumar, S.2
Ford, L.3
Johnston, K.L.4
Ben, R.5
Graeff-Teixeira, C.6
Taylor, M.J.7
-
35
-
-
34648836102
-
Draft genome of the filarial nematode parasite Brugia malayi
-
Ghedin, E., Wang, S., Spiro, D., Caler, E., Zhao, Q., Crabtree, J., Allen, J. E., Delcher, A. L., Guiliano, D. B., Miranda-Saavedra, D., Angiuoli, S. V., Creasy, T., Amedeo, P., Haas, B., El-Sayed, N. M., Wortman, J. R., Feldblyum, T., Tallon, L., Schatz, M., Shumway, M., Koo, H., Salzberg, S. L., Schobel, S., Pertea, M., Pop, M., White, O., Barton, G. J., Carlow, C. K., Crawford, M. J., Daub, J., Dimmic, M.W., Estes, C. F., Foster, J. M., Ganatra, M., Gregory,W. F., Johnson, N. M., Jin, J., Komuniecki, R., Korf, I., Kumar, S., Laney, S., Li, B.W., Li,W., Lindblom, T. H., Lustigman, S., Ma, D., Maina, C. V., Martin, D. M., McCarter, J. P., McReynolds, L., Mitreva, M., Nutman, T. B., Parkinson, J., Peregrin-Alvarez, J. M., Poole, C., Ren, Q., Saunders, L., Sluder, A. E., Smith, K., Stanke, M., Unnasch, T. R., Ware, J., Wei, A. D., Weil, G., Williams, D. J., Zhang, Y., Williams, S. A., Fraser-Liggett, C., Slatko, B., Blaxter, M. L. and Scott, A. L. (2007). Draft genome of the filarial nematode parasite Brugia malayi. Science 317, 1756-1760. doi: 10.1126/science.1145406.
-
(2007)
Science
, vol.317
, pp. 1756-1760
-
-
Ghedin, E.1
Wang, S.2
Spiro, D.3
Caler, E.4
Zhao, Q.5
Crabtree, J.6
Allen, J.E.7
Delcher, A.L.8
Guiliano, D.B.9
Miranda-Saavedra, D.10
Angiuoli, S.V.11
Creasy, T.12
Amedeo, P.13
Haas, B.14
El-Sayed, N.M.15
Wortman, J.R.16
Feldblyum, T.17
Tallon, L.18
Schatz, M.19
Shumway, M.20
Koo, H.21
Salzberg, S.L.22
Schobel, S.23
Pertea, M.24
Pop, M.25
White, O.26
Barton, G.J.27
Carlow, C.K.28
Crawford, M.J.29
Daub, J.30
Dimmic, M.W.31
Estes, C.F.32
Foster, J.M.33
Ganatra, M.34
Gregory, W.F.35
Johnson, N.M.36
Jin, J.37
Komuniecki, R.38
Korf, I.39
Kumar, S.40
Laney, S.41
Li, B.W.42
Li, W.43
Lindblom, T.H.44
Lustigman, S.45
Ma, D.46
Maina, C.V.47
Martin, D.M.48
McCarter, J.P.49
McReynolds, L.50
Mitreva, M.51
Nutman, T.B.52
Parkinson, J.53
Peregrin-Alvarez, J.M.54
Poole, C.55
Ren, Q.56
Saunders, L.57
Sluder, A.E.58
Smith, K.59
Stanke, M.60
Unnasch, T.R.61
Ware, J.62
Wei, A.D.63
Weil, G.64
Williams, D.J.65
Zhang, Y.66
Williams, S.A.67
Fraser-Liggett, C.68
Slatko, B.69
Blaxter, M.L.70
Scott, A.L.71
more..
-
36
-
-
84868274725
-
The genome of the heartworm, Dirofilaria immitis, reveals drug and vaccine targets
-
Godel, C., Kumar, S., Koutsovoulos, G., Ludin, P., Nilsson, D., Comandatore, F.,Wrobel, N., Thompson, M., Schmid, C. D., Goto, S., Bringaud, F., Wolstenholme, A., Bandi, C., Epe, C., Kaminsky, R., Blaxter, M. and Maser, P. (2012). The genome of the heartworm, Dirofilaria immitis, reveals drug and vaccine targets. Faseb Journal 26, 4650-4661. doi: 10.1096/fj.12-205096.
-
(2012)
Faseb Journal
, vol.26
, pp. 4650-4661
-
-
Godel, C.1
Kumar, S.2
Koutsovoulos, G.3
Ludin, P.4
Nilsson, D.5
Comandatore, F.6
Wrobel, N.7
Thompson, M.8
Schmid, C.D.9
Goto, S.10
Bringaud, F.11
Wolstenholme, A.12
Bandi, C.13
Epe, C.14
Kaminsky, R.15
Blaxter, M.16
Maser, P.17
-
37
-
-
34250748585
-
They've got a ticket to ride: Xenorhabdus nematophila-Steinernema carpocapsae symbiosis
-
Goodrich-Blair, H. (2007). They've got a ticket to ride: Xenorhabdus nematophila-Steinernema carpocapsae symbiosis. Current Opinion in Microbiology 10, 225-230. doi: 10.1016/j.mib.2007.05.006.
-
(2007)
Current Opinion in Microbiology
, vol.10
, pp. 225-230
-
-
Goodrich-Blair, H.1
-
38
-
-
67349249852
-
An endosymbiotic bacterium in a plant-parasitic nematode: Member of a new Wolbachia supergroup
-
Haegeman, A., Vanholme, B., Jacob, J., Vandekerckhove, T. T., Claeys, M., Borgonie, G. and Gheysen, G. (2009). An endosymbiotic bacterium in a plant-parasitic nematode: member of a new Wolbachia supergroup. International Journal for Parasitology 39, 1045-1054. doi: 10.1016/j.ijpara.2009.01.006.
