Convergent evolution of alternative developmental trajectories associated with diapause in African and South American killifish

Proceedings of the Royal Society B: Biological Sciences

Volumn 282, Issue 1802, 2015, Pages

  Furness, Andrew I ^a   Reznick, David N ^a   Springer, Mark S ^a   Meredith, Robert W ^b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b MONTCLAIR STATE UNIVERSITY   (United States)

Author keywords

Adaptation; Annual life cycle; Cyprinodontiformes

Indexed keywords

ADAPTATION; ANNUAL CYCLE; BIOLOGICAL DEVELOPMENT; CONVERGENT EVOLUTION; CYPRINID; DIAPAUSE; EGGSHELL; EMBRYO; ENVIRONMENTAL CUE; LIFE CYCLE; MORPHOLOGY;

CYPRINODONTIFORMES; CYPRINODONTOIDEI; VERTEBRATA;

ADAPTATION; ANATOMY AND HISTOLOGY; ANIMAL; CYPRINODONTIFORMES; EMBRYO DEVELOPMENT; EMBRYOLOGY; EVOLUTION; NONMAMMALIAN EMBRYO; PHYLOGENY; PHYSIOLOGY; SEASON;

ADAPTATION, PHYSIOLOGICAL; ANIMALS; BIOLOGICAL EVOLUTION; CYPRINODONTIFORMES; EMBRYO, NONMAMMALIAN; EMBRYONIC DEVELOPMENT; PHYLOGENY; SEASONS;

EID: 84921984160     PISSN: 09628452     EISSN: 14712954     Source Type: Journal    
DOI: 10.1098/rspb.2014.2189     Document Type: Article

References (52)

