메뉴 건너뛰기




Volumn 12, Issue 1, 2012, Pages

Rather than by direct acquisition via lateral gene transfer, GHF5 cellulases were passed on from early Pratylenchidae to root-knot and cyst nematodes

Author keywords

Cellulase; Lateral gene transfer; Nematodes; Plant parasitism

Indexed keywords

BAYESIAN ANALYSIS; BIODIVERSITY; DATA PROCESSING; DEGRADATION; DNA; ENZYME ACTIVITY; GENE TRANSFER; GENOMICS; NEMATODE; PARASITE; PATHOGENICITY; PROKARYOTE; SYMBIONT;

EID: 84869235470     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-12-221     Document Type: Article
Times cited : (30)

References (35)
  • 1
    • 58449090122 scopus 로고    scopus 로고
    • An ancient horizontal gene transfer between mosquito and the endosymbiotic bacterium Wolbachia pipientis
    • 10.1093/molbev/msn253 18988686
    • An ancient horizontal gene transfer between mosquito and the endosymbiotic bacterium Wolbachia pipientis. Woolfit M, Iturbe-Ormaetxe I, McGraw EA, O'Neill SL, Mol Biol Evol 2009 26 2 367 374 10.1093/molbev/msn253 18988686
    • (2009) Mol Biol Evol , vol.26 , Issue.2 , pp. 367-374
    • Woolfit, M.1    Iturbe-Ormaetxe, I.2    McGraw, E.A.3    O'Neill, S.L.4
  • 2
    • 64049094506 scopus 로고    scopus 로고
    • Aphids acquired symbiotic genes via lateral gene transfer
    • 10.1186/1741-7007-7-12 19284544
    • Aphids acquired symbiotic genes via lateral gene transfer. Nikoh N, Nakabachi A, BMC Biology 2009 7 12 10.1186/1741-7007-7-12 19284544
    • (2009) BMC Biology , vol.7 , pp. 12
    • Nikoh, N.1    Nakabachi, A.2
  • 3
    • 45849089569 scopus 로고    scopus 로고
    • Massive horizontal gene transfer in bdelloid rotifers
    • DOI 10.1126/science.1156407
    • Massive horizontal gene transfer in bdelloid rotifers. Gladyshev EA, Meselson M, Arkhipova IR, Science 2008 320 5880 1210 1213 10.1126/science. 1156407 18511688 (Pubitemid 351929508)
    • (2008) Science , vol.320 , Issue.5880 , pp. 1210-1213
    • Gladyshev, E.A.1    Meselson, M.2    Arkhipova, I.R.3
  • 7
    • 0037014667 scopus 로고    scopus 로고
    • A polygalacturonase of animal origin isolated from the root-knot nematode Meloidogyne incognita
    • DOI 10.1016/S0014-5793(02)02906-X, PII S001457930202906X
    • A polygalacturonase of animal origin isolated from the root- knot nematode Meloidogyne incognita. Jaubert S, Laffaire JB, Abad P, Rosso MN, FEBS Lett 2002 522 1-3 109 112 12095628 (Pubitemid 34722507)
    • (2002) FEBS Letters , vol.522 , Issue.1-3 , pp. 109-112
    • Jaubert, S.1    Laffaire, J.-B.2    Abad, P.3    Rosso, M.-N.4
  • 10
    • 4744355471 scopus 로고
    • Nemic relationships and the origin of plant parasitic nematodes
    • New York: Academic Press Inc Zuckerman BM, Mai WF, Rohde RA
    • Nemic relationships and the origin of plant parasitic nematodes. Maggenti AR, Plant parasitic nematodes New York: Academic Press Inc, Zuckerman BM, Mai WF, Rohde RA, 1971 65 81
    • (1971) Plant Parasitic Nematodes , pp. 65-81
    • Maggenti, A.R.1
  • 11
    • 0032404453 scopus 로고    scopus 로고
    • You are what you eat: A gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes
    • DOI 10.1016/S0168-9525(98)01494-2, PII S0168952598014942
