Genetic diversity among palestinian faba bean (vicia faba l.) ecotypes based on single nucleotide polymorphisms

European Journal of Horticultural Science

Volumn 79, Issue 6, 2014, Pages 301-305

  Basheer Salimia, R ^a   Camilli, B ^b,c   Scacchi, S ^c   Noli, E ^c   Awad, M ^a  

^a HEBRON UNIVERSITY   (Palestine)

^b Overseas Onlus ^*  (Italy)

^c UNIVERSITY OF BOLOGNA   (Italy)

Author keywords

Broad beans; Genetic fingerprinting; SNPs markers

Indexed keywords

VICIA FABA;

EID: 84915815548     PISSN: 16114434     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (37)

1. Ching, A., K.S. Caldwell, M. Jung, M. Dolan, O.S. Smith, S. Tingey, M. Morgante and A. Rafalski 2002: SNPs frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines BMC Genet, 3–19.
2. Consolandi, C., L. Palmieri, S. Doveri, E. Maestri, N. Marmiroli, S. Reale, D. Lee, L. Baldoni, N. Tosti, M. Severgnini, G. Bellis and B. Castiglioni 2007: Olive variety identification by ligation detection reaction in a universal array format. J Biotech. 129, 565–574.
3. Duc, G., S.Y. Bao, M. Baum, B. Redden, M. Sadiki, M.J. Suso, M. Vishniakova and X.X. Zong 2010: Diversity maintenance and use of Vicia faba L. genetic resources. Field Crops Res. 115, 270–278.
4. FAO 2010: Database of the Food and Agricultural Organization (FAO) of the United Nations. Available at [http://www.fao.org]. Rome.
5. Fourmann, M., P. Barret, N. Froger, C. Baron, F. Charlot, R. Delourme and D. Brunel 2002: From Arabidopsis thaliana to Brassica napus: Development of amplified consensus genetic markers (ACGM) for construction of a gene map. Theor. Appl. Genet. 105, 1196–1206.
6. Goodson, V.H. and F.W. Hawse 2002: Molecular evolution of the actin family. J. Cell Sci. 115, 2619–2622.
7. Gresta, F., G. Avola, E. Albertini and L. Raggi 2009: A study of variability in the Sicilian faba bean landraces ‘Larga di Leonforte’. Genet. Res. Crop Evol. 57, 523–553.
8. Hanelt, P., H. Shafer and J. Schultze-Motel 1972: Die Stellung von Vicia faba L. in der Gattung Vicia L. und Betrachtungen zur dieser Kulturart. Kulturpfl. 20, 263–275 (In German).
9. Hightower, C.R. and R.B. Meagher 1986: The molecular evolution of actin. Genetics. 114, 315–332.
10. Janben, M., C. Hunte, M. Schulz and H. Schnabl 1996: Tissue specification and intracellular distribution of actin isoforms in Vicia faba L. Protoplasma. 191,158–163.
11. Khlestkina E.K. and E.A. Salina 2006: SNP markers: methods of analysis, ways of development, and comparison on an example of common wheat. Genetica 42, 725–736.
12. Kost, B., J. Mathur and N.H. Chua 1999: Cytoskeleton in plant development. Curr. Opin. Plant Biol. 2, 462–470.
13. Kwon, S.J., H. Jinguo and J.C. Clarice 2010: Genetic diversity and relationship among faba bean (Vicia faba L.) germplasm entries as revealed by TRAP markers. Plant Genet. Resour. 8, 204–213.
14. Lanza, F., C. De La S alle, M.J. Baas, A. Schwartz, B. Boval, J.P. Cazenave and J.P. Caen 2002: A Leu7Pro mutation in the signal peptide of platelet glycoprotein (GP)IX in a case of Bernard-Soulier syndrome abolishes surface expression of the GPIb-V-IX complex. Br. J. Haematol. 118, 260–266.
15. Librado, P. and J. Rozas 2009: DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinform. 25, 1451–1452.
16. McDowell, J.M., S.R. Huang, E.C. McKinney, Y.Q. An and R.B. Meagher 1996: Structure and evolution of the actin gene family in Arabidopsis thaliana. Genetics 142, 587–602.
