-
1
-
-
34250619055
-
Genomic analysis of protein- DNA interactions in bacteria: Insights into transcription and chromosome organization
-
Wade JT et al (2007) Genomic analysis of protein- DNA interactions in bacteria: insights into transcription and chromosome organization. Mol Microbiol 65(1):21–26
-
(2007)
Mol Microbiol
, vol.65
, Issue.1
, pp. 21-26
-
-
Wade, J.T.1
-
2
-
-
1042272180
-
Detecting protein- DNA interactions in vivo: Distribution of RNA polymerase on specifi c bacterial genes
-
Gilmour DS, Lis JT (1984) Detecting protein- DNA interactions in vivo: distribution of RNA polymerase on specifi c bacterial genes. Proc Natl Acad Sci U S A 81(14):4275–4279
-
(1984)
Proc Natl Acad Sci U S A
, vol.81
, Issue.14
, pp. 4275-4279
-
-
Gilmour, D.S.1
Lis, J.T.2
-
3
-
-
0021831222
-
In vivo interactions of RNA polymerase II with genes of Drosophila melanogaster
-
Gilmour DS, Lis JT (1985) In vivo interactions of RNA polymerase II with genes of Drosophila melanogaster. Mol Cell Biol 5(8):2009–2018
-
(1985)
Mol Cell Biol
, vol.5
, Issue.8
, pp. 2009-2018
-
-
Gilmour, D.S.1
Lis, J.T.2
-
4
-
-
0023948705
-
Mapping protein-DNA interactions in vivo with formaldehyde: Evidence that histone H4 is retained on a highly transcribed gene
-
Solomon MJ, Larsen PL, Varshavsky A (1988) Mapping protein-DNA interactions in vivo with formaldehyde: evidence that histone H4 is retained on a highly transcribed gene. Cell 53(6):937–947
-
(1988)
Cell
, vol.53
, Issue.6
, pp. 937-947
-
-
Solomon, M.J.1
Larsen, P.L.2
Varshavsky, A.3
-
5
-
-
0034161329
-
Mapping chromosomal proteins in vivo by formaldehyde-crosslinkedchromatin immunoprecipitation
-
Orlando V (2000) Mapping chromosomal proteins in vivo by formaldehyde-crosslinkedchromatin immunoprecipitation. Trends Bio chem Sci 25(3):99–104
-
(2000)
Trends Bio Chem Sci
, vol.25
, Issue.3
, pp. 99-104
-
-
Orlando, V.1
-
6
-
-
84990251443
-
A temporal threshold for formaldehyde crosslinking and fixation
-
Schmiedeberg L et al (2009) A temporal threshold for formaldehyde crosslinking and fi xation. PLoS One 4(2):e4636
-
(2009)
Plos One
, vol.4
, Issue.2
-
-
Schmiedeberg, L.1
-
7
-
-
34047198759
-
In vivo dual cross-linking for identifi cation of indirect DNA-associated proteins by chromatin immunoprecipitation
-
Zeng PY et al (2006) In vivo dual cross-linking for identifi cation of indirect DNA-associated proteins by chromatin immunoprecipitation. Biotechniques 41(6):694, 696, 698
-
(2006)
Biotechniques 41(6)
, vol.694
, Issue.696
, pp. 698
-
-
Zeng, P.Y.1
-
8
-
-
0024003456
-
A direct link between core histone acetylation and transcriptionally active chromatin
-
Hebbes TR, Thorne AW, Crane-Robinson C (1988) A direct link between core histone acetylation and transcriptionally active chromatin. EMBO J 7(5):1395–1402
-
(1988)
EMBO J
, vol.7
, Issue.5
, pp. 1395-1402
-
-
Hebbes, T.R.1
Thorne, A.W.2
Crane-Robinson, C.3
-
9
-
-
77953348282
-
Q&A: ChIPseq technologies and the study of gene regulation
-
Liu ET, Pott S, Huss M (2010) Q&A: ChIPseq technologies and the study of gene regulation. BMC Biol 8:56
-
(2010)
BMC Biol
, vol.8
, pp. 56
-
-
Liu, E.T.1
Pott, S.2
Huss, M.3
-
10
-
-
10744223820
-
Identifi cation of formaldehyde- induced modifi cations in proteins: Reactions with model peptides
-
Metz B et al (2004) Identifi cation of formaldehyde- induced modifi cations in proteins: reactions with model peptides. J Biol Chem 279(8):6235–6243
-
(2004)
J Biol Chem
, vol.279
, Issue.8
, pp. 6235-6243
-
-
Metz, B.1
-
11
-
-
1242351547
-
Analysis of regulatory networks in Pseudomonas aeruginosa by genomewide transcriptional profi ling
-
Goodman AL, Lory S (2004) Analysis of regulatory networks in Pseudomonas aeruginosa by genomewide transcriptional profi ling. Curr Opin Microbiol 7(1):39–44
-
(2004)