    • You are what you eat: A gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes. Ford Doolittle W, Trends Genet 1998 14 8 307 311 10.1016/S0168-9525(98)01494-2 9724962 (Pubitemid 28378267)
    • (1998) Trends in Genetics , vol.14 , Issue.8 , pp. 307-311
    • Ford Doolittle, W.1
  • 12
    • 45849089569 scopus 로고    scopus 로고
    • Massive horizontal gene transfer in bdelloid rotifers
    • DOI 10.1126/science.1156407
    • Massive horizontal gene transfer in bdelloid rotifers. Gladyshev EA, Meselson M, Arkhipova IR, Science 2008 320 5880 1210 1213 10.1126/science. 1156407 18511688 (Pubitemid 351929508)
    • (2008) Science , vol.320 , Issue.5880 , pp. 1210-1213
    • Gladyshev, E.A.1    Meselson, M.2    Arkhipova, I.R.3
  • 13
    • 77349118476 scopus 로고    scopus 로고
    • Expression profiling and cross-species RNA interference (RNAi) of desiccation-induced transcripts in the anhydrobiotic nematode Aphelenchus avenae
    • 10.1186/1471-2199-11-6 20085654
    • Expression profiling and cross-species RNA interference (RNAi) of desiccation-induced transcripts in the anhydrobiotic nematode Aphelenchus avenae. Reardon W, Chakrabortee S, Pereira TC, Tyson T, Banton MC, Dolan KM, Culleton BA, Wise MJ, Burnell AM, Tunnacliffe A, BMC Mol Biol 2010 11 6 10.1186/1471-2199-11-6 20085654
    • (2010) BMC Mol Biol , vol.11 , pp. 6
    • Reardon, W.1    Chakrabortee, S.2    Pereira, T.C.3    Tyson, T.4    Banton, M.C.5    Dolan, K.M.6    Culleton, B.A.7    Wise, M.J.8    Burnell, A.M.9    Tunnacliffe, A.10
  • 14
    • 0032702750 scopus 로고    scopus 로고
    • Desiccation stress and recovery in the anhydrobiotic nematode Ditylenchus dipsaci (Nematoda: Anguinidae)
    • Desiccation stress and recovery in the anhydrobiotic nematode Ditylenchus dipsaci (Nematoda: Anguinidae). Wharton DA, Aalders O, Eur J Entomol 1999 96 2 199 203
    • (1999) Eur J Entomol , vol.96 , Issue.2 , pp. 199-203
    • Wharton, D.A.1    Aalders, O.2
  • 15
    • 46749117604 scopus 로고    scopus 로고
    • Systemic RNAi mediated gene silencing in the anhydrobiotic nematode Panagrolaimus superbus
    • DOI 10.1186/1471-2199-9-58
    • Systemic RNAi mediated gene silencing in the anhydrobiotic nematode Panagrolaimus superbus. Shannon AJ, Tyson T, Dix I, Boyd J, Burnell AM, BMC Mol Biol 2008 9 58 10.1186/1471-2199-9-58 18565215 (Pubitemid 351943970)
    • (2008) BMC Molecular Biology , vol.9 , pp. 58
    • Shannon, A.J.1    Tyson, T.2    Dix, I.3    Boyd, J.4    Burnell, A.M.5
  • 17
    • 78049316906 scopus 로고    scopus 로고
    • Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes
    • 10.1073/pnas.1008486107 20876108
    • Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes. Danchin EGJ, Rosso MN, Vieira P, De Almeida-Engler J, Coutinho PM, Henrissat B, Abad P, Proc Natl Acad Sci USA 2010 107 41 17651 17656 10.1073/pnas.1008486107 20876108
    • (2010) Proc Natl Acad Sci USA , vol.107 , Issue.41 , pp. 17651-17656
    • Danchin, E.G.J.1    Rosso, M.N.2    Vieira, P.3    De Almeida-Engler, J.4    Coutinho, P.M.5    Henrissat, B.6    Abad, P.7
  • 19
    • 47749114561 scopus 로고    scopus 로고
    • Molecular phylogeny of the Tylenchina and evolution of the female gonoduct (Nematoda: Rhabditida)
    • 10.1016/j.ympev.2008.04.011 18502668
