Mitochondrial DNA Phylogeny of West African Aplocheiloid Killifishes (Cyprinodontiformes, Aplocheilidae)

Molecular Phylogenetics and Evolution

Volumn 11, Issue 3, 1999, Pages 343-350

  Murphy, William J ^a   Nguyen, Thuan N P ^b   Taylor, Eric B ^b   Collier, Glen E ^a  

^a UNIVERSITY OF TULSA   (United States)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

APLOCHEILIDAE; ARCHIAPHYOSEMION; CYPRINODONTIDAE; CYPRINODONTIFORMES;

CYTOCHROME B; MITOCHONDRIAL DNA; RIBOSOME RNA; RNA, RIBOSOMAL, 12S;

AFRICA; ANIMAL; ARTICLE; CHEMISTRY; CYPRINODONTIFORMES; GENETICS; MOLECULAR GENETICS; PHYLOGENY;

AFRICA; ANIMALS; CYPRINODONTIFORMES; CYTOCHROME B GROUP; DNA, MITOCHONDRIAL; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL;

EID: 0033110832     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1006/mpev.1998.0567     Document Type: Article

References (39)

1. Bremer K. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution. 42:1988;795-803.
2. Clausen H. S. Definition of a new cyprinodontid genus and description of a "new" but well-known West African cyprinodont, with clarification of the term "sjoestedtiAphyosemion sjoestedtiAphyosemion coeruleum. Rev. Zool. Bot. Africa. 74:1966;331-341.
3. Clausen H. S. Tropical Old World Cyprinodonts. Reflections on the Taxonomy of Tropical Old World Cyprinodonts, with Remarks on their Biology and Distribution. 1967;KobenhavnAkademisk Forlag, Copenhagen.
4. Costa W. J. E. M. Análise filogenética da família Rivulidae (Cyprinodontiformes, Aplocheiloidei). Rev. Brasil. Biol. 50:1990;65-82.
5. Farris J. S. The retention index and the rescaled consistency index. Cladistics. 5:1969;417-419.
6. Huber J. H. Liste nominal annotée deAphyosemionRaddaellaKathetys. Suppl. Killi Rev. France. 4:1977;1-14.
7. Huber J. H., Seegers L. Vorlaufige Beschreibung vonDiapteron, D. K. G. J. 9:1977;146-148.
8. Irwin D. M., Kocher T. D., Wilson A. C. Evolution of the cytochromeb. J. Mol. Evol. 32:1991;128-144.
9. Jukes T. H., Cantor C. R. Evolution of protein molecules. Mammalian Protein Metabolism. 1969;Academic Press, New York. p. 21-132.
10. Kimura M. A simple method for estimating evolutionary rates of substitution through comparative studies of nucleotide sequences. J. Mol. Evol. 29:1980;170-179.
11. Klotz T., Peterson C. Roloffia. J. Am. Killifish Assoc. 27:1994;177-184.
12. Kluge A. G., Farris S. G. Quantitative phyletics and the evolution of anurans. Syst. Zool. 18:1969;1-32.
13. Kocher T. D., Thomas W. K., Meyer A., Edwards S. V., Pääbo S., Villablanca F. X., Wilson A. C. Dynamics of mitochondrial DNA evolution in animals: Amplification and sequencing with conserved primers. Proc. Natl. Acad. Sci. USA. 86:1989;6196-6200.
14. Kottelat N. Modifications taxonomiques au sein des super-espècesAphyosemion gardneriA. walkeriAphyosemionFundulopanchaxwalkeri. Aquarama. 22:1976;157-166.
15. Kumar, S. Tamura, K. Nei, M. 1993, MEGA: Molecular Evolutionary Genetics Analysis, Institute of Molecular Evolutionary Genetics, Pennsylvania State University.
16. Meyer A., Kocher T. D., Basasibwaki P., Wilson A. C. Monophyletic origin of Lake Victorian cichlid fishes suggested by mitochondrial DNA sequences. Nature. 347:1990;550-553.
17. Mishler, B. D. Donoghue, M. J. Albert, V. A. 1991, The decay index as a measure of relative robustness within a cladogram (abstract), Willi Hennig Society Meeting, Toronto, Ontario.
18. Murphy W. J., Collier G. E. Phylogenetic relationships within the aplocheiloid fish genusRivulus. Mol. Biol. Evol. 13:1996;642-649.
19. Murphy W. J., Collier G. E. A molecular phylogeny for aplocheiloid fishes (Atherinomorpha, Cyprinodontiformes): The role of vicariance and the origins of annualism. Mol. Biol. Evol. 14:1997;790-799.
20. Murphy W. J., Collier G. E. Phylogenetic relationships of African killifish in the generaAphyosemionFundulopanchax. Mol. Phy. Evol. 11:1999;351-360.
21. Myers G. S. A new poeciliid fish from the Congo with remarks on Funduline genera. Am. Mus. Novit. 116:1924;1-9.
22. Myers G. S. The classification of the African cyprinodont fishes with a discussion of the geographical distribution of the Cyprinodontidae of the world (Abstr.). Stanford Univ. Bull. 8:1933;10-12.
23. Myers G. S. Annual fishes. Aquar. J. 23:1952;125-141.
24. Olsen G. J., Matsuda H., Hagstrom R., Overbeek R. fastDNAml: A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood. Comput. Appl. Biosci. 10:1994;41-48.
25. Parenti L. R. A phylogenetic analysis of Cyprinodontiform fishes (Teleostei; Atherinomorpha). Bull. Am. Mus. Nat. Hist. 168:1981;335-557.
26. Radda A. C. Die Cyprinodontiden-Fauna von Sierra Leone. Aquaria. 23:1976;137-149.
27. Radda A. C. Vorlaufige Beschreibung von vier neuen Subgenera der GattungAphyosemion. Aquaria. 16:1977;209-216.
28. Radda A. C., Pürzl E. Colour Atlas of the Cyprinodonts of the Rain Forest of Tropical Africa. 1987;Verlag Otto Hoffmann, Vienna.
29. Romand R. Similarité génétique entre deux espèces d'Aphyosemion. Rev. Zool. Afr. 99:1985;177-183.
30. Romand R. A study ofAphyosemion schmittiAphyosemion. Zool. J. Linn. Soc. 87:1986;215-234.
31. Rzhetsky A., Nei M. A simple method for estimating and testing minimum evolution trees. \E Mol. Biol. Evol. 9:1992;945-967.
32. Saitou N., Nei M. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:1987;406-425.
33. Scheel J. J. Atlas of Killifishes of the Old World. 1990;T. F. H. Publ. Neptune City.
34. Swofford, D. L. 1993, PAUP-Phylogenetic analysis using parsimony, Illinois Natural History Survey, Champaign.
35. Tamura K. Estimation of the number of nucleotide substitutions when there are strong transition-transversion and G + C content biases. Mol. Biol. Evol. 9:1992;678-687.
36. Thompson J. D., Higgins D. G., Gibson T. J. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acid Res. 22:1994;4673-4680.
37. Wourms J. P. Developmental biology of annual fishes. I. Stages in the normal development ofAustrofundulus myersi. J. Exp. Zool. 182:1972a;143-168.
38. Wourms J. P. Developmental biology of annual fishes. II. Naturally occurring dispersion-reaggregation of blastomeres during development of annual fish eggs. J. Exp. Zool. 182:1972b;169-200.
39. Wourms J. P. Developmental biology of annual fishes. III. Pre-embryonic and embryonic diapause of variable duration in the eggs of annual fishes. J. Exp. Zool. 182:1972c;389-414.