-
1
-
-
80052239700
-
Specific inhibition of NF-Y subunits triggers different cell proliferation defects
-
Benatti P., Dolfini D., Viganò A., Ravo M., Weisz A., Imbriano C. Specific inhibition of NF-Y subunits triggers different cell proliferation defects. Nucleic Acids Res. 2011, 39:5356-5368.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 5356-5368
-
-
Benatti, P.1
Dolfini, D.2
Viganò, A.3
Ravo, M.4
Weisz, A.5
Imbriano, C.6
-
2
-
-
0346365375
-
The B subunit of the CCAAT box binding transcription factor complex (CBF/NF-Y) is essential for early mouse development and cell proliferation
-
Bhattacharya A., Deng J.M., Zhang Z., Behringer R., de Crombrugghe B., Maity S.N. The B subunit of the CCAAT box binding transcription factor complex (CBF/NF-Y) is essential for early mouse development and cell proliferation. Cancer Res. 2003, 63:8167-8172.
-
(2003)
Cancer Res.
, vol.63
, pp. 8167-8172
-
-
Bhattacharya, A.1
Deng, J.M.2
Zhang, Z.3
Behringer, R.4
de Crombrugghe, B.5
Maity, S.N.6
-
3
-
-
84856877564
-
NF-Y is necessary for hematopoietic stem cell proliferation and survival
-
Bungartz G., Land H., Scadden D.T., Emerson S.G. NF-Y is necessary for hematopoietic stem cell proliferation and survival. Blood 2012, 119:1380-1389.
-
(2012)
Blood
, vol.119
, pp. 1380-1389
-
-
Bungartz, G.1
Land, H.2
Scadden, D.T.3
Emerson, S.G.4
-
4
-
-
0020575746
-
Temporal order of chromatin structural changes associated with activation of the major chicken vitellogenin gene
-
Burch J.B., Weintraub H. Temporal order of chromatin structural changes associated with activation of the major chicken vitellogenin gene. Cell 1983, 33:65-76.
-
(1983)
Cell
, vol.33
, pp. 65-76
-
-
Burch, J.B.1
Weintraub, H.2
-
5
-
-
44649117905
-
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
-
Chen X., Xu H., Yuan P., Fang F., Huss M., Vega V.B., Wong E., Orlov Y.L., Zhang W., Jiang J., et al. Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 2008, 133:1106-1117.
-
(2008)
Cell
, vol.133
, pp. 1106-1117
-
-
Chen, X.1
Xu, H.2
Yuan, P.3
Fang, F.4
Huss, M.5
Vega, V.B.6
Wong, E.7
Orlov, Y.L.8
Zhang, W.9
Jiang, J.10
-
6
-
-
84896338378
-
Single-molecule dynamics of enhanceosome assembly in embryonic stem cells
-
Chen J., Zhang Z., Li L., Chen B.C., Revyakin A., Hajj B., Legant W., Dahan M., Lionnet T., Betzig E., et al. Single-molecule dynamics of enhanceosome assembly in embryonic stem cells. Cell 2014, 156:1274-1285.
-
(2014)
Cell
, vol.156
, pp. 1274-1285
-
-
Chen, J.1
Zhang, Z.2
Li, L.3
Chen, B.C.4
Revyakin, A.5
Hajj, B.6
Legant, W.7
Dahan, M.8
Lionnet, T.9
Betzig, E.10
-
7
-
-
78149465975
-
A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity
-
Chia N.Y., Chan Y.S., Feng B., Lu X., Orlov Y.L., Moreau D., Kumar P., Yang L., Jiang J., Lau M.S., et al. A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity. Nature 2010, 468:316-320.
-
(2010)
Nature
, vol.468
, pp. 316-320
-
-
Chia, N.Y.1
Chan, Y.S.2
Feng, B.3
Lu, X.4
Orlov, Y.L.5
Moreau, D.6
Kumar, P.7
Yang, L.8
Jiang, J.9
Lau, M.S.10
-
8
-
-
84899082334
-
Integrative framework for identification of key cell identity genes uncovers determinants of ES cell identity and homeostasis
-
Cinghu S., Yellaboina S., Freudenberg J.M., Ghosh S., Zheng X., Oldfield A.J., Lackford B.L., Zaykin D.V., Hu G., Jothi R. Integrative framework for identification of key cell identity genes uncovers determinants of ES cell identity and homeostasis. Proc. Natl. Acad. Sci. USA 2014, 111:E1581-E1590.