17. McKinney, E.C. and R.B. Meagher 1998: The Arabi-dopsis actin gene family members are widely dispersed in the genome. Genetics 149, 663–675.
18. Morley, M., C.M. Molony, T.M. Weber, J.L. Devlin, K.G. Ewens, R.S. Spielman and V.G. Cheung 2004: Genetic analysis of genome-wide variation in human gene expression. Nature 430, 733–734.
19. Nadal, S., M.J. Suso and M.T. Moreno 2003: Management of Vicia faba genetic resources: Changes associated to the selfing process in the major, equina and minor groups. Genet. Resour. Crop Evol. 50, 183–192.
20. Nei, M. 1987: Molecular Evolutionary Genetics Columbia University Press: New York, NY.
21. Rafalski, A. 2002: Applications of single nucleotide polymorphisms in crop genetics. Curr. Opin. Plant Biol. 5, 94–100.
22. Rostoks, N., S. Mudie, L. Cardle, J. Russell, L. Ramsay, A. Booth, J.T. Svensson, S.I. Wanamaker, H. Walia, E.M. Rodriguez, P.E. Hedley, H. Liu, J. Morris, T.J. Close, D.F. Marshal and R. Waugh 2005: Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Mol. Genet. Genomics 274, 515–527.
23. Schmid, K.J., T. Rosleff S oèrensen, R. Stracke, O. Toèrjeâk, T. A ltman, T. Mitchell-Olds and B. Weisshaar 2003: Large-scale identification and analysis of genome-wide single-nucleotide-polymorphisms for mapping in Arabi-dopsis thaliana. Genome Res. 13, 1250–1257.
24. Shirasawa, K., S. Shiokai, M. Yamaguchi, S. Kishitani and T. N ishio 2006: Dot-blot-SNP analysis for practical plant breeding and cultivar identification in rice. Theor. Appl. Genet. 113, 147–155.
25. Sneath, P.H.A. and R.R. Sokal 1973: Numerical Taxonomy. Freeman, San Francisco.
26. Strachan, T. and P. Read 2003: Human molecular genetic s, 3rd ed. Garland Science.
27. Tamura, K., J. Dudley, M. Nei and S. Kumar 2007: MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol. 24, 1596–1599.
28. Tanno, K. and G. Willcox 2006: The origins of cultivation of Cicer arietinum L. and Vicia faba L.: Early finds from Tell el-Kerkh, north-west Syria, late 10th millennium B.P. Veget. Hist. Archaeobot. 15, 197–204.
29. Terzopoulos, P.J and P.J. Bebeli 2008: Genetic diversity analysis of Mediterranean faba bean (Vicia faba L.) with ISSR markers. Field Crops Res. 108, 39–44.
30. Terzopoulos, P.J., Kaltsikes P.J., and P.J. Bebeli 2008: Determining the sources of heterogeneity in Greek faba bean local populations. Field Crops Res. 105, 124–130.
31. Torres, A.M., N.F. Weeden and A. Martin 1993: Linkage among isozyme, RFLP and RAPD markers in Vicia faba L. Theor. Appl. Genet. 85, 937–945.
32. Van De Ven, W.T., W. Powell, G. Ramsay and R. Waugh 1990: Restriction fragment length polymorphisms as genetic markers in Vicia. Heredity 65, 329–342.
33. Watterson, G.A. 1975: On the number of segregating sites in genetical models without recombination. Theor. Popul. Biol. 7, 256–276.
34. Zeid, M.A., C.C. Schön and W. Link 2003: Genetic diversity in recent elite faba bean lines using AFLP markers. Theor. Appl. Genet. 107, 1304–1314.
35. Zhu, Y.L., Q.J. Song, D.L. Hyten, C.P. Van Tassell, L.K. Matukumalli, D.R. Grimm, S.M. Hyatt, E.W. Fickus, N.D. Young and P.B. Cregan 2003: Single-nucleotide polymorphisms in soybean. Genetics 163, 1123–1134.
36. Zong, X., J. Ren, J.P. Guan, S. Wang, Q. Liu, J.G. Paull and R.J. Redden 2010: Molecular variation among Chinese and global germplasm in spring faba bean areas. Plant Breed. 129, 508–513.
37. Zong, X., X. Z. Liu, J.P. Guan, S. Wang, Q. Liu, J.G. Paull and R.J. Redden 2009: Molecular variation among Chinese and global winter faba bean germplasm. Theor. Appl. Genet. 118, 971–978.