1. Duboule D. 1994 Temporal colinearity and the phylotypic progression: a basis for the stability of a vertebrate Bauplan and the evolution of morphologies through heterochrony. Development 1994, 135-142.
2. Kalinka AT, Tomancak P. 2012 The evolution of early animal embryos: conservation or divergence? Trends Ecol. Evol. 27, 385-393. (doi:10.1016/j.tree.2012.03.007)
3. Poe S, Wake MH. 2004 Quantitative tests of general models for the evolution of development. Am. Nat. 164, 415-422. (doi:10.1086/422658)
4. Raff RA. 1996 The shape of life: genes, development, and the evolution of animal form, p. 520. Chicago, IL: The University of Chicago Press.
5. Richardson MK. 1999 Vertebrate evolution: the developmental origins of adult variation. BioEssays 21, 604-613. (doi:10.1002/(SICI)1521-1878(199907)21:7,604::AID-BIES9.3.0.CO;2-U)
6. Richardson MK, Hanken J, Gooneratne ML, Pieau C, Raynaud A, Selwood L, Wright GM. 1997 There is no highly conserved embryonic stage in the vertebrates: implications for current theories of evolution and development. Anat. Embryol. 196, 91-106. (doi:10.1007/s004290050082)
7. Darwin C. 1859 On the origin of species by means of natural selection, p. 502. London, UK: John Murray.
8. Wiggins GB, Mackay RJ, Smith IM. 1980 Evolutionary and ecological strategies of animals in annual temporary pools. Arch. Hydrobiol. 58, 97-206.
9. Williams WD. 1985 Biotic adaptations in temporary lentic waters, with special reference to those in semi-arid and arid regions. Hydrobiologia 125, 85-110. (doi:10.1007/BF00045928)
10. Hrbek T, Larson A. 1999 The evolution of diapause in the killifish family Rivulidae (Atherinomorpha, Cyprinodontiformes): a molecular phylogenetic and biogeographic perspective. Evolution 53, 1200-1216. (doi:10.2307/2640823)
11. Karsten KB, Andriamandimbiarisoa LN, Fox SF, Raxworthy CJ. 2008 A unique life history among tetrapods: an annual chameleon living mostly as an egg. Proc. Natl Acad. Sci. USA 105, 8980-8984. (doi:10.1073/pnas.0802468105)
12. Murphy WJ, Collier GE. 1997 A molecular phylogeny for aplocheiloid fishes (Atherinomorpha, Cyprinodontiformes): the role of vicariance and the origins of annualism. Mol. Biol. Evol. 14, 790-799. (doi:10.1093/oxfordjournals.molbev.a025819)
13. Wourms JP. 1972 The developmental biology of annual fishes. III. Pre embryonic and embryonic diapause of variable duration in the eggs of annual fishes. J. Exp. Zool. 182, 389-414. (doi:10.1002/jez.1401820310)
14. Podrabsky JE, Tingaud-Sequeira A, Cerda J. 2010 Metabolic dormancy and responses to environmental desiccation in fish embryos. In Dormancy and resistance in harsh environments (eds E Lubzens, J Cerda, M Clark), pp. 203-226. Berlin, Germany: Springer.
15. Hahn DA, Denlinger DL. 2011 Energetics of insect diapause. Annu. Rev. Entomol. 56, 103-121. (doi:10.1146/annurev-ento-112408-085436)
16. Tauber MJ, Tauber CA, Masaki S. 1986 Seasonal adaptations of insects, p. 412. New York, NY: Oxford University Press.
17. Wourms JP. 1972 Developmental biology of annual fishes. I. Stages in the normal development of Austrofundulus myersi Dahl. J. Exp. Zool. 182, 143-167. (doi:10.1002/jez.1401820202)
18. Podrabsky JE, Garrett IDF, Kohl ZF. 2010 Alternative developmental pathways associated with diapause regulated by temperature and maternal influences in embryos of the annual killifish Austrofundulus limnaeus. J. Exp. Biol. 213, 3280-3288. (doi:10.1242/jeb.045906).
19. Kaplan RH, Cooper WS. 1984 The evolution of developmental plasticity in reproductive characteristics: an application of the 'adaptive coin-flipping’ principle. Am. Nat. 123, 393-410. (doi:10.1086/284211)
20. Moran NA. 1992 The evolutionary maintenance of alternative phenotypes. Am. Nat. 139, 971-989. (doi:10.1086/285369)
21. Wong TG, Ackerly DD. 2005 Optimal reproductive allocation in annuals and an informational constraint on plasticity. New Phytol. 166, 159-172. (doi:10.1111/j.1469-8137.2005.01375.x)
22. Murphy WJ, Nguyen TNP, Taylor EB, Collier GE. 1999 Mitochondrial DNA phylogeny of West African Aplocheiloid killifishes (Cyprinodontiformes, Aplocheilidae). Mol. Phylogenet. Evol. 11, 343-350. (doi:10.1006/mpev.1998.0567)
23. de Queiroz A, Gatesy J. 2007 The supermatrix approach to systematics. Trends Ecol. Evol. 22, 34-41. (doi:10.1016/j.tree.2006.10.002)
24. Kearse M et al. 2012 Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28, 1647-1649.
25. Edgar RC. 2004 Muscle: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32, 1792-1797. (doi:10.1093/nar/gkh340)