-
(2009)
International Journal for Parasitology
, vol.39
, pp. 1045-1054
-
-
Haegeman, A.1
Vanholme, B.2
Jacob, J.3
Vandekerckhove, T.T.4
Claeys, M.5
Borgonie, G.6
Gheysen, G.7
-
40
-
-
0033045674
-
The life cycle of a horsehair worm, Gordius robustus (Nematomorpha: Gordioidea)
-
Hanelt, B. and Janovy, J., Jr. (1999). The life cycle of a horsehair worm, Gordius robustus (Nematomorpha: Gordioidea). Journal of Parasitology 85, 139-141.
-
(1999)
Journal of Parasitology
, vol.85
, pp. 139-141
-
-
Hanelt, B.1
Janovy, J.2
-
41
-
-
0345490803
-
Tetracycline therapy targets intracellular bacteria in the filarial nematode Litomosoides sigmodontis and results in filarial infertility
-
Hoerauf, A., Nissen-Pahle, K., Schmetz, C., Henkle-Duhrsen, K., Blaxter, M. L., Buttner, D.W., Gallin, M. Y., Al-Qaoud, K. M., Lucius, R. and Fleischer, B. (1999). Tetracycline therapy targets intracellular bacteria in the filarial nematode Litomosoides sigmodontis and results in filarial infertility. Journal of Clinical Investigation 103, 11-18.
-
(1999)
Journal of Clinical Investigation
, vol.103
, pp. 11-18
-
-
Hoerauf, A.1
Nissen-Pahle, K.2
Schmetz, C.3
Henkle-Duhrsen, K.4
Blaxter, M.L.5
Buttner, D.W.6
Gallin, M.Y.7
Al-Qaoud, K.M.8
Lucius, R.9
Fleischer, B.10
-
42
-
-
33748158280
-
Phylumwide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown Clades
-
Holterman, M., van der Wurff, A., van den Elsen, S., van Megen, H., Bongers, T., Holovachov, O., Bakker, J. and Helder, J. (2006). Phylumwide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown Clades. Molecular Biology and Evolution 23, 1792-1800.
-
(2006)
Molecular Biology and Evolution
, vol.23
, pp. 1792-1800
-
-
Holterman, M.1
Van Der Wurff, A.2
Van Den Elsen, S.3
Van Megen, H.4
Bongers, T.5
Holovachov, O.6
Bakker, J.7
Helder, J.8
-
43
-
-
62249185296
-
Small subunit rDNA-based phylogeny of the Tylenchida sheds light on relationships among some high-impact plant-parasitic nematodes and the evolution of plant feeding
-
Holterman, M., Karssen, G., van den Elsen, S., van Megen, H., Bakker, J. and Helder, J. (2009). Small subunit rDNA-based phylogeny of the Tylenchida sheds light on relationships among some high-impact plant-parasitic nematodes and the evolution of plant feeding. Phytopathology 99, 227-235. doi: 10.1094/PHYTO-99-3-0227.
-
(2009)
Phytopathology
, vol.99
, pp. 227-235
-
-
Holterman, M.1
Karssen, G.2
Van Den Elsen, S.3
Van Megen, H.4
Bakker, J.5
Helder, J.6
-
44
-
-
0000749071
-
A synopsis of the Rhigonematidae (Nematoda), with an outline classification of the Rhigonematida
-
Hunt, D. J. (1996). A synopsis of the Rhigonematidae (Nematoda), with an outline classification of the Rhigonematida. Afro-Asian Journal of Nematology 6, 137-150.
-
(1996)
Afro-Asian Journal of Nematology
, vol.6
, pp. 137-150
-
-
Hunt, D.J.1
-
45
-
-
84882791773
-
The i5K Initiative: Advancing arthropod genomics for knowledge, human health, agriculture, and the environment
-
I5K Consortium
-
I5K Consortium (2013). The i5K Initiative: advancing arthropod genomics for knowledge, human health, agriculture, and the environment. Journal of Heredity 104, 595-600. doi: 10.1093/jhered/est050.
-
(2013)
Journal of Heredity
, vol.104
, pp. 595-600
-
-
-
46
-
-
84884308327
-
Extensively duplicated and transcriptionally active recent lateral gene transfer from a bacterial Wolbachia endosymbiont to its host filarial nematode Brugia malayi
-
Ioannidis, P., Johnston, K. L., Riley, D. R., Kumar, N., White, J. R., Olarte, K. T., Ott, S., Tallon, L. J., Foster, J. M., Taylor, M. J. and Dunning Hotopp, J. C. (2013). Extensively duplicated and transcriptionally active recent lateral gene transfer from a bacterial Wolbachia endosymbiont to its host filarial nematode Brugia malayi. BMC Genomics 14, 639. doi: 10.1186/1471-2164-14-639.
-
(2013)
BMC Genomics
, vol.14
, pp. 639
-
-
Ioannidis, P.1
Johnston, K.L.2
Riley, D.R.3
Kumar, N.4
White, J.R.5
Olarte, K.T.6
Ott, S.7
Tallon, L.J.8
Foster, J.M.9
Taylor, M.J.10
Dunning Hotopp, J.C.11
-
47
-
-
41449095270
-
Exploring the transcriptome of the burrowing nematode Radopholus similis
-
Jacob, J., Mitreva, M., Vanholme, B. and Gheysen, G. (2008). Exploring the transcriptome of the burrowing nematode Radopholus similis. Molecular Genetics and Genomics 280, 1-17. doi: 10.1007/s00438-008-0340-7.
