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Volumn 396, Issue 2, 2015, Pages 145-152

Optogenetics for gene expression in mammalian cells

Author keywords

gene expression; mammalian cell; optogenetics; photoreceptor; synthetic biology

Indexed keywords

BLUE LIGHT; CALCIUM TRANSPORT; DNA BINDING; GENE EXPRESSION; GENE EXPRESSION SYSTEM; ILLUMINATION; LIGHT; MAMMAL CELL; NONHUMAN; OPTOGENETICS; PRIORITY JOURNAL; RED LIGHT; REVIEW; ANIMAL; GENETICS; HUMAN; PROCEDURES;

EID: 84922295308     PISSN: 14316730     EISSN: 14374315     Source Type: Journal    
DOI: 10.1515/hsz-2014-0199     Document Type: Review
Times cited : (52)

References (59)
  • 2
    • 26444621497 scopus 로고    scopus 로고
    • Millisecond-timescale, genetically targeted optical control of neural activity
    • Boyden, E.S., Zhang, F., Bamberg, E., Nagel, G., and Deisseroth, K. (2005). Millisecond-timescale, genetically targeted optical control of neural activity. Nat. Neurosci. 8, 1263-1268.
    • (2005) Nat. Neurosci. , vol.8 , pp. 1263-1268
    • Boyden, E.S.1    Zhang, F.2    Bamberg, E.3    Nagel, G.4    Deisseroth, K.5
  • 3
    • 84874656353 scopus 로고    scopus 로고
    • Optogenetic protein clustering and signaling activation in mammalian cells
    • Bugaj, L.J., Choksi, A.T., Mesuda, C.K., Kane, R.S., and Schaffer, D.V. (2013). Optogenetic protein clustering and signaling activation in mammalian cells. Nat. Methods 10, 249-252.
    • (2013) Nat. Methods , vol.10 , pp. 249-252
    • Bugaj, L.J.1    Choksi, A.T.2    Mesuda, C.K.3    Kane, R.S.4    Schaffer, D.V.5
  • 4
    • 84865989291 scopus 로고    scopus 로고
    • Photoinduced damage to cellular DNA: Direct and photosensitized reactions
    • Cadet, J., Mouret, S., Ravanat, J.L., and Douki, T. (2012). Photoinduced damage to cellular DNA: direct and photosensitized reactions. Photochem. Photobiol. 88, 1048-1065.
    • (2012) Photochem. Photobiol. , vol.88 , pp. 1048-1065
    • Cadet, J.1    Mouret, S.2    Ravanat, J.L.3    Douki, T.4
  • 6
    • 84878586112 scopus 로고    scopus 로고
    • A light-triggered protein secretion system
    • Chen, D., Gibson, E.S., and Kennedy, M.J. (2013). A light-triggered protein secretion system. J. Cell Biol. 201, 631-640.
    • (2013) J. Cell Biol. , vol.201 , pp. 631-640
    • Chen, D.1    Gibson, E.S.2    Kennedy, M.J.3
  • 8
    • 84877783598 scopus 로고    scopus 로고
    • Ultraviolet-B-mediated induction of protein-protein interactions in mammalian cells
    • Crefcoeur, R.P., Yin, R., Ulm, R., and Halazonetis, T.D. (2013). Ultraviolet-B-mediated induction of protein-protein interactions in mammalian cells. Nat. Commun. 4, 1779.
    • (2013) Nat. Commun. , vol.4 , pp. 1779
    • Crefcoeur, R.P.1    Yin, R.2    Ulm, R.3    Halazonetis, T.D.4
  • 9
    • 78650362376 scopus 로고    scopus 로고
    • Emerging properties of animal gene regulatory networks
    • Davidson, E.H. (2010). Emerging properties of animal gene regulatory networks. Nature 468, 911-920.
    • (2010) Nature , vol.468 , pp. 911-920
    • Davidson, E.H.1
  • 10
    • 84865285923 scopus 로고    scopus 로고
    • Light-controlled synthetic gene circuits
    • Gardner, L. and Deiters, A. (2012). Light-controlled synthetic gene circuits. Curr. Opin. Chem. Biol. 16, 292-299.
    • (2012) Curr. Opin. Chem. Biol. , vol.16 , pp. 292-299
    • Gardner, L.1    Deiters, A.2
  • 11
    • 55849136898 scopus 로고    scopus 로고
    • Multiple-color optical activation, silencing, and desynchronization of neural activity, with singlespike temporal resolution