-
(2014)
Proc. Natl. Acad. Sci. USA
, vol.111
, pp. E1581-E1590
-
-
Cinghu, S.1
Yellaboina, S.2
Freudenberg, J.M.3
Ghosh, S.4
Zheng, X.5
Oldfield, A.J.6
Lackford, B.L.7
Zaykin, D.V.8
Hu, G.9
Jothi, R.10
-
9
-
-
0035798572
-
CBF/NF-Y functions both in nucleosomal disruption and transcription activation of the chromatin-assembled topoisomerase IIalpha promoter. Transcription activation by CBF/NF-Y in chromatin is dependent on the promoter structure
-
Coustry F., Hu Q., de Crombrugghe B., Maity S.N. CBF/NF-Y functions both in nucleosomal disruption and transcription activation of the chromatin-assembled topoisomerase IIalpha promoter. Transcription activation by CBF/NF-Y in chromatin is dependent on the promoter structure. J. Biol. Chem. 2001, 276:40621-40630.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 40621-40630
-
-
Coustry, F.1
Hu, Q.2
de Crombrugghe, B.3
Maity, S.N.4
-
10
-
-
78650758676
-
Histone H3K27ac separates active from poised enhancers and predicts developmental state
-
Creyghton M.P., Cheng A.W., Welstead G.G., Kooistra T., Carey B.W., Steine E.J., Hanna J., Lodato M.A., Frampton G.M., Sharp P.A., et al. Histone H3K27ac separates active from poised enhancers and predicts developmental state. Proc. Natl. Acad. Sci. USA 2010, 107:21931-21936.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 21931-21936
-
-
Creyghton, M.P.1
Cheng, A.W.2
Welstead, G.G.3
Kooistra, T.4
Carey, B.W.5
Steine, E.J.6
Hanna, J.7
Lodato, M.A.8
Frampton, G.M.9
Sharp, P.A.10
-
12
-
-
84867912887
-
The short isoform of NF-YA belongs to the embryonic stem cell transcription factor circuitry
-
Dolfini D., Minuzzo M., Pavesi G., Mantovani R. The short isoform of NF-YA belongs to the embryonic stem cell transcription factor circuitry. Stem Cells 2012, 30:2450-2459.
-
(2012)
Stem Cells
, vol.30
, pp. 2450-2459
-
-
Dolfini, D.1
Minuzzo, M.2
Pavesi, G.3
Mantovani, R.4
-
13
-
-
84857707318
-
ChromHMM: automating chromatin-state discovery and characterization
-
Ernst J., Kellis M. ChromHMM: automating chromatin-state discovery and characterization. Nat. Methods 2012, 9:215-216.
-
(2012)
Nat. Methods
, vol.9
, pp. 215-216
-
-
Ernst, J.1
Kellis, M.2
-
14
-
-
0033529095
-
Down-regulation of cyclin B1 gene transcription in terminally differentiated skeletal muscle cells is associated with loss of functional CCAAT-binding NF-Y complex
-
Farina A., Manni I., Fontemaggi G., Tiainen M., Cenciarelli C., Bellorini M., Mantovani R., Sacchi A., Piaggio G. Down-regulation of cyclin B1 gene transcription in terminally differentiated skeletal muscle cells is associated with loss of functional CCAAT-binding NF-Y complex. Oncogene 1999, 18:2818-2827.
-
(1999)
Oncogene
, vol.18
, pp. 2818-2827
-
-
Farina, A.1
Manni, I.2
Fontemaggi, G.3
Tiainen, M.4
Cenciarelli, C.5
Bellorini, M.6
Mantovani, R.7
Sacchi, A.8
Piaggio, G.9
-
15
-
-
84881168849
-
NF-Y coassociates with FOS at promoters, enhancers, repetitive elements, and inactive chromatin regions, and is stereo-positioned with growth-controlling transcription factors
-
Fleming J.D., Pavesi G., Benatti P., Imbriano C., Mantovani R., Struhl K. NF-Y coassociates with FOS at promoters, enhancers, repetitive elements, and inactive chromatin regions, and is stereo-positioned with growth-controlling transcription factors. Genome Res. 2013, 23:1195-1209.
-
(2013)
Genome Res.
