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Volumn 5, Issue 5, 2014, Pages

Ball python nidovirus: A candidate etiologic agent for severe respiratory disease in Python regius

(12)  Stenglein, Mark D a   Jacobson, Elliott R b   Wozniak, Edward J c   Wellehan, James F X b   Kincaid, Anne d   Gordon, Marcus e   Porter, Brian F f   Baumgartner, Wes g   Stahl, Scott h   Kelley, Karen i   Towner, Jonathan S j   DeRisi, Joseph L a,k  


Author keywords

[No Author keywords available]

Indexed keywords

VIRUS RNA;

EID: 84908409035     PISSN: 21612129     EISSN: 21507511     Source Type: Journal    
DOI: 10.1128/mBio.01484-14     Document Type: Article
Times cited : (74)

References (88)
  • 2
    • 35648986721 scopus 로고    scopus 로고
    • Coronaviridae
    • Knipe DM, Howley PM (ed), 5th ed. Lippincott Williams & Wilkins, Philadelphia, PA
    • Lai MMC, Perlman S, Anderson LJ. 2007. Coronaviridae, p 1305-1335. In Knipe DM, Howley PM (ed), Fields virology, 5th ed. Lippincott Williams & Wilkins, Philadelphia, PA.
    • (2007) Fields virology , pp. 1305-1335
    • Lai, M.M.C.1    Perlman, S.2    Anderson, L.J.3
  • 3
    • 49049121501 scopus 로고    scopus 로고
    • Arteriviruses
    • Knipe DM, Howley PM (ed), 5th ed. Lippincott Williams & Wilkins, Philadelphia, PA
    • Snijder EJ, Spaan WJM. 2007. Arteriviruses, p 1337-1355. In Knipe DM, Howley PM (ed), Fields virology, 5th ed. Lippincott Williams & Wilkins, Philadelphia, PA.
    • (2007) Fields virology , pp. 1337-1355
    • Snijder, E.J.1    Spaan, W.J.M.2
  • 4
    • 84884170985 scopus 로고    scopus 로고
    • Arterivirus molecular biology and pathogenesis
    • Snijder EJ, Kikkert M, Fang Y. 2013. Arterivirus molecular biology and pathogenesis. J. Gen. Virol. 94:2141-2163. http://dx.doi.org/10.1099/ vir.0.056341-0.
    • (2013) J. Gen. Virol , vol.94 , pp. 2141-2163
    • Snijder, E.J.1    Kikkert, M.2    Fang, Y.3
  • 5
    • 84864441738 scopus 로고    scopus 로고
    • Mesoniviridae: A proposed new family in the order Nidovirales formed by a single species of mosquito-borne viruses
    • Lauber C, Ziebuhr J, Junglen S, Drosten C, Zirkel F, Nga PT, Morita K, Snijder EJ, Gorbalenya AE. 2012. Mesoniviridae: a proposed new family in the order Nidovirales formed by a single species of mosquito-borne viruses. Arch. Virol. 157:1623-1628. http://dx.doi.org/10.1007/s00705- 012-1295-x.
    • (2012) Arch. Virol , vol.157 , pp. 1623-1628
    • Lauber, C.1    Ziebuhr, J.2    Junglen, S.3    Drosten, C.4    Zirkel, F.5    Nga, P.T.6    Morita, K.7    Snijder, E.J.8    Gorbalenya, A.E.9
  • 6
    • 84888011629 scopus 로고    scopus 로고
    • A decade after SARS: Strat- egies for controlling emerging coronaviruses
    • Graham RL, Donaldson EF, Baric RS. 2013. A decade after SARS: strat- egies for controlling emerging coronaviruses. Nat. Rev. Microbiol. 11: 836-848. http://dx.doi.org/10.1038/nrmicro3143.
    • (2013) Nat. Rev. Microbiol , vol.11 , pp. 836-848
    • Graham, R.L.1    Donaldson, E.F.2    Baric, R.S.3
  • 7
    • 67349158649 scopus 로고    scopus 로고
    • Coronaviruses post-SARS: Update on replication and pathogenesis
    • Perlman S, Netland J. 2009. Coronaviruses post-SARS: update on replication and pathogenesis. Nat. Rev. Microbiol. 7:439 - 450. http:// dx.doi.org/10.1038/nrmicro2147.