-
(2008)
Molecular Genetics and Genomics
, vol.280
, pp. 1-17
-
-
Jacob, J.1
Mitreva, M.2
Vanholme, B.3
Gheysen, G.4
-
48
-
-
78751646888
-
IPhy: An integrated phylogenetic workbench for supermatrix analyses
-
Jones, M. O., Koutsovoulos, G. D. and Blaxter, M. L. (2011). iPhy: an integrated phylogenetic workbench for supermatrix analyses. BMC Bioinformatics 12, 30. doi: 10.1186/1471-2105-12-30.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 30
-
-
Jones, M.O.1
Koutsovoulos, G.D.2
Blaxter, M.L.3
-
49
-
-
0032221643
-
Phylogenetic analysis of rDNA sequences from adenophorean nematodes and implications for the Adenophorea-Secernetea controversy
-
Kampfer, S., Sturmbauer, C. and Ott, C. J. (1998). Phylogenetic analysis of rDNA sequences from adenophorean nematodes and implications for the Adenophorea-Secernetea controversy. Invertebrate Biology 117, 29-36.
-
(1998)
Invertebrate Biology
, vol.117
, pp. 29-36
-
-
Kampfer, S.1
Sturmbauer, C.2
Ott, C.J.3
-
50
-
-
80053454201
-
Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus
-
Kikuchi, T., Cotton, J. A., Dalzell, J. J., Hasegawa, K., Kanzaki, N., McVeigh, P., Takanashi, T., Tsai, I. J., Assefa, S. A., Cock, P. J., Otto, T. D., Hunt, M., Reid, A. J., Sanchez-Flores, A., Tsuchihara, K., Yokoi, T., Larsson, M. C., Miwa, J., Maule, A. G., Sahashi, N., Jones, J. T. and Berriman, M. (2011). Genomic insights into the origin of parasitism in the emerging plant pathogen Bursaphelenchus xylophilus. PLOS Pathogenesis 7, e1002219. doi: 10.1371/journal.ppat. 1002219.
-
(2011)
PLOS Pathogenesis
, vol.7
, pp. e1002219
-
-
Kikuchi, T.1
Cotton, J.A.2
Dalzell, J.J.3
Hasegawa, K.4
Kanzaki, N.5
McVeigh, P.6
Takanashi, T.7
Tsai, I.J.8
Assefa, S.A.9
Cock, P.J.10
Otto, T.D.11
Hunt, M.12
Reid, A.J.13
Sanchez-Flores, A.14
Tsuchihara, K.15
Yokoi, T.16
Larsson, M.C.17
Miwa, J.18
Maule, A.G.19
Sahashi, N.20
Jones, J.T.21
Berriman, M.22
more..
-
51
-
-
84903470156
-
Palaeosymbiosis revealed by genomic fossils of Wolbachia in a strongyloidean nematode
-
Koutsovoulos, G., Makepeace, B., Tanya, V. and Blaxter, M. (2014). Palaeosymbiosis revealed by genomic fossils of Wolbachia in a strongyloidean nematode. PLOS Genetics 10, e1004397. doi: 10.1371/journal. pgen.1004397.
-
(2014)
PLOS Genetics
, vol.10
, pp. e1004397
-
-
Koutsovoulos, G.1
Makepeace, B.2
Tanya, V.3
Blaxter, M.4
-
52
-
-
84905404681
-
Toward 959 nematode genomes
-
Kumar, S., Koutsovoulos, G., Kaur, G. and Blaxter, M. (2012a). Toward 959 nematode genomes. Worm 1, 1-9.
-
(2012)
Worm
, vol.1
, pp. 1-9
-
-
Kumar, S.1
Koutsovoulos, G.2
Kaur, G.3
Blaxter, M.4
-
53
-
-
84856998493
-
959 Nematode genomes: A semantic wiki for coordinating sequencing projects
-
Kumar, S., Schiffer, P. H. and Blaxter, M. (2012b). 959 Nematode genomes: a semantic wiki for coordinating sequencing projects. Nucleic Acids Research 40, D1295-1300. doi: 10.1093/nar/gkr826.
-
(2012)
Nucleic Acids Research
, vol.40
, pp. D1295-1300
-
-
Kumar, S.1
Schiffer, P.H.2
Blaxter, M.3
-
54
-
-
84860516611
-
The phylogenetics of Anguillicolidae (Nematoda: Anguillicolidea), swimbladder parasites of eels
-
Laetsch, D. R., Heitlinger, E. G., Taraschewski, H., Nadler, S. A. and Blaxter, M. L. (2012). The phylogenetics of Anguillicolidae (Nematoda: Anguillicolidea), swimbladder parasites of eels. BMC Evolutionary Biology 12, 60. doi: 10.1186/1471-2148-12-60.
-
(2012)
BMC Evolutionary Biology
, vol.12
, pp. 60
-
-
Laetsch, D.R.1
Heitlinger, E.G.2
Taraschewski, H.3
Nadler, S.A.4
Blaxter, M.L.5
-
55
-
-
84883086002
-
The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery
-
Laing, R., Kikuchi, T., Martinelli, A., Tsai, I. J., Beech, R. N., Redman, E., Holroyd, N., Bartley, D. J., Beasley, H., Britton, C., Curran, D., Devaney, E., Gilabert, A., Hunt, M., Jackson, F., Johnston, S. L., Kryukov, I., Li, K., Morrison, A. A., Reid, A. J., Sargison, N., Saunders, G. I., Wasmuth, J. D., Wolstenholme, A., Berriman, M., Gilleard, J. S. and Cotton, J. A. (2013). The genome and transcriptome of Haemonchus contortus, a key model parasite for drug and vaccine discovery. Genome Biology 14, R88. doi: 10.1186/gb-2013-14-8-r88.