Curr Opin Microbiol
, vol.7
, Issue.1
, pp. 39-44
-
-
Goodman, A.L.1
Lory, S.2
-
12
-
-
0034704248
-
Genome-wide location and function of DNA binding proteins
-
Ren B et al (2000) Genome-wide location and function of DNA binding proteins. Science 290(5500):2306–2309
-
(2000)
Science
, vol.290
, Issue.5500
, pp. 2306-2309
-
-
Ren, B.1
-
13
-
-
34250159524
-
Genome-wide mapping of in vivo protein-DNA interactions
-
Johnson DS et al (2007) Genome-wide mapping of in vivo protein-DNA interactions. Science 316(5830):1497–1502
-
(2007)
Science
, vol.316
, Issue.5830
, pp. 1497-1502
-
-
Johnson, D.S.1
-
14
-
-
84869234288
-
Limitations and possibilities of low cell number ChIP-seq
-
Gilfi llan GD et al (2012) Limitations and possibilities of low cell number ChIP-seq. BMC Genomics 13:645
-
(2012)
BMC Genomics
, vol.13
, pp. 645
-
-
Gilfi Llan, G.D.1
-
15
-
-
84861730930
-
Single-tube linear DNA amplifi cation for genome-wide studies using a few thousand cells
-
Shankaranarayanan P et al (2012) Single-tube linear DNA amplifi cation for genome-wide studies using a few thousand cells. Nat Protoc 7(2):328–338
-
(2012)
Nat Protoc
, vol.7
, Issue.2
, pp. 328-338
-
-
Shankaranarayanan, P.1
-
16
-
-
33745549658
-
Epigenetic characterization of the early embryo with a chromatin immunoprecipitation protocol applicable to small cell populations
-
O'Neill LP, VerMilyea MD, Turner BM (2006) Epigenetic characterization of the early embryo with a chromatin immunoprecipitation protocol applicable to small cell populations. Nat Genet 38(7):835–841
-
(2006)
Nat Genet
, vol.38
, Issue.7
, pp. 835-841
-
-
O'neill, L.P.1
Vermilyea, M.D.2
Turner, B.M.3
-
17
-
-
33847661809
-
Protocol for the fast chromatin immunoprecipitation (ChIP) method
-
Nelson JD, Denisenko O, Bomsztyk K (2006) Protocol for the fast chromatin immunoprecipitation (ChIP) method. Nat Protoc 1(1): 179–185
-
(2006)
Nat Protoc
, vol.1
, Issue.1
, pp. 179-185
-
-
Nelson, J.D.1
Denisenko, O.2
Bomsztyk, K.3
-
18
-
-
44949138461
-
A rapid micro chromatin immunoprecipitation assay (MicroChIP)
-
Dahl JA, Collas P (2008) A rapid micro chromatin immunoprecipitation assay (microChIP). Nat Protoc 3(6):1032–1045
-
(2008)
Nat Protoc
, vol.3
, Issue.6
, pp. 1032-1045
-
-
Dahl, J.A.1
Collas, P.2
-
19
-
-
39449114225
-
Microplate-based chromatin immunoprecipitation method, Matrix ChIP: A platform to study signaling of complex genomic events
-
Flanagin S et al (2008) Microplate-based chromatin immunoprecipitation method, Matrix ChIP: a platform to study signaling of complex genomic events. Nucleic Acids Res 36(3):e17
-
(2008)
Nucleic Acids Res
, vol.36
, Issue.3
-
-
Flanagin, S.1
-
20
-
-
62749132272
-
Effi cient yeast ChIPSeq using multiplex short-read DNA sequencing
-
Lefrancois P et al (2009) Effi cient yeast ChIPSeq using multiplex short-read DNA sequencing. BMC Genomics 10:37
-
(2009)
BMC Genomics
, vol.10
, pp. 37
-
-
Lefrancois, P.1
-
21
-
-
77954169130
-
ChIP on Chip: Surprising results are often artifacts
-
Waldminghaus T, Skarstad K (2010) ChIP on Chip: surprising results are often artifacts. BMC Genomics 11:414
-
(2010)
BMC Genomics
, vol.11
, pp. 414
-
-
Waldminghaus, T.1
Skarstad, K.2
-
22
-
-
70349312354
-
ChIP-seq: Advantages and challenges of a maturing technology
-
Park PJ (2009) ChIP-seq: advantages and challenges of a maturing technology. Nat Rev Genet 10(10):669–680
-
(2009)
Nat Rev Genet
, vol.10
, Issue.10
, pp. 669-680
-
-
Park, P.J.1
-
23
-
-
0037812450
-
Development and validation of a T7 based linear amplifi cation for genomic DNA
-
Liu CL, Schreiber SL, Bernstein BE (2003) Development and validation of a T7 based linear amplifi cation for genomic DNA. BMC Genomics 4(1):19
-
(2003)
BMC Genomics
, vol.4
, Issue.1
, pp. 19
-
-
Liu, C.L.1
Schreiber, S.L.2
Bernstein, B.E.3
|