    • Han, X. and Boyden, E.S. (2007). Multiple-color optical activation, silencing, and desynchronization of neural activity, with singlespike temporal resolution. PLoS One 2, e299.
    • (2007) PLoS One , vol.2 , pp. e299
    • Han, X.1    Boyden, E.S.2
  • 14
    • 77951107086 scopus 로고    scopus 로고
    • Synthetic biology: Applications come of age
    • Khalil, A.S. and Collins, J.J. (2010). Synthetic biology: applications come of age. Nat. Rev. Genet. 11, 367-379.
    • (2010) Nat. Rev. Genet. , vol.11 , pp. 367-379
    • Khalil, A.S.1    Collins, J.J.2
  • 15
    • 84904568275 scopus 로고    scopus 로고
    • Spatiotemporal control of fibroblast growth factor receptor signals by blue light
    • Kim, N., Kim, J.M., Lee, M., Kim, C.Y., Chang, K.Y., and Heo, W.D. (2014). Spatiotemporal control of fibroblast growth factor receptor signals by blue light. Chem. Biol. 21, 903-912.
    • (2014) Chem. Biol. , vol.21 , pp. 903-912
    • Kim, N.1    Kim, J.M.2    Lee, M.3    Kim, C.Y.4    Chang, K.Y.5    Heo, W.D.6
  • 17
    • 84901843462 scopus 로고    scopus 로고
    • Reversible protein inactivation by optogenetic trapping in cells
    • Lee, S., Park, H., Kyung, T., Kim, N.Y., Kim, S., Kim, J., and Heo, W.D. (2014). Reversible protein inactivation by optogenetic trapping in cells. Nat. Methods 11, 633-636.
    • (2014) Nat. Methods , vol.11 , pp. 633-636
    • Lee, S.1    Park, H.2    Kyung, T.3    Kim, N.Y.4    Kim, S.5    Kim, J.6    Heo, W.D.7
  • 19
    • 70350070364 scopus 로고    scopus 로고
    • Spatiotemporal control of cell signalling using a light-switchable protein interaction
    • Levskaya, A., Weiner, O.D., Lim, W.A., and Voigt, C.A. (2009). Spatiotemporal control of cell signalling using a light-switchable protein interaction. Nature 461, 997-1001.
    • (2009) Nature , vol.461 , pp. 997-1001
    • Levskaya, A.1    Weiner, O.D.2    Lim, W.A.3    Voigt, C.A.4
  • 21
    • 72149090954 scopus 로고    scopus 로고
    • A simple cipher governs DNA recognition by TAL effectors
    • Moscou, M.J. and Bogdanove, A.J. (2009). A simple cipher governs DNA recognition by TAL effectors. Science 326, 1501.
    • (2009) Science , vol.326 , pp. 1501
    • Moscou, M.J.1    Bogdanove, A.J.2
  • 23
    • 84874899853 scopus 로고    scopus 로고
    • Optogenetic tools for mammalian systems
    • Muller, K. and Weber, W. (2013). Optogenetic tools for mammalian systems. Mol. Biosyst. 9, 596-608.
    • (2013) Mol. Biosyst. , vol.9 , pp. 596-608
    • Muller, K.1    Weber, W.2
  • 24
    • 84885578369 scopus 로고    scopus 로고
    • Licht-gesteuerte Kontrolle der Genexpression in Säugerzellen
    • Muller, K. and Zubriggen, M.D. (2013). Licht-gesteuerte Kontrolle der Genexpression in Säugerzellen. BIOspektrum 19, 628-630.
    • (2013) BIOspektrum , vol.19 , pp. 628-630
    • Muller, K.1    Zubriggen, M.D.2
  • 29
    • 84895471220 scopus 로고    scopus 로고
    • Control of gene expression using a red-and far-red light-responsive bi-stable toggle switch
    • Muller, K., Zurbriggen, M.D., and Weber, W. (2014b). Control of gene expression using a red-and far-red light-responsive bi-stable toggle switch. Nat. Protoc. 9, 622-632.
    • (2014) Nat. Protoc. , vol.9 , pp. 622-632
    • Muller, K.1    Zurbriggen, M.D.2    Weber, W.3
  • 32
    • 29044433616 scopus 로고    scopus 로고
    • Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses
    • Nagel, G., Brauner, M., Liewald, J.F., Adeishvili, N., Bamberg, E., and Gottschalk, A. (2005). Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses. Curr. Biol. 15, 2279-2284.
    • (2005) Curr. Biol. , vol.15 , pp. 2279-2284