-
(2013)
Genome Biology
, vol.14
, pp. R88
-
-
Laing, R.1
Kikuchi, T.2
Martinelli, A.3
Tsai, I.J.4
Beech, R.N.5
Redman, E.6
Holroyd, N.7
Bartley, D.J.8
Beasley, H.9
Britton, C.10
Curran, D.11
Devaney, E.12
Gilabert, A.13
Hunt, M.14
Jackson, F.15
Johnston, S.L.16
Kryukov, I.17
Li, K.18
Morrison, A.A.19
Reid, A.J.20
Sargison, N.21
Saunders, G.I.22
Wasmuth, J.D.23
Wolstenholme, A.24
Berriman, M.25
Gilleard, J.S.26
Cotton, J.A.27
more..
-
56
-
-
0027708635
-
Recent developments in marine benthic biodiversity research
-
Lambshead, P. J. D. (1993). Recent developments in marine benthic biodiversity research. Oceanis 19, 5-24.
-
(1993)
Oceanis
, vol.19
, pp. 5-24
-
-
Lambshead, P.J.D.1
-
57
-
-
81755187248
-
Anti-filarial activity of antibiotic therapy is due to extensive apoptosis after Wolbachia depletion from filarial nematodes
-
Landmann, F., Voronin, D., Sullivan, W. and Taylor, M. J. (2011). Anti-filarial activity of antibiotic therapy is due to extensive apoptosis after Wolbachia depletion from filarial nematodes. PLOS Pathogenesis 7, e1002351. doi: 10.1371/journal.ppat.1002351.
-
(2011)
PLOS Pathogenesis
, vol.7
, pp. e1002351
-
-
Landmann, F.1
Voronin, D.2
Sullivan, W.3
Taylor, M.J.4
-
58
-
-
84964902779
-
Both asymmetric mitotic segregation and cell-to-cell invasion are required for stable germline transmission of Wolbachia in filarial nematodes
-
Landmann, F., Bain, O., Martin, C., Uni, S., Taylor, M. J. and Sullivan, W. (2012). Both asymmetric mitotic segregation and cell-to-cell invasion are required for stable germline transmission of Wolbachia in filarial nematodes. Biology Open 1, 536-547. doi: 10.1242/bio.2012737.
-
(2012)
Biology Open
, vol.1
, pp. 536-547
-
-
Landmann, F.1
Bain, O.2
Martin, C.3
Uni, S.4
Taylor, M.J.5
Sullivan, W.6
-
59
-
-
69949126557
-
PhyloBayes 3: A Bayesian software package for phylogenetic reconstruction and molecular dating
-
Lartillot, N., Lepage, T. and Blanquart, S. (2009). PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating. Bioinformatics 25, 2286-2288. doi: 10.1093/bioinformatics/btp368.
-
(2009)
Bioinformatics
, vol.25
, pp. 2286-2288
-
-
Lartillot, N.1
Lepage, T.2
Blanquart, S.3
-
60
-
-
0141519279
-
OrthoMCL: Identification of ortholog groups for eukaryotic genomes
-
Li, L., Stoeckert, C. J., Jr. and Roos, D. S. (2003). OrthoMCL: identification of ortholog groups for eukaryotic genomes. Genome Research 13, 2178-2189.
-
(2003)
Genome Research
, vol.13
, pp. 2178-2189
-
-
Li, L.1
Stoeckert, C.J.2
Roos, D.S.3
-
61
-
-
0036184350
-
How many Wolbachia supergroups exist?
-
Lo, N., Casiraghi, M., Salati, E., Bazzocchi, C. and Bandi, C. (2002). How many Wolbachia supergroups exist? Molecular Biology and Evolution 19, 341-346.
-
(2002)
Molecular Biology and Evolution
, vol.19
, pp. 341-346
-
-
Lo, N.1
Casiraghi, M.2
Salati, E.3
Bazzocchi, C.4
Bandi, C.5
-
62
-
-
84903828669
-
The complex hybrid origins of the root knot nematodes revealed through comparative genomics
-
Lunt, D. H., Kumar, S., Koutsovoulos, G. and Blaxter, M. L. (2014). The complex hybrid origins of the root knot nematodes revealed through comparative genomics. peerJ 6, e356 doi: 10.7717/peerj.356.
-
(2014)
Peer J
, vol.6
, pp. e356
-
-
Lunt, D.H.1
Kumar, S.2
Koutsovoulos, G.3
Blaxter, M.L.4
-
63
-
-
78651268231
-
Horizontal gene transfer of microbial cellulases into nematode genomes is associated with functional assimilation and gene turnover
-
Mayer, W. E., Schuster, L. N., Bartelmes, G., Dieterich, C. and Sommer, R. J. (2011). Horizontal gene transfer of microbial cellulases into nematode genomes is associated with functional assimilation and gene turnover. BMC Evolutionary Biology 11, 13. doi: 10.1186/1471-2148-11-13.
-
(2011)
BMC Evolutionary Biology
, vol.11
, pp. 13
-
-
Mayer, W.E.1
Schuster, L.N.2
Bartelmes, G.3
Dieterich, C.4
Sommer, R.J.5
-
64
-
-
84871675154
-
Localization of Wolbachia-like gene transcripts and peptides in adult Onchocerca flexuosa worms indicates tissue specific expression
-
McNulty, S. N., Fischer, K., Curtis, K. C., Weil, G. J., Brattig, N.W. and Fischer, P. U. (2013). Localization of Wolbachia-like gene transcripts and peptides in adult Onchocerca flexuosa worms indicates tissue specific expression. Parasitology Vectors 6, 2. doi: 10.1186/1756-3305-6-2.