    • (2009) Nat. Rev. Microbiol , vol.7 , pp. 439-450
    • Perlman, S.1    Netland, J.2
  • 8
    • 29144451985 scopus 로고    scopus 로고
    • Coronavirus pathogenesis and the emerging pathogen severe acute respiratory syndrome coronavirus
    • Weiss SR, Navas-Martin S. 2005. Coronavirus pathogenesis and the emerging pathogen severe acute respiratory syndrome coronavirus. Microbiol. Mol. Biol. Rev. 69:635- 664. http://dx.doi.org/10.1128/ MMBR.69.4.635-664.2005.
    • (2005) Microbiol. Mol. Biol. Rev , vol.69 , pp. 635-664
    • Weiss, S.R.1    Navas-Martin, S.2
  • 10
    • 33645093947 scopus 로고    scopus 로고
    • Nidovirales: Evolving the largest RNA virus genome
    • Gorbalenya AE, Enjuanes L, Ziebuhr J, Snijder EJ. 2006. Nidovirales: evolving the largest RNA virus genome. Virus Res. 117:17-37. http:// dx.doi.org/10.1016/j.virusres.2006.01.017.
    • (2006) Virus Res , vol.117 , pp. 17-37
    • Gorbalenya, A.E.1    Enjuanes, L.2    Ziebuhr, J.3    Snijder, E.J.4
  • 11
    • 84883438898 scopus 로고    scopus 로고
    • Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: Evidence for proofreading and potential therapeutics
    • Smith EC, Blanc H, Vignuzzi M, Denison MR. 2013. Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: evidence for proofreading and potential therapeutics. PLoS Pathog. 9:e1003565. http://dx.doi.org/10.1371/journal.ppat.1003565.
    • (2013) PLoS Pathog , vol.9
    • Smith, E.C.1    Blanc, H.2    Vignuzzi, M.3    Denison, M.R.4
  • 17
    • 0023139089 scopus 로고
    • Isolation of a reovirus from the snake, Python regius
    • Ahne W, Thomsen I, Winton J. 1987. Isolation of a reovirus from the snake, Python regius. Brief report. Arch. Virol. 94:135-139. http:// dx.doi.org/10.1007/BF01313731.
    • (1987) Brief report. Arch. Virol , vol.94 , pp. 135-139
    • Ahne, W.1    Thomsen, I.2    Winton, J.3
  • 18
    • 0032848446 scopus 로고    scopus 로고
    • Isolation and experimental transmission of a reovirus pathogenic in ratsnakes (Elaphe species)
    • Lamirande EW, Nichols DK, Owens JW, Gaskin JM, Jacobson ER. 1999. Isolation and experimental transmission of a reovirus pathogenic in ratsnakes (Elaphe species). Virus Res. 63:135-141. http://dx.doi.org/ 10.1016/S0168-1702(99)00067-2.
    • (1999) Virus Res , vol.63 , pp. 135-141
    • Lamirande, E.W.1    Nichols, D.K.2    Owens, J.W.3    Gaskin, J.M.4    Jacobson, E.R.5
  • 19
    • 84877128568 scopus 로고    scopus 로고
    • Selected emerging infectious diseases of Squamata
    • Latney LV, Wellehan J. 2013. Selected emerging infectious diseases of Squamata. Vet. Clin. North Am. Exot. Anim. Pract. 16:319-338. http:// dx.doi.org/10.1016/j.cvex.2013.01.003.
    • (2013) Vet. Clin. North Am. Exot. Anim. Pract , vol.16 , pp. 319-338
    • Latney, L.V.1    Wellehan, J.2
  • 22
    • 84883227372 scopus 로고    scopus 로고
    • PRICE: Software for the targeted assembly of components of (meta)genomic sequence data
    • Ruby JG, Bellare P, DeRisi JL. 2013. PRICE: software for the targeted assembly of components of (meta)genomic sequence data. G3 3:865-880. http://dx.doi.org/10.1534/g3.113.005967.
    • (2013) G3 , vol.3 , pp. 865-880
    • Ruby, J.G.1    Bellare, P.2    DeRisi, J.L.3
  • 23
    • 0017681196 scopus 로고
    • DNA sequencing with chainterminating inhibitors
    • Sanger F, Nicklen S, Coulson AR. 1977. DNA sequencing with chainterminating inhibitors. Proc. Natl. Acad. Sci. U. S. A. 74:5463-5467. http://dx.doi.org/10.1073/pnas.74.12.5463.