    • Nagel, G.1    Brauner, M.2    Liewald, J.F.3    Adeishvili, N.4    Bamberg, E.5    Gottschalk, A.6
  • 33
    • 84904480201 scopus 로고    scopus 로고
    • Engineering light-inducible nuclear localization signals for precise spatiotemporal control of protein dynamics in living cells
    • Niopek, D., Benzinger, D., Roensch, J., Draebing, T., Wehler, P., Eils, R., and Di Ventura, B. (2014). Engineering light-inducible nuclear localization signals for precise spatiotemporal control of protein dynamics in living cells. Nat. Commun. 5, 4404.
    • (2014) Nat. Commun. , vol.5 , pp. 4404
    • Niopek, D.1    Benzinger, D.2    Roensch, J.3    Draebing, T.4    Wehler, P.5    Eils, R.6    Di Ventura, B.7
  • 34
    • 84857371657 scopus 로고    scopus 로고
    • From dusk till dawn: One-plasmid systems for lightregulated gene expression
    • Ohlendorf, R., Vidavski, R.R., Eldar, A., Moffat, K., and Moglich, A. (2012). From dusk till dawn: one-plasmid systems for lightregulated gene expression. J. Mol. Biol. 416, 534-542.
    • (2012) J. Mol. Biol. , vol.416 , pp. 534-542
    • Ohlendorf, R.1    Vidavski, R.R.2    Eldar, A.3    Moffat, K.4    Moglich, A.5
  • 35
    • 84872664011 scopus 로고    scopus 로고
    • Optogenetic control of cell function using engineered photoreceptors
    • Pathak, G.P., Vrana, J.D., and Tucker, C.L. (2013). Optogenetic control of cell function using engineered photoreceptors. Biol. Cell 105, 59-72.
    • (2013) Biol. Cell , vol.105 , pp. 59-72
    • Pathak, G.P.1    Vrana, J.D.2    Tucker, C.L.3
  • 37
    • 84867370333 scopus 로고    scopus 로고
    • Light-inducible spatiotemporal control of gene activation by customizable zinc finger transcription factors
    • Polstein, L.R. and Gersbach, C.A. (2012). Light-inducible spatiotemporal control of gene activation by customizable zinc finger transcription factors. J. Am. Chem. Soc. 134, 16480-16483.
    • (2012) J. Am. Chem. Soc. , vol.134 , pp. 16480-16483
    • Polstein, L.R.1    Gersbach, C.A.2
  • 38
    • 0014804804 scopus 로고
    • Phytochrome conversion by ultraviolet light
    • Pratt, L.H. and Butler, W.L. (1970). Phytochrome conversion by ultraviolet light. Photochem. Photobiol. 11, 503-509.
    • (1970) Photochem. Photobiol. , vol.11 , pp. 503-509
    • Pratt, L.H.1    Butler, W.L.2
  • 41
    • 84861457735 scopus 로고    scopus 로고
    • Diverse types of ganglion cell photoreceptors in the mammalian retina
    • Sand, A., Schmidt, T.M., and Kofuji, P. (2012). Diverse types of ganglion cell photoreceptors in the mammalian retina. Prog. Retin. Eye Res. 31, 287-302.
    • (2012) Prog. Retin. Eye Res. , vol.31 , pp. 287-302
    • Sand, A.1    Schmidt, T.M.2    Kofuji, P.3
  • 44
  • 46
    • 84890036078 scopus 로고    scopus 로고
    • Using optogenetics to interrogate the dynamic control of signal transmission by the ras/erk module
    • Toettcher, J.E., Weiner, O.D., and Lim, W.A. (2013). Using optogenetics to interrogate the dynamic control of signal transmission by the ras/erk module. Cell 155, 1422-1434.
    • (2013) Cell , vol.155 , pp. 1422-1434
    • Toettcher, J.E.1    Weiner, O.D.2    Lim, W.A.3
  • 47
    • 0017236898 scopus 로고
    • Effect of room fluorescent light on the deterioration of tissue culture medium
    • Wang, R.J. (1976). Effect of room fluorescent light on the deterioration of tissue culture medium. In Vitro 12, 19-22.
    • (1976) Vitro , vol.12 , pp. 19-22
    • Wang, R.J.1
  • 48
    • 84862776564 scopus 로고    scopus 로고
    • Spatiotemporal control of gene expression by a light-switchable transgene system