-
(2013)
Parasitology Vectors
, vol.6
, pp. 2
-
-
McNulty, S.N.1
Fischer, K.2
Curtis, K.C.3
Weil, G.J.4
Brattig, N.W.5
Fischer, P.U.6
-
65
-
-
33847315528
-
An improved molecular phylogeny of the Nematoda with special emphasis on marine taxa
-
Meldal, B. H., Debenham, N. J., De Ley, P., De Ley, I. T., Vanfleteren, J. R., Vierstraete, A. R., Bert, W., Borgonie, G., Moens, T., Tyler, P. A., Austen, M. C., Blaxter, M. L., Rogers, A. D. and Lambshead, P. J. (2007). An improved molecular phylogeny of the Nematoda with special emphasis on marine taxa. Molecular Phylogenetics and Evolution 42, 622-636.
-
(2007)
Molecular Phylogenetics and Evolution
, vol.42
, pp. 622-636
-
-
Meldal, B.H.1
Debenham, N.J.2
De Ley, P.3
De Ley, I.T.4
Vanfleteren, J.R.5
Vierstraete, A.R.6
Bert, W.7
Borgonie, G.8
Moens, T.9
Tyler, P.A.10
Austen, M.C.11
Blaxter, M.L.12
Rogers, A.D.13
Lambshead, P.J.14
-
66
-
-
65549151729
-
Role of horizontal gene transfer in the evolution of plant parasitism among nematodes
-
Mitreva, M., Smant, G. and Helder, J. (2009). Role of horizontal gene transfer in the evolution of plant parasitism among nematodes. Methods in Molecular Biology 532, 517-535. doi: 10.1007/978-1-60327-853-9-30.
-
(2009)
Methods in Molecular Biology
, vol.532
, pp. 517-535
-
-
Mitreva, M.1
Smant, G.2
Helder, J.3
-
67
-
-
79952195648
-
The draft genome of the parasitic nematode Trichinella spiralis
-
Mitreva, M., Jasmer, D. P., Zarlenga, D. S., Wang, Z., Abubucker, S., Martin, J., Taylor, C. M., Yin, Y., Fulton, L., Minx, P., Yang, S. P., Warren, W. C., Fulton, R. S., Bhonagiri, V., Zhang, X., Hallsworth-Pepin, K., Clifton, S.W., McCarter, J. P., Appleton, J., Mardis, E. R. and Wilson, R. K. (2011). The draft genome of the parasitic nematode Trichinella spiralis. Nature Genetics 43, 228-235. doi: 10.1038/ng.769.
-
(2011)
Nature Genetics
, vol.43
, pp. 228-235
-
-
Mitreva, M.1
Jasmer, D.P.2
Zarlenga, D.S.3
Wang, Z.4
Abubucker, S.5
Martin, J.6
Taylor, C.M.7
Yin, Y.8
Fulton, L.9
Minx, P.10
Yang, S.P.11
Warren, W.C.12
Fulton, R.S.13
Bhonagiri, V.14
Zhang, X.15
Hallsworth-Pepin, K.16
Clifton, S.W.17
McCarter, J.P.18
Appleton, J.19
Mardis, E.R.20
Wilson, R.K.21
more..
-
68
-
-
84881199845
-
A synthesis of our current knowledge of philometrid nematodes, a group of increasingly important fish parasites
-
Moravec, F. and de Buron, I. (2013). A synthesis of our current knowledge of philometrid nematodes, a group of increasingly important fish parasites. Folia Parasitologica (Praha) 60, 81-101.
-
(2013)
Folia Parasitologica (Praha)
, vol.60
, pp. 81-101
-
-
Moravec, F.1
De Buron, I.2
-
69
-
-
78650050018
-
Scaffolding a Caenorhabditis nematode genome with RNA-seq
-
Mortazavi, A., Schwarz, E. M., Williams, B., Schaeffer, L., Antoshechkin, I., Wold, B. J. and Sternberg, P.W. (2010). Scaffolding a Caenorhabditis nematode genome with RNA-seq. Genome Research 20, 1740-1747. oi: 10.1101/gr.111021.110.
-
(2010)
Genome Research
, vol.20
, pp. 1740-1747
-
-
Mortazavi, A.1
Schwarz, E.M.2
Williams, B.3
Schaeffer, L.4
Antoshechkin, I.5
Wold, B.J.6
Sternberg, P.W.7
-
70
-
-
84866360576
-
Nematode-bacterium symbioses-cooperation and conflict revealed in the omics age
-
Murfin, K. E., Dillman, A. R., Foster, J. M., Bulgheresi, S., Slatko, B. E., Sternberg, P.W. and Goodrich-Blair, H. (2012). Nematode-bacterium symbioses-cooperation and conflict revealed in the "omics" age. Biological Bulletin 223, 85-102.
-
(2012)
Biological Bulletin
, vol.223
, pp. 85-102
-
-
Murfin, K.E.1
Dillman, A.R.2
Foster, J.M.3
Bulgheresi, S.4
Slatko, B.E.5
Sternberg, P.W.6
Goodrich-Blair, H.7
-
71
-
-
34547794136
-
Molecular phylogeny of clade III nematodes reveals multiple origins of tissue parasitism
-
Nadler, S. A., Carreno, R. A., Mejia-Madrid, H., Ullberg, J., Pagan, C., Houston, R. and Hugot, J. P. (2007). Molecular phylogeny of clade III nematodes reveals multiple origins of tissue parasitism. Parasitology 134, 1421-1442.
-
(2007)
Parasitology
, vol.134
, pp. 1421-1442
-
-
Nadler, S.A.1
Carreno, R.A.2
Mejia-Madrid, H.3
Ullberg, J.4
Pagan, C.5
Houston, R.6
Hugot, J.P.7
-
73
-
-
0029136031
-
Wolbachia pipientis: Symbiont or parasite?
-
O'Neill, S. L. (1995). Wolbachia pipientis: symbiont or parasite? Parasitology Today 11, 168-169.