    • (1977) Proc. Natl. Acad. Sci. U. S. A , vol.74 , pp. 5463-5467
    • Sanger, F.1    Nicklen, S.2    Coulson, A.R.3
  • 24
    • 34548828779 scopus 로고    scopus 로고
    • 3= end cDNA amplification using classic RACE
    • Scotto-Lavino E, Du G, Frohman MA. 2006. 3= end cDNA amplification using classic RACE. Nat. Protoc. 1:2742-2745. http://dx.doi.org/10.1038/ nprot.2006.481.
    • (2006) Nat. Protoc , vol.1 , pp. 2742-2745
    • Scotto-Lavino, E.1    Du, G.2    Frohman, M.A.3
  • 25
    • 34548850026 scopus 로고    scopus 로고
    • 5= end cDNA amplification using classic RACE
    • Scotto-Lavino E, Du G, Frohman MA. 2006. 5= end cDNA amplification using classic RACE. Nat. Protoc. 1:2555-2562. http://dx.doi.org/10.1038/ nprot.2006.480.
    • (2006) Nat. Protoc , vol.1 , pp. 2555-2562
    • Scotto-Lavino, E.1    Du, G.2    Frohman, M.A.3
  • 26
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie
    • Langmead B, Salzberg SL. 2012. Fast gapped-read alignment with Bowtie Fast gapped-read alignment with Bowtie. Nat. Methods 9:357-359. http://dx.doi.org/10.1038/nmeth.1923.
    • (2012) Nat. Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 27
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • 1000 Genome Project Data Processing Subgroup
    • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R, 1000 Genome Project Data Processing Subgroup. 2009. The Sequence Alignment/Map format and SAMtools. Bioinformatics 25:2078 -2079. http://dx.doi.org/10.1093/bioinformatics/ btp352.
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3    Fennell, T.4    Ruan, J.5    Homer, N.6    Marth, G.7    Abecasis, G.8    Durbin, R.9
  • 28
    • 43249111857 scopus 로고    scopus 로고
    • Identification of a novel coronavirus from a Beluga whale by using a panviral microarray
    • Mihindukulasuriya KA, Wu G, St Leger J, Nordhausen RW, Wang D. 2008. Identification of a novel coronavirus from a Beluga whale by using a panviral microarray. J. Virol. 82:5084-5088. http://dx.doi.org/10.1128/ JVI.02722-07.
    • (2008) J. Virol , vol.82 , pp. 5084-5088
    • Mihindukulasuriya, K.A.1    Wu, G.2    St Leger, J.3    Nordhausen, R.W.4    Wang, D.5
  • 29
    • 5644246197 scopus 로고    scopus 로고
    • Coronavirus genome structure and replication
    • Brian DA, Baric RS. 2005. Coronavirus genome structure and replication. Curr. Top. Microbiol. Immunol. 287:1-30. http://dx.doi.org/ 10.1007/3-540-26765-4+1.
    • (2005) Curr. Top. Microbiol. Immunol , vol.287 , pp. 1-30
    • Brian, D.A.1    Baric, R.S.2
  • 31
    • 23144452044 scopus 로고    scopus 로고
    • The HHpred interactive server for protein homology detection and structure prediction
    • Söding J, Biegert A, Lupas AN. 2005. The HHpred interactive server for protein homology detection and structure prediction. Nucleic Acids Res. 33:W244-W248. http://dx.doi.org/10.1093/nar/gki162.
    • (2005) Nucleic Acids Res , vol.33 , pp. W244-W248
    • Söding, J.1    Biegert, A.2    Lupas, A.N.3
  • 32
    • 80055082271 scopus 로고    scopus 로고
    • Accelerated profile HMM searches
    • Eddy SR. 2011. Accelerated profile HMM searches. PLoS Comput. Biol. 7:e1002195. http://dx.doi.org/10.1371/journal.pcbi.1002195.
    • (2011) PLoS Comput. Biol , vol.7
    • Eddy, S.R.1
  • 33
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
    • Krogh A, Larsson B, von Heijne G, Sonnhammer EL. 2001. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305:567-580. http://dx.doi.org/ 10.1006/jmbi.2000.4315.
    • (2001) J. Mol. Biol , vol.305 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    von Heijne, G.3    Sonnhammer, E.L.4
  • 35
    • 42649091513 scopus 로고    scopus 로고
    • The role of programmed-1 ribosomal frameshifting in coronavirus propagation
    • Plant EP, Dinman JD. 2008. The role of programmed-1 ribosomal frameshifting in coronavirus propagation. Front. Biosci. 13:4873-4881. http:// dx.doi.org/10.2741/3046.