    • Molecular phylogeny of the Tylenchina and evolution of the female gonoduct (Nematoda: Rhabditida). Bert W, Leliaert F, Vierstraete AR, Vanfleteren JR, Borgonie G, Mol Phylogenet Evol 2008 48 2 728 744 10.1016/j.ympev.2008.04. 011 18502668
    • (2008) Mol Phylogenet Evol , vol.48 , Issue.2 , pp. 728-744
    • Bert, W.1    Leliaert, F.2    Vierstraete, A.R.3    Vanfleteren, J.R.4    Borgonie, G.5
  • 20
    • 62249185296 scopus 로고    scopus 로고
    • Small subunit rDNA-based phylogeny of the Tylenchida sheds light on relationships among some high-impact plant-parasitic nematodes & the evolution of plant feeding
    • 10.1094/PHYTO-99-3-0227 19203274
    • Small subunit rDNA-based phylogeny of the Tylenchida sheds light on relationships among some high-impact plant-parasitic nematodes & the evolution of plant feeding. Holterman M, Karssen G, van den Elsen S, van Megen H, Bakker J, Helder J, Phytopathology 2009 99 3 227 235 10.1094/PHYTO-99-3-0227 19203274
    • (2009) Phytopathology , vol.99 , Issue.3 , pp. 227-235
    • Holterman, M.1    Karssen, G.2    Van Den Elsen, S.3    Van Megen, H.4    Bakker, J.5    Helder, J.6
  • 22
    • 60049092694 scopus 로고    scopus 로고
    • Evolution of GHF5 endoglucanase gene structure in plant-parasitic nematodes: No evidence for an early domain shuffling event
    • 10.1186/1471-2148-8-305 18980666
    • Evolution of GHF5 endoglucanase gene structure in plant-parasitic nematodes: No evidence for an early domain shuffling event. Kyndt T, Haegeman A, Gheysen G, BMC Evol Biol 2008 8 305 10.1186/1471-2148-8-305 18980666
    • (2008) BMC Evol Biol , vol.8 , pp. 305
    • Kyndt, T.1    Haegeman, A.2    Gheysen, G.3
  • 24
    • 33748158280 scopus 로고    scopus 로고
    • Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown clades
    • DOI 10.1093/molbev/msl044
    • Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown clades. Holterman M, van der Wurff A, van den Elsen S, van Megen H, Bongers T, Holovachov O, Bakker J, Helder J, Mol Biol Evol 2006 23 9 1792 1800 10.1093/molbev/msl044 16790472 (Pubitemid 44309773)
    • (2006) Molecular Biology and Evolution , vol.23 , Issue.9 , pp. 1792-1800
    • Holterman, M.1    Van Der Wurff, A.2    Van Den Elsen, S.3    Van Megen, H.4    Bongers, T.5    Holovachov, O.6    Bakker, J.7    Helder, J.8
  • 25
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Hall TA, Nucleic Acids Symp Ser 1999 41 95 98
    • (1999) Nucleic Acids Symp ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 27
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML web servers
    • 10.1080/10635150802429642 18853362
    • A rapid bootstrap algorithm for the RAxML web servers. Stamatakis A, Hoover P, Rougemont J, Syst Biol 2008 57 5 758 771 10.1080/10635150802429642 18853362
    • (2008) Syst Biol , vol.57 , Issue.5 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 28
    • 1642326863 scopus 로고    scopus 로고
    • Developmental expression and biochemical properties of a β-1,4-endoglucanase family in the soybean cyst nematode, Heterodera glycines
    • DOI 10.1111/j.1364-3703.2004.00209.x
    • Developmental expression and biochemical properties of a β-1,4-endoglucanase family in the soybean cyst nematode, Heterodera glycines. Gao B, Allen R, Davis EL, Baum TJ, Hussey RS, Mol Plant Pathol 2004 5 2 93 104 10.1111/j.1364-3703.2004.00209.x 20565586 (Pubitemid 38370324)