, vol.23
, pp. 1195-1209
-
-
Fleming, J.D.1
Pavesi, G.2
Benatti, P.3
Imbriano, C.4
Mantovani, R.5
Struhl, K.6
-
16
-
-
84860378636
-
Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity
-
Freudenberg J.M., Ghosh S., Lackford B.L., Yellaboina S., Zheng X., Li R., Cuddapah S., Wade P.A., Hu G., Jothi R. Acute depletion of Tet1-dependent 5-hydroxymethylcytosine levels impairs LIF/Stat3 signaling and results in loss of embryonic stem cell identity. Nucleic Acids Res. 2012, 40:3364-3377.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 3364-3377
-
-
Freudenberg, J.M.1
Ghosh, S.2
Lackford, B.L.3
Yellaboina, S.4
Zheng, X.5
Li, R.6
Cuddapah, S.7
Wade, P.A.8
Hu, G.9
Jothi, R.10
-
17
-
-
84860376812
-
Identification of CTCF as a master regulator of the clustered protocadherin genes
-
Golan-Mashiach M., Grunspan M., Emmanuel R., Gibbs-Bar L., Dikstein R., Shapiro E. Identification of CTCF as a master regulator of the clustered protocadherin genes. Nucleic Acids Res. 2012, 40:3378-3391.
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 3378-3391
-
-
Golan-Mashiach, M.1
Grunspan, M.2
Emmanuel, R.3
Gibbs-Bar, L.4
Dikstein, R.5
Shapiro, E.6
-
18
-
-
34548411011
-
Systematic identification of cis-regulatory sequences active in mouse and human embryonic stem cells
-
Grskovic M., Chaivorapol C., Gaspar-Maia A., Li H., Ramalho-Santos M. Systematic identification of cis-regulatory sequences active in mouse and human embryonic stem cells. PLoS Genet. 2007, 3:e145.
-
(2007)
PLoS Genet.
, vol.3
, pp. e145
-
-
Grskovic, M.1
Chaivorapol, C.2
Gaspar-Maia, A.3
Li, H.4
Ramalho-Santos, M.5
-
19
-
-
84865724573
-
CTCF is required for neural development and stochastic expression of clustered Pcdh genes in neurons
-
Hirayama T., Tarusawa E., Yoshimura Y., Galjart N., Yagi T. CTCF is required for neural development and stochastic expression of clustered Pcdh genes in neurons. Cell Rep. 2012, 2:345-357.
-
(2012)
Cell Rep.
, vol.2
, pp. 345-357
-
-
Hirayama, T.1
Tarusawa, E.2
Yoshimura, Y.3
Galjart, N.4
Yagi, T.5
-
20
-
-
79961002967
-
EsBAF facilitates pluripotency by conditioning the genome for LIF/STAT3 signalling and by regulating polycomb function
-
Ho L., Miller E.L., Ronan J.L., Ho W.Q., Jothi R., Crabtree G.R. esBAF facilitates pluripotency by conditioning the genome for LIF/STAT3 signalling and by regulating polycomb function. Nat. Cell Biol. 2011, 13:903-913.
-
(2011)
Nat. Cell Biol.
, vol.13
, pp. 903-913
-
-
Ho, L.1
Miller, E.L.2
Ronan, J.L.3
Ho, W.Q.4
Jothi, R.5
Crabtree, G.R.6
-
21
-
-
0034635487
-
Stable expression of a dominant negative mutant of CCAAT binding factor/NF-Y in mouse fibroblast cells resulting in retardation of cell growth and inhibition of transcription of various cellular genes
-
Hu Q., Maity S.N. Stable expression of a dominant negative mutant of CCAAT binding factor/NF-Y in mouse fibroblast cells resulting in retardation of cell growth and inhibition of transcription of various cellular genes. J. Biol. Chem. 2000, 275:4435-4444.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 4435-4444
-
-
Hu, Q.1
Maity, S.N.2
-
22
-
-
52649132425
-
Genome-wide identification of invivo protein-DNA binding sites from ChIP-Seq data
-
Jothi R., Cuddapah S., Barski A., Cui K., Zhao K. Genome-wide identification of invivo protein-DNA binding sites from ChIP-Seq data. Nucleic Acids Res. 2008, 36:5221-5231.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 5221-5231
-
-
Jothi, R.1
Cuddapah, S.2
Barski, A.3
Cui, K.4
Zhao, K.5
-
23
-
-
11144335986
-
NF-Y is essential for the recruitment of RNA polymerase II and inducible transcription of several CCAAT box-containing genes
-
Kabe Y., Yamada J., Uga H., Yamaguchi Y., Wada T., Handa H. NF-Y is essential for the recruitment of RNA polymerase II and inducible transcription of several CCAAT box-containing genes. Mol. Cell. Biol. 2005, 25:512-522.