    • (2008) Front. Biosci , vol.13 , pp. 4873-4881
    • Plant, E.P.1    Dinman, J.D.2
  • 36
    • 84867620850 scopus 로고    scopus 로고
    • Mechanisms and implications of programmed translational frameshifting
    • Dinman JD. 2012. Mechanisms and implications of programmed translational frameshifting. Wiley Interdiscip. Rev. RNA 3:661-673. http:// dx.doi.org/10.1002/wrna.1126.
    • (2012) Wiley Interdiscip. Rev. RNA , vol.3 , pp. 661-673
    • Dinman, J.D.1
  • 37
    • 0034072633 scopus 로고    scopus 로고
    • Virus-encoded proteinases and proteolytic processing in the Nidovirales
    • Ziebuhr J, Snijder EJ, Gorbalenya AE. 2000. Virus-encoded proteinases and proteolytic processing in the Nidovirales. J. Gen. Virol. 81:853-879.
    • (2000) J. Gen. Virol , vol.81 , pp. 853-879
    • Ziebuhr, J.1    Snijder, E.J.2    Gorbalenya, A.E.3
  • 39
    • 5644288609 scopus 로고    scopus 로고
    • The coronavirus replicase
    • Ziebuhr J. 2005. The coronavirus replicase. Curr. Top. Microbiol. Immunol. 287:57-94. http://dx.doi.org/10.1007/3-540-26765-4+3.
    • (2005) Curr. Top. Microbiol. Immunol , vol.287 , pp. 57-94
    • Ziebuhr, J.1
  • 40
    • 84861148370 scopus 로고    scopus 로고
    • Genetic analysis of a novel nidovirus from fathead minnows
    • Batts WN, Goodwin AE, Winton JR. 2012. Genetic analysis of a novel nidovirus from fathead minnows. J. Gen. Virol. 93:1247-1252. http:// dx.doi.org/10.1099/vir.0.041210-0.
    • (2012) J. Gen. Virol , vol.93 , pp. 1247-1252
    • Batts, W.N.1    Goodwin, A.E.2    Winton, J.R.3
  • 44
    • 0033941814 scopus 로고    scopus 로고
    • The human coronavirus 229E superfamily 1 helicase has RNA and DNA duplex-unwinding activities with 5=-to-3= polarity
    • Seybert A, Hegyi A, Siddell SG, Ziebuhr J. 2000. The human coronavirus 229E superfamily 1 helicase has RNA and DNA duplex-unwinding activities with 5=-to-3= polarity. RNA 6:1056-1068. http://dx.doi.org/10.1017/ S1355838200000728.
    • (2000) RNA , vol.6 , pp. 1056-1068
    • Seybert, A.1    Hegyi, A.2    Siddell, S.G.3    Ziebuhr, J.4
  • 45
    • 62549159638 scopus 로고    scopus 로고
    • Functional screen reveals SARS coronavirus nonstructural protein nsp14 as a novel cap N7 methyltransferase
    • Chen Y, Cai H, Pan J, Xiang N, Tien P, Ahola T, Guo D. 2009. Functional screen reveals SARS coronavirus nonstructural protein nsp14 as a novel cap N7 methyltransferase. Proc. Natl. Acad. Sci. U. S. A. 106: 3484-3489. http://dx.doi.org/10.1073/pnas.0808790106.
    • (2009) Proc. Natl. Acad. Sci. U. S. A , vol.106 , pp. 3484-3489
    • Chen, Y.1    Cai, H.2    Pan, J.3    Xiang, N.4    Tien, P.5    Ahola, T.6    Guo, D.7
  • 48
    • 58149502555 scopus 로고    scopus 로고
    • Crystal structures of two coronavirus ADP-ribose-1==- monophosphatases and their complexes with ADP-ribose: A systematic structural analysis of the viral ADRP domain
    • Xu Y, Cong L, Chen C, Wei L, Zhao Q, Xu X, Ma Y, Bartlam M, Rao Z. 2009. Crystal structures of two coronavirus ADP-ribose-1==- monophosphatases and their complexes with ADP-ribose: a systematic structural analysis of the viral ADRP domain. J. Virol. 83:1083-1092. http://dx.doi.org/10.1128/JVI.01862-08.