    • Wang, X., Chen, X., and Yang, Y. (2012). Spatiotemporal control of gene expression by a light-switchable transgene system. Nat. Methods 9, 266-269.
    • (2012) Nat. Methods , vol.9 , pp. 266-269
    • Wang, X.1    Chen, X.2    Yang, Y.3
  • 51
    • 69949104482 scopus 로고    scopus 로고
    • A genetically encoded photoactivatable Rac controls the motility of living cells
    • Wu, Y.I., Frey, D., Lungu, O.I., Jaehrig, A., Schlichting, I., Kuhlman, B., and Hahn, K.M. (2009). A genetically encoded photoactivatable Rac controls the motility of living cells. Nature 461, 104-108.
    • (2009) Nature , vol.461 , pp. 104-108
    • Wu, Y.I.1    Frey, D.2    Lungu, O.I.3    Jaehrig, A.4    Schlichting, I.5    Kuhlman, B.6    Hahn, K.M.7
  • 52
    • 84881045828 scopus 로고    scopus 로고
    • A lightinducible organelle-targeting system for dynamically activating and inactivating signaling in budding yeast
    • Yang, X., Jost, A.P., Weiner, O.D., and Tang, C. (2013). A lightinducible organelle-targeting system for dynamically activating and inactivating signaling in budding yeast. Mol. Biol. Cell 24, 2419-2430.
    • (2013) Mol. Biol. Cell , vol.24 , pp. 2419-2430
    • Yang, X.1    Jost, A.P.2    Weiner, O.D.3    Tang, C.4
  • 53
    • 70349967637 scopus 로고    scopus 로고
    • Induction of protein-protein interactions in live cells using light
    • Yazawa, M., Sadaghiani, A.M., Hsueh, B., and Dolmetsch, R.E. (2009). Induction of protein-protein interactions in live cells using light. Nat. Biotechnol. 27, 941-945.
    • (2009) Nat. Biotechnol. , vol.27 , pp. 941-945
    • Yazawa, M.1    Sadaghiani, A.M.2    Hsueh, B.3    Dolmetsch, R.E.4
  • 54
    • 79959514813 scopus 로고    scopus 로고
    • A synthetic optogenetic transcription device enhances bloodglucose homeostasis in mice
    • Ye, H., Daoud-El Baba, M., Peng, R.W., and Fussenegger, M. (2011a). A synthetic optogenetic transcription device enhances bloodglucose homeostasis in mice. Science 332, 1565-1568.
    • (2011) Science , vol.332 , pp. 1565-1568
    • Ye, H.1    Daoud-El Baba, M.2    Peng, R.W.3    Fussenegger, M.4
  • 55
    • 79959514813 scopus 로고    scopus 로고
    • A synthetic optogenetic transcription device enhances blood-glucose homeostasis in mice
    • Ye, H.F., Daoud-El Baba, M., Peng, R.W., and Fussenegger, M. (2011b). A synthetic optogenetic transcription device enhances blood-glucose homeostasis in mice. Science 332, 1565-1568.
    • (2011) Science , vol.332 , pp. 1565-1568
    • Ye, H.F.1    Daoud-El Baba, M.2    Peng, R.W.3    Fussenegger, M.4
  • 57
    • 84899716042 scopus 로고    scopus 로고
    • Light-mediated kinetic control reveals the temporal effect of the Raf/MEK/ERK pathway in PC12 cell neurite outgrowth
    • Zhang, K., Duan, L., Ong, Q., Lin, Z., Varman, P.M., Sung, K., and Cui, B. (2014). Light-mediated kinetic control reveals the temporal effect of the Raf/MEK/ERK pathway in PC12 cell neurite outgrowth. PLoS One 9, e92917.
    • (2014) PLoS One , vol.9
    • Zhang, K.1    Duan, L.2    Ong, Q.3    Lin, Z.4    Varman, P.M.5    Sung, K.6    Cui, B.7
  • 58
    • 84868556564 scopus 로고    scopus 로고
    • Optical control of protein activity by fluorescent protein domains
    • Zhou, X.X., Chung, H.K., Lam, A.J., and Lin, M.Z. (2012). Optical control of protein activity by fluorescent protein domains. Science 338, 810-814.
    • (2012) Science , vol.338 , pp. 810-814
    • Zhou, X.X.1    Chung, H.K.2    Lam, A.J.3    Lin, M.Z.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.