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 512-522
-
-
Kabe, Y.1
Yamada, J.2
Uga, H.3
Yamaguchi, Y.4
Wada, T.5
Handa, H.6
-
24
-
-
77957139539
-
Mediator and cohesin connect gene expression and chromatin architecture
-
Kagey M.H., Newman J.J., Bilodeau S., Zhan Y., Orlando D.A., van Berkum N.L., Ebmeier C.C., Goossens J., Rahl P.B., Levine S.S., et al. Mediator and cohesin connect gene expression and chromatin architecture. Nature 2010, 467:430-435.
-
(2010)
Nature
, vol.467
, pp. 430-435
-
-
Kagey, M.H.1
Newman, J.J.2
Bilodeau, S.3
Zhan, Y.4
Orlando, D.A.5
van Berkum, N.L.6
Ebmeier, C.C.7
Goossens, J.8
Rahl, P.B.9
Levine, S.S.10
-
25
-
-
77957757417
-
A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs
-
Kim J., Woo A.J., Chu J., Snow J.W., Fujiwara Y., Kim C.G., Cantor A.B., Orkin S.H. A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs. Cell 2010, 143:313-324.
-
(2010)
Cell
, vol.143
, pp. 313-324
-
-
Kim, J.1
Woo, A.J.2
Chu, J.3
Snow, J.W.4
Fujiwara, Y.5
Kim, C.G.6
Cantor, A.B.7
Orkin, S.H.8
-
26
-
-
77952367798
-
Widespread transcription at neuronal activity-regulated enhancers
-
Kim T.K., Hemberg M., Gray J.M., Costa A.M., Bear D.M., Wu J., Harmin D.A., Laptewicz M., Barbara-Haley K., Kuersten S., et al. Widespread transcription at neuronal activity-regulated enhancers. Nature 2010, 465:182-187.
-
(2010)
Nature
, vol.465
, pp. 182-187
-
-
Kim, T.K.1
Hemberg, M.2
Gray, J.M.3
Costa, A.M.4
Bear, D.M.5
Wu, J.6
Harmin, D.A.7
Laptewicz, M.8
Barbara-Haley, K.9
Kuersten, S.10
-
27
-
-
0842267182
-
The histone-fold protein complex CHRAC-15/17 enhances nucleosome sliding and assembly mediated by ACF
-
Kukimoto I., Elderkin S., Grimaldi M., Oelgeschläger T., Varga-Weisz P.D. The histone-fold protein complex CHRAC-15/17 enhances nucleosome sliding and assembly mediated by ACF. Mol. Cell 2004, 13:265-277.
-
(2004)
Mol. Cell
, vol.13
, pp. 265-277
-
-
Kukimoto, I.1
Elderkin, S.2
Grimaldi, M.3
Oelgeschläger, T.4
Varga-Weisz, P.D.5
-
28
-
-
34547115028
-
A dominant-negative form of mouse SOX2 induces trophectoderm differentiation and progressive polyploidy in mouse embryonic stem cells
-
Li J., Pan G., Cui K., Liu Y., Xu S., Pei D. A dominant-negative form of mouse SOX2 induces trophectoderm differentiation and progressive polyploidy in mouse embryonic stem cells. J. Biol. Chem. 2007, 282:19481-19492.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 19481-19492
-
-
Li, J.1
Pan, G.2
Cui, K.3
Liu, Y.4
Xu, S.5
Pei, D.6
-
29
-
-
84859753133
-
Inactivation of CBF/NF-Y in postnatal liver causes hepatocellular degeneration, lipid deposition, and endoplasmic reticulum stress
-
Luo R., Klumpp S.A., Finegold M.J., Maity S.N. Inactivation of CBF/NF-Y in postnatal liver causes hepatocellular degeneration, lipid deposition, and endoplasmic reticulum stress. Sci. Rep. 2011, 1:136.
-
(2011)
Sci. Rep.