    • (2009) J. Virol , vol.83 , pp. 1083-1092
    • Xu, Y.1    Cong, L.2    Chen, C.3    Wei, L.4    Zhao, Q.5    Xu, X.6    Ma, Y.7    Bartlam, M.8    Rao, Z.9
  • 49
    • 26444559529 scopus 로고    scopus 로고
    • ADPribose- 1== monophosphatase: A conserved coronavirus enzyme that is dispensable for viral replication in tissue culture
    • Putics Á, Filipowicz W, Hall J, Gorbalenya AE, Ziebuhr J. 2005. ADPribose- 1== monophosphatase: a conserved coronavirus enzyme that is dispensable for viral replication in tissue culture. J. Virol. 79:12721-12731. http://dx.doi.org/10.1128/JVI.79.20.12721-12731.2005.
    • (2005) J. Virol , vol.79 , pp. 12721-12731
    • Putics, Á.1    Filipowicz, W.2    Hall, J.3    Gorbalenya, A.E.4    Ziebuhr, J.5
  • 50
    • 79960372663 scopus 로고    scopus 로고
    • The ADP-ribose-1==- monophosphatase domains of severe acute respiratory syndrome coronavirus and human coronavirus 229E mediate resistance to antiviral interferon responses
    • Kuri T, Eriksson KK, Putics A, Züst R, Snijder EJ, Davidson AD, Siddell SG, Thiel V, Ziebuhr J, Weber F. 2011. The ADP-ribose-1==- monophosphatase domains of severe acute respiratory syndrome coronavirus and human coronavirus 229E mediate resistance to antiviral interferon responses. J. Gen. Virol. 92:1899-1905. http://dx.doi.org/10.1099/ vir.0.031856-0.
    • (2011) J. Gen. Virol , vol.92 , pp. 1899-1905
    • Kuri, T.1    Eriksson, K.K.2    Putics, A.3    Züst, R.4    Snijder, E.J.5    Davidson, A.D.6    Siddell, S.G.7    Thiel, V.8    Ziebuhr, J.9    Weber, F.10
  • 51
    • 46449100666 scopus 로고    scopus 로고
    • Viral membrane fusion
    • Harrison SC. 2008. Viral membrane fusion. Nat. Struct. Mol. Biol. 15: 690-698. http://dx.doi.org/10.1038/nsmb.1456.
    • (2008) Nat. Struct. Mol. Biol , vol.15 , pp. 690-698
    • Harrison, S.C.1
  • 52
    • 0042208243 scopus 로고    scopus 로고
    • The coronavirus spike protein is a class I virus fusion protein: Structural and functional characterization of the fusion core complex
    • Bosch BJ, van der Zee R, de Haan CAM, Rottier PJM. 2003. The coronavirus spike protein is a class I virus fusion protein: structural and functional characterization of the fusion core complex. J. Virol. 77: 8801-8811. http://dx.doi.org/10.1128/JVI.77.16.8801-8811.2003.
    • (2003) J. Virol , vol.77 , pp. 8801-8811
    • Bosch, B.J.1    van der Zee, R.2    de Haan, C.A.M.3    Rottier, P.J.M.4
  • 53
    • 58149487608 scopus 로고    scopus 로고
    • Comparative analysis of complete genome sequences of three avian coronaviruses reveals a novel group 3c coronavirus
    • Woo PC, Lau SK, Lam CS, Lai KK, Huang Y, Lee P, Luk GS, Dyrting KC, Chan KH, Yuen KY. 2009. Comparative analysis of complete genome sequences of three avian coronaviruses reveals a novel group 3c coronavirus. J. Virol. 83:908-917. http://dx.doi.org/10.1128/JVI.01977- 08.
    • (2009) J. Virol , vol.83 , pp. 908-917
    • Woo, P.C.1    Lau, S.K.2    Lam, C.S.3    Lai, K.K.4    Huang, Y.5    Lee, P.6    Luk, G.S.7    Dyrting, K.C.8    Chan, K.H.9    Yuen, K.Y.10
  • 54
    • 33744789955 scopus 로고    scopus 로고
    • Nidovirus transcription: How to make sense.? J
    • Pasternak AO, Spaan WJ, Snijder EJ. 2006. Nidovirus transcription: how to make sense.? J. Gen. Virol. 87:1403-1421. http://dx.doi.org/10.1099/ vir.0.81611-0.
    • (2006) Gen. Virol , vol.87 , pp. 1403-1421
    • Pasternak, A.O.1    Spaan, W.J.2    Snijder, E.J.3
  • 56
    • 0036317717 scopus 로고    scopus 로고
    • Identification and characterization of two closely related unclassifiable endogenous retroviruses in pythons (Python molurus and Python curtus)
    • Huder JB, Böni J, Hatt JM, Soldati G, Lutz H, Schüpbach J. 2002. Identification and characterization of two closely related unclassifiable endogenous retroviruses in pythons (Python molurus and Python curtus). J. Virol. 76:7607-7615. http://dx.doi.org/10.1128/JVI.76.15.7607- 7615.2002.