-
(1995)
Parasitology Today
, vol.11
, pp. 168-169
-
-
O'Neill, S.L.1
-
74
-
-
54149092490
-
Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism
-
Opperman, C. H., Bird, D. M., Williamson, V. M., Rokhsar, D. S., Burke, M., Cohn, J., Cromer, J., Diener, S., Gajan, J., Graham, S., Houfek, T. D., Liu, Q., Mitros, T., Schaff, J., Schaffer, R., Scholl, E., Sosinski, B. R., Thomas, V. P. and Windham, E. (2008). Sequence and genetic map of Meloidogyne hapla: a compact nematode genome for plant parasitism. Proceedings of the National Academy of Sciences USA 105, 14802-14807. doi: 10.1073/pnas.0805946105.
-
(2008)
Proceedings of the National Academy of Sciences USA
, vol.105
, pp. 14802-14807
-
-
Opperman, C.H.1
Bird, D.M.2
Williamson, V.M.3
Rokhsar, D.S.4
Burke, M.5
Cohn, J.6
Cromer, J.7
Diener, S.8
Gajan, J.9
Graham, S.10
Houfek, T.D.11
Liu, Q.12
Mitros, T.13
Schaff, J.14
Schaffer, R.15
Scholl, E.16
Sosinski, B.R.17
Thomas, V.P.18
Windham, E.19
-
75
-
-
79960977751
-
Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences
-
Park, J. K., Sultana, T., Lee, S. H., Kang, S., Kim, H. K., Min, G. S., Eom, K. S. and Nadler, S. A. (2011). Monophyly of clade III nematodes is not supported by phylogenetic analysis of complete mitochondrial genome sequences. BMC Genomics 12, 392. doi: 10.1186/1471-2164-12-392.
-
(2011)
BMC Genomics
, vol.12
, pp. 392
-
-
Park, J.K.1
Sultana, T.2
Lee, S.H.3
Kang, S.4
Kim, H.K.5
Min, G.S.6
Eom, K.S.7
Nadler, S.A.8
-
76
-
-
0037433041
-
SimiTri-visualizing similarity relationships for groups of sequences
-
Parkinson, J. and Blaxter, M. (2003). SimiTri-visualizing similarity relationships for groups of sequences. Bioinformatics 19, 390-395.
-
(2003)
Bioinformatics
, vol.19
, pp. 390-395
-
-
Parkinson, J.1
Blaxter, M.2
-
77
-
-
9644260489
-
A transcriptomic analysis of the phylum Nematoda
-
Parkinson, J., Mitreva, M., Whitton, C., Thomson, M., Daub, J., Martin, J., Schmid, R., Hall, N., Barrell, B., Waterston, R. H., McCarter, J. P. and Blaxter, M. L. (2004). A transcriptomic analysis of the phylum Nematoda. Nature Genetics 36, 1259-1267.
-
(2004)
Nature Genetics
, vol.36
, pp. 1259-1267
-
-
Parkinson, J.1
Mitreva, M.2
Whitton, C.3
Thomson, M.4
Daub, J.5
Martin, J.6
Schmid, R.7
Hall, N.8
Barrell, B.9
Waterston, R.H.10
McCarter, J.P.11
Blaxter, M.L.12
-
78
-
-
34249848751
-
CEGMA: A pipeline to accurately annotate core genes in eukaryotic genomes
-
Parra, G., Bradnam, K. and Korf, I. (2007). CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes. Bioinformatics 23, 1061-1067. doi: 10.1093/bioinformatics/btm071.
-
(2007)
Bioinformatics
, vol.23
, pp. 1061-1067
-
-
Parra, G.1
Bradnam, K.2
Korf, I.3
-
81
-
-
79551564851
-
The many roads to parasitism: A tale of convergence
-
Poulin, R. (2011). The many roads to parasitism: a tale of convergence. Advances in Parasitology 74, 1-40. doi: 10.1016/B978-0-12-385897-9.00001-X.
-
(2011)
Advances in Parasitology
, vol.74
, pp. 1-40
-
-
Poulin, R.1
-
82
-
-
84922518966
-
Evolution of parasitism along convergent lines: From ecology to genomics
-
Poulin, R. and Randhawa, H. S. (2013). Evolution of parasitism along convergent lines: from ecology to genomics. Parasitology 11, 1-10. doi: 10.1017/S0031182013001674.
-
(2013)
Parasitology
, vol.11
, pp. 1-10
-
-
Poulin, R.1
Randhawa, H.S.2
-
83
-
-
0343284848
-
Causes and consequences of life history variation in parasitic nematodes
-
(ed. Griffin, C. T., Gwynn, R. L. and Masson, J. P. European Commission, Brussels, Belgium
-
Read, A. F. and Skorping, A. (1995a). Causes and consequences of life history variation in parasitic nematodes. In Ecology and Transmission Strategies of Entomopathogenic Nematodes (COST 819) (ed. Griffin, C. T., Gwynn, R. L. and Masson, J. P.), pp. 58-68. European Commission, Brussels, Belgium.
-
(1995)
Ecology and Transmission Strategies of Entomopathogenic Nematodes (COST 819)
, pp. 58-68
-
-
Read, A.F.1
Skorping, A.2
-
84
-
-
0029100003
-
The evolution of tissue migration by parasitic nematode larvae
-
Read, A. F. and Skorping, A. (1995b). The evolution of tissue migration by parasitic nematode larvae. Parasitology 111, 359-371.
-
(1995)
Parasitology
, vol.111
, pp. 359-371
-
-
Read, A.F.1
Skorping, A.2
-
85
-
-
0027834529
-
Phoretic association between the dauerjuveniles of Rhabditis stammeri (Rhabditidae) and life history stages of the burying beetle Nicrophorus vespilloides (Coleoptera: Silphidae
-
Richter, S. (1993). Phoretic association between the dauerjuveniles of Rhabditis stammeri (Rhabditidae) and life history stages of the burying beetle Nicrophorus vespilloides (Coleoptera: Silphidae). Nematologica 39, 346-355.