, vol.1
, pp. 136
-
-
Luo, R.1
Klumpp, S.A.2
Finegold, M.J.3
Maity, S.N.4
-
30
-
-
79551624666
-
Sequence-specific regulator Prdm14 safeguards mouse ESCs from entering extraembryonic endoderm fates
-
Ma Z., Swigut T., Valouev A., Rada-Iglesias A., Wysocka J. Sequence-specific regulator Prdm14 safeguards mouse ESCs from entering extraembryonic endoderm fates. Nat. Struct. Mol. Biol. 2011, 18:120-127.
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 120-127
-
-
Ma, Z.1
Swigut, T.2
Valouev, A.3
Rada-Iglesias, A.4
Wysocka, J.5
-
31
-
-
0032078929
-
Role of the CCAAT-binding protein CBF/NF-Y in transcription
-
Maity S.N., de Crombrugghe B. Role of the CCAAT-binding protein CBF/NF-Y in transcription. Trends Biochem. Sci. 1998, 23:174-178.
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 174-178
-
-
Maity, S.N.1
de Crombrugghe, B.2
-
32
-
-
48449084118
-
Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells
-
Marson A., Levine S.S., Cole M.F., Frampton G.M., Brambrink T., Johnstone S., Guenther M.G., Johnston W.K., Wernig M., Newman J., et al. Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells. Cell 2008, 134:521-533.
-
(2008)
Cell
, vol.134
, pp. 521-533
-
-
Marson, A.1
Levine, S.S.2
Cole, M.F.3
Frampton, G.M.4
Brambrink, T.5
Johnstone, S.6
Guenther, M.G.7
Johnston, W.K.8
Wernig, M.9
Newman, J.10
-
33
-
-
84872539860
-
Sequence-specific transcription factor NF-Y displays histone-like DNA binding and H2B-like ubiquitination
-
Nardini M., Gnesutta N., Donati G., Gatta R., Forni C., Fossati A., Vonrhein C., Moras D., Romier C., Bolognesi M., Mantovani R. Sequence-specific transcription factor NF-Y displays histone-like DNA binding and H2B-like ubiquitination. Cell 2013, 152:132-143.
-
(2013)
Cell
, vol.152
, pp. 132-143
-
-
Nardini, M.1
Gnesutta, N.2
Donati, G.3
Gatta, R.4
Forni, C.5
Fossati, A.6
Vonrhein, C.7
Moras, D.8
Romier, C.9
Bolognesi, M.10
Mantovani, R.11
-
34
-
-
84555190005
-
ChIP-Seq data analysis: identification of protein-DNA binding sites with SISSRs peak-finder
-
Narlikar L., Jothi R. ChIP-Seq data analysis: identification of protein-DNA binding sites with SISSRs peak-finder. Methods Mol. Biol. 2012, 802:305-322.
-
(2012)
Methods Mol. Biol.
, vol.802
, pp. 305-322
-
-
Narlikar, L.1
Jothi, R.2
-
35
-
-
0032582513
-
Formation of pluripotent stem cells in the mammalian embryo depends on the POU transcription factor Oct4
-
Nichols J., Zevnik B., Anastassiadis K., Niwa H., Klewe-Nebenius D., Chambers I., Schöler H., Smith A. Formation of pluripotent stem cells in the mammalian embryo depends on the POU transcription factor Oct4. Cell 1998, 95:379-391.
-
(1998)
Cell
, vol.95
, pp. 379-391
-
-
Nichols, J.1
Zevnik, B.2
Anastassiadis, K.3
Niwa, H.4
Klewe-Nebenius, D.5
Chambers, I.6
Schöler, H.7
Smith, A.8
-
36
-
-
70349325798
-
Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors
-
Nishiyama A., Xin L., Sharov A.A., Thomas M., Mowrer G., Meyers E., Piao Y., Mehta S., Yee S., Nakatake Y., et al. Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors. Cell Stem Cell 2009, 5:420-433.
-
(2009)
Cell Stem Cell
, vol.5
, pp. 420-433
-
-
Nishiyama, A.1
Xin, L.2
Sharov, A.A.3
Thomas, M.4
Mowrer, G.5
Meyers, E.6
Piao, Y.7
Mehta, S.8
Yee, S.9
Nakatake, Y.10
-
37
-
-
84867894231
-
Master regulators or lineage-specifying? Changing views on CD4+ Tcell transcription factors
-
Oestreich K.J., Weinmann A.S. Master regulators or lineage-specifying? Changing views on CD4+ Tcell transcription factors. Nat. Rev. Immunol. 2012, 12:799-804.