26. Rambaut A. 1996 Se-Al: Sequence Alignment Editor, version 2.0. University of Oxford, Department of Zoology.
27. Miller MA, Pfeiffer W, Schwartz T. 2010 Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In Proc. Gateway Computing Environments Workshop (GCE), pp. 1-8. New Orleans, LA: IEEE.
28. Maddison WP, Maddison DR. 2011 Mesquite: a modular system for evolutionary analysis. Version 2.75. See http://mesquiteproject.org.
29. Lewis PO. 2001 A likelihood approach to estimating phylogeny from discrete morphological character data. Syst. Biol. 50, 913-925. (doi:10.1080/106351501753462876)
30. Gamble T, Greenbaum E, Jackman TR, Russell AP, Bauer AM. 2012 Repeated origin and loss of adhesive toepads in geckos. PLoS ONE 7, e39429. (doi:10.1371/journal.pone.0039429)
31. Maddison WP, Midford PE, Otto SP. 2007 Estimating a binary character’s effect on speciation and extinction. Syst. Biol. 56, 701-710. (doi:10.1080/10635150701607033)
32. FitzJohn RG. 2012 Diversitree: comparative phylogenetic analyses of diversification in R. Methods Ecol. Evol. 3, 1084-1092. (doi:10.1111/j.2041-210X.2012.00234.x)
33. Bollback JP. 2006 Simmap: stochastic character mapping of discrete traits on phylogenies. BMC Bioinform. 7, 88. (doi:10.1186/1471-2105-7-88)
34. Huelsenbeck JP, Nielsen R, Bollback JP. 2003 Stochastic mapping of morphological characters. Syst. Biol. 52, 131-158. (doi:10.1080/10635150390192780)
35. Nielsen R. 2002 Mapping mutations on phylogenies. Syst. Biol. 51, 729-739. (doi:10.1080/10635150290102393)
36. Rembold M, Lahiri K, Foulkes NS, Wittbrodt J. 2006 Transgenesis in fish: efficient selection of transgenic fish by co-injection with a fluorescent reporter construct. Nat. Protocols 1, 1133-1139.
37. Schneider CA, Rasband WS, Eliceiri KW. 2012 NIH Image to ImageJ: 25 years of image analysis. Nat. Methods 9, 671-675. (doi:10.1038/nmeth.2089)
38. R Core Team. 2013 R: a language and environment for statistical computing. See http://www.R-project.org.
39. Pinheiro J, Bates D, DebRoy S, Sarkar D, R Core Team 2015 nlme: linear and nonlinear mixed effects models. R package, version 3.1-119. See http:// cran.r-project.org/package=nime.
40. Bolker BM, Brooks ME, Clark CJ, Geange SW, Poulsen JR, Stevens MHH, White J-SS. 2009 Generalized linear mixed models: a practical guide for ecology and evolution. Trends Ecol. Evol. 24, 127-135. (doi:10.1016/j.tree.2008.10.008)
41. Schluter D, Nagel LM. 1995 Parallel speciation by natural selection. Am. Nat. 146, 292-301. (doi:10.1086/285799)
42. Fishman AP, Pack AI, Delaney RG, Galante RJ. 1986 Estivation in Protopterus. J. Morphol. 190, 237-248. (doi:10.1002/jmor.1051900416)
43. Elia M. 1992 Organ and tissue contribution to metabolic rate. In Energy metabolism: tissue determinants and cellular corollaries (eds JM Kinney, HN Tucker), pp. 61-79. New York, NY: Raven Press.
44. Moczek AP, Sultan S, Foster S, Ledon-Rettig C, Dworkin I, Nijhout HF, Abouheif E, Pfennig DW. 2011 The role of developmental plasticity in evolutionary innovation. Proc. R. Soc. B 278, 2705-2713. (doi:10.1098/rspb.2011.0971)
45. Ferrari MCO, Wisenden BD, Chivers DP. 2010 Chemical ecology of predator-prey interactions in aquatic ecosystems: a review and prospectus. Can. J. Zool. 88, 698-724. (doi:10.1139/Z10-029)
46. Tollrian R, Harvell CD. 1999 The ecology and evolution of inducible defenses, p. 395. Princeton, NJ: Princeton University Press.
47. Mathis A, Ferrari MCO, Windel N, Messier F, Chivers DP. 2008 Learning by embryos and the ghost of predation future. Proc. R. Soc. B 275, 2603-2607. (doi:10.1098/rspb.2008.0754)
48. Laforsch C, Tollrian R. 2004 Inducible defenses in multipredator environments: cyclomorphosis in Daphnia cucullata. Ecology 85, 2302-2311. (doi:10.1890/03-0286)
49. Rabus M, Laforsch C. 2011 Growing large and bulky in the presence of the enemy: Daphnia magna gradually switches the mode of inducible morphological defences. Funct. Ecol. 25, 1137-1143. (doi:10.1111/j.1365-2435.2011.01840.x)
50. Bateson P et al. 2004 Developmental plasticity and human health. Nature 430, 419-421. (doi:10.1038/nature02725)
51. Pechenik JA. 2006 Larval experience and latent effects: metamorphosis is not a new beginning. Integr. Comp. Biol. 46, 323-333. (doi:10.1093/icb/icj028)
52. Polacik M, Blazek R, Rezucha R, Vrtilek M, Reichard M. 2014 Alternative intrapopulation life-history strategies and their trade-offs in an African annual fish. J. Evol. Biol. 27, 854-865. (doi:10.1111/jeb.12359)