    • (2002) J. Virol , vol.76 , pp. 7607-7615
    • Huder, J.B.1    Böni, J.2    Hatt, J.M.3    Soldati, G.4    Lutz, H.5    Schüpbach, J.6
  • 57
    • 78651386377 scopus 로고    scopus 로고
    • Characterization of bafinivirus main protease autoprocessing activities
    • Ulferts R, Mettenleiter TC, Ziebuhr J. 2011. Characterization of bafinivirus main protease autoprocessing activities. J. Virol. 85:1348 -1359. http://dx.doi.org/10.1128/JVI.01716-10.
    • (2011) J. Virol , vol.85 , pp. 1348-1359
    • Ulferts, R.1    Mettenleiter, T.C.2    Ziebuhr, J.3
  • 58
    • 0032766857 scopus 로고    scopus 로고
    • Multiple comparisons of loglikelihoods with applications to phylogenetic inference
    • Shimodaira H, Hasegawa M. 1999. Multiple comparisons of loglikelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16:1114. http://dx.doi.org/10.1093/oxfordjournals.molbev.a026201.
    • (1999) Mol. Biol. Evol , vol.16 , pp. 1114
    • Shimodaira, H.1    Hasegawa, M.2
  • 59
    • 84865704283 scopus 로고    scopus 로고
    • Identification, characterization, and in vitro culture of highly divergent arenaviruses from boa constrictors and annulated tree boas: Candidate etiological agents for snake inclusion body disease
    • Stenglein MD, Sanders C, Kistler AL, Ruby JG, Franco JY, Reavill DR, Dunker F, Derisi JL. 2012. Identification, characterization, and in vitro culture of highly divergent arenaviruses from boa constrictors and annulated tree boas: candidate etiological agents for snake inclusion body disease. mBio 3(4):e00180-12. http://dx.doi.org/10.1128/mBio.00180-12.
    • (2012) mBio , vol.3 , Issue.4
    • Stenglein, M.D.1    Sanders, C.2    Kistler, A.L.3    Ruby, J.G.4    Franco, J.Y.5    Reavill, D.R.6    Dunker, F.7    Derisi, J.L.8
  • 60
    • 0015791911 scopus 로고
    • Comparative characterization of a C-type virus-producing cell line (VSW) and a virus-free cell line (VH2) from Vipera russelli
    • Clark HF, Cohen MM, Lunger PD. 1973. Comparative characterization of a C-type virus-producing cell line (VSW) and a virus-free cell line (VH2) from Vipera russelli. J. Natl. Cancer Inst. 51:645-657.
    • (1973) J. Natl. Cancer Inst , vol.51 , pp. 645-657
    • Clark, H.F.1    Cohen, M.M.2    Lunger, P.D.3
  • 63
    • 0344304518 scopus 로고    scopus 로고
    • A comparative sequence analysis to revise the current taxonomy of the family Coronaviridae
    • González JM, Gomez-Puertas P, Cavanagh D, Gorbalenya AE, Enjuanes L. 2003. A comparative sequence analysis to revise the current taxonomy of the family Coronaviridae. Arch. Virol. 148:2207-2235. http:// dx.doi.org/10.1007/s00705-003-0162-1.
    • (2003) Arch. Virol , vol.148 , pp. 2207-2235
    • González, J.M.1    Gomez-Puertas, P.2    Cavanagh, D.3    Gorbalenya, A.E.4    Enjuanes, L.5
  • 64
    • 19044400807 scopus 로고    scopus 로고
    • Molecular phylogeny of the Carnivora (Mammalia): Assessing the impact of increased sampling on resolving enigmatic relationships
    • Flynn JJ, Finarelli JA, Zehr S, Hsu J, Nedbal MA. 2005. Molecular phylogeny of the Carnivora (Mammalia): assessing the impact of increased sampling on resolving enigmatic relationships. Syst. Biol. 54: 317-337. http://dx.doi.org/10.1080/10635150590923326.
    • (2005) Syst. Biol , vol.54 , pp. 317-337
    • Flynn, J.J.1    Finarelli, J.A.2    Zehr, S.3    Hsu, J.4    Nedbal, M.A.5
  • 65
    • 34247626400 scopus 로고    scopus 로고
    • Dog as an outgroup to human and mouse
    • Lunter G. 2007. Dog as an outgroup to human and mouse. PLoS Comput. Biol. 3:e74. http://dx.doi.org/10.1371/journal.pcbi.0030074.