-
(2012)
Nat. Rev. Immunol.
, vol.12
, pp. 799-804
-
-
Oestreich, K.J.1
Weinmann, A.S.2
-
38
-
-
84875609093
-
A central role for TFIID in the pluripotent transcription circuitry
-
Pijnappel W.W., Esch D., Baltissen M.P., Wu G., Mischerikow N., Bergsma A.J., van der Wal E., Han D.W., Bruch Hv., Moritz S., et al. A central role for TFIID in the pluripotent transcription circuitry. Nature 2013, 495:516-519.
-
(2013)
Nature
, vol.495
, pp. 516-519
-
-
Pijnappel, W.W.1
Esch, D.2
Baltissen, M.P.3
Wu, G.4
Mischerikow, N.5
Bergsma, A.J.6
van der Wal, E.7
Han, D.W.8
Bruch, H.9
Moritz, S.10
-
39
-
-
0037428397
-
The NF-YB/NF-YC structure gives insight into DNA binding and transcription regulation by CCAAT factor NF-Y
-
Romier C., Cocchiarella F., Mantovani R., Moras D. The NF-YB/NF-YC structure gives insight into DNA binding and transcription regulation by CCAAT factor NF-Y. J. Biol. Chem. 2003, 278:1336-1345.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 1336-1345
-
-
Romier, C.1
Cocchiarella, F.2
Mantovani, R.3
Moras, D.4
-
40
-
-
0028920041
-
Recombinant rat CBF-C, the third subunit of CBF/NFY, allows formation of a protein-DNA complex with CBF-A and CBF-B and with yeast HAP2 and HAP3
-
Sinha S., Maity S.N., Lu J., de Crombrugghe B. Recombinant rat CBF-C, the third subunit of CBF/NFY, allows formation of a protein-DNA complex with CBF-A and CBF-B and with yeast HAP2 and HAP3. Proc. Natl. Acad. Sci. USA 1995, 92:1624-1628.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 1624-1628
-
-
Sinha, S.1
Maity, S.N.2
Lu, J.3
de Crombrugghe, B.4
-
41
-
-
84870058502
-
Facilitators and impediments of the pluripotency reprogramming factors' initial engagement with the genome
-
Soufi A., Donahue G., Zaret K.S. Facilitators and impediments of the pluripotency reprogramming factors' initial engagement with the genome. Cell 2012, 151:994-1004.
-
(2012)
Cell
, vol.151
, pp. 994-1004
-
-
Soufi, A.1
Donahue, G.2
Zaret, K.S.3
-
42
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
Su A.I., Wiltshire T., Batalov S., Lapp H., Ching K.A., Block D., Zhang J., Soden R., Hayakawa M., Kreiman G., et al. A gene atlas of the mouse and human protein-encoding transcriptomes. Proc. Natl. Acad. Sci. USA 2004, 101:6062-6067.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 6062-6067
-
-
Su, A.I.1
Wiltshire, T.2
Batalov, S.3
Lapp, H.4
Ching, K.A.5
Block, D.6
Zhang, J.7
Soden, R.8
Hayakawa, M.9
Kreiman, G.10
-
43
-
-
84869089058
-
Genome-wide nucleosome positioning during embryonic stem cell development
-
Teif V.B., Vainshtein Y., Caudron-Herger M., Mallm J.P., Marth C., Höfer T., Rippe K. Genome-wide nucleosome positioning during embryonic stem cell development. Nat. Struct. Mol. Biol. 2012, 19:1185-1192.
-
(2012)
Nat. Struct. Mol. Biol.
, vol.19
, pp. 1185-1192
-
-
Teif, V.B.1
Vainshtein, Y.2
Caudron-Herger, M.3
Mallm, J.P.4
Marth, C.5
Höfer, T.6
Rippe, K.7
-
44
-
-
17144395919
-
Chromatin immunoprecipitation (ChIP) on chip experiments uncover a widespread distribution of NF-Y binding CCAAT sites outside of core promoters
-
Testa A., Donati G., Yan P., Romani F., Huang T.H., Viganò M.A., Mantovani R. Chromatin immunoprecipitation (ChIP) on chip experiments uncover a widespread distribution of NF-Y binding CCAAT sites outside of core promoters. J. Biol. Chem. 2005, 280:13606-13615.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 13606-13615
-
-
Testa, A.1
Donati, G.2
Yan, P.3
Romani, F.4
Huang, T.H.5
Viganò, M.A.6
Mantovani, R.7
-
45
-
-
84655167578
-
A chromatin-modifying function of JNK during stem cell differentiation
-
Tiwari V.K., Stadler M.B., Wirbelauer C., Paro R., Schübeler D., Beisel C. A chromatin-modifying function of JNK during stem cell differentiation. Nat. Genet. 2012, 44:94-100.