-
(1993)
Nematologica
, vol.39
, pp. 346-355
-
-
Richter, S.1
-
86
-
-
84869235470
-
Rather than by direct acquisition via lateral gene transfer, GHF5 cellulases were passed on from early Pratylenchidae to rootknot and cyst nematodes
-
Rybarczyk-Mydlowska, K., Maboreke, H. R., van Megen, H., van den Elsen, S., Mooyman, P., Smant, G., Bakker, J. and Helder, J. (2012). Rather than by direct acquisition via lateral gene transfer, GHF5 cellulases were passed on from early Pratylenchidae to rootknot and cyst nematodes. BMC Evolutionary Biology 12, 221. doi: 10.1186/1471-2148-12-221.
-
(2012)
BMC Evolutionary Biology
, vol.12
, pp. 221
-
-
Rybarczyk-Mydlowska, K.1
Maboreke, H.R.2
Van Megen, H.3
Van Den Elsen, S.4
Mooyman, P.5
Smant, G.6
Bakker, J.7
Helder, J.8
-
87
-
-
84891029458
-
The genome of Romanomermis culicivorax: Revealing fundamental changes in the core developmental genetic toolkit in Nematoda
-
Schiffer, P. H., Kroiher, M., Kraus, C., Koutsovoulos, G. D., Kumar, S., Camps, J. I., Nsah, N. A., Stappert, D., Morris, K., Heger, P., Altmuller, J., Frommolt, P., Nurnberg, P., Thomas, W. K., Blaxter, M. L. and Schierenberg, E. (2013). The genome of Romanomermis culicivorax: revealing fundamental changes in the core developmental genetic toolkit in Nematoda. BMC Genomics 14, 923. doi: 10.1186/1471-2164-14-923.
-
(2013)
BMC Genomics
, vol.14
, pp. 923
-
-
Schiffer, P.H.1
Kroiher, M.2
Kraus, C.3
Koutsovoulos, G.D.4
Kumar, S.5
Camps, J.I.6
Nsah, N.A.7
Stappert, D.8
Morris, K.9
Heger, P.10
Altmuller, J.11
Frommolt, P.12
Nurnberg, P.13
Thomas, W.K.14
Blaxter, M.L.15
Schierenberg, E.16
-
88
-
-
0001101181
-
Phylogenetic relationships of the Nematomorpha - A discussion of current hypotheses
-
Schmidt-Rhaesa, A. (1997). Phylogenetic relationships of the Nematomorpha-a discussion of current hypotheses. Zoologischer Anzeiger, Jena 236, 203-216.
-
(1997)
Zoologischer Anzeiger, Jena
, vol.236
, pp. 203-216
-
-
Schmidt-Rhaesa, A.1
-
89
-
-
0026077009
-
Life history covariation in intestinal nematodes of mammals
-
Skorping, A., Read, A. F. and Keymer, A. E. (1991). Life history covariation in intestinal nematodes of mammals. Oikos 60, 365-372.
-
(1991)
Oikos
, vol.60
, pp. 365-372
-
-
Skorping, A.1
Read, A.F.2
Keymer, A.E.3
-
90
-
-
13144267704
-
Endogenous cellulases in animals: Isolation of beta-1, 4-endoglucanase genes from two species of plant-parasitic cyst nematodes
-
Smant, G., Stokkermans, J. P., Yan, Y., de Boer, J. M., Baum, T. J., Wang, X., Hussey, R. S., Gommers, F. J., Henrissat, B., Davis, E. L., Helder, J., Schots, A. and Bakker, J. (1998). Endogenous cellulases in animals: isolation of beta-1, 4-endoglucanase genes from two species of plant-parasitic cyst nematodes. Proceedings of the National Academy of Sciences USA 95, 4906-4911.
-
(1998)
Proceedings of the National Academy of Sciences USA
, vol.95
, pp. 4906-4911
-
-
Smant, G.1
Stokkermans, J.P.2
Yan, Y.3
De Boer, J.M.4
Baum, T.J.5
Wang, X.6
Hussey, R.S.7
Gommers, F.J.8
Henrissat, B.9
Davis, E.L.10
Helder, J.11
Schots, A.12
Bakker, J.13
-
91
-
-
84876364932
-
The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
-
Srinivasan, J., Dillman, A. R., Macchietto, M. G., Heikkinen, L., Lakso, M., Fracchia, K. M., Antoshechkin, I., Mortazavi, A., Wong, G. and Sternberg, P.W. (2013). The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle. Genetics 193, 1279-1295. doi: 10.1534/genetics.112. 148809.
-
(2013)
Genetics
, vol.193
, pp. 1279-1295
-
-
Srinivasan, J.1
Dillman, A.R.2
MacChietto, M.G.3
Heikkinen, L.4
Lakso, M.5
Fracchia, K.M.6
Antoshechkin, I.7
Mortazavi, A.8
Wong, G.9
Sternberg, P.W.10
-
92
-
-
4243088097
-
The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics
-
Stein, L. D., Bao, Z., Blasiar, D., Blumenthal, T., Brent, M. R., Chen, N., Chinwalla, A., Clarke, L., Clee, C., Coghlan, A., Coulson, A., D'Eustachio, P., Fitch, D. H., Fulton, L. A., Fulton, R. E., Griffiths-Jones, S., Harris, T.W., Hillier, L.W., Kamath, R., Kuwabara, P. E., Mardis, E. R., Marra, M. A., Miner, T. L., Minx, P., Mullikin, J. C., Plumb, R.W., Rogers, J., Schein, J. E., Sohrmann, M., Spieth, J., Stajich, J. E., Wei, C., Willey, D., Wilson, R. K., Durbin, R. and Waterston, R. H. (2003). The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. PLOS Biology 1, E45
-
(2003)
PLOS Biology
, vol.1
, pp. E45
-
-
Stein, L.D.1
Bao, Z.2
Blasiar, D.3
Blumenthal, T.4
Brent, M.R.5
Chen, N.6
Chinwalla, A.7
Clarke, L.8
Clee, C.9
Coghlan, A.10
Coulson, A.11
D'Eustachio, P.12
Fitch, D.H.13
Fulton, L.A.14
Fulton, R.E.15
Griffiths-Jones, S.16
Harris, T.W.17
Hillier, L.W.18
Kamath, R.19
Kuwabara, P.E.20
Mardis, E.R.21
Marra, M.A.22
Miner, T.L.23
Minx, P.24
Mullikin, J.C.25
Plumb, R.W.26
Rogers, J.27
Schein, J.E.28
Sohrmann, M.29
Spieth, J.30
Stajich, J.E.31
Wei, C.32
Willey, D.33
Wilson, R.K.34
Durbin, R.35
Waterston, R.H.36
more..