    • (2007) PLoS Comput. Biol , vol.3
    • Lunter, G.1
  • 66
    • 0023392901 scopus 로고
    • Acquisition of Salmonella flora by turtle hatchlings on commercial turtle farms
    • Izadjoo MJ, Pantoja CO, Siebeling RJ. 1987. Acquisition of Salmonella flora by turtle hatchlings on commercial turtle farms. Can. J. Microbiol. 33:718-724. http://dx.doi.org/10.1139/m87-125.
    • (1987) Can. J. Microbiol , vol.33 , pp. 718-724
    • Izadjoo, M.J.1    Pantoja, C.O.2    Siebeling, R.J.3
  • 67
    • 13244290163 scopus 로고    scopus 로고
    • Absence of detectable Salmonella cloacal shedding in free-living reptiles on admission to the wildlife center of Virginia
    • Richards JM, Brown JD, Kelly TR, Fountain AL, Sleeman JM. 2004. Absence of detectable Salmonella cloacal shedding in free-living reptiles on admission to the wildlife center of Virginia. J. Zoo Wildl. Med. 35: 562-563. http://dx.doi.org/10.1638/03-070.
    • (2004) J. Zoo Wildl. Med , vol.35 , pp. 562-563
    • Richards, J.M.1    Brown, J.D.2    Kelly, T.R.3    Fountain, A.L.4    Sleeman, J.M.5
  • 68
    • 33746084860 scopus 로고    scopus 로고
    • Prevalence of Salmonella spp. in cloacal, fecal, and gastrointestinal mucosal samples from wild North American turtles
    • Saelinger CA, Lewbart GA, Christian LS, Lemons CL. 2006. Prevalence of Salmonella spp. in cloacal, fecal, and gastrointestinal mucosal samples from wild North American turtles. J. Am. Vet. Med. Assoc. 229:266-268. http://dx.doi.org/10.2460/javma.229.2.266.
    • (2006) J. Am. Vet. Med. Assoc , vol.229 , pp. 266-268
    • Saelinger, C.A.1    Lewbart, G.A.2    Christian, L.S.3    Lemons, C.L.4
  • 70
    • 84865366233 scopus 로고    scopus 로고
    • Isolation and molecular identification of Sunshine virus, a novel paramyxovirus found in Australian snakes
    • Hyndman TH, Marschang RE, Wellehan JF, Jr, Nicholls PK. 2012. Isolation and molecular identification of Sunshine virus, a novel paramyxovirus found in Australian snakes. Infect. Genet. Evol. 12: 1436-1446. http://dx.doi.org/10.1016/j.meegid.2012.04.022.
    • (2012) Infect. Genet. Evol , vol.12 , pp. 1436-1446
    • Hyndman, T.H.1    Marschang, R.E.2    Wellehan, J.F.3    Nicholls, P.K.4
  • 71
    • 69249202276 scopus 로고    scopus 로고
    • Comparison of paramyxovirus isolates from snakes, lizards and a tortoise
    • Marschang RE, Papp T, Frost JW. 2009. Comparison of paramyxovirus isolates from snakes, lizards and a tortoise. Virus Res. 144:272-279. http:// dx.doi.org/10.1016/j.virusres.2009.05.011.
    • (2009) Virus Res , vol.144 , pp. 272-279
    • Marschang, R.E.1    Papp, T.2    Frost, J.W.3
  • 72
    • 84862514781 scopus 로고    scopus 로고
    • Initial sequence characterization of the rhabdoviruses of squamate reptiles, including a novel rhabdovirus from a caiman lizard (Dracaena guianensis)
    • Wellehan JF, Jr, Pessier AP, Archer LL, Childress AL, Jacobson ER, Tesh RB. 2012. Initial sequence characterization of the rhabdoviruses of squamate reptiles, including a novel rhabdovirus from a caiman lizard (Dracaena guianensis). Vet. Microbiol. 158:274-279. http://dx.doi.org/ 10.1016/j.vetmic.2012.02.020.