-
(2012)
Nat. Genet.
, vol.44
, pp. 94-100
-
-
Tiwari, V.K.1
Stadler, M.B.2
Wirbelauer, C.3
Paro, R.4
Schübeler, D.5
Beisel, C.6
-
46
-
-
84899742411
-
INO80 facilitates pluripotency gene activation in embryonic stem cell self-renewal, reprogramming, and blastocyst development
-
Wang L., Du Y., Ward J.M., Shimbo T., Lackford B., Zheng X., Miao Y.L., Zhou B., Han L., Fargo D.C., et al. INO80 facilitates pluripotency gene activation in embryonic stem cell self-renewal, reprogramming, and blastocyst development. Cell Stem Cell 2014, 14:575-591.
-
(2014)
Cell Stem Cell
, vol.14
, pp. 575-591
-
-
Wang, L.1
Du, Y.2
Ward, J.M.3
Shimbo, T.4
Lackford, B.5
Zheng, X.6
Miao, Y.L.7
Zhou, B.8
Han, L.9
Fargo, D.C.10
-
47
-
-
84896842696
-
NF-Y inactivation causes atypical neurodegeneration characterized by ubiquitin and p62 accumulation and endoplasmic reticulum disorganization
-
Yamanaka T., Tosaki A., Kurosawa M., Matsumoto G., Koike M., Uchiyama Y., Maity S.N., Shimogori T., Hattori N., Nukina N. NF-Y inactivation causes atypical neurodegeneration characterized by ubiquitin and p62 accumulation and endoplasmic reticulum disorganization. Nat. Commun. 2014, 5:3354.
-
(2014)
Nat. Commun.
, vol.5
, pp. 3354
-
-
Yamanaka, T.1
Tosaki, A.2
Kurosawa, M.3
Matsumoto, G.4
Koike, M.5
Uchiyama, Y.6
Maity, S.N.7
Shimogori, T.8
Hattori, N.9
Nukina, N.10
-
48
-
-
30444443747
-
High-throughput screen for genes predominantly expressed in the ICM of mouse blastocysts by whole mount insitu hybridization
-
Yoshikawa T., Piao Y., Zhong J., Matoba R., Carter M.G., Wang Y., Goldberg I., Ko M.S. High-throughput screen for genes predominantly expressed in the ICM of mouse blastocysts by whole mount insitu hybridization. Gene Expr. Patterns 2006, 6:213-224.
-
(2006)
Gene Expr. Patterns
, vol.6
, pp. 213-224
-
-
Yoshikawa, T.1
Piao, Y.2
Zhong, J.3
Matoba, R.4
Carter, M.G.5
Wang, Y.6
Goldberg, I.7
Ko, M.S.8
-
49
-
-
80455144479
-
Pioneer transcription factors: establishing competence for gene expression
-
Zaret K.S., Carroll J.S. Pioneer transcription factors: establishing competence for gene expression. Genes Dev. 2011, 25:2227-2241.
-
(2011)
Genes Dev.
, vol.25
, pp. 2227-2241
-
-
Zaret, K.S.1
Carroll, J.S.2
-
50
-
-
84890432056
-
Chromatin connectivity maps reveal dynamic promoter-enhancer long-range associations
-
Zhang Y., Wong C.H., Birnbaum R.Y., Li G., Favaro R., Ngan C.Y., Lim J., Tai E., Poh H.M., Wong E., et al. Chromatin connectivity maps reveal dynamic promoter-enhancer long-range associations. Nature 2013, 504:306-310.
-
(2013)
Nature
, vol.504
, pp. 306-310
-
-
Zhang, Y.1
Wong, C.H.2
Birnbaum, R.Y.3
Li, G.4
Favaro, R.5
Ngan, C.Y.6
Lim, J.7
Tai, E.8
Poh, H.M.9
Wong, E.10
|