-
94
-
-
80053320444
-
Preadaptive plateau in Rhabditida (Nematoda) allowed the repeated evolution of zooparasites, with an outlook on evolution of life cycles within Spiroascarida
-
Sudhaus, W. (2010). Preadaptive plateau in Rhabditida (Nematoda) allowed the repeated evolution of zooparasites, with an outlook on evolution of life cycles within Spiroascarida. Palaeodiversity 3 (Suppl.), 117-130.
-
(2010)
Palaeodiversity
, vol.3
, pp. 117-130
-
-
Sudhaus, W.1
-
95
-
-
84872347385
-
Comparative analysis of complete mitochondrial genome sequences confirms independent origins of plantparasitic nematodes
-
Sultana, T., Kim, J., Lee, S. H., Han, H., Kim, S., Min, G. S., Nadler, S. A. and Park, J. K. (2013). Comparative analysis of complete mitochondrial genome sequences confirms independent origins of plantparasitic nematodes. Evolutionary Biology 13, 12. doi: 10.1186/1471-2148-13-12.
-
(2013)
Evolutionary Biology
, vol.13
, pp. 12
-
-
Sultana, T.1
Kim, J.2
Lee, S.H.3
Han, H.4
Kim, S.5
Min, G.S.6
Nadler, S.A.7
Park, J.K.8
-
96
-
-
0032509302
-
Genome sequence of the nematode C elegans: A platform for investigating biology
-
The C. elegans Genome Sequencing Consortium
-
The C. elegans Genome Sequencing Consortium (1998). Genome sequence of the nematode C. elegans: a platform for investigating biology. Science 282, 2012-2018.
-
(1998)
Science
, vol.282
, pp. 2012-2018
-
-
-
97
-
-
0034521952
-
Occurrence of novel verrucomicrobial species, endosymbiotic and associated with parthenogenesis in Xiphinema americanum-group species (Nematoda, Longidoridae)
-
Vandekerckhove, T. T., Willems, A., Gillis, M. and Coomans, A. (2000). Occurrence of novel verrucomicrobial species, endosymbiotic and associated with parthenogenesis in Xiphinema americanum-group species (Nematoda, Longidoridae). International Journal of Systematic and Evolutionary Microbiology 50, 2197-2205.
-
(2000)
International Journal of Systematic and Evolutionary Microbiology
, vol.50
, pp. 2197-2205
-
-
Vandekerckhove, T.T.1
Willems, A.2
Gillis, M.3
Coomans, A.4
-
98
-
-
71049181729
-
A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences
-
van Megen, H., van den Elsen, S., Holterman, M., Karssen, G., Mooyman, P., Bongers, T., Holovachov, O., Bakker, J. and Helder, J. (2009). A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences. Nematology 11, 927-950.
-
(2009)
Nematology
, vol.11
, pp. 927-950
-
-
Van Megen, H.1
Van Den Elsen, S.2
Holterman, M.3
Karssen, G.4
Mooyman, P.5
Bongers, T.6
Holovachov, O.7
Bakker, J.8
Helder, J.9
-
99
-
-
84869090330
-
Silencing of germline-expressed genes by DNA elimination in somatic cells
-
Wang, J., Mitreva, M., Berriman, M., Thorne, A., Magrini, V., Koutsovoulos, G., Kumar, S., Blaxter, M. L. and Davis, R. E. (2012). Silencing of germline-expressed genes by DNA elimination in somatic cells. Developmental Cell 23, 1072-1080. doi: 10.1016/j.devcel.2012.09.020.
-
(2012)
Developmental Cell
, vol.23
, pp. 1072-1080
-
-
Wang, J.1
Mitreva, M.2
Berriman, M.3
Thorne, A.4
Magrini, V.5
Koutsovoulos, G.6
Kumar, S.7
Blaxter, M.L.8
Davis, R.E.9
-
101
-
-
84877345730
-
Interdomain lateral gene transfer of an essential ferrochelatase gene in human parasitic nematodes
-
Wu, B., Novelli, J., Jiang, D., Dailey, H. A., Landmann, F., Ford, L., Taylor, M. J., Carlow, C. K., Kumar, S., Foster, J. M. and Slatko, B. E. (2013). Interdomain lateral gene transfer of an essential ferrochelatase gene in human parasitic nematodes. Proceedings of the National Academy of Sciences USA 110, 7748-7753. doi: 10.1073/pnas.1304049110.
-
(2013)
Proceedings of the National Academy of Sciences USA
, vol.110
, pp. 7748-7753
-
-
Wu, B.1
Novelli, J.2
Jiang, D.3
Dailey, H.A.4
Landmann, F.5
Ford, L.6
Taylor, M.J.7
Carlow, C.K.8
Kumar, S.9
Foster, J.M.10
Slatko, B.E.11
|