    • (2012) Vet. Microbiol , vol.158 , pp. 274-279
    • Wellehan, J.F.1    Pessier, A.P.2    Archer, L.L.3    Childress, A.L.4    Jacobson, E.R.5    Tesh, R.B.6
  • 75
    • 78650575820 scopus 로고    scopus 로고
    • Detection of all known filovirus species by reverse transcription-polymerase chain reaction using a primer set specific for the viral nucleoprotein gene
    • Ogawa H, Miyamoto H, Ebihara H, Ito K, Morikawa S, Feldmann H, Takada A. 2011. Detection of all known filovirus species by reverse transcription-polymerase chain reaction using a primer set specific for the viral nucleoprotein gene. J. Virol. Methods 171:310 -313. http:// dx.doi.org/10.1016/j.jviromet.2010.11.010.
    • (2011) J. Virol. Methods , vol.171 , pp. 310-313
    • Ogawa, H.1    Miyamoto, H.2    Ebihara, H.3    Ito, K.4    Morikawa, S.5    Feldmann, H.6    Takada, A.7
  • 77
    • 33745634395 scopus 로고    scopus 로고
    • Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
    • Li W, Godzik A. 2006. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics Oxf. Engl. 22:1658-1659. http://dx.doi.org/10.1093/bioinformatics/btl158.
    • (2006) Bioinformatics Oxf. Engl , vol.22 , pp. 1658-1659
    • Li, W.1    Godzik, A.2
  • 78
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on theWWWfor general users and for biologist programmers
    • Rozen S, Skaletsky H. 2000. Primer3 on theWWWfor general users and for biologist programmers. Methods Mol. Biol. 132:365-386.
    • (2000) Methods Mol. Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 79
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl MW. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29:e45. http://dx.doi.org/10.1093/ nar/29.9.e45.
    • (2001) Nucleic Acids Res , vol.29
    • Pfaffl, M.W.1
  • 80
    • 45949107473 scopus 로고    scopus 로고
    • Recent developments in the MAFFT multiple sequence alignment program
    • Katoh K, Toh H. 2008. Recent developments in the MAFFT multiple sequence alignment program. Brief. Bioinform. 9:286 -298. http:// dx.doi.org/10.1093/bib/bbn013.
    • (2008) Brief. Bioinform , vol.9 , pp. 286-298
    • Katoh, K.1    Toh, H.2
  • 81
    • 79954529507 scopus 로고    scopus 로고
    • ProtTest 3: Fast selection of best-fit models of protein evolution
    • Darriba D, Taboada GL, Doallo R, Posada D. 2011. ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 27: 1164-1165. http://dx.doi.org/10.1093/bioinformatics/btr088.
    • (2011) Bioinformatics , vol.27 , pp. 1164-1165
    • Darriba, D.1    Taboada, G.L.2    Doallo, R.3    Posada, D.4
  • 82
    • 45849154166 scopus 로고    scopus 로고
    • An improved general amino acid replacement matrix
    • Le SQ, Gascuel O. 2008. An improved general amino acid replacement matrix. Mol. Biol. Evol. 25:1307-1320. http://dx.doi.org/10.1093/molbev/ msn067.
    • (2008) Mol. Biol. Evol , vol.25 , pp. 1307-1320
    • Le, S.Q.1    Gascuel, O.2
  • 83
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: Selection of best-fit models of protein evolution
    • Abascal F, Zardoya R, Posada D. 2005. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21:2104 -2105. http:// dx.doi.org/10.1093/bioinformatics/bti263.
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 84
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574. http:// dx.doi.org/10.1093/bioinformatics/btg180.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 85
    • 78751558547 scopus 로고    scopus 로고
    • Creating the CIPRES science gateway for inference of large phylogenetic trees
    • Institute of Electrical and Electronics Engineers, Piscataway, NJ
    • Miller M, Pfeiffer W, Schwartz T. 2010. Creating the CIPRES science gateway for inference of large phylogenetic trees, p 11572-8. In Proceedings of the Gateway Computing Environments Workshop (GCE). Institute of Electrical and Electronics Engineers, Piscataway, NJ. http:// dx.doi.org/10.1109/GCE.2010.5676129.
    • (2010) Proceedings of the Gateway Computing Environments Workshop (GCE) , pp. 11572-11578
    • Miller, M.1    Pfeiffer, W.2    Schwartz, T.3
  • 86
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML Web servers
    • Stamatakis A, Hoover P, Rougemont J. 2008. A rapid bootstrap algorithm for the RAxML Web servers. Syst. Biol. 57:758 -771. http:// dx.doi.org/10.1080/10635150802429642.
    • (2008) Syst. Biol , vol.57 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 87
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783. http://dx.doi.org/10.2307/2408678.
    • (1985) Evolution , vol.39 , pp. 783
    • Felsenstein, J.1


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