    • (2004) Molecular Plant Pathology , vol.5 , Issue.2 , pp. 93-104
    • Gao, B.1    Allen, R.2    Davis, E.L.3    Baum, T.J.4    Hussey, R.S.5
  • 29
    • 34249864393 scopus 로고    scopus 로고
    • Cloning and identification of novel cellulase genes from uncultured microorganisms in rabbit cecum and characterization of the expressed cellulases
    • DOI 10.1007/s00253-006-0820-9
    • Cloning and identification of novel cellulase genes from uncultured microorganisms in rabbit cecum and characterization of the expressed cellulases. Feng Y, Duan CJ, Pang H, Mo XC, Wu CF, Yu Y, Hu YL, Wei J, Tang JL, Feng JX, Appl Microbiol Biotechnol 2007 75 2 319 328 10.1007/s00253-006-0820-9 17216439 (Pubitemid 46866527)
    • (2007) Applied Microbiology and Biotechnology , vol.75 , Issue.2 , pp. 319-328
    • Feng, Y.1    Duan, C.-J.2    Pang, H.3    Mo, X.-C.4    Wu, C.-F.5    Yu, Y.6    Hu, Y.-L.7    Wei, J.8    Tang, J.-L.9    Feng, J.-X.10
  • 30
    • 0032487319 scopus 로고    scopus 로고
    • Genomic organization of four β-1,4-endoglucanase genes in plant-parasitic cyst nematodes and its evolutionary implications
    • DOI 10.1016/S0378-1119(98)00413-2, PII S0378111998004132
    • Genomic organization of four beta-1,4-endoglucanase genes in plant-parasitic cyst nematodes and its evolutionary implications. Yan YT, Smant G, Stokkermans J, Qin L, Helder J, Baum T, Schots A, Davis E, Gene 1998 220 1-2 61 70 9767113 (Pubitemid 28470323)
    • (1998) Gene , vol.220 , Issue.1-2 , pp. 61-70
    • Yan, Y.1    Smant, G.2    Stokkermans, J.3    Qin, L.4    Helder, J.5    Baum, T.6    Schots, A.7    Davis, E.8
  • 31
    • 71049145380 scopus 로고    scopus 로고
    • Analysis of expressed sequence tags and identification of genes encoding cell-wall-degrading enzymes from the fungivorous nematode Aphelenchus avenae
    • 10.1186/1471-2164-10-525 19917084
    • Analysis of expressed sequence tags and identification of genes encoding cell-wall-degrading enzymes from the fungivorous nematode Aphelenchus avenae. Karim N, Jones JT, Okada H, Kikuchi T, BMC Genomics 2009 10 525 10.1186/1471-2164-10-525 19917084
    • (2009) BMC Genomics , vol.10 , pp. 525
    • Karim, N.1    Jones, J.T.2    Okada, H.3    Kikuchi, T.4
  • 33
    • 0003131773 scopus 로고    scopus 로고
    • Systematic Position and Phylogeny
    • London, UK: Taylor & Francis Lee DL
    • Systematic Position and Phylogeny. De Ley P, Blaxter ML, The Biology of Nematodes London, UK: Taylor & Francis, Lee DL, 2002 1 30
    • (2002) The Biology of Nematodes , pp. 1-30
    • De Ley, P.1    Blaxter, M.L.2
  • 35
    • 84864535558 scopus 로고    scopus 로고
    • Expressional and functional variation of horizontally acquired cellulases in the nematode Pristionchus pacificus
    • 10.1016/j.gene.2012.07.013 22814175
    • Expressional and functional variation of horizontally acquired cellulases in the nematode Pristionchus pacificus. Schuster LN, Sommer RJ, Gene 2012 506 2 274 282 10.1016/j.gene.2012.07.013 22814175
    • (2012) Gene , vol.506 , Issue.2 , pp. 274-282
    • Schuster, L.N.1    Sommer, R.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.